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Search of human proteins with 169169009
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169169009 PREDICTED: hypothetical protein [Homo sapiens]
(230 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169169009 PREDICTED: hypothetical protein [Homo sapiens] 479 e-136
gi|85815829 SH3-domain binding protein 1 [Homo sapiens] 40 0.002
gi|239753721 PREDICTED: hypothetical protein [Homo sapiens] 39 0.005
gi|239748254 PREDICTED: hypothetical protein XP_002346600 [Homo ... 39 0.005
gi|239742155 PREDICTED: hypothetical protein XP_002342442 [Homo ... 39 0.005
gi|18079216 CASK interacting protein 1 [Homo sapiens] 37 0.018
gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens] 37 0.018
gi|149158696 HLA-B associated transcript-3 isoform b [Homo sapiens] 36 0.024
gi|18375632 HLA-B associated transcript-3 isoform b [Homo sapiens] 36 0.024
gi|18375630 HLA-B associated transcript-3 isoform b [Homo sapiens] 36 0.024
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 36 0.032
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 36 0.032
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 36 0.032
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 36 0.032
gi|239746104 PREDICTED: hypothetical protein XP_002344198 [Homo ... 36 0.032
gi|239754626 PREDICTED: hypothetical protein [Homo sapiens] 35 0.054
gi|223972704 hypothetical protein LOC284418 [Homo sapiens] 35 0.070
gi|224493919 zinc finger and SCAN domain containing 18 isoform 2... 34 0.092
gi|224493912 zinc finger and SCAN domain containing 18 isoform 3... 34 0.092
gi|226371704 zinc finger and SCAN domain containing 18 isoform 3... 34 0.092
gi|21536413 bridging integrator 1 isoform 7 [Homo sapiens] 34 0.092
gi|21536404 bridging integrator 1 isoform 3 [Homo sapiens] 34 0.092
gi|224493905 zinc finger and SCAN domain containing 18 isoform 1... 34 0.092
gi|30795231 brain abundant, membrane attached signal protein 1 [... 34 0.12
gi|239753975 PREDICTED: hypothetical protein [Homo sapiens] 34 0.12
gi|51173735 ras responsive element binding protein 1 isoform 2 [... 34 0.12
gi|51173737 ras responsive element binding protein 1 isoform 1 [... 34 0.12
gi|17511435 roundabout homolog 4, magic roundabout [Homo sapiens] 34 0.12
gi|87239981 tankyrase, TRF1-interacting ankyrin-related ADP-ribo... 34 0.12
gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens] 34 0.12
>gi|169169009 PREDICTED: hypothetical protein [Homo sapiens]
Length = 230
Score = 479 bits (1233), Expect = e-136
Identities = 230/230 (100%), Positives = 230/230 (100%)
Query: 1 MDRYSLTAAFFPYSPWSTLSALGPRENPSPASAGFAKKLRKLTPNSEGGKHKTLNFLKMG 60
MDRYSLTAAFFPYSPWSTLSALGPRENPSPASAGFAKKLRKLTPNSEGGKHKTLNFLKMG
Sbjct: 1 MDRYSLTAAFFPYSPWSTLSALGPRENPSPASAGFAKKLRKLTPNSEGGKHKTLNFLKMG 60
Query: 61 SCFHSHVGIKGKPMGTLFRRDVPVQTHAITLIHTHNSHTQRPWEPTPGSAAPANTLEKQN 120
SCFHSHVGIKGKPMGTLFRRDVPVQTHAITLIHTHNSHTQRPWEPTPGSAAPANTLEKQN
Sbjct: 61 SCFHSHVGIKGKPMGTLFRRDVPVQTHAITLIHTHNSHTQRPWEPTPGSAAPANTLEKQN 120
Query: 121 RQPAELLPPQAPRGMLKKAEGEKCGSPAERAPRGPGPKTGSARAGRTYSEDPRAPALPQP 180
RQPAELLPPQAPRGMLKKAEGEKCGSPAERAPRGPGPKTGSARAGRTYSEDPRAPALPQP
Sbjct: 121 RQPAELLPPQAPRGMLKKAEGEKCGSPAERAPRGPGPKTGSARAGRTYSEDPRAPALPQP 180
Query: 181 ETTKMQISLDLDRKRLCMRLMRGLSIQYGSWTLYASDLRYSRRGANLGCV 230
ETTKMQISLDLDRKRLCMRLMRGLSIQYGSWTLYASDLRYSRRGANLGCV
Sbjct: 181 ETTKMQISLDLDRKRLCMRLMRGLSIQYGSWTLYASDLRYSRRGANLGCV 230
>gi|85815829 SH3-domain binding protein 1 [Homo sapiens]
Length = 701
Score = 40.0 bits (92), Expect = 0.002
Identities = 30/104 (28%), Positives = 40/104 (38%), Gaps = 10/104 (9%)
Query: 83 PVQTHAITLIHTHNSHTQRPWEPT-----PGSAAPANTLEKQNRQPAELLPPQAPRGMLK 137
P A T T + RP P P +AAP + ++ ++PA P P
Sbjct: 523 PALASAATKERTESEVPPRPASPKVTRSPPETAAPVEDMARRTKRPAPARPTMPP----P 578
Query: 138 KAEGEKCGSPAERAPRGPG-PKTGSARAGRTYSEDPRAPALPQP 180
+ G + PA P G G P T A R RAP +P P
Sbjct: 579 QVSGSRSSPPAPPLPPGSGSPGTPQALPRRLVGSSLRAPTVPPP 622
>gi|239753721 PREDICTED: hypothetical protein [Homo sapiens]
Length = 342
Score = 38.5 bits (88), Expect = 0.005
Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 14/83 (16%)
Query: 103 WEPTPGS-----AAPANTLEKQNRQPAELLPPQAP-RGMLKKAEGEKCGSPAERAPRGPG 156
W P P + AAP T E + P +L P +P G ++A C +PA R P P
Sbjct: 158 WSPAPKAGSPMAAAPGRTCEGKRTAPRRMLLPDSPYAGRPQRARTSLCAAPASRRP--PA 215
Query: 157 PKTGSARAGRTYSEDPRAPALPQ 179
P + R T PALP+
Sbjct: 216 PTVAAPRGLET------RPALPR 232
>gi|239748254 PREDICTED: hypothetical protein XP_002346600 [Homo
sapiens]
Length = 342
Score = 38.5 bits (88), Expect = 0.005
Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 14/83 (16%)
Query: 103 WEPTPGS-----AAPANTLEKQNRQPAELLPPQAP-RGMLKKAEGEKCGSPAERAPRGPG 156
W P P + AAP T E + P +L P +P G ++A C +PA R P P
Sbjct: 158 WSPAPKAGSPMAAAPGRTCEGKRTAPRRMLLPDSPYAGRPQRARTSLCAAPASRRP--PA 215
Query: 157 PKTGSARAGRTYSEDPRAPALPQ 179
P + R T PALP+
Sbjct: 216 PTVAAPRGLET------RPALPR 232
>gi|239742155 PREDICTED: hypothetical protein XP_002342442 [Homo
sapiens]
Length = 342
Score = 38.5 bits (88), Expect = 0.005
Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 14/83 (16%)
Query: 103 WEPTPGS-----AAPANTLEKQNRQPAELLPPQAP-RGMLKKAEGEKCGSPAERAPRGPG 156
W P P + AAP T E + P +L P +P G ++A C +PA R P P
Sbjct: 158 WSPAPKAGSPMAAAPGRTCEGKRTAPRRMLLPDSPYAGRPQRARTSLCAAPASRRP--PA 215
Query: 157 PKTGSARAGRTYSEDPRAPALPQ 179
P + R T PALP+
Sbjct: 216 PTVAAPRGLET------RPALPR 232
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 36.6 bits (83), Expect = 0.018
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 102 PWEPTPGSAA---PANTLEKQNRQPAELLPPQAPRGMLKKAEGEKCGSPAERAPRGPGPK 158
P EP P A P E + R+PA+ PP +P+ +L + + GSP + + P P
Sbjct: 1197 PAEPPPTDLAHLPPLPPPEGEARKPAK--PPVSPKPVLTQPVPKLQGSPTPTSKKVPLPG 1254
Query: 159 TGSARAGRTYSEDPRAPALPQPETT 183
GS R + P P P T
Sbjct: 1255 PGSPEVKRAHGTPPPVSPKPPPPPT 1279
>gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens]
Length = 1860
Score = 36.6 bits (83), Expect = 0.018
Identities = 30/119 (25%), Positives = 44/119 (36%), Gaps = 3/119 (2%)
Query: 72 KPMGTLFRRDVPVQTHAITLIHTHNS-HTQRPWEPTPGSAAPANTLEKQNRQPAELLPPQ 130
KP+ TL R + + +HA S H P+ S AP + R PA ++PP
Sbjct: 452 KPIPTLARTEAKITSHASKPASARTSTHKPPPFTALSSSPAPTPGSTRSTRPPATMVPPT 511
Query: 131 APRGMLKKAEGEKCGSPAERAPRGPGPKTGSARAGRTYSEDPRAPALPQPETTKMQISL 189
+ + A A + P S +AG S PR P +P + L
Sbjct: 512 SGTSTPRTAPAVPTPGSAPTGSKKPIGSEASKKAGPKSS--PRKPVPLRPGKAARDVPL 568
>gi|149158696 HLA-B associated transcript-3 isoform b [Homo sapiens]
Length = 1126
Score = 36.2 bits (82), Expect = 0.024
Identities = 38/140 (27%), Positives = 56/140 (40%), Gaps = 21/140 (15%)
Query: 53 TLNFLKMGSCFHSHVGIKGKPMGTLFRRDVPVQTHAITLIHT-----------HNSHTQR 101
T N GS H+ ++ P+ + R + + H I I T H+Q
Sbjct: 137 TFNLPSDGSAVDVHINMEQAPIQSEPRVRLVMAQHMIRDIQTLLSRMECRGGPQPQHSQP 196
Query: 102 PWEPTPGSAAPANTLEKQNRQPAEL-LPPQAPRGMLKKAEGEKCGSPAERAPRGPGPKTG 160
P +P + P L Q +P E PP+ P +AE + +PA+ PGP
Sbjct: 197 PPQPPAVTPEPV-ALSSQTSEPVESEAPPREP----MEAEEVEERAPAQNPELTPGP--- 248
Query: 161 SARAGRTYSEDPRAPALPQP 180
A AG T + + AP P P
Sbjct: 249 -APAGPTPAPETNAPNHPSP 267
>gi|18375632 HLA-B associated transcript-3 isoform b [Homo sapiens]
Length = 1126
Score = 36.2 bits (82), Expect = 0.024
Identities = 38/140 (27%), Positives = 56/140 (40%), Gaps = 21/140 (15%)
Query: 53 TLNFLKMGSCFHSHVGIKGKPMGTLFRRDVPVQTHAITLIHT-----------HNSHTQR 101
T N GS H+ ++ P+ + R + + H I I T H+Q
Sbjct: 137 TFNLPSDGSAVDVHINMEQAPIQSEPRVRLVMAQHMIRDIQTLLSRMECRGGPQPQHSQP 196
Query: 102 PWEPTPGSAAPANTLEKQNRQPAEL-LPPQAPRGMLKKAEGEKCGSPAERAPRGPGPKTG 160
P +P + P L Q +P E PP+ P +AE + +PA+ PGP
Sbjct: 197 PPQPPAVTPEPV-ALSSQTSEPVESEAPPREP----MEAEEVEERAPAQNPELTPGP--- 248
Query: 161 SARAGRTYSEDPRAPALPQP 180
A AG T + + AP P P
Sbjct: 249 -APAGPTPAPETNAPNHPSP 267
>gi|18375630 HLA-B associated transcript-3 isoform b [Homo sapiens]
Length = 1126
Score = 36.2 bits (82), Expect = 0.024
Identities = 38/140 (27%), Positives = 56/140 (40%), Gaps = 21/140 (15%)
Query: 53 TLNFLKMGSCFHSHVGIKGKPMGTLFRRDVPVQTHAITLIHT-----------HNSHTQR 101
T N GS H+ ++ P+ + R + + H I I T H+Q
Sbjct: 137 TFNLPSDGSAVDVHINMEQAPIQSEPRVRLVMAQHMIRDIQTLLSRMECRGGPQPQHSQP 196
Query: 102 PWEPTPGSAAPANTLEKQNRQPAEL-LPPQAPRGMLKKAEGEKCGSPAERAPRGPGPKTG 160
P +P + P L Q +P E PP+ P +AE + +PA+ PGP
Sbjct: 197 PPQPPAVTPEPV-ALSSQTSEPVESEAPPREP----MEAEEVEERAPAQNPELTPGP--- 248
Query: 161 SARAGRTYSEDPRAPALPQP 180
A AG T + + AP P P
Sbjct: 249 -APAGPTPAPETNAPNHPSP 267
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 35.8 bits (81), Expect = 0.032
Identities = 25/83 (30%), Positives = 29/83 (34%), Gaps = 4/83 (4%)
Query: 102 PWEPTPGSAAPANTLEKQNRQPAELLPPQAPRGMLKKAEGEKCGSPAERAPRGPGPKTGS 161
P EPTP + A T K+ P P+ E PA P+ P P T
Sbjct: 229 PKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKE----PAPTTPKEPAPTTTK 284
Query: 162 ARAGRTYSEDPRAPALPQPETTK 184
A T P P P P T K
Sbjct: 285 EPAPTTTKSAPTTPKEPAPTTPK 307
Score = 34.3 bits (77), Expect = 0.092
Identities = 26/95 (27%), Positives = 35/95 (36%), Gaps = 12/95 (12%)
Query: 102 PWEPTPGSAAPANTLEKQN-----RQPAELLPPQAPRGMLKKAEGEKCGSPAERAPRGPG 156
P EP P + PA T K+ ++PA P + K+ P+ P+ P
Sbjct: 330 PKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPA 389
Query: 157 PKTGSAR-------AGRTYSEDPRAPALPQPETTK 184
P T + A T P P P P TTK
Sbjct: 390 PTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTK 424
Score = 33.5 bits (75), Expect = 0.16
Identities = 22/78 (28%), Positives = 28/78 (35%), Gaps = 4/78 (5%)
Query: 106 TPGSAAPANTLEKQNRQPAELLPPQAPRGMLKKAEGEKCGSPAERAPRGPGPKTGSARAG 165
TP AP E P + P + K+ C PA P+G P T A
Sbjct: 574 TPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAP 633
Query: 166 RTYSEDPRAPALPQPETT 183
T P+ PA P+ T
Sbjct: 634 TT----PKEPAPTTPKGT 647
Score = 31.6 bits (70), Expect = 0.59
Identities = 28/98 (28%), Positives = 32/98 (32%), Gaps = 12/98 (12%)
Query: 99 TQRPWEPTPGSAAPANTLEKQNRQPAELLP-------PQAPRGMLKKAEGEKCGS----P 147
T++P TP AP E P +L P P P E + P
Sbjct: 463 TKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEP 522
Query: 148 AERAPRGPGPKTGSARAGRTYSED-PRAPALPQPETTK 184
P P P T A A T E P P P P T K
Sbjct: 523 TPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPK 560
Score = 30.4 bits (67), Expect = 1.3
Identities = 24/85 (28%), Positives = 32/85 (37%), Gaps = 9/85 (10%)
Query: 104 EPTPGSAAPANTLEKQ-----NRQPAELLPPQAPRGMLKKAEGEKCGSPAERAPRGPGPK 158
EP P + A T K+ ++PA P + KK PA P+ P P
Sbjct: 402 EPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPT 461
Query: 159 TGSARAGRTYSEDPRAPALPQPETT 183
T A T P+ PA P+ T
Sbjct: 462 TTKKPAPTT----PKEPAPTTPKET 482
Score = 30.0 bits (66), Expect = 1.7
Identities = 24/96 (25%), Positives = 30/96 (31%), Gaps = 10/96 (10%)
Query: 99 TQRPWEPTPGSAAPANTLEKQN----------RQPAELLPPQAPRGMLKKAEGEKCGSPA 148
T+ P TP AP T E ++PA P + K+ P
Sbjct: 267 TKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPT 326
Query: 149 ERAPRGPGPKTGSARAGRTYSEDPRAPALPQPETTK 184
P+ P P T P AP P P T K
Sbjct: 327 PTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPK 362
Score = 29.6 bits (65), Expect = 2.3
Identities = 29/119 (24%), Positives = 43/119 (36%), Gaps = 11/119 (9%)
Query: 72 KPMGTLFRRDVPVQTHAITLIHTHNSHTQRPWEPTPGSAAPANTLEKQNRQPAELLPPQA 131
+P T ++ P + T ++ +P TP AP E P E P
Sbjct: 585 EPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPT-T 643
Query: 132 PRGMLKKAEGEKCGSPAERAPRGPGPK---TGSARAGRTYSEDPRAPALPQ---PETTK 184
P+G E PA P+ P PK + + + + D AP P+ P T K
Sbjct: 644 PKGTAPTTLKE----PAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPK 698
Score = 28.9 bits (63), Expect = 3.9
Identities = 22/83 (26%), Positives = 27/83 (32%), Gaps = 4/83 (4%)
Query: 100 QRPWEPTPGSAAPANTLEKQNRQPAELLPPQAPRGMLKKAEGEKCGSPAERAPRGPGPKT 159
+ P TP AP E P + P + K PA P+ P T
Sbjct: 637 KEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTT 696
Query: 160 GSARAGRTYSEDPRAPALPQPET 182
A T P+ PA PET
Sbjct: 697 PKEPAPTT----PKKPAPTTPET 715
Score = 28.1 bits (61), Expect = 6.6
Identities = 26/83 (31%), Positives = 28/83 (33%), Gaps = 4/83 (4%)
Query: 106 TPGSAAPANTLEKQNRQPAELLP--PQAPRGMLKKAEGEKCGS-PAERAPRGPGPKTGSA 162
TP AP E P E P P+ P KA PA P+ P P T
Sbjct: 502 TPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKE 561
Query: 163 RAGRTYSED-PRAPALPQPETTK 184
A T E P P P T K
Sbjct: 562 PAPTTPKETAPTTPKGTAPTTLK 584
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 35.8 bits (81), Expect = 0.032
Identities = 25/83 (30%), Positives = 29/83 (34%), Gaps = 4/83 (4%)
Query: 102 PWEPTPGSAAPANTLEKQNRQPAELLPPQAPRGMLKKAEGEKCGSPAERAPRGPGPKTGS 161
P EPTP + A T K+ P P+ E PA P+ P P T
Sbjct: 270 PKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKE----PAPTTPKEPAPTTTK 325
Query: 162 ARAGRTYSEDPRAPALPQPETTK 184
A T P P P P T K
Sbjct: 326 EPAPTTTKSAPTTPKEPAPTTPK 348
Score = 34.3 bits (77), Expect = 0.092
Identities = 26/95 (27%), Positives = 35/95 (36%), Gaps = 12/95 (12%)
Query: 102 PWEPTPGSAAPANTLEKQN-----RQPAELLPPQAPRGMLKKAEGEKCGSPAERAPRGPG 156
P EP P + PA T K+ ++PA P + K+ P+ P+ P
Sbjct: 371 PKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPA 430
Query: 157 PKTGSAR-------AGRTYSEDPRAPALPQPETTK 184
P T + A T P P P P TTK
Sbjct: 431 PTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTK 465
Score = 33.5 bits (75), Expect = 0.16
Identities = 22/78 (28%), Positives = 28/78 (35%), Gaps = 4/78 (5%)
Query: 106 TPGSAAPANTLEKQNRQPAELLPPQAPRGMLKKAEGEKCGSPAERAPRGPGPKTGSARAG 165
TP AP E P + P + K+ C PA P+G P T A
Sbjct: 615 TPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAP 674
Query: 166 RTYSEDPRAPALPQPETT 183
T P+ PA P+ T
Sbjct: 675 TT----PKEPAPTTPKGT 688
Score = 31.6 bits (70), Expect = 0.59
Identities = 28/98 (28%), Positives = 32/98 (32%), Gaps = 12/98 (12%)
Query: 99 TQRPWEPTPGSAAPANTLEKQNRQPAELLP-------PQAPRGMLKKAEGEKCGS----P 147
T++P TP AP E P +L P P P E + P
Sbjct: 504 TKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEP 563
Query: 148 AERAPRGPGPKTGSARAGRTYSED-PRAPALPQPETTK 184
P P P T A A T E P P P P T K
Sbjct: 564 TPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPK 601
Score = 30.4 bits (67), Expect = 1.3
Identities = 24/85 (28%), Positives = 32/85 (37%), Gaps = 9/85 (10%)
Query: 104 EPTPGSAAPANTLEKQ-----NRQPAELLPPQAPRGMLKKAEGEKCGSPAERAPRGPGPK 158
EP P + A T K+ ++PA P + KK PA P+ P P
Sbjct: 443 EPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPT 502
Query: 159 TGSARAGRTYSEDPRAPALPQPETT 183
T A T P+ PA P+ T
Sbjct: 503 TTKKPAPTT----PKEPAPTTPKET 523
Score = 30.0 bits (66), Expect = 1.7
Identities = 24/96 (25%), Positives = 30/96 (31%), Gaps = 10/96 (10%)
Query: 99 TQRPWEPTPGSAAPANTLEKQN----------RQPAELLPPQAPRGMLKKAEGEKCGSPA 148
T+ P TP AP T E ++PA P + K+ P
Sbjct: 308 TKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPT 367
Query: 149 ERAPRGPGPKTGSARAGRTYSEDPRAPALPQPETTK 184
P+ P P T P AP P P T K
Sbjct: 368 PTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPK 403
Score = 29.6 bits (65), Expect = 2.3
Identities = 29/119 (24%), Positives = 43/119 (36%), Gaps = 11/119 (9%)
Query: 72 KPMGTLFRRDVPVQTHAITLIHTHNSHTQRPWEPTPGSAAPANTLEKQNRQPAELLPPQA 131
+P T ++ P + T ++ +P TP AP E P E P
Sbjct: 626 EPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPT-T 684
Query: 132 PRGMLKKAEGEKCGSPAERAPRGPGPK---TGSARAGRTYSEDPRAPALPQ---PETTK 184
P+G E PA P+ P PK + + + + D AP P+ P T K
Sbjct: 685 PKGTAPTTLKE----PAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPK 739
Score = 28.9 bits (63), Expect = 3.9
Identities = 22/83 (26%), Positives = 27/83 (32%), Gaps = 4/83 (4%)
Query: 100 QRPWEPTPGSAAPANTLEKQNRQPAELLPPQAPRGMLKKAEGEKCGSPAERAPRGPGPKT 159
+ P TP AP E P + P + K PA P+ P T
Sbjct: 678 KEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTT 737
Query: 160 GSARAGRTYSEDPRAPALPQPET 182
A T P+ PA PET
Sbjct: 738 PKEPAPTT----PKKPAPTTPET 756
Score = 28.1 bits (61), Expect = 6.6
Identities = 26/83 (31%), Positives = 28/83 (33%), Gaps = 4/83 (4%)
Query: 106 TPGSAAPANTLEKQNRQPAELLP--PQAPRGMLKKAEGEKCGS-PAERAPRGPGPKTGSA 162
TP AP E P E P P+ P KA PA P+ P P T
Sbjct: 543 TPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKE 602
Query: 163 RAGRTYSED-PRAPALPQPETTK 184
A T E P P P T K
Sbjct: 603 PAPTTPKETAPTTPKGTAPTTLK 625
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 35.8 bits (81), Expect = 0.032
Identities = 25/83 (30%), Positives = 29/83 (34%), Gaps = 4/83 (4%)
Query: 102 PWEPTPGSAAPANTLEKQNRQPAELLPPQAPRGMLKKAEGEKCGSPAERAPRGPGPKTGS 161
P EPTP + A T K+ P P+ E PA P+ P P T
Sbjct: 322 PKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKE----PAPTTPKEPAPTTTK 377
Query: 162 ARAGRTYSEDPRAPALPQPETTK 184
A T P P P P T K
Sbjct: 378 EPAPTTTKSAPTTPKEPAPTTPK 400
Score = 34.3 bits (77), Expect = 0.092
Identities = 26/95 (27%), Positives = 35/95 (36%), Gaps = 12/95 (12%)
Query: 102 PWEPTPGSAAPANTLEKQN-----RQPAELLPPQAPRGMLKKAEGEKCGSPAERAPRGPG 156
P EP P + PA T K+ ++PA P + K+ P+ P+ P
Sbjct: 423 PKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPA 482
Query: 157 PKTGSAR-------AGRTYSEDPRAPALPQPETTK 184
P T + A T P P P P TTK
Sbjct: 483 PTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTK 517
Score = 33.5 bits (75), Expect = 0.16
Identities = 22/78 (28%), Positives = 28/78 (35%), Gaps = 4/78 (5%)
Query: 106 TPGSAAPANTLEKQNRQPAELLPPQAPRGMLKKAEGEKCGSPAERAPRGPGPKTGSARAG 165
TP AP E P + P + K+ C PA P+G P T A
Sbjct: 667 TPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAP 726
Query: 166 RTYSEDPRAPALPQPETT 183
T P+ PA P+ T
Sbjct: 727 TT----PKEPAPTTPKGT 740
Score = 31.6 bits (70), Expect = 0.59
Identities = 28/98 (28%), Positives = 32/98 (32%), Gaps = 12/98 (12%)
Query: 99 TQRPWEPTPGSAAPANTLEKQNRQPAELLP-------PQAPRGMLKKAEGEKCGS----P 147
T++P TP AP E P +L P P P E + P
Sbjct: 556 TKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEP 615
Query: 148 AERAPRGPGPKTGSARAGRTYSED-PRAPALPQPETTK 184
P P P T A A T E P P P P T K
Sbjct: 616 TPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPK 653
Score = 30.4 bits (67), Expect = 1.3
Identities = 24/85 (28%), Positives = 32/85 (37%), Gaps = 9/85 (10%)
Query: 104 EPTPGSAAPANTLEKQ-----NRQPAELLPPQAPRGMLKKAEGEKCGSPAERAPRGPGPK 158
EP P + A T K+ ++PA P + KK PA P+ P P
Sbjct: 495 EPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPT 554
Query: 159 TGSARAGRTYSEDPRAPALPQPETT 183
T A T P+ PA P+ T
Sbjct: 555 TTKKPAPTT----PKEPAPTTPKET 575
Score = 30.0 bits (66), Expect = 1.7
Identities = 24/96 (25%), Positives = 30/96 (31%), Gaps = 10/96 (10%)
Query: 99 TQRPWEPTPGSAAPANTLEKQN----------RQPAELLPPQAPRGMLKKAEGEKCGSPA 148
T+ P TP AP T E ++PA P + K+ P
Sbjct: 360 TKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPT 419
Query: 149 ERAPRGPGPKTGSARAGRTYSEDPRAPALPQPETTK 184
P+ P P T P AP P P T K
Sbjct: 420 PTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPK 455
Score = 29.6 bits (65), Expect = 2.3
Identities = 29/119 (24%), Positives = 43/119 (36%), Gaps = 11/119 (9%)
Query: 72 KPMGTLFRRDVPVQTHAITLIHTHNSHTQRPWEPTPGSAAPANTLEKQNRQPAELLPPQA 131
+P T ++ P + T ++ +P TP AP E P E P
Sbjct: 678 EPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPT-T 736
Query: 132 PRGMLKKAEGEKCGSPAERAPRGPGPK---TGSARAGRTYSEDPRAPALPQ---PETTK 184
P+G E PA P+ P PK + + + + D AP P+ P T K
Sbjct: 737 PKGTAPTTLKE----PAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPK 791
Score = 28.9 bits (63), Expect = 3.9
Identities = 22/83 (26%), Positives = 27/83 (32%), Gaps = 4/83 (4%)
Query: 100 QRPWEPTPGSAAPANTLEKQNRQPAELLPPQAPRGMLKKAEGEKCGSPAERAPRGPGPKT 159
+ P TP AP E P + P + K PA P+ P T
Sbjct: 730 KEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTT 789
Query: 160 GSARAGRTYSEDPRAPALPQPET 182
A T P+ PA PET
Sbjct: 790 PKEPAPTT----PKKPAPTTPET 808
Score = 28.1 bits (61), Expect = 6.6
Identities = 26/83 (31%), Positives = 28/83 (33%), Gaps = 4/83 (4%)
Query: 106 TPGSAAPANTLEKQNRQPAELLP--PQAPRGMLKKAEGEKCGS-PAERAPRGPGPKTGSA 162
TP AP E P E P P+ P KA PA P+ P P T
Sbjct: 595 TPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKE 654
Query: 163 RAGRTYSED-PRAPALPQPETTK 184
A T E P P P T K
Sbjct: 655 PAPTTPKETAPTTPKGTAPTTLK 677
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 35.8 bits (81), Expect = 0.032
Identities = 25/83 (30%), Positives = 29/83 (34%), Gaps = 4/83 (4%)
Query: 102 PWEPTPGSAAPANTLEKQNRQPAELLPPQAPRGMLKKAEGEKCGSPAERAPRGPGPKTGS 161
P EPTP + A T K+ P P+ E PA P+ P P T
Sbjct: 363 PKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKE----PAPTTPKEPAPTTTK 418
Query: 162 ARAGRTYSEDPRAPALPQPETTK 184
A T P P P P T K
Sbjct: 419 EPAPTTTKSAPTTPKEPAPTTPK 441
Score = 34.3 bits (77), Expect = 0.092
Identities = 26/95 (27%), Positives = 35/95 (36%), Gaps = 12/95 (12%)
Query: 102 PWEPTPGSAAPANTLEKQN-----RQPAELLPPQAPRGMLKKAEGEKCGSPAERAPRGPG 156
P EP P + PA T K+ ++PA P + K+ P+ P+ P
Sbjct: 464 PKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPA 523
Query: 157 PKTGSAR-------AGRTYSEDPRAPALPQPETTK 184
P T + A T P P P P TTK
Sbjct: 524 PTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTK 558
Score = 33.5 bits (75), Expect = 0.16
Identities = 22/78 (28%), Positives = 28/78 (35%), Gaps = 4/78 (5%)
Query: 106 TPGSAAPANTLEKQNRQPAELLPPQAPRGMLKKAEGEKCGSPAERAPRGPGPKTGSARAG 165
TP AP E P + P + K+ C PA P+G P T A
Sbjct: 708 TPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAP 767
Query: 166 RTYSEDPRAPALPQPETT 183
T P+ PA P+ T
Sbjct: 768 TT----PKEPAPTTPKGT 781
Score = 31.6 bits (70), Expect = 0.59
Identities = 28/98 (28%), Positives = 32/98 (32%), Gaps = 12/98 (12%)
Query: 99 TQRPWEPTPGSAAPANTLEKQNRQPAELLP-------PQAPRGMLKKAEGEKCGS----P 147
T++P TP AP E P +L P P P E + P
Sbjct: 597 TKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEP 656
Query: 148 AERAPRGPGPKTGSARAGRTYSED-PRAPALPQPETTK 184
P P P T A A T E P P P P T K
Sbjct: 657 TPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPK 694
Score = 30.4 bits (67), Expect = 1.3
Identities = 24/85 (28%), Positives = 32/85 (37%), Gaps = 9/85 (10%)
Query: 104 EPTPGSAAPANTLEKQ-----NRQPAELLPPQAPRGMLKKAEGEKCGSPAERAPRGPGPK 158
EP P + A T K+ ++PA P + KK PA P+ P P
Sbjct: 536 EPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPT 595
Query: 159 TGSARAGRTYSEDPRAPALPQPETT 183
T A T P+ PA P+ T
Sbjct: 596 TTKKPAPTT----PKEPAPTTPKET 616
Score = 30.0 bits (66), Expect = 1.7
Identities = 24/96 (25%), Positives = 30/96 (31%), Gaps = 10/96 (10%)
Query: 99 TQRPWEPTPGSAAPANTLEKQN----------RQPAELLPPQAPRGMLKKAEGEKCGSPA 148
T+ P TP AP T E ++PA P + K+ P
Sbjct: 401 TKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPT 460
Query: 149 ERAPRGPGPKTGSARAGRTYSEDPRAPALPQPETTK 184
P+ P P T P AP P P T K
Sbjct: 461 PTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPK 496
Score = 29.6 bits (65), Expect = 2.3
Identities = 29/119 (24%), Positives = 43/119 (36%), Gaps = 11/119 (9%)
Query: 72 KPMGTLFRRDVPVQTHAITLIHTHNSHTQRPWEPTPGSAAPANTLEKQNRQPAELLPPQA 131
+P T ++ P + T ++ +P TP AP E P E P
Sbjct: 719 EPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPT-T 777
Query: 132 PRGMLKKAEGEKCGSPAERAPRGPGPK---TGSARAGRTYSEDPRAPALPQ---PETTK 184
P+G E PA P+ P PK + + + + D AP P+ P T K
Sbjct: 778 PKGTAPTTLKE----PAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPK 832
Score = 28.9 bits (63), Expect = 3.9
Identities = 22/83 (26%), Positives = 27/83 (32%), Gaps = 4/83 (4%)
Query: 100 QRPWEPTPGSAAPANTLEKQNRQPAELLPPQAPRGMLKKAEGEKCGSPAERAPRGPGPKT 159
+ P TP AP E P + P + K PA P+ P T
Sbjct: 771 KEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTT 830
Query: 160 GSARAGRTYSEDPRAPALPQPET 182
A T P+ PA PET
Sbjct: 831 PKEPAPTT----PKKPAPTTPET 849
Score = 28.1 bits (61), Expect = 6.6
Identities = 26/83 (31%), Positives = 28/83 (33%), Gaps = 4/83 (4%)
Query: 106 TPGSAAPANTLEKQNRQPAELLP--PQAPRGMLKKAEGEKCGS-PAERAPRGPGPKTGSA 162
TP AP E P E P P+ P KA PA P+ P P T
Sbjct: 636 TPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKE 695
Query: 163 RAGRTYSED-PRAPALPQPETTK 184
A T E P P P T K
Sbjct: 696 PAPTTPKETAPTTPKGTAPTTLK 718
>gi|239746104 PREDICTED: hypothetical protein XP_002344198 [Homo
sapiens]
Length = 398
Score = 35.8 bits (81), Expect = 0.032
Identities = 20/51 (39%), Positives = 23/51 (45%)
Query: 145 GSPAERAPRGPGPKTGSARAGRTYSEDPRAPALPQPETTKMQISLDLDRKR 195
G PA P PGP AR R Y PR P +P + K+ L L R R
Sbjct: 178 GPPARLPPAPPGPLLRPARPPRPYFPRPRTPPTCEPPSRKLPPPLPLCRSR 228
>gi|239754626 PREDICTED: hypothetical protein [Homo sapiens]
Length = 103
Score = 35.0 bits (79), Expect = 0.054
Identities = 30/96 (31%), Positives = 43/96 (44%), Gaps = 11/96 (11%)
Query: 99 TQRPWEPTPGSAAPANTLEKQNRQPAELLPPQAPRGMLKKAEGEKCGSPAERAPRGPGPK 158
TQR W P P +AA TL+ + + A R ++ +A+G + A PR PG
Sbjct: 7 TQRTWAPGPSNAALDLTLKGSKDKASGAGARGAGREVVAEAKGRRDLGLARVCPRRPG-- 64
Query: 159 TGSARAGRTYSEDPRAPALPQPETTKMQISLDLDRK 194
AGR + PR L + T+ LDL R+
Sbjct: 65 -----AGRRCTVSPREADLGPEKDTR----LDLPRR 91
>gi|223972704 hypothetical protein LOC284418 [Homo sapiens]
Length = 922
Score = 34.7 bits (78), Expect = 0.070
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 8/78 (10%)
Query: 103 WEPTPGSAAPANTLEKQNRQPAELLPPQ-APRGMLKKAEGEKCGSPAERAPRGPGPKTGS 161
W+P PG A P + PA PP+ AP + +P+++AP P P +
Sbjct: 430 WKPPPGLAPP-------QKAPAASAPPRKAPAVPAPSQKAPAVPAPSQKAPAIPAPSRKA 482
Query: 162 ARAGRTYSEDPRAPALPQ 179
+ A + + PA PQ
Sbjct: 483 SAASASPRKASAVPAPPQ 500
>gi|224493919 zinc finger and SCAN domain containing 18 isoform 2
[Homo sapiens]
Length = 374
Score = 34.3 bits (77), Expect = 0.092
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 10/76 (13%)
Query: 102 PWEPTPGSAA---PANTLEKQNRQPAELLPPQAPRGMLKKAEGEKC-GSPAERAPRGPGP 157
P E PG A P+ T E++ QP + PQ P + AE + GS + + P P
Sbjct: 169 PTEAPPGDALADPPSGTTEEEEEQPGKAPDPQDP----QDAESDSATGSQRQSVIQQPAP 224
Query: 158 KTGSARAG--RTYSED 171
G+A+ G R + ED
Sbjct: 225 DRGTAKLGTKRPHPED 240
>gi|224493912 zinc finger and SCAN domain containing 18 isoform 3
[Homo sapiens]
Length = 510
Score = 34.3 bits (77), Expect = 0.092
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 10/76 (13%)
Query: 102 PWEPTPGSAA---PANTLEKQNRQPAELLPPQAPRGMLKKAEGEKC-GSPAERAPRGPGP 157
P E PG A P+ T E++ QP + PQ P + AE + GS + + P P
Sbjct: 305 PTEAPPGDALADPPSGTTEEEEEQPGKAPDPQDP----QDAESDSATGSQRQSVIQQPAP 360
Query: 158 KTGSARAG--RTYSED 171
G+A+ G R + ED
Sbjct: 361 DRGTAKLGTKRPHPED 376
>gi|226371704 zinc finger and SCAN domain containing 18 isoform 3
[Homo sapiens]
Length = 510
Score = 34.3 bits (77), Expect = 0.092
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 10/76 (13%)
Query: 102 PWEPTPGSAA---PANTLEKQNRQPAELLPPQAPRGMLKKAEGEKC-GSPAERAPRGPGP 157
P E PG A P+ T E++ QP + PQ P + AE + GS + + P P
Sbjct: 305 PTEAPPGDALADPPSGTTEEEEEQPGKAPDPQDP----QDAESDSATGSQRQSVIQQPAP 360
Query: 158 KTGSARAG--RTYSED 171
G+A+ G R + ED
Sbjct: 361 DRGTAKLGTKRPHPED 376
>gi|21536413 bridging integrator 1 isoform 7 [Homo sapiens]
Length = 475
Score = 34.3 bits (77), Expect = 0.092
Identities = 28/90 (31%), Positives = 35/90 (38%), Gaps = 15/90 (16%)
Query: 104 EPTP-GSAAPANTLEKQNRQPAELLPPQAPRGMLKKAEGEKCGS-PAERAPRGPG----- 156
EP P G A P TL K QP E P G AEG S P++ A GP
Sbjct: 284 EPEPAGGATPGATLPKSPSQPTESPAGSLPSGEPSAAEGTFAVSWPSQTAEPGPAQPAEA 343
Query: 157 --------PKTGSARAGRTYSEDPRAPALP 178
P G+ G T + + + +LP
Sbjct: 344 SEVAGGTQPAAGAQEPGETAASEAASSSLP 373
>gi|21536404 bridging integrator 1 isoform 3 [Homo sapiens]
Length = 506
Score = 34.3 bits (77), Expect = 0.092
Identities = 28/90 (31%), Positives = 35/90 (38%), Gaps = 15/90 (16%)
Query: 104 EPTP-GSAAPANTLEKQNRQPAELLPPQAPRGMLKKAEGEKCGS-PAERAPRGPG----- 156
EP P G A P TL K QP E P G AEG S P++ A GP
Sbjct: 315 EPEPAGGATPGATLPKSPSQPTESPAGSLPSGEPSAAEGTFAVSWPSQTAEPGPAQPAEA 374
Query: 157 --------PKTGSARAGRTYSEDPRAPALP 178
P G+ G T + + + +LP
Sbjct: 375 SEVAGGTQPAAGAQEPGETAASEAASSSLP 404
>gi|224493905 zinc finger and SCAN domain containing 18 isoform 1
[Homo sapiens]
Length = 566
Score = 34.3 bits (77), Expect = 0.092
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 10/76 (13%)
Query: 102 PWEPTPGSAA---PANTLEKQNRQPAELLPPQAPRGMLKKAEGEKC-GSPAERAPRGPGP 157
P E PG A P+ T E++ QP + PQ P + AE + GS + + P P
Sbjct: 361 PTEAPPGDALADPPSGTTEEEEEQPGKAPDPQDP----QDAESDSATGSQRQSVIQQPAP 416
Query: 158 KTGSARAG--RTYSED 171
G+A+ G R + ED
Sbjct: 417 DRGTAKLGTKRPHPED 432
>gi|30795231 brain abundant, membrane attached signal protein 1
[Homo sapiens]
Length = 227
Score = 33.9 bits (76), Expect = 0.12
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Query: 104 EPTPGSAAPANTLEKQNRQPAELLPPQAPRGMLKKAEGEKCGSPA-ERAPRGPGPKTGSA 162
E TP + P E + + P Q G ++ EGEK + A E AP+ KT A
Sbjct: 34 EGTPKESEPQAAAEPAEAKEGKEKPDQDAEGKAEEKEGEKDAAAAKEEAPKAEPEKTEGA 93
Query: 163 RAGRTYSEDPRAPALPQ 179
+ +E P+AP Q
Sbjct: 94 AEAK--AEPPKAPEQEQ 108
>gi|239753975 PREDICTED: hypothetical protein [Homo sapiens]
Length = 389
Score = 33.9 bits (76), Expect = 0.12
Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 12/85 (14%)
Query: 101 RPWEPTPGS-AAPANTLEKQNRQPAELLPPQAPRGMLKKAEGEKCGSPAERAPRGPGPKT 159
RP EPTPGS A P +L + +P L P ++P + G P AP P P +
Sbjct: 129 RPSEPTPGSEALPPGSLPEGEPRPYALPPRESP-----APRPFRWGDPFSPAPPRPQPPS 183
Query: 160 GSARAGRTYSEDPRAPALPQPETTK 184
R ++ P PA P +
Sbjct: 184 ------RPAAQPPSRPAFRSPRPVR 202
>gi|51173735 ras responsive element binding protein 1 isoform 2 [Homo
sapiens]
Length = 1687
Score = 33.9 bits (76), Expect = 0.12
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 8/112 (7%)
Query: 90 TLIHTHNSHTQRPWEPTPGSAAPANTLEKQNRQPA---ELLPPQAPRGMLKKAEGEKCGS 146
TL +H ++ EP A+T E + QPA E PP+ P +++ A G +
Sbjct: 1407 TLSRHRKAHGRQ--EPKDEKGDGASTAE-EGPQPAPEQEEKPPETPAEVVESAPGAG-EA 1462
Query: 147 PAER-APRGPGPKTGSARAGRTYSEDPRAPALPQPETTKMQISLDLDRKRLC 197
PAE+ A GP G + A + SE P+ ++ K S RK++C
Sbjct: 1463 PAEKLAEETEGPSDGESAAEKRSSEKSDDDKKPKTDSPKSVASKADKRKKVC 1514
>gi|51173737 ras responsive element binding protein 1 isoform 1 [Homo
sapiens]
Length = 1742
Score = 33.9 bits (76), Expect = 0.12
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 8/112 (7%)
Query: 90 TLIHTHNSHTQRPWEPTPGSAAPANTLEKQNRQPA---ELLPPQAPRGMLKKAEGEKCGS 146
TL +H ++ EP A+T E + QPA E PP+ P +++ A G +
Sbjct: 1462 TLSRHRKAHGRQ--EPKDEKGDGASTAE-EGPQPAPEQEEKPPETPAEVVESAPGAG-EA 1517
Query: 147 PAER-APRGPGPKTGSARAGRTYSEDPRAPALPQPETTKMQISLDLDRKRLC 197
PAE+ A GP G + A + SE P+ ++ K S RK++C
Sbjct: 1518 PAEKLAEETEGPSDGESAAEKRSSEKSDDDKKPKTDSPKSVASKADKRKKVC 1569
>gi|17511435 roundabout homolog 4, magic roundabout [Homo sapiens]
Length = 1007
Score = 33.9 bits (76), Expect = 0.12
Identities = 37/146 (25%), Positives = 61/146 (41%), Gaps = 8/146 (5%)
Query: 24 PRENPSPASAGFAKKLRKLTPNSEGGKHKTLNFLKMGSCFHSHVGIKG--KPMGTLFRRD 81
PR + +PA A AKK ++L + + + L++ +C + G K + G + +
Sbjct: 633 PRLSLAPAEAWKAKKKQELQHANSSPLLRGSHSLELRACELGNRGSKNLSQSPGAVPQAL 692
Query: 82 VPVQTHAITLIHTHNSHTQRPWEPTPGSAAPANTLEKQNRQPAELLPPQAPRGMLKKAEG 141
V + L+ + N R P P P T Q++Q + PQAP +L A
Sbjct: 693 VAWRALGPKLLSSSNELVTRHLPPAP--LFPHETPPTQSQQTQPPVAPQAPSSILLPAAP 750
Query: 142 ----EKCGSPAERAPRGPGPKTGSAR 163
C P+ +A GP S+R
Sbjct: 751 IPILSPCSPPSPQASSLSGPSPASSR 776
>gi|87239981 tankyrase, TRF1-interacting ankyrin-related ADP-ribose
polymerase [Homo sapiens]
Length = 1327
Score = 33.9 bits (76), Expect = 0.12
Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 15/103 (14%)
Query: 95 HNSHTQRPWEPTPGSAAP------------ANTLEKQNRQPAELLPPQAPRGMLKKAEGE 142
H+ H Q+ +P PG++AP A + + L P +PR L EG+
Sbjct: 10 HHHHHQQQLQPAPGASAPPPPPPPPLSPGLAPGTTPASPTASGLAPFASPRHGLALPEGD 69
Query: 143 KCGSPAERAPRGPGPKTGSARAGRTYS--EDPRAPALPQPETT 183
P +R PR P P G++ T + AP +P T+
Sbjct: 70 GSRDPPDR-PRSPDPVDGTSCCSTTSTICTVAAAPVVPAVSTS 111
>gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens]
Length = 1120
Score = 33.9 bits (76), Expect = 0.12
Identities = 26/95 (27%), Positives = 36/95 (37%), Gaps = 13/95 (13%)
Query: 105 PTPGSAAPANTLEKQNRQPAELLPPQAPRGMLKKAEGEKCGSPAERAPRGPGPKTGSARA 164
P G+ P + P+E P AP G E E+ G P G P GS+
Sbjct: 813 PKEGATGPRRRTLSEPAGPSEPPGPPAPAGPASDTEEEEPG------PEGTPPSRGSSGE 866
Query: 165 GRTYSEDPR-------APALPQPETTKMQISLDLD 192
G ++E+ PA P P T + LD +
Sbjct: 867 GLPFAEEGNLTIKQRPKPAGPPPRETPVPPGLDFN 901
Score = 33.1 bits (74), Expect = 0.20
Identities = 51/185 (27%), Positives = 70/185 (37%), Gaps = 37/185 (20%)
Query: 23 GPRENPSP-ASAGFAKKLRKL------TPNSEGGKHKTLNFLKMGSCFHSHVGIKGKPMG 75
GP E P P A AG A + TP S G + L F + G+ + + KP G
Sbjct: 830 GPSEPPGPPAPAGPASDTEEEEPGPEGTPPSRGSSGEGLPFAEEGNLT---IKQRPKPAG 886
Query: 76 TLFRRDVPVQ-------THAITLIHTHNSHTQRPWEP----------TPGSAAPANTLEK 118
R+ PV T + T+ + P + TPG AAP +
Sbjct: 887 PP-PRETPVPPGLDFNLTESDTVKRRPKCREREPLQTALLAFGVASATPGPAAPLPSPTP 945
Query: 119 QNRQPAELLPPQAPRGMLKKAEG---EKCGSPAERAP----RGPGPKTGSARAGRTYSED 171
PA LP P + A+G SPA + P GPG ++ +A +E
Sbjct: 946 GESPPASSLPQPEPSSL--PAQGVPTPLAPSPAMQPPVPPCPGPGLESSAASRWNGETEP 1003
Query: 172 PRAPA 176
P APA
Sbjct: 1004 PAAPA 1008
Score = 28.9 bits (63), Expect = 3.9
Identities = 24/88 (27%), Positives = 31/88 (35%), Gaps = 9/88 (10%)
Query: 91 LIHTHNSHTQRPWEPTPGSAAPANTLEKQNRQPAELLPPQAPRGMLKKAEGEKCGSPAER 150
L+ T S T P TP S + A ++ PP P L G P
Sbjct: 756 LVRTSPSVTPTPARGTPRSQSFALRARRKG-------PPPPPPKRLSSVSGPSPEPPP-- 806
Query: 151 APRGPGPKTGSARAGRTYSEDPRAPALP 178
PGPK G+ R +P P+ P
Sbjct: 807 LDESPGPKEGATGPRRRTLSEPAGPSEP 834
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.132 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,073,538
Number of Sequences: 37866
Number of extensions: 640707
Number of successful extensions: 4060
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 241
Number of HSP's that attempted gapping in prelim test: 3677
Number of HSP's gapped (non-prelim): 590
length of query: 230
length of database: 18,247,518
effective HSP length: 99
effective length of query: 131
effective length of database: 14,498,784
effective search space: 1899340704
effective search space used: 1899340704
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.