BAT3 9848

Name: BAT3	Sequence: fasta or formatted (1126aa)		NCBI GI: 18375630
Description: HLA-B associated transcript-3 isoform b		Referenced in: Ubiquitin and Related Protein Modifications
Other entries for this name: alt prot [1132aa] HLA-B associated transcript-3 isoform a alt mRNA [1126aa] HLA-B associated transcript-3 isoform b alt mRNA [1126aa] HLA-B associated transcript-3 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.4 106 3 C cysteine 0.7 8 1 D aspartate 2.7 30 2 E glutamate 6.4 72 2 F phenylalanine 2.3 26 2 G glycine 9.1 103 3 H histidine 2.4 27 1 I isoleucine 2.9 33 2 K lysine 1.2 13 2 L leucine 8.6 97 3 M methionine 2.9 33 2 N asparagine 3.2 36 3 P proline 13.5 152 12 Q glutamine 7.3 82 2 R arginine 5.2 59 2 S serine 8.2 92 2 T threonine 5.9 66 2 V valine 6.6 74 2 W tryptophan 0.3 3 1 Y tyrosine 1.2 14 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 HLA-B associated transcript-3 isoform b BAT3 1.000 HLA-B associated transcript-3 isoform b BAT3 1.000 HLA-B associated transcript-3 isoform b BAT3 0.997 HLA-B associated transcript-3 isoform a PRB2 0.027 proline-rich protein BstNI subfamily 2 PRB1 0.026 proline-rich protein BstNI subfamily 1 isoform 1 pre... NACA 0.026 nascent polypeptide-associated complex alpha subuni... FLJ22184 0.025 PREDICTED: hypothetical protein FLJ22184 MBD6 0.025 methyl-CpG binding domain protein 6 FLJ22184 0.024 PREDICTED: hypothetical protein FLJ22184 RAPH1 0.024 Ras association and pleckstrin homology domains 1 is... WIPF3 0.024 WAS/WASL interacting protein family, member 3 [Homo... SF1 0.024 splicing factor 1 isoform 2 SF1 0.024 splicing factor 1 isoform 1 FLJ22184 0.024 PREDICTED: hypothetical protein LOC80164 TAF4 0.024 TBP-associated factor 4 PRB3 0.023 proline-rich protein BstNI subfamily 3 precursor [H... FMN2 0.022 formin 2 COL15A1 0.022 alpha 1 type XV collagen precursor COL17A1 0.021 alpha 1 type XVII collagen PRR12 0.021 proline rich 12 GLTSCR1 0.020 glioma tumor suppressor candidate region gene 1 [Ho... SFRS15 0.020 splicing factor, arginine/serine-rich 15 isoform 3 ... COL1A2 0.020 alpha 2 type I collagen SMARCA4 0.020 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.020 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.020 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.020 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.020 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.020 SWI/SNF-related matrix-associated actin-dependent r... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.