BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|169167670 PREDICTED: similar to hCG1646049 [Homo sapiens] (346 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|239754042 PREDICTED: similar to hCG1646049 [Homo sapiens] 712 0.0 gi|239748572 PREDICTED: similar to hCG1646049 [Homo sapiens] 712 0.0 gi|169167670 PREDICTED: similar to hCG1646049 [Homo sapiens] 712 0.0 gi|110832843 TBP-associated factor 4 [Homo sapiens] 63 4e-10 gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 58 1e-08 gi|169160903 PREDICTED: hypothetical protein [Homo sapiens] 55 9e-08 gi|224465238 hypothetical protein LOC283999 [Homo sapiens] 53 5e-07 gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 53 5e-07 gi|239748752 PREDICTED: hypothetical protein XP_002346787 [Homo ... 52 6e-07 gi|239757987 PREDICTED: hypothetical protein [Homo sapiens] 52 1e-06 gi|40789265 beta 1,4-N-acetylgalactosaminyltransferase-transfera... 52 1e-06 gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens] 52 1e-06 gi|23510413 sorting nexin 26 [Homo sapiens] 50 3e-06 gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom... 50 4e-06 gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Hom... 50 4e-06 gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 50 4e-06 gi|239740948 PREDICTED: hypothetical protein LOC644246 [Homo sap... 49 5e-06 gi|182507165 thymus expressed gene 3-like [Homo sapiens] 49 9e-06 gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo ... 48 1e-05 gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo ... 48 1e-05 gi|239508962 PREDICTED: hypothetical protein [Homo sapiens] 48 1e-05 gi|188536004 zinc finger protein 469 [Homo sapiens] 48 1e-05 gi|148229134 ring finger and KH domain containing 2 [Homo sapiens] 48 1e-05 gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 48 1e-05 gi|239749199 PREDICTED: hypothetical protein XP_002346952 [Homo ... 47 2e-05 gi|239756550 PREDICTED: hypothetical protein XP_002344932 [Homo ... 47 3e-05 gi|239749077 PREDICTED: hypothetical protein XP_002346898 [Homo ... 47 3e-05 gi|239746104 PREDICTED: hypothetical protein XP_002344198 [Homo ... 47 3e-05 gi|239745514 PREDICTED: hypothetical protein XP_002343509 [Homo ... 47 3e-05 gi|239743103 PREDICTED: hypothetical protein XP_002342755 [Homo ... 47 3e-05 >gi|239754042 PREDICTED: similar to hCG1646049 [Homo sapiens] Length = 346 Score = 712 bits (1837), Expect = 0.0 Identities = 346/346 (100%), Positives = 346/346 (100%) Query: 1 MLSVSGSDPQVLEEHPSRKLGRYRSPTPLRPAKGKTICTRFGDKRSSGQAGNKSERELQA 60 MLSVSGSDPQVLEEHPSRKLGRYRSPTPLRPAKGKTICTRFGDKRSSGQAGNKSERELQA Sbjct: 1 MLSVSGSDPQVLEEHPSRKLGRYRSPTPLRPAKGKTICTRFGDKRSSGQAGNKSERELQA 60 Query: 61 RTPAPPRERGESSSPRGPTLRGRAKTTRGRSQGAGATETSAGNSAATAAPHPTPASYPQG 120 RTPAPPRERGESSSPRGPTLRGRAKTTRGRSQGAGATETSAGNSAATAAPHPTPASYPQG Sbjct: 61 RTPAPPRERGESSSPRGPTLRGRAKTTRGRSQGAGATETSAGNSAATAAPHPTPASYPQG 120 Query: 121 TISPPQLPAPRPKRFGGKQRPLWRIRGWETTVARLPEPRVGKLGKGPPPRPAPPGTRCCP 180 TISPPQLPAPRPKRFGGKQRPLWRIRGWETTVARLPEPRVGKLGKGPPPRPAPPGTRCCP Sbjct: 121 TISPPQLPAPRPKRFGGKQRPLWRIRGWETTVARLPEPRVGKLGKGPPPRPAPPGTRCCP 180 Query: 181 GARAAQLLREAAAAAQGLRAPAARLPEPTRRAPGRPGCLPTAAAAAADALWRSRRAPLPP 240 GARAAQLLREAAAAAQGLRAPAARLPEPTRRAPGRPGCLPTAAAAAADALWRSRRAPLPP Sbjct: 181 GARAAQLLREAAAAAQGLRAPAARLPEPTRRAPGRPGCLPTAAAAAADALWRSRRAPLPP 240 Query: 241 TEFLSPRRTRPRKHPERTRRPAQRLESGCRGHCSRGAPALAPPKLSPPFPCLAQSASRAA 300 TEFLSPRRTRPRKHPERTRRPAQRLESGCRGHCSRGAPALAPPKLSPPFPCLAQSASRAA Sbjct: 241 TEFLSPRRTRPRKHPERTRRPAQRLESGCRGHCSRGAPALAPPKLSPPFPCLAQSASRAA 300 Query: 301 GARRALSASRGRRGLLGSGSLALPLPGCREPRQRLHGSDGAAGARC 346 GARRALSASRGRRGLLGSGSLALPLPGCREPRQRLHGSDGAAGARC Sbjct: 301 GARRALSASRGRRGLLGSGSLALPLPGCREPRQRLHGSDGAAGARC 346 >gi|239748572 PREDICTED: similar to hCG1646049 [Homo sapiens] Length = 346 Score = 712 bits (1837), Expect = 0.0 Identities = 346/346 (100%), Positives = 346/346 (100%) Query: 1 MLSVSGSDPQVLEEHPSRKLGRYRSPTPLRPAKGKTICTRFGDKRSSGQAGNKSERELQA 60 MLSVSGSDPQVLEEHPSRKLGRYRSPTPLRPAKGKTICTRFGDKRSSGQAGNKSERELQA Sbjct: 1 MLSVSGSDPQVLEEHPSRKLGRYRSPTPLRPAKGKTICTRFGDKRSSGQAGNKSERELQA 60 Query: 61 RTPAPPRERGESSSPRGPTLRGRAKTTRGRSQGAGATETSAGNSAATAAPHPTPASYPQG 120 RTPAPPRERGESSSPRGPTLRGRAKTTRGRSQGAGATETSAGNSAATAAPHPTPASYPQG Sbjct: 61 RTPAPPRERGESSSPRGPTLRGRAKTTRGRSQGAGATETSAGNSAATAAPHPTPASYPQG 120 Query: 121 TISPPQLPAPRPKRFGGKQRPLWRIRGWETTVARLPEPRVGKLGKGPPPRPAPPGTRCCP 180 TISPPQLPAPRPKRFGGKQRPLWRIRGWETTVARLPEPRVGKLGKGPPPRPAPPGTRCCP Sbjct: 121 TISPPQLPAPRPKRFGGKQRPLWRIRGWETTVARLPEPRVGKLGKGPPPRPAPPGTRCCP 180 Query: 181 GARAAQLLREAAAAAQGLRAPAARLPEPTRRAPGRPGCLPTAAAAAADALWRSRRAPLPP 240 GARAAQLLREAAAAAQGLRAPAARLPEPTRRAPGRPGCLPTAAAAAADALWRSRRAPLPP Sbjct: 181 GARAAQLLREAAAAAQGLRAPAARLPEPTRRAPGRPGCLPTAAAAAADALWRSRRAPLPP 240 Query: 241 TEFLSPRRTRPRKHPERTRRPAQRLESGCRGHCSRGAPALAPPKLSPPFPCLAQSASRAA 300 TEFLSPRRTRPRKHPERTRRPAQRLESGCRGHCSRGAPALAPPKLSPPFPCLAQSASRAA Sbjct: 241 TEFLSPRRTRPRKHPERTRRPAQRLESGCRGHCSRGAPALAPPKLSPPFPCLAQSASRAA 300 Query: 301 GARRALSASRGRRGLLGSGSLALPLPGCREPRQRLHGSDGAAGARC 346 GARRALSASRGRRGLLGSGSLALPLPGCREPRQRLHGSDGAAGARC Sbjct: 301 GARRALSASRGRRGLLGSGSLALPLPGCREPRQRLHGSDGAAGARC 346 >gi|169167670 PREDICTED: similar to hCG1646049 [Homo sapiens] Length = 346 Score = 712 bits (1837), Expect = 0.0 Identities = 346/346 (100%), Positives = 346/346 (100%) Query: 1 MLSVSGSDPQVLEEHPSRKLGRYRSPTPLRPAKGKTICTRFGDKRSSGQAGNKSERELQA 60 MLSVSGSDPQVLEEHPSRKLGRYRSPTPLRPAKGKTICTRFGDKRSSGQAGNKSERELQA Sbjct: 1 MLSVSGSDPQVLEEHPSRKLGRYRSPTPLRPAKGKTICTRFGDKRSSGQAGNKSERELQA 60 Query: 61 RTPAPPRERGESSSPRGPTLRGRAKTTRGRSQGAGATETSAGNSAATAAPHPTPASYPQG 120 RTPAPPRERGESSSPRGPTLRGRAKTTRGRSQGAGATETSAGNSAATAAPHPTPASYPQG Sbjct: 61 RTPAPPRERGESSSPRGPTLRGRAKTTRGRSQGAGATETSAGNSAATAAPHPTPASYPQG 120 Query: 121 TISPPQLPAPRPKRFGGKQRPLWRIRGWETTVARLPEPRVGKLGKGPPPRPAPPGTRCCP 180 TISPPQLPAPRPKRFGGKQRPLWRIRGWETTVARLPEPRVGKLGKGPPPRPAPPGTRCCP Sbjct: 121 TISPPQLPAPRPKRFGGKQRPLWRIRGWETTVARLPEPRVGKLGKGPPPRPAPPGTRCCP 180 Query: 181 GARAAQLLREAAAAAQGLRAPAARLPEPTRRAPGRPGCLPTAAAAAADALWRSRRAPLPP 240 GARAAQLLREAAAAAQGLRAPAARLPEPTRRAPGRPGCLPTAAAAAADALWRSRRAPLPP Sbjct: 181 GARAAQLLREAAAAAQGLRAPAARLPEPTRRAPGRPGCLPTAAAAAADALWRSRRAPLPP 240 Query: 241 TEFLSPRRTRPRKHPERTRRPAQRLESGCRGHCSRGAPALAPPKLSPPFPCLAQSASRAA 300 TEFLSPRRTRPRKHPERTRRPAQRLESGCRGHCSRGAPALAPPKLSPPFPCLAQSASRAA Sbjct: 241 TEFLSPRRTRPRKHPERTRRPAQRLESGCRGHCSRGAPALAPPKLSPPFPCLAQSASRAA 300 Query: 301 GARRALSASRGRRGLLGSGSLALPLPGCREPRQRLHGSDGAAGARC 346 GARRALSASRGRRGLLGSGSLALPLPGCREPRQRLHGSDGAAGARC Sbjct: 301 GARRALSASRGRRGLLGSGSLALPLPGCREPRQRLHGSDGAAGARC 346 >gi|110832843 TBP-associated factor 4 [Homo sapiens] Length = 1085 Score = 62.8 bits (151), Expect = 4e-10 Identities = 91/326 (27%), Positives = 114/326 (34%), Gaps = 68/326 (20%) Query: 74 SPRGPTLRGRAKTTRGR-------SQGAGATETSAGNSAATAAPHPTPASYPQGTISPPQ 126 +PR P +R A G + AGA + A AAP P PA + PQ Sbjct: 44 APRTPEVRAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQ 103 Query: 127 LPAP----RPKRFGGKQRPLWRIR-------------GWETTVARLPEPR---------- 159 P P RP G P ++R VA PEP Sbjct: 104 RPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGP 163 Query: 160 ---VGKLGKGPPPRPAP-----PGTRCCPGAR-----AAQLLREAAAAAQGL----RAPA 202 + G GP P P P PG PGA +A LL AAA + PA Sbjct: 164 AALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPA 223 Query: 203 ARLPEPTRRAPGRPGCLPTAAAAAADALWRSRRAPLPPTEFLSPRRTRPRKHPERTRRPA 262 A LP P APG P AAA AP P+ +P P P PA Sbjct: 224 ALLPLPKPAAPGTVIQTPPFVGAAAPP------APAAPSPPAAPAPAAPAAAPP-PPPPA 276 Query: 263 QRLESGCRGHCSRGAPALAPPKLSPPFPCLAQSASRAAGARRALSASRGRRGLLG----S 318 + GH G P AP + P P AQ+ A A A+ G G+ G Sbjct: 277 PATLARPPGH-PAGPPTAAP---AVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPG 332 Query: 319 GSLALPLPGCR--EPRQRLHGSDGAA 342 + A P PG + P++ + + AA Sbjct: 333 AAAAAPAPGVKAESPKRVVQAAPPAA 358 Score = 45.8 bits (107), Expect = 6e-05 Identities = 57/192 (29%), Positives = 69/192 (35%), Gaps = 31/192 (16%) Query: 94 AGATETSAGNSAATAAPHPTPASYPQGTISPPQLPAPRPKRFGGKQRPLWRIRGWETTVA 153 A + +A AA AA P P P PP PA P P G A Sbjct: 253 AAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAA 312 Query: 154 RLPEPRVG-KLGKGPPPRPAPPGTRCCPGARA---AQLLREAAAAAQGLRA--PAA---- 203 P P G G P P PG +A ++++ A AAQ L A PA+ Sbjct: 313 PAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGPASTAAS 372 Query: 204 ---------RLPEPTR---RAPGRPGCLPTAAAAAA--------DALWRSRRAPLPPTEF 243 LP P APG P LP AA A A RA L PT Sbjct: 373 MVIGPTMQGALPSPAAVPPPAPGTPTGLPKGAAGAVTQSLSRTPTATTSGIRATLTPT-V 431 Query: 244 LSPRRTRPRKHP 255 L+PR +P ++P Sbjct: 432 LAPRLPQPPQNP 443 >gi|122937496 WAS/WASL interacting protein family, member 3 [Homo sapiens] Length = 483 Score = 58.2 bits (139), Expect = 1e-08 Identities = 94/330 (28%), Positives = 111/330 (33%), Gaps = 44/330 (13%) Query: 31 PAKGKTICTRFGDKRSSGQ---AGNKSERELQARTPAPPRERGESSSPRGPTLRGRAKTT 87 P G F R +GQ AG K+ + +R P+P S P P R T Sbjct: 96 PTLGDLFAGGFPVLRPAGQRDVAGGKTGQGPGSRAPSPRLPNKTISGPLIPPASPRLGNT 155 Query: 88 RGRSQGAGATETSAGNSAATAAPHPTPASYPQGTISPPQLPAPRPKRFGGK-QRPLWRIR 146 + A +A TA P P + P T PP P P P + PL Sbjct: 156 -----------SEAHGAARTAPPRPNVPAPPPPTPPPPPPPLPPPLPSSSPIKTPLVSPP 204 Query: 147 GWETTVARLPEPRVGKLGKGPPPRPAPPGTRCCPGARAAQLLREAAAAAQ--GLRAPAAR 204 G T LP PPP P PP T P A +L + A Q L P Sbjct: 205 G-PLTKGNLPVVAPPVPCAPPPPPPPPPPTP--PPLPPASVLSDKAVKPQLAPLHLPPIP 261 Query: 205 LPEPTRRAPGRPGCLPTAAAAAADALW-RSRRAPLPPTEFLSPRRTRPRKHPERTRRPAQ 263 P P G PG A+ A DA + PLPP SPR + P P Sbjct: 262 PPLPLLPPCGYPGLKAEPASPAQDAQEPPAPPPPLPPYASCSPRASLPAP-------PLP 314 Query: 264 RLESGCRGHCSRGAPALAPPKLSPPFPCLAQSASRAA--------GARRALSASRGRRGL 315 + S S P PPK SP F Q A A G++ L R R Sbjct: 315 GVNS------SSETPPPLPPK-SPSFQAPPQKAGAQALPAPPAPPGSQPFLQKKRHGRPG 367 Query: 316 LGSGSL-ALPLPGCREPRQRLHGSDGAAGA 344 G G L P P R P L A A Sbjct: 368 AGGGKLNPPPAPPARSPTTELSSKSQQATA 397 >gi|169160903 PREDICTED: hypothetical protein [Homo sapiens] Length = 426 Score = 55.1 bits (131), Expect = 9e-08 Identities = 80/273 (29%), Positives = 96/273 (35%), Gaps = 68/273 (24%) Query: 81 RGRAKTTRGRSQGAGATETSAGNSAATAAPHPTPASYPQGTISPPQLPAPRPKRFGGKQR 140 RG+ T R+ G E A T AP P S P PP LPAP QR Sbjct: 3 RGQRFTPHPRTPAPGCPEV-APQPEGTDAPGPAVCS-PTARAPPPILPAP--------QR 52 Query: 141 PLWRIRGWETTV----------ARLPEPRVGKLGK--------GPPPRPAPPGTRCCPGA 182 P R R WE A L P +LG+ P P P P R G Sbjct: 53 PPTRAREWEGAAWAAGATGVGAALLALPGSRRLGRVPLTFREASPGPAPGAPRARGSCGR 112 Query: 183 RAAQLLREAAAAAQGLRAPAARLPEPTRRAPGRPGCLPTAAAAAADALWRSRRAPLPPTE 242 R A ++A A AAR P +R+ R CLP + + Sbjct: 113 EPGPRRRRAPSSAGKRPAAAARAAPPRQRSLAR--CLPRSVGSC---------------- 154 Query: 243 FLSPRRTRPRKHPERTRRPAQRLESGCRGHCSRGAPALAPPKLSPPFPCLA--QSASRAA 300 RP P RR +R CR HC R P PP L P + + A+ A Sbjct: 155 ------VRPSVGPSLPRRHCRR---HCRCHCRR-RPLPKPPPLQPRLGSASPPRLAAPLA 204 Query: 301 GARR-ALS------ASRGRRGLLGSGSLALPLP 326 G+R +LS R R G G LPLP Sbjct: 205 GSRAPSLSPFPRRCRRRAERSPAGHG---LPLP 234 Score = 35.0 bits (79), Expect = 0.099 Identities = 53/198 (26%), Positives = 70/198 (35%), Gaps = 36/198 (18%) Query: 63 PAPPRERGESSSPRGPTLRGRAKTTRGRSQGAGATETSAGNSAATAAPHPTPASYPQGTI 122 P PR RG GP R RA ++ G+ A A + + S + ++ Sbjct: 101 PGAPRARGSCGREPGPR-RRRAPSSAGKRPAAAARAAPPRQRSLARCLPRSVGSCVRPSV 159 Query: 123 SP--PQLPAPRPKRFGGKQRPLWRIRGWETTVARLPEPRVGKLGKGPPPRPAPP--GTRC 178 P P+ R R ++RPL + P P +LG PPR A P G+R Sbjct: 160 GPSLPRRHCRRHCRCHCRRRPLPK-----------PPPLQPRLGSASPPRLAAPLAGSRA 208 Query: 179 ---CPGARAAQLLREAAAAAQGLRAPAA------------RLPEPTRRAPG-RPGCL--- 219 P R + E + A GL P + R RR G R GC Sbjct: 209 PSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGGEERRVRGRRQGCALGS 268 Query: 220 -PTAAAAAADALWRSRRA 236 P A AA RRA Sbjct: 269 PPIPAGPAAPGRAGERRA 286 >gi|224465238 hypothetical protein LOC283999 [Homo sapiens] Length = 394 Score = 52.8 bits (125), Expect = 5e-07 Identities = 87/278 (31%), Positives = 101/278 (36%), Gaps = 47/278 (16%) Query: 80 LRGRA-KTTRGRSQGAGATETSAGN---SAATAAPHPTPASYPQGTISPPQ-----LPA- 129 LR R + + R+QG GA+ + S AA T + +PQG PQ LPA Sbjct: 68 LRSRGFREIKERAQGPGASPWGRWDWSPSPRFAARLSTSSPFPQGRAQRPQRGGVDLPAT 127 Query: 130 ---PRPK---RFGGKQRPLWRIRGWETTVARLPEPRVGKLGKGPP-PRPAPPGTRCC-PG 181 PR + R G R R R V RLP PR + +GP P P+PP R P Sbjct: 128 PGGPRGQCAGRSGDVLRRAGRRRARPPPVPRLPAPRAPRRPRGPATPDPSPPAGRPHGPA 187 Query: 182 ARAAQLLREAAAAAQGLRAPAARLPEPTRRAPGRPGCLP--------TAAAAAADALWRS 233 RAA R A LRAP R + PG G AA A AL Sbjct: 188 GRAAPGRRPGCTAQ--LRAPGRRGRQRLLVHPGGGGRRQWQRLARARRAALLALGALAHL 245 Query: 234 RRAP-----------LPPTEFLSPRRTRPRKHPERTRRPAQRLESG------CRGHCSRG 276 RR P L P P H R R+ RL G C G R Sbjct: 246 RRCPDTGGGQHLHQLLAPGLCGDGAAVWPAAHAGRPRQ--LRLVHGPGLGLLCLGGIQRN 303 Query: 277 APALAPPKLSPPFPCLAQSASRAAGARRALSASRGRRG 314 PAL+ P P L S S A G R R G Sbjct: 304 PPALSCLDPQPEPPNLWSSESPAGGRERGRLRPRAAEG 341 >gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] Length = 2752 Score = 52.8 bits (125), Expect = 5e-07 Identities = 89/348 (25%), Positives = 130/348 (37%), Gaps = 40/348 (11%) Query: 22 RYRSPTPL---------RPAKGKTICTRFGDKRSSGQAGNKSERELQARTPAPPRERGES 72 R RSP+P R + KT TR D+ S Q+ ++ + ++R+ R RG S Sbjct: 1759 RGRSPSPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGS 1818 Query: 73 S-SPRGPTLRGRAKTTRGRSQGAGATE-TSAGNSAATAAPHP--------TPASYPQGTI 122 R P + ++T+ R +G T TS S + +P P +PA++ + Sbjct: 1819 GYHSRSPARQESSRTSSRRRRGRSRTPPTSRKRSRSRTSPAPWKRSRSRASPATHRRSRS 1878 Query: 123 SPPQLPAPRPKRFGGKQRPLWRIRGWETT--VARLPEPRVGKLGKGPPPRPAPPGTRCCP 180 P + R + + P+ R R T R R + + PP TR Sbjct: 1879 RTPLISRRRSR---SRTSPVSRRRSRSRTSVTRRRSRSRASPVSRRRSRSRTPPVTRRRS 1935 Query: 181 GARAAQLLREAAAAAQGL--RAPAARLPEPTRRAPGRPGCLPTAAAAAADALWRSRRAPL 238 +R R + + + R +R P TRR R P + RSR +P+ Sbjct: 1936 RSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRR-SRSRTSPITRRRS-----RSRTSPV 1989 Query: 239 PPTEFLSPRRTRPRKHPERTRRPAQRLESGCRGHC-SRGAPALAPPKLS-PPFPCLAQSA 296 + RR+R R P RR R R SR PA+ S P +S Sbjct: 1990 ------TRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTPPAIRRRSRSRTPLLPRKRSR 2043 Query: 297 SRAAGARRALSASRGRRGLLGSGSLALPLPGCREPRQRLHGSDGAAGA 344 SR+ A R S SR R G SL P R SD + A Sbjct: 2044 SRSPLAIRRRSRSRTPRTARGKRSLTRSPPAIRRRSASGSSSDRSRSA 2091 Score = 49.3 bits (116), Expect = 5e-06 Identities = 88/340 (25%), Positives = 126/340 (37%), Gaps = 32/340 (9%) Query: 16 PSRKLGRYRSPTPLRPAKGKT-ICTRFGDKRSSGQAGNKSERELQARTPAPPRERGESSS 74 PSR++GR RSP + + ++ T+ G RS +S + P+ RG S S Sbjct: 477 PSRRMGRSRSPATAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRS 536 Query: 75 PRGP-TLRGRAKTTRGRSQGAGATETSAGNSAATAAPHP-TPASYPQGTISPPQLPAPRP 132 P+ P R R RGRS+ A + + + A TPA + S + PA R Sbjct: 537 PQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGR---SRSRTPARRR 593 Query: 133 KRFGGKQRPLWRIRGWETTVARLPEPRVGKLGKGPPPRPAPPGTRC-CPGARAAQLLREA 191 R R R R T AR G+ PA +R P R ++ A Sbjct: 594 SR----SRTPTRRRSRSRTPAR--------RGRSRSRTPARRRSRTRSPVRRRSRSRSPA 641 Query: 192 AAAAQGLRAPAARLPEPTRRAPGRPGCLPTAAAAAADALWRSRR-APLPPTEFLSPRRTR 250 + + AR R P R G + A RSR A + +PRR R Sbjct: 642 RRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGR 701 Query: 251 PRKHP------ERTRRPAQRLESGC---RGHCSRGAPALAPPKLSPPFPCLAQSASRAAG 301 R +R P +R SG R + SR + + SP S+ R+ Sbjct: 702 SRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRS 761 Query: 302 ARRALSASRGRRGLLGSGSLALPLPGCRE---PRQRLHGS 338 S ++ R L S S + P P + PR+ GS Sbjct: 762 LSSPRSKAKSRLSLRRSLSGSSPCPKQKSQTPPRRSRSGS 801 Score = 48.1 bits (113), Expect = 1e-05 Identities = 72/318 (22%), Positives = 113/318 (35%), Gaps = 50/318 (15%) Query: 16 PSRKLGRYRSPTPLRPAKGKTICTRFGDKRSS----------------GQAGNKSERELQ 59 P+R+ GR RS TP R + ++ R G RS G++G+ SER+ + Sbjct: 674 PARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNK 733 Query: 60 ARTPAPPRERGESSSPRGPTLRGRAKTTRGRS--QGAGATETSAGNSAATAAPHP----- 112 +RT R +SSP R ++ +R S + + S S + ++P P Sbjct: 734 SRTSQ--RRSRSNSSPEMKKSRISSRRSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQKSQ 791 Query: 113 TPASYPQGTISPPQLPA---PRPKRFGGKQRPLWRIR--GWETTVARLPEPRVGKLGKGP 167 TP + S P+ + PR R P + + ++ + P P+V G Sbjct: 792 TPPRRSRSGSSQPKAKSRTPPRRSRSSSSPPPKQKSKTPSRQSHSSSSPHPKVKS---GT 848 Query: 168 PPRPAP------------PGTRCCPGARAAQLLREAAAA---AQGLRAPAARLPEPTRRA 212 PPR P R C + L+ + G P + P R++ Sbjct: 849 PPRQGSITSPQANEQSVTPQRRSCFESSPDPELKSRTPSRHSCSGSSPPRVKSSTPPRQS 908 Query: 213 PGRPGCLPTAAAAAADALWRSRRAPLPPTEFLSPRRTRPRKHPERTRRPAQRLESGCRGH 272 P R A RS P+ RT PR+ R+ P +ES Sbjct: 909 PSRSSSPQPKVKAIISPRQRSHSGSSSPSPSRVTSRTTPRR--SRSVSPCSNVESRLLPR 966 Query: 273 CSRGAPALAPPKLSPPFP 290 S + K+ P P Sbjct: 967 YSHSGSSSPDTKVKPETP 984 Score = 47.4 bits (111), Expect = 2e-05 Identities = 85/365 (23%), Positives = 130/365 (35%), Gaps = 68/365 (18%) Query: 3 SVSGSDPQVLEEH---PSRKLGRYRSPTPLRPA--------------KGK---------- 35 S SGS P+V ++ P + G SP P PA KG+ Sbjct: 1596 SRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSST 1655 Query: 36 TICTRFGDKRSSGQAGNKSERELQARTPAPPRERGESSSP---RGPTLRGRAKTTRGRSQ 92 K + + G++S E + ++ PPR R SSP R L R+++ + Sbjct: 1656 ESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASSSPE 1715 Query: 93 GAGATETSAGNSAATAAPHP---TPASYPQGTISPPQL---------PAPRPKRFGGKQR 140 T S + ++P P + +S + + S P+ P+P+P+ G QR Sbjct: 1716 TRSRTPPRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPR---GLQR 1772 Query: 141 PLWRIRGWETTVARLPEPRVGKLGKGPPPRPAPPGTRCCPGARAAQLLREAAAAAQGLRA 200 R R +T R R + G +R +R+ R + R+ Sbjct: 1773 SRSRSRREKTRTTR----RRDRSGSSQSTSRRRQRSR----SRSRVTRRRRGGSGYHSRS 1824 Query: 201 PAARLPEPT--RRAPGRPGCLPT----AAAAAADALWRSRRAPLPP---------TEFLS 245 PA + T RR GR PT + + + A W+ R+ P T +S Sbjct: 1825 PARQESSRTSSRRRRGRSRTPPTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLIS 1884 Query: 246 PRRTRPRKHPERTRRPAQRLESGCRGHCSRGAPALAPPKLSPPFPCLAQSASRAAGARRA 305 RR+R R P RR R R SR +P S P + + R Sbjct: 1885 RRRSRSRTSPVSRRRSRSRTSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRR 1944 Query: 306 LSASR 310 S SR Sbjct: 1945 RSRSR 1949 Score = 44.3 bits (103), Expect = 2e-04 Identities = 74/331 (22%), Positives = 120/331 (36%), Gaps = 73/331 (22%) Query: 5 SGSDPQVLEEHPSRKLGRYRSP-------TPLRPAKG-------KTIC-TRFGDKRSSG- 48 S +P+ L + P + SP TP R G KT+ T G + SG Sbjct: 1482 SSPEPKALPQTPRPRSRSPSSPELNNKCLTPQRERSGSESSVDQKTVARTPLGQRSRSGS 1541 Query: 49 --------------QAGNKSERELQARTPAPPRERGESSSPRGPTLRGRAKTTRGRSQGA 94 ++ + S + +A+T P R+R S S P + +++ + RS+ Sbjct: 1542 SQELDVKPSASPQERSESDSSPDSKAKTRTPLRQRSRSGS--SPEVDSKSRLSPRRSRSG 1599 Query: 95 GATETSAGNSAATAAPHPTPASYPQGTISPPQLPAPRPKRFGGKQRPLWRIRG------- 147 + E AA A G+ S P+ AP P+ + R +G Sbjct: 1600 SSPEVKDKPRAAPRA--------QSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEG 1651 Query: 148 ---WETTVARLPEPRVGKLGKGPPPRP-----APPGTRCCPGA----RAAQLLREAAAAA 195 E++ P+ R + G P P PP R + R A+L R + +A+ Sbjct: 1652 SSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSAS 1711 Query: 196 QG-----------LRAPAARLPEPTRRAPGRPGCLPTAAAAAADALWRSRRAPLPPTEFL 244 R+P+ PEP ++ +A++ SRR P + Sbjct: 1712 SSPETRSRTPPRHRRSPSVSSPEPAEKS---RSSRRRRSASSPRTKTTSRRGRSPSPKPR 1768 Query: 245 SPRRTRPRKHPERTRRPAQRLESGCRGHCSR 275 +R+R R E+TR +R SG SR Sbjct: 1769 GLQRSRSRSRREKTRTTRRRDRSGSSQSTSR 1799 Score = 43.9 bits (102), Expect = 2e-04 Identities = 89/346 (25%), Positives = 127/346 (36%), Gaps = 61/346 (17%) Query: 17 SRKLGRYR-SPTPLRPAKGKTI-CTRFGDKRSSGQAGNKSERELQARTPAPPRERGESSS 74 +R+ R R SP R ++ +T TR +RS + R ++RTP PR+R S S Sbjct: 1990 TRRRSRSRTSPVTRRRSRSRTSPVTR---RRSRSRTPPAIRRRSRSRTPLLPRKRSRSRS 2046 Query: 75 PRGPTLRGRAKTTR--------GRSQGAGATETSAGNSA--ATAAPHPTPASYPQGTISP 124 P R R++T R RS A +++G+S+ + +A P ++ P Sbjct: 2047 PLAIRRRSRSRTPRTARGKRSLTRSPPAIRRRSASGSSSDRSRSATPPATRNHSGSRTPP 2106 Query: 125 PQLPAPRPKRFGG---KQRPLWRIR--------GWETTVARLPEPRVGKLGKGPPPRPAP 173 L + R F PL R R G T + + G + GP PR Sbjct: 2107 VALNSSRMSCFSRPSMSPTPLDRCRSPGMLEPLGSSRTPMSVLQQAGGSMMDGPGPRIPD 2166 Query: 174 PGTRCCPGARAAQLLREAAAA-------------AQGLRAPAARLPEPT-----RRAPGR 215 P A + A A A GL A +++P P R AP Sbjct: 2167 HQRTSVPENHAQSRIALALTAISLGTARPPPSMSAAGLAARMSQVPAPVPLMSLRTAPAA 2226 Query: 216 PGCLPTAAAAAADALWRSRRAPLPPTEF-LSPRRTRPRKHPERTRRPAQRLESGCRGHCS 274 AA+AA S R P PT L+ RT P R + Sbjct: 2227 NLASRIPAASAAAMNLASARTPAIPTAVNLADSRTPAAAAAMNLASP--------RTAVA 2278 Query: 275 RGAPALAPPKLSPPFPCLAQSASRAAGARRALSASRGRRGLLGSGS 320 A LA P+ +P P + + +R A ALS L GSG+ Sbjct: 2279 PSAVNLADPR-TPTAPAVNLAGARTPAALAALS-------LTGSGT 2316 Score = 42.7 bits (99), Expect = 5e-04 Identities = 66/278 (23%), Positives = 97/278 (34%), Gaps = 27/278 (9%) Query: 57 ELQARTPAPPRERGESSSPRGPTLRGRAKTTRGRSQGAGATETSAGNSAATAAPHPTPAS 116 E +P P S P P A TR RS + +S+ ++ P P P Sbjct: 372 ERHGGSPQPLATTPLSQEPVNPP--SEASPTRDRSPPKSPEKLPQSSSSESSPPSPQPTK 429 Query: 117 YPQGTISPPQLPAPRP----------------KRFGGKQRPLWRIRGWETTVARLPEPRV 160 + S P+ P P P + G +R + R P Sbjct: 430 VSRHASSSPESPKPAPAPGSHREISSSPTSKNRSHGRAKRDKSHSHTPSRRMGRSRSPAT 489 Query: 161 GKLGKGPPPRPAPPGTRCCPGARAAQLLREAAAAAQG-LRAPAARLPEPTRRAPGRPGCL 219 K G+ R P R +R+ Q R +A G R+P R + + PG Sbjct: 490 AKRGRS---RSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSR 546 Query: 220 PTAAAAAADALWRSR-RAPLPPTEFLSPRRTRPRKHPERTRRPAQRLESGCRGHCSRGAP 278 T + + R R + P T S RT R+ R+R PA+R S R R + Sbjct: 547 NTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARR-RSRSRTPTRRRSR 605 Query: 279 ALAPPKLS---PPFPCLAQSASRAAGARRALSASRGRR 313 + P + P +S +R+ RR+ S S RR Sbjct: 606 SRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARR 643 Score = 41.2 bits (95), Expect = 0.001 Identities = 41/174 (23%), Positives = 74/174 (42%), Gaps = 28/174 (16%) Query: 3 SVSGSDPQVLEEHPSRKLGRYRSPTPLRPAKGKTICTRFGDKRSSGQAGNKSERELQART 62 S S S+ L P L R SPTP + + + G E T Sbjct: 2559 SSSDSEGSSLPVQPEVALKRVPSPTPA--------------PKEAVREGRPPEP-----T 2599 Query: 63 PAPPRERGESSSPRGPTLRGRAKTTRGRSQGAGATETSAGNSAATAAPHPTPAS-YPQGT 121 PA + R SSS + + ++ S + ++ +S+ +S+++++ P+PA PQ Sbjct: 2600 PAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQAL 2659 Query: 122 ISP--PQLPAPRPKRFGGKQRPLWRIRGWETTVARLPEPRVGKLGKGPPPRPAP 173 P P+ P P +R ++P+ +R +++ P R + P P+P+P Sbjct: 2660 PKPASPKKPPPGERRSRSPRKPIDSLRD-SRSLSYSPVER-----RRPSPQPSP 2707 Score = 40.0 bits (92), Expect = 0.003 Identities = 64/284 (22%), Positives = 118/284 (41%), Gaps = 22/284 (7%) Query: 16 PSRKLGRYRSPTPLRP-AKGKTICTRFGDKRSSGQAGNKSER---ELQARTPAPPRERGE 71 P+R+ GR RS TP R ++ +T R R+ + G R ++RT +P R R Sbjct: 578 PARR-GRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSR 636 Query: 72 SSSPRGPTLRGRAKT--TRGRSQGAGATETSAGNSAATAAPHPTPASYPQGTISPPQLPA 129 S SP + R R++T RGRS+ T G S + + S + + + Sbjct: 637 SRSPARRSGRSRSRTPARRGRSR--SRTPARRGRSRSRTPARRSGRSRSRTPARRGRSRS 694 Query: 130 PRPKRFGGKQRPLWRIRGWETTVARLPEPRVGKLGKGPPPRPAPPGTRCCPGARAAQLLR 189 P+R + R L R RG + +R P+ R G+ G + ++ + ++ ++ Sbjct: 695 RTPRRGRSRSRSLVR-RG--RSHSRTPQRR-GRSGSSSERKNKSRTSQRRSRSNSSPEMK 750 Query: 190 EAAAAAQGLRAPAARLPEPTRRAPGRPGCLPTAAAAAADALWRSRRAPLPPTEFLSPRRT 249 ++ +++ R+ L P +A R + + ++ +S+ P S + Sbjct: 751 KSRISSRRSRS----LSSPRSKAKSRLSLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPKA 806 Query: 250 RPRKHPERTRR-----PAQRLESGCRGHCSRGAPALAPPKLSPP 288 + R P R+R P Q+ ++ R S +P +PP Sbjct: 807 KSRTPPRRSRSSSSPPPKQKSKTPSRQSHSSSSPHPKVKSGTPP 850 Score = 37.7 bits (86), Expect = 0.015 Identities = 87/392 (22%), Positives = 133/392 (33%), Gaps = 100/392 (25%) Query: 18 RKLGRYRSPTPLRPAKGK---------TICTRFGDKRSSGQAGNKSERELQA---RTPAP 65 R+ RSPTP + K K + R K+SS + ++SE E + R+P P Sbjct: 175 RESSSSRSPTPKQKKKKKKKDRGRRSESSSPRRERKKSSKKKKHRSESESKKRKHRSPTP 234 Query: 66 ---------PRERGESSSPRGPTLRGR----------AKTTRGRSQGA------------ 94 R+R S++P + R + T+R RS+ A Sbjct: 235 KSKRKSKDKKRKRSRSTTPAPKSRRAHRSTSADSASSSDTSRSRSRSAAAKTHTTALAGR 294 Query: 95 -------------------GATETSAGNSAATAAPHPT-----------------PASYP 118 G T T +S TA P+ P+ P Sbjct: 295 SPSPASGRRGEGDAPFSEPGTTSTQRPSSPETATKQPSSPYEDKDKDKKEKSATRPSPSP 354 Query: 119 QGTISPPQLPAPRP---KRFGGKQRPLWRI----------RGWETTVARLPEPRVGKLGK 165 + + + P+ PAP P +R GG +PL T R P KL + Sbjct: 355 ERSSTGPEPPAPTPLLAERHGGSPQPLATTPLSQEPVNPPSEASPTRDRSPPKSPEKLPQ 414 Query: 166 GPPPRPAPPGTRCCPGARAAQLLREA--AAAAQGLRAPAARLPEPTRRAPGRPGCLPTAA 223 +PP + +R A E+ A A G + P R+ GR + + Sbjct: 415 SSSSESSPPSPQPTKVSRHASSSPESPKPAPAPGSHREISSSPTSKNRSHGRAKRDKSHS 474 Query: 224 AAAADALWRSRRAPLPPTEFLSPRRTRPRKHPERTRRPAQRLESGCRGHCSRGAPALAPP 283 + + RS R+P S RT ++ R+R P R + +P Sbjct: 475 HTPSRRMGRS-RSPATAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRGR 533 Query: 284 KLSPPFPCLAQSAS-----RAAGARRALSASR 310 SP P ++S + R+ ARR S SR Sbjct: 534 SRSPQRPGWSRSRNTQRRGRSRSARRGRSHSR 565 Score = 31.2 bits (69), Expect = 1.4 Identities = 65/315 (20%), Positives = 110/315 (34%), Gaps = 27/315 (8%) Query: 17 SRKLGRYRSPTPLRPAKGKTICTRFGDKRSSGQAGNKSERELQARTPAPPRERGESSSPR 76 +R+ R R+ +P+ + ++ + +RS + + R ++RT R R S +P Sbjct: 1966 TRRRSRSRT-SPITRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTPP 2024 Query: 77 GPTLRGRAKT-----TRGRSQG---------AGATETSAGNSAATAAPHPTPASYPQGTI 122 R R++T R RS+ + T+ G + T +P G+ Sbjct: 2025 AIRRRSRSRTPLLPRKRSRSRSPLAIRRRSRSRTPRTARGKRSLTRSPPAIRRRSASGSS 2084 Query: 123 SPPQLPA--PRPKRFGGKQRPLWRIRGWETTVARLPEPRVGKLGKGPPPRPAPPGTRCCP 180 S A P + G + P + + P + P R PG Sbjct: 2085 SDRSRSATPPATRNHSGSRTPPVALNSSRMSCFSRP-----SMSPTPLDRCRSPGMLEPL 2139 Query: 181 GARAAQLLREAAAAAQGLRAPAARLPEPTRRA-PGRPGCLPTAAAAAADALWRSRRAPLP 239 G+ + A + P R+P+ R + P A A A +L +R P Sbjct: 2140 GSSRTPMSVLQQAGGSMMDGPGPRIPDHQRTSVPENHAQSRIALALTAISLGTARPPPSM 2199 Query: 240 PTEFLSPRRTR-PRKHPERTRRPAQRLESGCRGHCSRGAPALAPPKLSPPFPC---LAQS 295 L+ R ++ P P + R A R + A +P P LA S Sbjct: 2200 SAAGLAARMSQVPAPVPLMSLRTAPAANLASRIPAASAAAMNLASARTPAIPTAVNLADS 2259 Query: 296 ASRAAGARRALSASR 310 + AA A L++ R Sbjct: 2260 RTPAAAAAMNLASPR 2274 Score = 30.8 bits (68), Expect = 1.9 Identities = 74/311 (23%), Positives = 108/311 (34%), Gaps = 62/311 (19%) Query: 60 ARTPAPPRERGESSSPRGPTLRGRAKTTRGRSQGAGATETSAGNSAATAAPHPTPASY-- 117 ++ PAP ++P L R + + T A +A A TPA+ Sbjct: 2209 SQVPAPVPLMSLRTAPAA-NLASRIPAASAAAMNLASARTPAIPTAVNLADSRTPAAAAA 2267 Query: 118 -----PQGTISPPQLPAPRPKRFGGKQRPLWRIRGWETTVARLPEPRVGKLGKGPPPRPA 172 P+ ++P + P+ P + G T A + G G PP A Sbjct: 2268 MNLASPRTAVAPSAVNLADPRT---PTAPAVNLAGARTPAALAA---LSLTGSGTPPTAA 2321 Query: 173 --PPGTRCCPGARAAQLL--REAAAAAQ----GLRAPAARLPEPTRRAPGRPGCLPTAAA 224 P +R +A L+ R A A A G R AA P A P Sbjct: 2322 NYPSSSRTPQAPASANLVGPRSAHATAPVNIAGSRTAAALAPASLTSARMAP-------- 2373 Query: 225 AAADALWRSRRAPLPPTEFLSPR---------RTR-PRKHPERTRRPAQRLESGCRGHCS 274 A + A S R PL E +S R R+R P P ++R ++R S Sbjct: 2374 ALSGANLTSPRVPLSAYERVSGRTSPPLLDRARSRTPPSAPSQSRMTSERAPSPSSRMGQ 2433 Query: 275 RGAPALAPPKLSPP-----------FPCL-------AQSASRAAGARRALSASRGRRGLL 316 + +L PP P CL A S S ++GA ++S G Sbjct: 2434 APSQSLLPPAQDQPRSPVPSAFSDQSRCLIAQTTPVAGSQSLSSGAVATTTSSAGDH--- 2490 Query: 317 GSGSLALPLPG 327 +G L++P PG Sbjct: 2491 -NGMLSVPAPG 2500 Score = 30.4 bits (67), Expect = 2.4 Identities = 23/91 (25%), Positives = 35/91 (38%), Gaps = 9/91 (9%) Query: 51 GNKSERELQARTPAPPRERGESSSPRGPTLRGRAKTTRGRSQGAGATETSAGNS------ 104 G + L A PA R SSS + + ++ S ++ S G+S Sbjct: 2514 GAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPE 2573 Query: 105 -AATAAPHPTPASYPQGTISPPQLPAPRPKR 134 A P PTPA P+ + + P P P + Sbjct: 2574 VALKRVPSPTPA--PKEAVREGRPPEPTPAK 2602 >gi|239748752 PREDICTED: hypothetical protein XP_002346787 [Homo sapiens] Length = 278 Score = 52.4 bits (124), Expect = 6e-07 Identities = 54/188 (28%), Positives = 66/188 (35%), Gaps = 30/188 (15%) Query: 63 PAPPRERGESSSPRGPTLRGRAKTTRGRSQGAGATETSAGNSAATAAPHPTPASYPQGTI 122 P PP R + RGP +GR GR+ A SA TA P P P Sbjct: 40 PRPPPARLPRNGRRGPLWKGRGPA--GRAPAA---------SAETALPRPREPPEPGAGP 88 Query: 123 SPPQLPAPRPKRFGGKQRPLWRIRGWETTVARLPEP-------RVGKL----GKGPP--- 168 SP + P PR R P ++ W + R P R+ L GPP Sbjct: 89 SPKRSPPPRAPRASSLAAPEPQVGDWTSREGRRGGPCLPGARRRLFSLSVSRSSGPPRAR 148 Query: 169 ---PRPAPPGTRCCPGARAAQLLREAAAAAQGLRAPAARLPEPTRRAPGRPGCLPTAAAA 225 P PA G G A + A A AP P R PG P CL + Sbjct: 149 SCAPHPAREGMATTRGPEAGLRVSGRGARAGSSTAPTRAQASPAR--PGFPPCLRSPPCP 206 Query: 226 AADALWRS 233 A+ +RS Sbjct: 207 ASSRAFRS 214 Score = 37.0 bits (84), Expect = 0.026 Identities = 38/116 (32%), Positives = 49/116 (42%), Gaps = 10/116 (8%) Query: 199 RAPAARLPEPTRRAP---GRPGCLPTAAAAAADALWRSRRAPLPPTEFLSPRRTRPRKHP 255 R P ARLP RR P GR AA+A AL R R P P SP+R+ P + P Sbjct: 41 RPPPARLPRNGRRGPLWKGRGPAGRAPAASAETALPRPREPP-EPGAGPSPKRSPPPRAP 99 Query: 256 ERTRRPAQRLESG--CRGHCSRGAPALAPPKLSPPFPCLAQSASRAAGARRALSAS 309 + A + G RG P L + + S SR++G RA S + Sbjct: 100 RASSLAAPEPQVGDWTSREGRRGGPCLPGARRR----LFSLSVSRSSGPPRARSCA 151 >gi|239757987 PREDICTED: hypothetical protein [Homo sapiens] Length = 445 Score = 51.6 bits (122), Expect = 1e-06 Identities = 83/303 (27%), Positives = 111/303 (36%), Gaps = 56/303 (18%) Query: 29 LRPAKGKTICTRFGDKRSSGQAGNKSERELQARTPAP---PRERGESS---SPRGPTLRG 82 LR ++ + TR G + ++ + N+ E + P P G+ + G LRG Sbjct: 125 LRKSRARLPRTRPGREDAAVRGRNRDPAEPGSLRPTSLGFPARAGQGQVQGAAPGRRLRG 184 Query: 83 RAKTTRGRSQGAGATETSAGNSAATA------------APHPTPASYPQGTISPPQLPAP 130 KT GRS +G + AG+ AATA P P PA P PP PA Sbjct: 185 EPKTPPGRSGPSGGVRSGAGHRAATAEHQLGAGFSVRNGPGP-PARLPPAPPGPPLRPA- 242 Query: 131 RPKRFGGKQRPLWRIRGWETTVARLPEPRV---GKLGKGPPP--RP-----APPGTRCC- 179 RP R R+ E +LP P + PPP RP PP T C Sbjct: 243 RP--HNPTSRGPGRLLTCEPPSRKLPPPLPLCRSRWVLAPPPTVRPRLRVLTPPFTLLCA 300 Query: 180 --------PGARAAQLL-REAAAAAQGLRAPAARLPEPTRRAPGRPGCLPTAAAAAADAL 230 P R+A L+ R A + P++R + PT A +AD Sbjct: 301 LPERGSRTPSTRSAVLVDRVAGLGTELTLTPSSRRAHGSHPLSSERQAAPTRAFCSAD-- 358 Query: 231 WRSRRAPLPPTEFLSPRRTRPRKHPERTRRPAQRLESGCRGHCSRGAPALAPPKLSP-PF 289 PLP P P+ + R+P RL R + GAP P P P Sbjct: 359 ------PLPRPPSFVPSLPSPQAQGQAVRQP--RL---LRAALALGAPRGRTPSPGPGPA 407 Query: 290 PCL 292 P L Sbjct: 408 PAL 410 Score = 33.5 bits (75), Expect = 0.29 Identities = 61/234 (26%), Positives = 73/234 (31%), Gaps = 29/234 (12%) Query: 105 AATAAPHPTPASYPQGTISPPQLPAPRPKRFGGKQRPLWRIRGWETTVARLPEPRVGK-- 162 A AP P S T+ + KR G KQR G ARL V Sbjct: 18 ATCQAPFPYIVSAQLPTLDKQETLVAEEKR-GWKQRGR---NGENADTARLFGTTVYTFE 73 Query: 163 -LGKGPPPRPAPPGTRCCPGARAAQLLREAAAAAQGLRAPAARLPEPTRRAPGRPGC--- 218 LG PP R P +R PG A R + +P PG PG Sbjct: 74 VLGALPPDRSPTPRSRVSPGVTGL-----AVGPGNPKRCQRSGVPY---EGPGAPGGQQL 125 Query: 219 ------LPTAAAAAADALWRSRRAPLPPTEFLSPRRTRPRKHPERTRRPAQRLESGCRGH 272 LP DA R R P E P RP R +++ G Sbjct: 126 RKSRARLPRTRPGREDAAVRGRNRD--PAE---PGSLRPTSLGFPARAGQGQVQGAAPGR 180 Query: 273 CSRGAPALAPPKLSPPFPCLAQSASRAAGARRALSASRGRRGLLGSGSLALPLP 326 RG P P + P + + RAA A L A R G + P P Sbjct: 181 RLRGEPKTPPGRSGPSGGVRSGAGHRAATAEHQLGAGFSVRNGPGPPARLPPAP 234 >gi|40789265 beta 1,4-N-acetylgalactosaminyltransferase-transferase 4 [Homo sapiens] Length = 1039 Score = 51.6 bits (122), Expect = 1e-06 Identities = 62/200 (31%), Positives = 75/200 (37%), Gaps = 46/200 (23%) Query: 109 APHPTPASYPQGTISPPQLPAPRPKRFGGKQRPLWRIRGWETTVARLPEPRVGKLGKGPP 168 +P P + P T++PP P PR GG R R W AR P P LG+ PP Sbjct: 461 SPAPAAPAQPGATLAPPTPPRPRD---GGTPRHS-RALSWAARAAR-PLPLF--LGRAPP 513 Query: 169 PRPA---PPG----TRCCPGARAAQLLREAAAAAQGLRAPAARLPEPTRRAPGRPGCLPT 221 PRPA PP TR PG RA+ RAPA R P P PG Sbjct: 514 PRPAVEQPPPKVYVTRVRPGQRASP------------RAPAPRAPWPP-----FPGVF-- 554 Query: 222 AAAAAADALWRSRRAPLPPTEFLSPRRTRPRKHPERTRRP-AQRLESGCRGHCSRGAPAL 280 PLP + +P R PR H RT P A + R ++G Sbjct: 555 -----------LHPRPLPRVQLRAPPRP-PRPHGRRTGGPQATQPRPPARAQATQGGREG 602 Query: 281 APPKLSPPFPCLAQSASRAA 300 L P P + + S A Sbjct: 603 QARTLGPAAPTVDSNLSSEA 622 Score = 42.0 bits (97), Expect = 8e-04 Identities = 47/169 (27%), Positives = 61/169 (36%), Gaps = 24/169 (14%) Query: 58 LQARTPAPPRERGESSSPRGPTLRGR--AKTTRGRSQGAGATETSAGNSAATAAPHPTPA 115 L+ APPR +S +P P G A T R + G S S A A P P Sbjct: 447 LEPTEAAPPRSGPQSPAPAAPAQPGATLAPPTPPRPRDGGTPRHSRALSWAARAARPLPL 506 Query: 116 SYPQGTISPPQLPAPRPKRFGGKQRPLWRIRGWETTVARLPEPR---------------V 160 + P + P PK + + R+R + R P PR + Sbjct: 507 FLGRAPPPRPAVEQPPPKVY------VTRVRPGQRASPRAPAPRAPWPPFPGVFLHPRPL 560 Query: 161 GKLGKGPPPRPAPPGTRCCPGARAAQLLREA-AAAAQGLRAPAARLPEP 208 ++ PPRP P R G +A Q A A A QG R AR P Sbjct: 561 PRVQLRAPPRPPRPHGRRTGGPQATQPRPPARAQATQGGREGQARTLGP 609 >gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens] Length = 2303 Score = 51.6 bits (122), Expect = 1e-06 Identities = 68/249 (27%), Positives = 87/249 (34%), Gaps = 33/249 (13%) Query: 60 ARTPAPPRERGESSSPRGPTLRGR----AKTTRGRSQGAGATETSAGNSAATAAPHP--- 112 AR P RG + + GP RG + S G+ +++ S T Sbjct: 1945 ARAVPEPGPRGRAGTEAGPGARGGRLGLVRVASALSSGSESSDRSGFRRQLTFIKESPGL 2004 Query: 113 ----TPASYPQGTISPPQLPAPRPKRFGGKQRPLWRIRGWETTVARLPEPRVGKLGKGPP 168 + S + S PQ +PR R L R E A PR G P Sbjct: 2005 RRRRSELSSAESAASAPQGASPRRGRPALPAVFLCSSRCEELRAA----PRQGPA----P 2056 Query: 169 PRPAPPGTRCCPGARAAQLLREAAAAAQGLRAPAARLPEPTRRAPGRP---------GCL 219 R PP R PG R A+ + + +RAPAAR PE +R P G + Sbjct: 2057 ARQRPPAARPSPGERPARRTTSESPSRLPVRAPAAR-PETVKRYASLPHISVARRPDGAV 2115 Query: 220 PTAAAAAADALWRSRRAPLPPTEFLSP----RRTRPRKHPERTRRPAQRLESGCRGHCSR 275 P A A+A A S P P +P RR R P R RG Sbjct: 2116 PAAPASADAARRSSDGEPRPLPRVAAPGTTWRRIRDEDVPHILRSTLPATALPLRGSTPE 2175 Query: 276 GAPALAPPK 284 APA PP+ Sbjct: 2176 DAPAGPPPR 2184 Score = 47.0 bits (110), Expect = 3e-05 Identities = 86/327 (26%), Positives = 120/327 (36%), Gaps = 71/327 (21%) Query: 44 KRSSGQAGNKSERELQARTPAPPRERGESSSPRGPTL-RGRAKTTRGRSQGAGATETSAG 102 +++ G+ G S R + R A + G SP GP RG KTT G Sbjct: 1739 RQAEGEMG--SARRPEKRGAASVKTSGSPRSPAGPEKPRGTQKTTPG-------VPAVLR 1789 Query: 103 NSAATAAPHPTPASYPQGT---------ISPP---QLPAPRPKRFGGKQRPLWRIRGWET 150 P P P + P+GT ++PP Q AP G+QR R +T Sbjct: 1790 GRTVIYVPSPAPRAQPKGTPGPRATPRKVAPPCLAQPAAPAKVPSPGQQRSRSLHRPAKT 1849 Query: 151 T-VARLPEPRVGKLGKGPPPRPAPPGTRCCPGARAAQLLREAAAAAQGLRAPAARLPEPT 209 + +A L + PPR A P R L + +++ +PA++ P P Sbjct: 1850 SELATLSQ----------PPRSATPPAR----------LAKTPSSSSSQTSPASQ-PLPR 1888 Query: 210 RRAPGRPGCLPTAAAAAADALWRSRRAPLPPTEFLSPRRTRPRKHPERTRRPAQRLESGC 269 +R P AA AL +P+P T P RT K +T+R R+ Sbjct: 1889 KRPP---------VTQAAGALPGPGASPVPKT----PARTLLAKQ-HKTQRSPVRIPFMQ 1934 Query: 270 RGHCSRGAPAL--APPKLSPPFPCLAQSASRAAGARRAL----------SASRGRRGLLG 317 R RG P L A P+ P ++ A G R L S S R G Sbjct: 1935 R-PARRGPPPLARAVPEPGPRGRAGTEAGPGARGGRLGLVRVASALSSGSESSDRSGFRR 1993 Query: 318 SGSLALPLPGCREPRQRLHGSDGAAGA 344 + PG R R L ++ AA A Sbjct: 1994 QLTFIKESPGLRRRRSELSSAESAASA 2020 >gi|23510413 sorting nexin 26 [Homo sapiens] Length = 1126 Score = 50.1 bits (118), Expect = 3e-06 Identities = 88/338 (26%), Positives = 128/338 (37%), Gaps = 52/338 (15%) Query: 3 SVSGSDPQV----LEEHPSRKLGRYRSPT-PLRPAKGKTICTRFGDKRSSGQA--GNKSE 55 S++GS P LEE +R GR +PT P P + R +R Q G S Sbjct: 532 SLAGSCPSTRLLTLEEAQARTQGRLGTPTEPTTPKAPASPAERRKGERGEKQRKPGGSSW 591 Query: 56 RELQA--RTPAPPRER-----GESSSPRGP--------TLRGRAKTTRGRSQGAGATETS 100 + A R P+ PR++ G + +P P TLR SQ +GA Sbjct: 592 KTFFALGRGPSVPRKKPLPWLGGTRAPPQPSGSRPDTVTLRSAKSEESLSSQASGAELLG 651 Query: 101 AGNSAATAAPHPTPASYPQGTISPPQLP-----APRPKRFGGKQRPLWRIRGWETTV--- 152 AG + A+A PTPA P ++ P +P A P +Q ++RG + + Sbjct: 652 AGGAPASAT--PTPALSPGRSLRPHLIPLLLRGAEAPLTDACQQEMCSKLRGAQGPLGPD 709 Query: 153 --ARLPEPRVGKL--GKGPPPRPAPPG--TRCCPGARAAQLLREAAAAAQGLRAPAARLP 206 + LP P + L G PPP P P RA Q+ + + G PA++ P Sbjct: 710 MESPLPPPPLSLLRPGGAPPPPPKNPARLMALALAERAQQVAEQQSQQECGGTPPASQSP 769 Query: 207 -------EPTRRAPGRPGCLPTAAAAAADALWRSRRAPLPPTEFLSPRRTRPRKHPERTR 259 E G G P + A W P P + R ++ +R Sbjct: 770 FHRSLSLEVGGEPLGTSGSGPPPNSLAHPGAWVPGPPPYLPRQQSDGSLLRSQRPMGTSR 829 Query: 260 R----PAQ---RLESGCRGHCSRGAPALAPPKLSPPFP 290 R PAQ +L +G G + A A +P + P Sbjct: 830 RGLRGPAQVSAQLRAGGGGRDAPEAAAQSPCSVPSQVP 867 >gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo sapiens] Length = 1487 Score = 49.7 bits (117), Expect = 4e-06 Identities = 87/334 (26%), Positives = 110/334 (32%), Gaps = 50/334 (14%) Query: 26 PTPLRPAKGKTICTRFGDKRSSGQAGNKSERELQARTPAPPRERGESSSPRGPTLRGRAK 85 P P PA + GDK G G + R+ + TP P G P P L G Sbjct: 122 PGPQGPAGEQGPRGDRGDKGEKGAPGPRG-RDGEPGTPGNPGPPGPPGPPGPPGLGGNFA 180 Query: 86 TTRGRSQGAGATETSAGNSAATAAPHPTPASYPQGTISPPQLPAPRPKRFGGKQRPLWRI 145 +Q AG + AG + P P+G P P P+ Sbjct: 181 -----AQMAGGFDEKAGGAQLGVMQGPMGPMGPRGPPGPAGAPGPQ-------------- 221 Query: 146 RGWETTVARLPEPRV-GKLG-KGPPPRPAPPGTRCCPGARAAQLLREAAAAAQGLRAPAA 203 G++ EP V G +G +GPP P PG G + A +G P Sbjct: 222 -GFQGNPGEPGEPGVSGPMGPRGPPGPPGKPGDDGEAG-------KPGKAGERGPPGPQG 273 Query: 204 RLPEPTRRAPGRPGCLPTAAAAAADALWRSRRAPL------PPTEFLSPRRTRPRKHPER 257 P PG PG D AP P E SP PR P Sbjct: 274 ARGFPG--TPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGE 331 Query: 258 TRRPAQRLESGCRGHCSRGAPALAP----PKLSPPFPCLAQSASRAAG--ARRALSASRG 311 R +G RG+ + PA P P P FP A A AG R ++G Sbjct: 332 RGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPG-APGAKGEAGPTGARGPEGAQG 390 Query: 312 RRGLLGSGSLALPLPGCREPRQRLHGSDGAAGAR 345 RG G+ P P G+DG GA+ Sbjct: 391 PRGEPGTPGSPGPAGASGNP-----GTDGIPGAK 419 Score = 39.3 bits (90), Expect = 0.005 Identities = 84/327 (25%), Positives = 103/327 (31%), Gaps = 81/327 (24%) Query: 42 GDKRSSGQAGNKSERELQARTPAPPRERGE--------SSSPRGPT----LRGRAKTTRG 89 G + SG G E LQ PP E+GE + P GP RG Sbjct: 930 GARGDSGPPGRAGEPGLQGPA-GPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQ 988 Query: 90 RSQ-GAGATETSAGNSAATAAPHPTPASYPQGTISPPQLPAPRPKRFGGKQRPLWRIRGW 148 R + G +G AP + P G + PP L P Sbjct: 989 RGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGP------------------ 1030 Query: 149 ETTVARLPEPRVGKLGKGPPPRPAPPGTRCCPGARAAQLLREAAAAAQGLRAPAARLPEP 208 G P R PG PG R+ AA +G R + P Sbjct: 1031 ----------------AGEPGREGSPGADGPPG-------RDGAAGVKGDRGETGAVGAP 1067 Query: 209 TRRAPGRPGCLPTAAAAA--ADALWRSRRAPLPPTEFLSPRRTR----PRKHPERTRRPA 262 APG PG A D + P+ P+ R + PR P Sbjct: 1068 --GAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPG 1125 Query: 263 QRLESGCRGHCS-RGAPALAPPKLSPPFPCLAQSASRAAGARRALSASRGRRGLLG---- 317 +R G RG +G P PP P Q AS AG S RG G +G Sbjct: 1126 ERGLKGHRGFTGLQGLP-------GPPGPSGDQGASGPAGP----SGPRGPPGPVGPSGK 1174 Query: 318 SGSLALPLP-GCREPRQRLHGSDGAAG 343 G+ +P P G PR R G G AG Sbjct: 1175 DGANGIPGPIGPPGPRGR-SGETGPAG 1200 Score = 33.9 bits (76), Expect = 0.22 Identities = 81/324 (25%), Positives = 101/324 (31%), Gaps = 51/324 (15%) Query: 42 GDKRSSGQAGNKSERELQARTPAPPRERGESSSPRGPTLRGRAKTTRGRS--QGAGATET 99 GD +G+ G ER PP +G P P L G K RG GA Sbjct: 252 GDDGEAGKPGKAGER-------GPPGPQGARGFPGTPGLPG-VKGHRGYPGLDGAKGEAG 303 Query: 100 SAGNSAATAAPHPTPASYPQGTISPPQLPAPRPKRFGGKQRPLWRIRGWETTVARLPEPR 159 + G + +P + P G P LP R + T A R Sbjct: 304 APGVKGESGSPGENGSPGPMG---PRGLPGERGR----------------TGPAGAAGAR 344 Query: 160 VGKLGKGPPPRPAPPGTRCCPGARAAQLLREAAAAAQGLRAP-AARLPEPTRRAPGRPGC 218 GP P P G PG A + A G R P A+ P PG PG Sbjct: 345 GNDGQPGPAGPPGPVGPAGGPGFPGAPGAK-GEAGPTGARGPEGAQGPRGEPGTPGSPGP 403 Query: 219 LPTAAAAAADALWRSRRAPLPPTEFLSPRRTRPR--KHPERTRRP----AQRLESGCRGH 272 + D + ++ + P +P PR P+ P Q E G G Sbjct: 404 AGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGF 463 Query: 273 CSRGAPALAPPKLSP---PFPCLAQSASRAAGARRALS--------ASRGRRGLLGSGSL 321 P P P P P + A G + + G RG G L Sbjct: 464 KGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGL 523 Query: 322 ALP--LPGCREPRQRLHGSDGAAG 343 A P PG R P L G GA G Sbjct: 524 AGPKGAPGERGP-SGLAGPKGANG 546 Score = 33.9 bits (76), Expect = 0.22 Identities = 86/335 (25%), Positives = 103/335 (30%), Gaps = 71/335 (21%) Query: 66 PRERGESSSPRGPTLRGR-AKTTRGRSQGAGATETSAGNSAATAAPHPT-------PASY 117 P + GE P P LRG K + G AG AP P+ P Sbjct: 614 PGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGP 673 Query: 118 P-----------QGTISPPQLPAPRPKR-FGGKQ-----RPLWRIRGWETTVARLPEPRV 160 P G P L PR +R F G++ + L RG T P+ Sbjct: 674 PGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGT-DGPKG 732 Query: 161 GKLGKGPPPRPAPPGTRCCPGARAAQLLR--------------EAAAAAQGLRAPAARLP 206 GPP PPG + PG R A + E A G R + Sbjct: 733 ASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIG 792 Query: 207 EP-------TRRAPGRPGCLPTAAAAAADALWRSRRAPLPPTEFLSPRRTRPRKHPERTR 259 P + G PG +A A A R P P F P P Sbjct: 793 PPGPAGANGEKGEVGPPGPAGSAGARGAPG-ERGETGPPGPAGFAGP--------PGADG 843 Query: 260 RPAQRLESGCRGH-CSRGAPALAPPKLSPPFPCLAQSASRAAGARRA--------LSASR 310 +P + E G G GAP P P P + GAR A + Sbjct: 844 QPGAKGEQGEAGQKGDAGAPGPQGPS-GAPGPQGPTGVTGPKGARGAQGPPGATGFPGAA 902 Query: 311 GRRGLLGSGSLALPLPGCREPRQRLHGSDGAAGAR 345 GR G GS P PG P G DG GAR Sbjct: 903 GRVGPPGSNGNPGP-PGPPGP----SGKDGPKGAR 932 Score = 32.3 bits (72), Expect = 0.64 Identities = 41/159 (25%), Positives = 56/159 (35%), Gaps = 20/159 (12%) Query: 25 SPTPLRPAKGKTICTRFGDKRSSGQAGNKSERELQARTPAPPR-ERGESSSPRGPTLRGR 83 SP P P + G + G +G R +Q P PR ++GE+ P L+G Sbjct: 1075 SPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQG--PQGPRGDKGEAGEPGERGLKGH 1132 Query: 84 AKTTRGRSQGAGATETSAGNSAATAAPHPTPASYPQGTISPPQLPAPRPKRFGGKQRPLW 143 T QG +G+ A+ P+ P G + P G P+ Sbjct: 1133 RGFTG--LQGLPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGAN-----GIPGPIG 1185 Query: 144 RIRGWETTVARLPEPRVGKLGK-GPPPRPAPPGTRCCPG 181 P R G+ G GPP P PPG PG Sbjct: 1186 PPG---------PRGRSGETGPAGPPGNPGPPGPPGPPG 1215 Score = 28.5 bits (62), Expect = 9.2 Identities = 69/260 (26%), Positives = 86/260 (33%), Gaps = 27/260 (10%) Query: 104 SAATAAPHPTPASYPQGTISP---PQLPAPRPKRFGGKQRPLWRIRGWETTVARLPEPRV 160 + A+ P P G I P+ P P P+ G+Q P A P R Sbjct: 94 ATASGQPGPKGQKGEPGDIKDIVGPKGP-PGPQGPAGEQGPRGDRGDKGEKGAPGPRGRD 152 Query: 161 GKLGK----GPPPRPAPPGTRCCPGARAAQLLREAAAAAQGLRAPAARLPEPTRRAPGRP 216 G+ G GPP P PPG G AAQ+ A G + + P G P Sbjct: 153 GEPGTPGNPGPPGPPGPPGPPGLGGNFAAQMAGGFDEKAGGAQLGVMQGPMGPMGPRGPP 212 Query: 217 GCLPTAAAAAADALWRSRRAPLPPTEFLSPRRTRPRKHPERTRRPAQRLESGCRGHC-SR 275 G A A + P P E PR P +P E+G G R Sbjct: 213 G------PAGAPGPQGFQGNPGEPGEPGVSGPMGPRGPPGPPGKPGDDGEAGKPGKAGER 266 Query: 276 GAPALAPPKLSPPFPCLAQSASRAAGARRALSASRGRRGLLG-SGSLALP----LPGCRE 330 G P + P P L + L ++G G G G P PG Sbjct: 267 GPPGPQGARGFPGTPGL--PGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMG 324 Query: 331 PR-----QRLHGSDGAAGAR 345 PR + G GAAGAR Sbjct: 325 PRGLPGERGRTGPAGAAGAR 344 >gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Homo sapiens] Length = 1418 Score = 49.7 bits (117), Expect = 4e-06 Identities = 87/334 (26%), Positives = 110/334 (32%), Gaps = 50/334 (14%) Query: 26 PTPLRPAKGKTICTRFGDKRSSGQAGNKSERELQARTPAPPRERGESSSPRGPTLRGRAK 85 P P PA + GDK G G + R+ + TP P G P P L G Sbjct: 53 PGPQGPAGEQGPRGDRGDKGEKGAPGPRG-RDGEPGTPGNPGPPGPPGPPGPPGLGGNFA 111 Query: 86 TTRGRSQGAGATETSAGNSAATAAPHPTPASYPQGTISPPQLPAPRPKRFGGKQRPLWRI 145 +Q AG + AG + P P+G P P P+ Sbjct: 112 -----AQMAGGFDEKAGGAQLGVMQGPMGPMGPRGPPGPAGAPGPQ-------------- 152 Query: 146 RGWETTVARLPEPRV-GKLG-KGPPPRPAPPGTRCCPGARAAQLLREAAAAAQGLRAPAA 203 G++ EP V G +G +GPP P PG G + A +G P Sbjct: 153 -GFQGNPGEPGEPGVSGPMGPRGPPGPPGKPGDDGEAG-------KPGKAGERGPPGPQG 204 Query: 204 RLPEPTRRAPGRPGCLPTAAAAAADALWRSRRAPL------PPTEFLSPRRTRPRKHPER 257 P PG PG D AP P E SP PR P Sbjct: 205 ARGFPG--TPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGE 262 Query: 258 TRRPAQRLESGCRGHCSRGAPALAP----PKLSPPFPCLAQSASRAAG--ARRALSASRG 311 R +G RG+ + PA P P P FP A A AG R ++G Sbjct: 263 RGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPG-APGAKGEAGPTGARGPEGAQG 321 Query: 312 RRGLLGSGSLALPLPGCREPRQRLHGSDGAAGAR 345 RG G+ P P G+DG GA+ Sbjct: 322 PRGEPGTPGSPGPAGASGNP-----GTDGIPGAK 350 Score = 39.3 bits (90), Expect = 0.005 Identities = 84/327 (25%), Positives = 103/327 (31%), Gaps = 81/327 (24%) Query: 42 GDKRSSGQAGNKSERELQARTPAPPRERGE--------SSSPRGPT----LRGRAKTTRG 89 G + SG G E LQ PP E+GE + P GP RG Sbjct: 861 GARGDSGPPGRAGEPGLQGPA-GPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQ 919 Query: 90 RSQ-GAGATETSAGNSAATAAPHPTPASYPQGTISPPQLPAPRPKRFGGKQRPLWRIRGW 148 R + G +G AP + P G + PP L P Sbjct: 920 RGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGP------------------ 961 Query: 149 ETTVARLPEPRVGKLGKGPPPRPAPPGTRCCPGARAAQLLREAAAAAQGLRAPAARLPEP 208 G P R PG PG R+ AA +G R + P Sbjct: 962 ----------------AGEPGREGSPGADGPPG-------RDGAAGVKGDRGETGAVGAP 998 Query: 209 TRRAPGRPGCLPTAAAAA--ADALWRSRRAPLPPTEFLSPRRTR----PRKHPERTRRPA 262 APG PG A D + P+ P+ R + PR P Sbjct: 999 --GAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPG 1056 Query: 263 QRLESGCRGHCS-RGAPALAPPKLSPPFPCLAQSASRAAGARRALSASRGRRGLLG---- 317 +R G RG +G P PP P Q AS AG S RG G +G Sbjct: 1057 ERGLKGHRGFTGLQGLP-------GPPGPSGDQGASGPAGP----SGPRGPPGPVGPSGK 1105 Query: 318 SGSLALPLP-GCREPRQRLHGSDGAAG 343 G+ +P P G PR R G G AG Sbjct: 1106 DGANGIPGPIGPPGPRGR-SGETGPAG 1131 Score = 33.9 bits (76), Expect = 0.22 Identities = 81/324 (25%), Positives = 101/324 (31%), Gaps = 51/324 (15%) Query: 42 GDKRSSGQAGNKSERELQARTPAPPRERGESSSPRGPTLRGRAKTTRGRS--QGAGATET 99 GD +G+ G ER PP +G P P L G K RG GA Sbjct: 183 GDDGEAGKPGKAGER-------GPPGPQGARGFPGTPGLPG-VKGHRGYPGLDGAKGEAG 234 Query: 100 SAGNSAATAAPHPTPASYPQGTISPPQLPAPRPKRFGGKQRPLWRIRGWETTVARLPEPR 159 + G + +P + P G P LP R + T A R Sbjct: 235 APGVKGESGSPGENGSPGPMG---PRGLPGERGR----------------TGPAGAAGAR 275 Query: 160 VGKLGKGPPPRPAPPGTRCCPGARAAQLLREAAAAAQGLRAP-AARLPEPTRRAPGRPGC 218 GP P P G PG A + A G R P A+ P PG PG Sbjct: 276 GNDGQPGPAGPPGPVGPAGGPGFPGAPGAK-GEAGPTGARGPEGAQGPRGEPGTPGSPGP 334 Query: 219 LPTAAAAAADALWRSRRAPLPPTEFLSPRRTRPR--KHPERTRRP----AQRLESGCRGH 272 + D + ++ + P +P PR P+ P Q E G G Sbjct: 335 AGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGF 394 Query: 273 CSRGAPALAPPKLSP---PFPCLAQSASRAAGARRALS--------ASRGRRGLLGSGSL 321 P P P P P + A G + + G RG G L Sbjct: 395 KGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGL 454 Query: 322 ALP--LPGCREPRQRLHGSDGAAG 343 A P PG R P L G GA G Sbjct: 455 AGPKGAPGERGP-SGLAGPKGANG 477 Score = 33.9 bits (76), Expect = 0.22 Identities = 86/335 (25%), Positives = 103/335 (30%), Gaps = 71/335 (21%) Query: 66 PRERGESSSPRGPTLRGR-AKTTRGRSQGAGATETSAGNSAATAAPHPT-------PASY 117 P + GE P P LRG K + G AG AP P+ P Sbjct: 545 PGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGP 604 Query: 118 P-----------QGTISPPQLPAPRPKR-FGGKQ-----RPLWRIRGWETTVARLPEPRV 160 P G P L PR +R F G++ + L RG T P+ Sbjct: 605 PGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGT-DGPKG 663 Query: 161 GKLGKGPPPRPAPPGTRCCPGARAAQLLR--------------EAAAAAQGLRAPAARLP 206 GPP PPG + PG R A + E A G R + Sbjct: 664 ASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIG 723 Query: 207 EP-------TRRAPGRPGCLPTAAAAAADALWRSRRAPLPPTEFLSPRRTRPRKHPERTR 259 P + G PG +A A A R P P F P P Sbjct: 724 PPGPAGANGEKGEVGPPGPAGSAGARGAPG-ERGETGPPGPAGFAGP--------PGADG 774 Query: 260 RPAQRLESGCRGH-CSRGAPALAPPKLSPPFPCLAQSASRAAGARRA--------LSASR 310 +P + E G G GAP P P P + GAR A + Sbjct: 775 QPGAKGEQGEAGQKGDAGAPGPQGPS-GAPGPQGPTGVTGPKGARGAQGPPGATGFPGAA 833 Query: 311 GRRGLLGSGSLALPLPGCREPRQRLHGSDGAAGAR 345 GR G GS P PG P G DG GAR Sbjct: 834 GRVGPPGSNGNPGP-PGPPGP----SGKDGPKGAR 863 Score = 32.3 bits (72), Expect = 0.64 Identities = 41/159 (25%), Positives = 56/159 (35%), Gaps = 20/159 (12%) Query: 25 SPTPLRPAKGKTICTRFGDKRSSGQAGNKSERELQARTPAPPR-ERGESSSPRGPTLRGR 83 SP P P + G + G +G R +Q P PR ++GE+ P L+G Sbjct: 1006 SPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQG--PQGPRGDKGEAGEPGERGLKGH 1063 Query: 84 AKTTRGRSQGAGATETSAGNSAATAAPHPTPASYPQGTISPPQLPAPRPKRFGGKQRPLW 143 T QG +G+ A+ P+ P G + P G P+ Sbjct: 1064 RGFTG--LQGLPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGAN-----GIPGPIG 1116 Query: 144 RIRGWETTVARLPEPRVGKLGK-GPPPRPAPPGTRCCPG 181 P R G+ G GPP P PPG PG Sbjct: 1117 PPG---------PRGRSGETGPAGPPGNPGPPGPPGPPG 1146 >gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] Length = 538 Score = 49.7 bits (117), Expect = 4e-06 Identities = 67/229 (29%), Positives = 77/229 (33%), Gaps = 59/229 (25%) Query: 104 SAATAAPHPTPASYPQGTISPPQLPAPRPKRFGGKQRPLWRIRGWETTVARLPEPRVGKL 163 +AA AAP PTPA PP PAP AR P Sbjct: 121 AAAAAAPPPTPA--------PPPPPAPVA----------------AAAPARAPRAAAAAA 156 Query: 164 GKGPPPRPAPPGTRCCPGARAAQLLREAAAAAQGLRAPAARLPEPTRRAPGRPGCLPTAA 223 P P PA PG R RAA L A A PA P RRAP P A Sbjct: 157 TAPPSPGPAQPGPR---AQRAAPLAAPPPAPA---APPAVAPPAGPRRAP------PPAV 204 Query: 224 AAAADALWRSRRAPLPPTEFLSPRRTRPRKHPERTRRPAQRLESGCRGHCSRGAPALAPP 283 AA R PLPP +P P++ + P + + G R A P Sbjct: 205 AA--------REPPLPPP-------PQPPAPPQQQQPPPPQPQPPPEGGAVRAGGAARPV 249 Query: 284 KLSPPFPCLAQSA--------SRAAGARRALSASRGRRGLLGSGSLALP 324 L L S R G +A+RGR G+LALP Sbjct: 250 SLREVVRYLGGSGGAGGRLTRGRVQGLLEEEAAARGRLERTRLGALALP 298 Score = 45.8 bits (107), Expect = 6e-05 Identities = 58/211 (27%), Positives = 77/211 (36%), Gaps = 27/211 (12%) Query: 63 PAPPRERGESSSPRGPTLRGRAKTTRGRSQGAGATETSAGNSAATAAPHPTPASYPQGTI 122 P PP +++P A T S G A +A AAP P PA+ P + Sbjct: 133 PPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPP--AV 190 Query: 123 SPPQLPAPRPKRFGGKQRPLWRIRGWETTVARLPEPRV-GKLGKGPPPRPAPP---GTRC 178 +PP G ++ P + E + P+P + + PPP+P PP G Sbjct: 191 APPA---------GPRRAPPPAVAAREPPLPPPPQPPAPPQQQQPPPPQPQPPPEGGAVR 241 Query: 179 CPGARAAQLLREAAAAAQGLRAPAARLPEPTRRAPGRPGCLPTAAAAAADALWRSRRAPL 238 GA LRE G RL GR L AAA L R+R L Sbjct: 242 AGGAARPVSLREVVRYLGGSGGAGGRLTR------GRVQGLLEEEAAARGRLERTRLGAL 295 Query: 239 PPTEFLSPRRTRP-RKHPERTRRPAQRLESG 268 PR RP R P + RP++ G Sbjct: 296 -----ALPRGDRPGRAPPAASARPSRSKRGG 321 Score = 43.1 bits (100), Expect = 4e-04 Identities = 84/289 (29%), Positives = 103/289 (35%), Gaps = 71/289 (24%) Query: 94 AGATETSAGNSAATAAPH------PTPASYPQGTISPP---------QLPAPRPKRFGGK 138 A A T+A S++ A+PH T S P + P P+R + Sbjct: 13 AAAATTAAAASSSAASPHYQEWILDTIDSLRSRKARPDLERICRMVRRRHGPEPERTRAE 72 Query: 139 ------QRPLWRIRGWETTVARLPEPRVGKLGKGPPPRPAPPGTRCCPGARAAQLLREAA 192 QR + R+ ++ +++ RV +G P PAPP R GA AA AA Sbjct: 73 LEKLIQQRAVLRV-SYKGSISYRNAARVQPPRRGATP-PAPP--RAPRGAPAAA----AA 124 Query: 193 AAAQGLRAPAARLPEPTRRAPGRPGCLPTAAAAAADA----------LWRSRRAPL--PP 240 AA AP P P A P P AAAAAA A R APL PP Sbjct: 125 AAPPPTPAPP---PPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPP 181 Query: 241 TEFLSPRRTRPRKHPERTRRPAQRLESGCRGHCSRGAPALAPPKLSP------------P 288 +P P P R PA + P L PP P P Sbjct: 182 PAPAAPPAVAPPAGPRRAPPPA----------VAAREPPLPPPPQPPAPPQQQQPPPPQP 231 Query: 289 FPCLAQSASRAAGARRALSASRGRRGLLGSGSLALPLPGCREPRQRLHG 337 P A RA GA R +S R L GSG G R R R+ G Sbjct: 232 QPPPEGGAVRAGGAARPVSLREVVRYLGGSGG-----AGGRLTRGRVQG 275 >gi|239740948 PREDICTED: hypothetical protein LOC644246 [Homo sapiens] Length = 328 Score = 49.3 bits (116), Expect = 5e-06 Identities = 79/278 (28%), Positives = 96/278 (34%), Gaps = 63/278 (22%) Query: 62 TPAPPRERGESSSPRG--------PTLRGRAKTTRGRSQGAGATETSAGNSAATAAPHPT 113 TP+P ++G P P L A T R +G G E G Sbjct: 66 TPSPDPQQGSPERPFKVPGVFSTLPCL-STALTFRAGGRGRGGGEGGGGERLLFLLFRAL 124 Query: 114 --PASYPQGTISPPQLPAPRPKRFGGKQRPLWRIRGWETTVARLPEPRVGK---LGKGPP 168 P S P G P P+P R GG+ G E+ A P PR K L P Sbjct: 125 SRPCSAPTG---PEHGWRPQPGREGGRA-------GAESETA--PPPRTNKHRRLQPEPA 172 Query: 169 PRPAPPGTRCCPGARAAQLLREAAAAAQGLRAPAARLPEPTRR---APGRPGCLPTAAAA 225 PRP PP PG+ L+ P P P RR A R LP A A Sbjct: 173 PRPPPPAASFQPGS--------------ALQPP----PAPPRRDDSASLRCSVLPPARRA 214 Query: 226 AADAL--WRSRRAPLPP----------TEFLSPRRTRPRKHPERTRRPAQRLESGCRGHC 273 A AL WR LPP +E RR + + +R RR R G G Sbjct: 215 VAAALGKWRPSSFSLPPFNLKRRENGASERAGERRGQGEEGQQRLRRLRLRRPRGPPGGA 274 Query: 274 SRGAPALAPPKLSPPFPCLAQSASRAAGARRALSASRG 311 + A +AP + C S GAR L + G Sbjct: 275 AAAASVMAPRRSR----CFCTSICGGRGARPQLPRTCG 308 >gi|182507165 thymus expressed gene 3-like [Homo sapiens] Length = 629 Score = 48.5 bits (114), Expect = 9e-06 Identities = 72/259 (27%), Positives = 95/259 (36%), Gaps = 54/259 (20%) Query: 61 RTPAP---PRERGESSSPRGPTLRG--RAKTTRGRSQGAGATETSAGNSAA------TAA 109 R+P P P + G L G A R R +GAG TS G + + Sbjct: 227 RSPRPCGRPPTDSPDAGGAGRPLDGYISALLRRRRRRGAGQPRTSPGGADGGPRRQNSVR 286 Query: 110 PHPTPASYPQGTISPPQLPAPRPKRFGGKQR-PLWRIRGWETT--VARLPEPRVGKLGKG 166 P AS G+ P + P+ +R GG P R W ++ PEP Sbjct: 287 QRPPDASPSPGSARPAREPSL--ERVGGHPTSPAALSRAWASSWESEAAPEPAA------ 338 Query: 167 PPPRPAPPGTRCCPGARAAQLLREAAAAAQGLRAPAARLPEP--TR-------------R 211 PP P+PP + AQ + A AA +GL AAR P TR R Sbjct: 339 PPAAPSPPDSPAEGRLVKAQYIPGAQAATRGLPGRAARRKPPPLTRGRSVEQSPPRERPR 398 Query: 212 APGRPGCLPTAAA--------------AAADALWRSRRAPLPPTEFLSPRRTRPRKHPER 257 A GR G + A+ + L R+ P P ++ + R PR P R Sbjct: 399 AAGRRGRMAEASGRRGSPRARKASRSQSETSLLGRASAVPSGPPKYPTAEREEPR--PPR 456 Query: 258 TRR-PAQRLESGCRGHCSR 275 RR PA L + G C R Sbjct: 457 PRRGPAPTLAAQAAGSCRR 475 Score = 45.4 bits (106), Expect = 7e-05 Identities = 97/375 (25%), Positives = 128/375 (34%), Gaps = 82/375 (21%) Query: 12 LEEHPSRKLGRYRSPTPLR--PAKGKTIC--TRFGDKRSSGQAGNKSERELQARTPAPPR 67 LE+ R G Y P+ + T C + F S G+ G R + A P+ Sbjct: 107 LEQESGRSSGFYEDPSSTGGPDSPPSTFCGDSGFSGSSSYGRLGPSEPRGIYASER--PK 164 Query: 68 ERGESSSPRGPTLRGRAKTTRGRSQ-------GAGATETSAGNSAATAAPHPTPASYPQG 120 G++S + RA R S AG S+ A A P TP+ Sbjct: 165 SLGDASPSAPEVVGARAAVPRSFSAPYPTAGGSAGPEACSSAERRARAGPFLTPSPLHAV 224 Query: 121 TISPPQLPAPRPKR----FGGKQRPLWRIRGWETTVAR------LPEPRVGKLGKGPPPR 170 + P+ P RP GG RPL G+ + + R +PR G PR Sbjct: 225 AMRSPR-PCGRPPTDSPDAGGAGRPL---DGYISALLRRRRRRGAGQPRTSPGGADGGPR 280 Query: 171 ------PAPPGTRCCPG----ARAAQLLR-------------------EAAAAAQGLRAP 201 PP PG AR L R E+ AA + P Sbjct: 281 RQNSVRQRPPDASPSPGSARPAREPSLERVGGHPTSPAALSRAWASSWESEAAPEPAAPP 340 Query: 202 AARLPEPTRRAPGR---PGCLPTAAAAAADALWRS-RRAPLPPTEFLSPRRTRPRKHPER 257 AA P P A GR +P A AA R+ RR P P T S ++ PR+ P Sbjct: 341 AAPSP-PDSPAEGRLVKAQYIPGAQAATRGLPGRAARRKPPPLTRGRSVEQSPPRERPRA 399 Query: 258 TRRPAQRLESGCRGHCSRGAPALAPPKLSPPFPCLAQSASRAAGARRALSASRGRRGLLG 317 R + E+ R RG+P A+ ASR+ L GR + Sbjct: 400 AGRRGRMAEASGR----RGSPR-------------ARKASRSQSETSLL----GRASAVP 438 Query: 318 SGSLALPLPGCREPR 332 SG P EPR Sbjct: 439 SGPPKYPTAEREEPR 453 Score = 42.7 bits (99), Expect = 5e-04 Identities = 58/221 (26%), Positives = 78/221 (35%), Gaps = 40/221 (18%) Query: 28 PLRPAKGKTICTRFGDKRSSGQAGNKSERELQARTPAPPRERGESSSPRGPTLRGRAKTT 87 P PA+G+ + ++ QA + AR PP RG S P R RA Sbjct: 346 PDSPAEGRLVKAQY---IPGAQAATRGLPGRAARRKPPPLTRGRSVEQSPPRERPRAAGR 402 Query: 88 RGRSQGAGATETSAGNSAATAAPHPTP-----ASYPQGTISPPQLPAPRPKRFGGKQRPL 142 RGR A S A+ + T ++ P G PP+ P Sbjct: 403 RGRMAEASGRRGSPRARKASRSQSETSLLGRASAVPSG---PPKYPT------------- 446 Query: 143 WRIRGWETTVARLPEPRVGKLGKGPPPRPAPPGTRCCPGARAAQLLREAAAAAQGLRAPA 202 A EPR + +GP P A C R+ + A RAPA Sbjct: 447 ----------AEREEPRPPRPRRGPAPTLAAQAAGSCRRWRSTAEIDAADGRRVRPRAPA 496 Query: 203 ARL--PEPTRRAPGRP---GCLPTAAAAAADALW-RSRRAP 237 AR+ P P+ AP R GC + + +A L RR P Sbjct: 497 ARVPGPGPSPSAPQRRLLYGCAGSDSECSAGRLGPLGRRGP 537 >gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo sapiens] Length = 384 Score = 48.1 bits (113), Expect = 1e-05 Identities = 79/275 (28%), Positives = 102/275 (37%), Gaps = 51/275 (18%) Query: 82 GRAKTTRGRS----QGAGATETSAGNSAATAAPHPTPASYPQGTISPPQLPAPRPKRFGG 137 G + TR R +G + E++AG + APHP + P + P PR + G Sbjct: 42 GTCRLTRSRKSRLERGTFSPESAAGTEVS-GAPHPDSRTRPAA-----RPPHPRTRSPPG 95 Query: 138 KQRPLWRIRGWETTVARLPEPRVGKLGKGPPPRPAPPGTR-CCPGARAAQLLREAAAAAQ 196 + G TT + +P PR + G RPA PG R C ARA+ A AA Q Sbjct: 96 RS-------GSGTTFSAVP-PRPSQHQSGSRLRPAAPGPRPGCSSARAS----PAPAAPQ 143 Query: 197 GLRAPAARLPEPTRRAPGRPGCLPTAAAAAADALWR--SRRAPLPPTEFLSPRRTRPRKH 254 AA P R A G G P + +D + SR PP R PR+ Sbjct: 144 -----AAARTAPGRAASGGSG--PGSRGQGSDQVGARPSRAGGQPPPLTCRRCRAAPRRS 196 Query: 255 PERTRRPAQRLES---------GCRGHCSRGAPALAPPKL-SPPFPCLAQSASRAAGARR 304 RRP L+S C S G P A S F + G Sbjct: 197 ARPFRRPGLPLKSRPGSGTGARSCGTWGSGGGPGTAAASSPSADFSSDSPQPIIIFGGAL 256 Query: 305 ALSASRGRRGLLGSGSLALPLPGCR-----EPRQR 334 + GRR G G+ PGCR PR+R Sbjct: 257 RVRGCGGRRRSNGQGT----QPGCRLLSPAPPRRR 287 Score = 30.4 bits (67), Expect = 2.4 Identities = 80/309 (25%), Positives = 106/309 (34%), Gaps = 64/309 (20%) Query: 5 SGSDPQVLEEHPSRKLGRYRSPTPLRPAKGKTICTRFGDKRSSGQAGNKSERELQARTPA 64 S + P HP R RSP P R G T + + S Q+G++ L+ P Sbjct: 77 SRTRPAARPPHP-----RTRSP-PGRSGSGTTF-SAVPPRPSQHQSGSR----LRPAAPG 125 Query: 65 P-PRERGESSSPRGPTLRGRAKTTRGR---------SQGAGATETSAGNSAATAAPHPTP 114 P P +SP + A+T GR S+G G+ + A S A P P Sbjct: 126 PRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGARPSRAGGQPPPLT 185 Query: 115 A----SYPQGTISP---PQLP-APRP-KRFGGKQRPLWRIRGWETTVARLPEPRVGKLGK 165 + P+ + P P LP RP G + W G T A P Sbjct: 186 CRRCRAAPRRSARPFRRPGLPLKSRPGSGTGARSCGTWGSGGGPGTAA-ASSPSADFSSD 244 Query: 166 GPPPRPAPPG---TRCCPGARAAQLLREAAAAAQGLRAPAARL--PEPTRRAPGRPGCLP 220 P P G R C G R + QG + P RL P P RR +P L Sbjct: 245 SPQPIIIFGGALRVRGCGGRRRSN--------GQGTQ-PGCRLLSPAPPRRRYRKPLTLS 295 Query: 221 TAAAAAADALWRSRRAPLPPTEFLSPRRTRPRKHPERTRRPAQRLESGCRGHCSRGAPAL 280 ++ P ++PRR PR P R +G R H AP Sbjct: 296 FGGGVSS-----------PTHPVVAPRRHFPRSVP--------RFPAGFRTHSLGTAPKP 336 Query: 281 APPKLSPPF 289 K S P+ Sbjct: 337 KCWKHSQPW 345 >gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo sapiens] Length = 384 Score = 48.1 bits (113), Expect = 1e-05 Identities = 79/275 (28%), Positives = 102/275 (37%), Gaps = 51/275 (18%) Query: 82 GRAKTTRGRS----QGAGATETSAGNSAATAAPHPTPASYPQGTISPPQLPAPRPKRFGG 137 G + TR R +G + E++AG + APHP + P + P PR + G Sbjct: 42 GTCRLTRSRKSRLERGTFSPESAAGTEVS-GAPHPDSRTRPAA-----RPPHPRTRSPPG 95 Query: 138 KQRPLWRIRGWETTVARLPEPRVGKLGKGPPPRPAPPGTR-CCPGARAAQLLREAAAAAQ 196 + G TT + +P PR + G RPA PG R C ARA+ A AA Q Sbjct: 96 RS-------GSGTTFSAVP-PRPSQHQSGSRLRPAAPGPRPGCSSARAS----PAPAAPQ 143 Query: 197 GLRAPAARLPEPTRRAPGRPGCLPTAAAAAADALWR--SRRAPLPPTEFLSPRRTRPRKH 254 AA P R A G G P + +D + SR PP R PR+ Sbjct: 144 -----AAARTAPGRAASGGSG--PGSRGQGSDQVGARPSRAGGQPPPLTCRRCRAAPRRS 196 Query: 255 PERTRRPAQRLES---------GCRGHCSRGAPALAPPKL-SPPFPCLAQSASRAAGARR 304 RRP L+S C S G P A S F + G Sbjct: 197 ARPFRRPGLPLKSRPGSGTGARSCGTWGSGGGPGTAAASSPSADFSSDSPQPIIIFGGAL 256 Query: 305 ALSASRGRRGLLGSGSLALPLPGCR-----EPRQR 334 + GRR G G+ PGCR PR+R Sbjct: 257 RVRGCGGRRRSNGQGT----QPGCRLLSPAPPRRR 287 Score = 30.4 bits (67), Expect = 2.4 Identities = 80/309 (25%), Positives = 106/309 (34%), Gaps = 64/309 (20%) Query: 5 SGSDPQVLEEHPSRKLGRYRSPTPLRPAKGKTICTRFGDKRSSGQAGNKSERELQARTPA 64 S + P HP R RSP P R G T + + S Q+G++ L+ P Sbjct: 77 SRTRPAARPPHP-----RTRSP-PGRSGSGTTF-SAVPPRPSQHQSGSR----LRPAAPG 125 Query: 65 P-PRERGESSSPRGPTLRGRAKTTRGR---------SQGAGATETSAGNSAATAAPHPTP 114 P P +SP + A+T GR S+G G+ + A S A P P Sbjct: 126 PRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGARPSRAGGQPPPLT 185 Query: 115 A----SYPQGTISP---PQLP-APRP-KRFGGKQRPLWRIRGWETTVARLPEPRVGKLGK 165 + P+ + P P LP RP G + W G T A P Sbjct: 186 CRRCRAAPRRSARPFRRPGLPLKSRPGSGTGARSCGTWGSGGGPGTAA-ASSPSADFSSD 244 Query: 166 GPPPRPAPPG---TRCCPGARAAQLLREAAAAAQGLRAPAARL--PEPTRRAPGRPGCLP 220 P P G R C G R + QG + P RL P P RR +P L Sbjct: 245 SPQPIIIFGGALRVRGCGGRRRSN--------GQGTQ-PGCRLLSPAPPRRRYRKPLTLS 295 Query: 221 TAAAAAADALWRSRRAPLPPTEFLSPRRTRPRKHPERTRRPAQRLESGCRGHCSRGAPAL 280 ++ P ++PRR PR P R +G R H AP Sbjct: 296 FGGGVSS-----------PTHPVVAPRRHFPRSVP--------RFPAGFRTHSLGTAPKP 336 Query: 281 APPKLSPPF 289 K S P+ Sbjct: 337 KCWKHSQPW 345 >gi|239508962 PREDICTED: hypothetical protein [Homo sapiens] Length = 384 Score = 48.1 bits (113), Expect = 1e-05 Identities = 79/275 (28%), Positives = 102/275 (37%), Gaps = 51/275 (18%) Query: 82 GRAKTTRGRS----QGAGATETSAGNSAATAAPHPTPASYPQGTISPPQLPAPRPKRFGG 137 G + TR R +G + E++AG + APHP + P + P PR + G Sbjct: 42 GTCRLTRSRKSRLERGTFSPESAAGTEVS-GAPHPDSRTRPAA-----RPPHPRTRSPPG 95 Query: 138 KQRPLWRIRGWETTVARLPEPRVGKLGKGPPPRPAPPGTR-CCPGARAAQLLREAAAAAQ 196 + G TT + +P PR + G RPA PG R C ARA+ A AA Q Sbjct: 96 RS-------GSGTTFSAVP-PRPSQHQSGSRLRPAAPGPRPGCSSARAS----PAPAAPQ 143 Query: 197 GLRAPAARLPEPTRRAPGRPGCLPTAAAAAADALWR--SRRAPLPPTEFLSPRRTRPRKH 254 AA P R A G G P + +D + SR PP R PR+ Sbjct: 144 -----AAARTAPGRAASGGSG--PGSRGQGSDQVGARPSRAGGQPPPLTCRRCRAAPRRS 196 Query: 255 PERTRRPAQRLES---------GCRGHCSRGAPALAPPKL-SPPFPCLAQSASRAAGARR 304 RRP L+S C S G P A S F + G Sbjct: 197 ARPFRRPGLPLKSRPGSGTGARSCGTWGSGGGPGTAAASSPSADFSSDSPQPIIIFGGAL 256 Query: 305 ALSASRGRRGLLGSGSLALPLPGCR-----EPRQR 334 + GRR G G+ PGCR PR+R Sbjct: 257 RVRGCGGRRRSNGQGT----QPGCRLLSPAPPRRR 287 Score = 30.4 bits (67), Expect = 2.4 Identities = 80/309 (25%), Positives = 106/309 (34%), Gaps = 64/309 (20%) Query: 5 SGSDPQVLEEHPSRKLGRYRSPTPLRPAKGKTICTRFGDKRSSGQAGNKSERELQARTPA 64 S + P HP R RSP P R G T + + S Q+G++ L+ P Sbjct: 77 SRTRPAARPPHP-----RTRSP-PGRSGSGTTF-SAVPPRPSQHQSGSR----LRPAAPG 125 Query: 65 P-PRERGESSSPRGPTLRGRAKTTRGR---------SQGAGATETSAGNSAATAAPHPTP 114 P P +SP + A+T GR S+G G+ + A S A P P Sbjct: 126 PRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGARPSRAGGQPPPLT 185 Query: 115 A----SYPQGTISP---PQLP-APRP-KRFGGKQRPLWRIRGWETTVARLPEPRVGKLGK 165 + P+ + P P LP RP G + W G T A P Sbjct: 186 CRRCRAAPRRSARPFRRPGLPLKSRPGSGTGARSCGTWGSGGGPGTAA-ASSPSADFSSD 244 Query: 166 GPPPRPAPPG---TRCCPGARAAQLLREAAAAAQGLRAPAARL--PEPTRRAPGRPGCLP 220 P P G R C G R + QG + P RL P P RR +P L Sbjct: 245 SPQPIIIFGGALRVRGCGGRRRSN--------GQGTQ-PGCRLLSPAPPRRRYRKPLTLS 295 Query: 221 TAAAAAADALWRSRRAPLPPTEFLSPRRTRPRKHPERTRRPAQRLESGCRGHCSRGAPAL 280 ++ P ++PRR PR P R +G R H AP Sbjct: 296 FGGGVSS-----------PTHPVVAPRRHFPRSVP--------RFPAGFRTHSLGTAPKP 336 Query: 281 APPKLSPPF 289 K S P+ Sbjct: 337 KCWKHSQPW 345 >gi|188536004 zinc finger protein 469 [Homo sapiens] Length = 3925 Score = 47.8 bits (112), Expect = 1e-05 Identities = 57/211 (27%), Positives = 78/211 (36%), Gaps = 30/211 (14%) Query: 61 RTPAPPRERGE------SSSPRGPTLRGRAKTTRGRSQGAGATETSAGNSAATAAPHPTP 114 R PP G+ +SSP P+ T GA E + G + A P P Sbjct: 7 RGAPPPTMTGDLQPRQVASSPGHPSQPPLEDNTPATRTTKGARE-AGGQAQAMELPEAQP 65 Query: 115 ASYPQGTISPPQL----PAPRPKRFGGKQRPLWRIRGWETTVARLPEPRVGKLGKGPPPR 170 G + PP L P+ P + G Q P R + + P G+ +G PP+ Sbjct: 66 RQARDGELKPPSLRGQAPSSTPGKRGSPQTPPGR------SPLQAPSRLAGR-AEGSPPQ 118 Query: 171 PAPPGTRCCPGARAAQLLREAAAAAQGLRAPAARLPE------PTRRAPGRPGCLPTAAA 224 R G +++ + + AA+LPE P AP RPG T A Sbjct: 119 ------RYILGIASSRTKPTLDETPENPQLEAAQLPEVDTPQGPGTGAPLRPGLPRTEAQ 172 Query: 225 AAADALWRSRRAPLPPTEFLSPRRTRPRKHP 255 AA+ L R PP+ F S T P P Sbjct: 173 PAAEELGFHRCFQEPPSSFTSTNYTSPSATP 203 Score = 41.2 bits (95), Expect = 0.001 Identities = 59/222 (26%), Positives = 74/222 (33%), Gaps = 91/222 (40%) Query: 71 ESSSPRGPTLRGRAKTTRGRSQGAGATETSAGNSAATAAPHPTPASYPQGTISPPQLPAP 130 E S PRGP+ ++ AG + + AP P PA+ P PQ P P Sbjct: 872 EPSGPRGPS-------------SGHPLKSKAGVTPESKAPPPLPAATPD-----PQTPRP 913 Query: 131 RPKRFGGKQRPLWRIRGWETTVARLP----EPRVGK------------------------ 162 + + RP R G T A P + R GK Sbjct: 914 GDRGCPARGRPKTRSLGLAPTEADAPSQGRQQRRGKQLKLFRKDLDSGGAAEGSGSGGGG 973 Query: 163 ------------LGKGPPPRPAPPGTRCCPGARAAQLLREAAAAAQGLRAPAARLPEPTR 210 LG+ PPPRP P T+ PG+RA R AAA LPE TR Sbjct: 974 RASGLRPRRNDGLGERPPPRPRRPRTQ-APGSRADPAPRVPRAAA---------LPEETR 1023 Query: 211 RAPGRPGCLPTAAAAAADALWRSRRAPLPPTEFLSPRRTRPR 252 SRR LPP + PR+ + R Sbjct: 1024 ---------------------SSRRRRLPPRK--DPRKRKAR 1042 Score = 37.0 bits (84), Expect = 0.026 Identities = 44/160 (27%), Positives = 58/160 (36%), Gaps = 19/160 (11%) Query: 65 PPRERGESSSPRGPTLRGRAKTTRGRSQGAGATETSAGN-SAATAAPHPTPASYPQGTIS 123 PP + S RGP + G++ A +TS G AAP P PA PQ Sbjct: 384 PPSAQDGLGSTRGPPSSLPQRHFPGQAYRASGVDTSPGPPDTELAAPGPPPARLPQ-LWD 442 Query: 124 PPQLPAPRPKR----------FGGKQRPLWRIRGWETTVARLPEPRVGKLGKGPPPRPAP 173 P P P P F G+ P R+ ++ A LP P+V P RP+P Sbjct: 443 PTAAPYPTPPGGPLAATRSMFFNGQPSPGQRLCLPQS--APLPWPQV-----LPTARPSP 495 Query: 174 PGTRCCPGARAAQLLREAAAAAQGLRAPAARLPEPTRRAP 213 G E +QG A + P P + P Sbjct: 496 HGMEMLSRLPFPAGGPEWQGGSQGALGTAGKTPGPREKLP 535 Score = 35.4 bits (80), Expect = 0.076 Identities = 63/249 (25%), Positives = 85/249 (34%), Gaps = 39/249 (15%) Query: 31 PAKGKTICTRF--GDKRSSGQAGNKSERELQARTPA-----PPRERGESSSPRGPTLRGR 83 P + T TR G + + GQA E Q R PP RG++ S P RG Sbjct: 34 PLEDNTPATRTTKGAREAGGQAQAMELPEAQPRQARDGELKPPSLRGQAPSST-PGKRGS 92 Query: 84 AKTTRGRSQGAGATETSAGNSAATAAPHPTPASYPQGTISPPQLPAPRPKRFGGKQRPLW 143 +T GRS A + A A P Y G S +P + P Sbjct: 93 PQTPPGRSP------LQAPSRLAGRAEGSPPQRYILGIASS----RTKPTLDETPENP-- 140 Query: 144 RIRGWETTVARLPEPRVGK-LGKGPPPRPAPPGTRCCPGARAAQLLR------------E 190 + A+LPE + G G P RP P T P A R Sbjct: 141 -----QLEAAQLPEVDTPQGPGTGAPLRPGLPRTEAQPAAEELGFHRCFQEPPSSFTSTN 195 Query: 191 AAAAAQGLRAPAARLPEPTRRAPGRPGCLPTAAAAAADALWRSRRAPLPPTEFLSPRRTR 250 + + R PA P+ +P +PG P A+ AD+ + P F P Sbjct: 196 YTSPSATPRPPAPGPPQSRGTSPLQPGSYPEYQASGADSWPPAAENSFPGANFGVP-PAE 254 Query: 251 PRKHPERTR 259 P P+ +R Sbjct: 255 PEPIPKGSR 263 Score = 32.7 bits (73), Expect = 0.49 Identities = 33/133 (24%), Positives = 54/133 (40%), Gaps = 25/133 (18%) Query: 63 PAPPRERGESSSPRGPTLRGRAKTTRGRSQGAGAT-ETSAGNSAATAAPHPTPASYPQGT 121 PA P+ + GP+ +G G G G+ + ++G + A P S+P + Sbjct: 3693 PATPKAKP------GPSSQGSGSPRPGTKTGGGSQPQPASGQLQSETATTPAKPSFPSRS 3746 Query: 122 ISPPQLPA-------PRPKRFGGKQRPLWRI----RGWETT---VARLPEP----RVGKL 163 +P +LPA + R G+Q P + +G +T ++P P VG Sbjct: 3747 PAPERLPARAQAKSCTKGPREAGEQGPHGSLGPKEKGESSTKRKKGQVPGPARSESVGSF 3806 Query: 164 GKGPPPRPAPPGT 176 G+ P PP T Sbjct: 3807 GRAPSAPDKPPRT 3819 >gi|148229134 ring finger and KH domain containing 2 [Homo sapiens] Length = 659 Score = 47.8 bits (112), Expect = 1e-05 Identities = 47/123 (38%), Positives = 52/123 (42%), Gaps = 21/123 (17%) Query: 101 AGNSAATAAPHPTPASYPQGTISPPQLPAPRPKRFGGKQRPLWRIRGWETTVARLPEPRV 160 +G+SAA A PA PQ PP P P P GG + + G L R+ Sbjct: 3 SGSSAALALA-AAPAPLPQPPPPPPPPPPPLPPPSGGPE-----LEG----DGLLLRERL 52 Query: 161 GKLGKGPPPRPAPPGTRCCPGARAAQLLREAAAAAQGLRAPAARLPEPTRRAPGRPGCLP 220 LG P PA PG A LR AAAAQG AA L R PGRPG P Sbjct: 53 AALGLDDPS-PAEPG---------APALRAPAAAAQGQARRAAELSPEERAPPGRPGA-P 101 Query: 221 TAA 223 AA Sbjct: 102 EAA 104 Score = 34.7 bits (78), Expect = 0.13 Identities = 27/82 (32%), Positives = 33/82 (40%), Gaps = 5/82 (6%) Query: 167 PPPRPAPPGTRCCPGARAAQLLREAAAAAQGLRAPAARLPEPTRRAPGRPGCLPTAAAAA 226 PPP P PP P + +L + + R A L +P+ PG P AAAA Sbjct: 21 PPPPPPPPPPPLPPPSGGPELEGDGLLLRE--RLAALGLDDPSPAEPGAPALRAPAAAAQ 78 Query: 227 ADALWRSRRAPLPPTEFLSPRR 248 A R A L P E P R Sbjct: 79 GQA---RRAAELSPEERAPPGR 97 >gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] Length = 904 Score = 47.8 bits (112), Expect = 1e-05 Identities = 70/280 (25%), Positives = 105/280 (37%), Gaps = 45/280 (16%) Query: 47 SGQAGNKSERELQARTPAP-PRERGESSSPRGPTLRGRA-KTTRGRSQGAGATETSAGNS 104 +G+ G + R +R+ +P PR+R + +SPRG R + TR R + A + Sbjct: 514 NGEVGRR-RRHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRT 572 Query: 105 AATAAPHPTPASYPQGTISPPQLPAPRPKRFGGK-QRPLWRIRGWETTVARLPEPRVGKL 163 PTP + PP+ +P P+R+ QR + A P P + Sbjct: 573 -------PTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRA 625 Query: 164 GKGPPPR-----PAPPGTRCCP---------------GARAAQLLREAAAAAQGLRAPAA 203 PPP+ PP R P G+ ++ REA + R Sbjct: 626 SPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKR---- 681 Query: 204 RLPEPTRRAPGRPGCLPTAAAAAADALWRSRRAPLPPTEFLSPRRTRPRKHPERTRRPAQ 263 P P RAP P A+ + R R++P P T + RR P++ ++ A Sbjct: 682 HSPSPRPRAPQTSSSPPPVRRGASSSPQR-RQSPSPSTRPI--RRVSRTPEPKKIKKAAS 738 Query: 264 ------RLESGCRGHCSRGAPALAPPKLSPPFPCLAQSAS 297 R S R PA P +PP P +QS S Sbjct: 739 PSPQSVRRVSSSRSVSGSPEPAAKKPP-APPSPVQSQSPS 777 Score = 45.4 bits (106), Expect = 7e-05 Identities = 65/270 (24%), Positives = 96/270 (35%), Gaps = 29/270 (10%) Query: 43 DKRSSGQAGNKSERELQARTPAPPRERGESSSPRGPTLRGRAKTTRGRSQGAGATETSAG 102 DK + +S RE + R+ +P R + S SPR + R + R S+ Sbjct: 150 DKDKRDKEEKESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSP-------- 201 Query: 103 NSAATAAPHPTPASYPQGTISPPQLPAPRPKRFGGKQRPLWRIRGWETTVARLPEPRVGK 162 T + P+PA P+ P+LP P K + P + + + ++P+P Sbjct: 202 -RHRTKSRSPSPA--PEKKEKTPELPEPSVK----VKEPSVQEATSTSDILKVPKPEPIP 254 Query: 163 LGKGPPPRPAPPGTRCCPGARAAQLLREAAAAAQGLRAPAARLPEPTRRAPGR---PGCL 219 K P P + R R + + R+P+ P R+ R P Sbjct: 255 EPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRR 314 Query: 220 PTAAAAAADALWRSRRAPLPPTEFLSPRRTRPRKHPERTRRPAQRLESGCRGHCSRG--- 276 P+ S R PP P R R + P R RR + SG S Sbjct: 315 PSPRRRP------SPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSR 368 Query: 277 APALAPPK--LSPPFPCLAQSASRAAGARR 304 +P PPK SPP S S + RR Sbjct: 369 SPPKKPPKRTSSPPRKTRRLSPSASPPRRR 398 Score = 31.6 bits (70), Expect = 1.1 Identities = 39/175 (22%), Positives = 58/175 (33%), Gaps = 22/175 (12%) Query: 16 PSRKLGRYRSPTPLRPAKGKTICTRFGDKRSSGQAGNKSERELQARTPAPPRERGESSSP 75 P R++ P K K G + ++S RE AR+P P + S P Sbjct: 631 PKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTRE--ARSPQPNKRHSPSPRP 688 Query: 76 RG--------PTLRGRAKTTRGRSQGAGATETSAGNSAA--------TAAPHPTPASYPQ 119 R P RG + + + R + +T S A+P P Sbjct: 689 RAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVS 748 Query: 120 GTISPPQLPAPRPKRFGGKQRPLWRIRGWETTVARLPEPRVGKLGKGPPPRPAPP 174 + S P P K+ P ++ + P V K K P P P+PP Sbjct: 749 SSRSVSGSPEPAAKKPPAPPSP---VQSQSPSTNWSPAVPV-KKAKSPTPSPSPP 799 >gi|239749199 PREDICTED: hypothetical protein XP_002346952 [Homo sapiens] Length = 209 Score = 47.4 bits (111), Expect = 2e-05 Identities = 63/197 (31%), Positives = 83/197 (42%), Gaps = 36/197 (18%) Query: 82 GRAKTTRGRS----QGAGATETSAGNSAATAAPHPTPASYPQGTISPPQLPAPRPKRFGG 137 G + TR R +G + E++AG + APHP + P + P PR + G Sbjct: 42 GTCRLTRSRKSRLERGTFSPESAAGTEVS-GAPHPDSRTRPAA-----RPPHPRTRSPPG 95 Query: 138 KQRPLWRIRGWETTVARLPEPRVGKLGKGPPPRPAPPGTR-CCPGARAAQLLREAAAAAQ 196 + G TT + +P PR + G RPA PG R C ARA+ A AA Q Sbjct: 96 RS-------GSGTTFSAVP-PRPSQHQSGSRLRPAAPGPRPGCSSARAS----PAPAAPQ 143 Query: 197 GLRAPAARLPEPTRRAPGRPGCLPTAAAAAADALWR--SRRAPLPPTEFLSPRRTRPRKH 254 AA P R A G G P + +D + SR PP L+ RR R Sbjct: 144 -----AAARTAPGRAASGGSG--PGSRGQGSDQVGARPSRAGGQPPP--LTCRRCRAA-- 192 Query: 255 PERTRRPAQRLESGCRG 271 P R+ RP +R CRG Sbjct: 193 PRRSARPFRRPGLPCRG 209 >gi|239756550 PREDICTED: hypothetical protein XP_002344932 [Homo sapiens] Length = 177 Score = 47.0 bits (110), Expect = 3e-05 Identities = 44/112 (39%), Positives = 50/112 (44%), Gaps = 16/112 (14%) Query: 163 LGKGPPPRPA--PPG---TRCCPGARAAQLLREAAAAAQGLRAPAARLPEPT--RRAPGR 215 LG GP PR P G R PG RA L AA L A+ P P RRAP R Sbjct: 29 LGPGPSPRRGRLPSGGLRLRARPGRRALGLPSPLELAAPSLVPNASASPRPVSCRRAPPR 88 Query: 216 PGCLPTAAAAAADALWRSRRAPLPPTEF-LSPRRTRPRKHPERTRRPAQRLE 266 P +P AA WR R P P + +P R RP P R+ PA+R E Sbjct: 89 P--VPGAAR------WRGRPEPRPGSPAGPAPTRARPLGAPGRSAPPARRRE 132 >gi|239749077 PREDICTED: hypothetical protein XP_002346898 [Homo sapiens] Length = 334 Score = 47.0 bits (110), Expect = 3e-05 Identities = 94/341 (27%), Positives = 122/341 (35%), Gaps = 82/341 (24%) Query: 33 KGKTICTRFGDK-----RSSGQAGNKSERELQARTPAPP---RERGESSSPRGPTLRGRA 84 K KT C R D R S Q G++ +A AP +E+G++S PT R Sbjct: 8 KNKTTCLRGSDTAGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPRPTC-SRG 66 Query: 85 KTTRGR-SQGAGATETSAGNSAATAAPHPTPASYPQGTISPPQLPAPRPKRFGGKQRPLW 143 +T RGR +GA E AG A P P A+ + + R L Sbjct: 67 RTERGRVERGADHQERPAG--APAHRPVPAAAAILRAAV----------------HRVLR 108 Query: 144 RIRGWETTVARLPEPRVGKLGKGP----PPRPAPPGTRCCPGARAAQLLREAAAAAQGLR 199 +R A + + G +GP PPR G R G +A L GLR Sbjct: 109 VLRA----AAAVRDAERGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLR 164 Query: 200 APAARLPEPT--------RRAPGRPGCLPTAAAAAADALWRSRRAPLPPTEFLSPRRTRP 251 PA +P P R P C + AA L RP Sbjct: 165 PPAL-VPVPLATPLLLEGRSEPSTRACAVSGGQAA-----------------LLGAHVRP 206 Query: 252 RKHPERTRRPAQRLE-----SGCRGHCSRGAPALAPPKLSPPFPCLAQSASRAAGARRAL 306 P+R R A R + +G RG +G A A P+ P + A GARRAL Sbjct: 207 A--PDRAARCAPRAKKAGANAGARG---QGRGAAAGPERPPHVQGRRPAPRGAVGARRAL 261 Query: 307 SASRGRRGLLGSGSLALPLPGCREPRQRLHGSDGAAGA-RC 346 + G+ G L RE R+R AAG RC Sbjct: 262 LGAVGKAG---------GLTRARETRRRGEEGVPAAGTPRC 293 >gi|239746104 PREDICTED: hypothetical protein XP_002344198 [Homo sapiens] Length = 398 Score = 47.0 bits (110), Expect = 3e-05 Identities = 83/300 (27%), Positives = 105/300 (35%), Gaps = 50/300 (16%) Query: 29 LRPAKGKTICTRFG------DKRSSGQAGNKSERELQARTPAPPRERGESSSPRGPTLRG 82 LR ++ + TR G +R+ A S R PA + + G LRG Sbjct: 78 LRKSRARLPRTRQGREDAGVGRRNRDPAEPGSLRPTSLGFPARAGQGRVQGAAPGRKLRG 137 Query: 83 RAKTTRGRSQGAGATETSAGNSAATAAPHPTPASYP--QGTISPPQLPAPRPKRFGGKQR 140 KT GRS +G + AG+ AA AA H A + G P +LP P G R Sbjct: 138 EPKTPPGRSGPSGGVRSGAGHRAA-AAEHQLGAGFSVRNGPGPPARLPPAPP---GPLLR 193 Query: 141 PLWRIRGWETTVARLP--EPRVGKLGKGPPPRP---------APPGTRCCPGARAAQLLR 189 P R + P EP KL PPP P PP R L Sbjct: 194 PARPPRPYFPRPRTPPTCEPPSRKL---PPPLPLCRSRWVLAPPPPVRPRLRVLTPPLAL 250 Query: 190 EAAAAAQGLRAPAAR----------------LPEPTRRAPGRPGCLPTAAAAAADALWRS 233 A +G R P+ R L +RRA G AA A + Sbjct: 251 RCALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHALSSERQAAPTRAFCSA 310 Query: 234 RRAPLPPTEFLSPRRTRPRKHPERTRRPAQRLESGCRGHCSRGAPALAPPKLSP-PFPCL 292 P PP+ P P+ + R+P RL R +RGAP P P P P L Sbjct: 311 DPLPRPPS--FVPSLPSPQAQGQAVRQP--RL---LRAALARGAPRGRTPSPRPGPAPAL 363 Score = 33.5 bits (75), Expect = 0.29 Identities = 51/199 (25%), Positives = 63/199 (31%), Gaps = 27/199 (13%) Query: 141 PLWRIRGWETTVARLPEPRVGK---LGKGPPPRPAPPGTRCCPGARAAQLLREAAAAAQG 197 P+ R R ARL V LG PP R P +R PG + A Sbjct: 3 PVGRSRSENADTARLFGTAVYTFEVLGALPPDRSPTPRSRVSPGVTSL-----AVGPGNP 57 Query: 198 LRAPAARLPEPTRRAPGRPGC---------LPTAAAAAADA-LWRSRRAPLPPTEFLSPR 247 R + +P PG PG LP DA + R R P P Sbjct: 58 TRCQRSGVPY---EGPGAPGGQQLRKSRARLPRTRQGREDAGVGRRNRDPAEPGSL---- 110 Query: 248 RTRPRKHPERTRRPAQRLESGCRGHCSRGAPALAPPKLSPPFPCLAQSASRAAGARRALS 307 RP R R++ G RG P P + P + + RAA A L Sbjct: 111 --RPTSLGFPARAGQGRVQGAAPGRKLRGEPKTPPGRSGPSGGVRSGAGHRAAAAEHQLG 168 Query: 308 ASRGRRGLLGSGSLALPLP 326 A R G + P P Sbjct: 169 AGFSVRNGPGPPARLPPAP 187 >gi|239745514 PREDICTED: hypothetical protein XP_002343509 [Homo sapiens] Length = 177 Score = 47.0 bits (110), Expect = 3e-05 Identities = 44/112 (39%), Positives = 50/112 (44%), Gaps = 16/112 (14%) Query: 163 LGKGPPPRPA--PPG---TRCCPGARAAQLLREAAAAAQGLRAPAARLPEPT--RRAPGR 215 LG GP PR P G R PG RA L AA L A+ P P RRAP R Sbjct: 29 LGPGPSPRRGRLPSGGLRLRARPGRRALGLPSPLELAAPSLVPNASASPRPVSCRRAPPR 88 Query: 216 PGCLPTAAAAAADALWRSRRAPLPPTEF-LSPRRTRPRKHPERTRRPAQRLE 266 P +P AA WR R P P + +P R RP P R+ PA+R E Sbjct: 89 P--VPGAAR------WRGRPEPRPGSPAGPAPTRARPLGAPGRSAPPARRRE 132 >gi|239743103 PREDICTED: hypothetical protein XP_002342755 [Homo sapiens] Length = 329 Score = 47.0 bits (110), Expect = 3e-05 Identities = 94/341 (27%), Positives = 122/341 (35%), Gaps = 82/341 (24%) Query: 33 KGKTICTRFGDK-----RSSGQAGNKSERELQARTPAPP---RERGESSSPRGPTLRGRA 84 K KT C R D R S Q G++ +A AP +E+G++S PT R Sbjct: 3 KNKTTCLRGSDTAGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPRPTC-SRG 61 Query: 85 KTTRGR-SQGAGATETSAGNSAATAAPHPTPASYPQGTISPPQLPAPRPKRFGGKQRPLW 143 +T RGR +GA E AG A P P A+ + + R L Sbjct: 62 RTERGRVERGADHQERPAG--APAHRPVPAAAAILRAAV----------------HRVLR 103 Query: 144 RIRGWETTVARLPEPRVGKLGKGP----PPRPAPPGTRCCPGARAAQLLREAAAAAQGLR 199 +R A + + G +GP PPR G R G +A L GLR Sbjct: 104 VLRA----AAAVRDAERGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLR 159 Query: 200 APAARLPEPT--------RRAPGRPGCLPTAAAAAADALWRSRRAPLPPTEFLSPRRTRP 251 PA +P P R P C + AA L RP Sbjct: 160 PPAL-VPVPLATPLLLEGRSEPSTRACAVSGGQAA-----------------LLGAHVRP 201 Query: 252 RKHPERTRRPAQRLE-----SGCRGHCSRGAPALAPPKLSPPFPCLAQSASRAAGARRAL 306 P+R R A R + +G RG +G A A P+ P + A GARRAL Sbjct: 202 A--PDRAARCAPRAKKAGANAGARG---QGRGAAAGPERPPHVQGRRPAPRGAVGARRAL 256 Query: 307 SASRGRRGLLGSGSLALPLPGCREPRQRLHGSDGAAGA-RC 346 + G+ G L RE R+R AAG RC Sbjct: 257 LGAVGKAG---------GLTRARETRRRGEEGVPAAGTPRC 288 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.315 0.132 0.413 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 19,009,086 Number of Sequences: 37866 Number of extensions: 1298255 Number of successful extensions: 15047 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 154 Number of HSP's successfully gapped in prelim test: 1588 Number of HSP's that attempted gapping in prelim test: 9955 Number of HSP's gapped (non-prelim): 5229 length of query: 346 length of database: 18,247,518 effective HSP length: 103 effective length of query: 243 effective length of database: 14,347,320 effective search space: 3486398760 effective search space used: 3486398760 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.