LOC440292 8611

Name: LOC440292	Sequence: fasta or formatted (456aa)		NCBI GI: 169209261
Description: PREDICTED: similar to hCG1731366		Referenced in: Additional Interaction Domain Families
Other entries for this name: alt prot [344aa] PREDICTED: similar to COMM domain containing 4 alt prot [344aa] PREDICTED: similar to hCG1731366
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.0 41 2 C cysteine 3.3 15 2 D aspartate 4.6 21 1 E glutamate 4.6 21 2 F phenylalanine 2.4 11 1 G glycine 8.6 39 2 H histidine 3.9 18 1 I isoleucine 2.4 11 1 K lysine 5.7 26 2 L leucine 12.1 55 4 M methionine 1.8 8 2 N asparagine 0.4 2 1 P proline 7.7 35 2 Q glutamine 3.9 18 2 R arginine 5.7 26 6 S serine 9.4 43 2 T threonine 5.7 26 1 V valine 5.3 24 1 W tryptophan 2.6 12 1 Y tyrosine 0.9 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to hCG1731366 LOC440292 0.610 PREDICTED: similar to COMM domain containing 4 [Hom... LOC440292 0.608 PREDICTED: similar to hCG1731366 LOC646670 0.263 PREDICTED: similar to COMM domain containing 4 [Hom... LOC646670 0.249 PREDICTED: similar to COMM domain containing 4 [Hom... COMMD4 0.235 COMM domain containing 4 ZP3 0.015 zona pellucida glycoprotein 3 isoform 1 precursor [... ZP3 0.015 zona pellucida glycoprotein 3 isoform 2 LOC100131283 0.011 PREDICTED: hypothetical protein LOC100131283 0.011 PREDICTED: hypothetical protein LOC100131283 0.011 PREDICTED: hypothetical protein FOXQ1 0.008 forkhead box Q1 LOC100290649 0.008 PREDICTED: hypothetical protein XP_002348220 LOC100289318 0.008 PREDICTED: hypothetical protein XP_002343871 COMMD10 0.007 COMM domain containing 10 LOC441009 0.007 PREDICTED: hypothetical protein LOC441009 0.007 PREDICTED: hypothetical protein LOC441009 0.007 PREDICTED: hypothetical protein NKX1-1 0.005 PREDICTED: NK1 homeobox 1 C2orf55 0.005 hypothetical protein LOC343990 UBE4B 0.005 ubiquitination factor E4B isoform 2 UBE4B 0.005 ubiquitination factor E4B isoform 1 TUBGCP6 0.005 tubulin, gamma complex associated protein 6 LOC100292513 0.005 PREDICTED: hypothetical protein LOC100290082 0.005 PREDICTED: hypothetical protein XP_002347925 LOC100287331 0.005 PREDICTED: hypothetical protein XP_002344192 SPI1 0.005 hematopoietic transcription factor PU.1 isoform 1 [... SPI1 0.005 hematopoietic transcription factor PU.1 isoform 2 [... CLASP2 0.005 CLIP-associating protein 2 C19orf29 0.005 chromosome 19 open reading frame 29 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.