Guide to the Human Genome
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Name: LOC100131722 Sequence: fasta or formatted (131aa) NCBI GI: 169167099
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Other entries for this name:
alt prot {131aa} PREDICTED: hypothetical protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            16.8         22           7
 C cysteine            3.1          4           1
 D aspartate           3.8          5           2
 E glutamate           2.3          3           1
 F phenylalanine       4.6          6           2
 G glycine             6.1          8           2
 H histidine           2.3          3           1
 I isoleucine          1.5          2           1
 K lysine              3.1          4           1
 L leucine             5.3          7           2
 M methionine          1.5          2           1
 N asparagine          0.0          0           0
 P proline            18.3         24           2
 Q glutamine           3.8          5           1
 R arginine            8.4         11           2
 S serine              9.2         12           2
 T threonine           5.3          7           1
 V valine              3.1          4           1
 W tryptophan          1.5          2           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
LOC100132315          0.992   PREDICTED: hypothetical protein 
LOC100131722          0.988   PREDICTED: hypothetical protein 
LOC100132752          0.984   PREDICTED: hypothetical protein 
LOC100131591          0.984   PREDICTED: hypothetical protein 
LOC100131591          0.976   PREDICTED: hypothetical protein 
LOC100128869          0.976   PREDICTED: hypothetical protein 
LOC100133270          0.972   PREDICTED: hypothetical protein 
LOC100132410          0.972   PREDICTED: hypothetical protein 
LOC100128869          0.964   PREDICTED: hypothetical protein 
LOC100132829          0.957   PREDICTED: hypothetical protein 
LOC100133002          0.949   PREDICTED: hypothetical protein 
LOC100132117          0.949   PREDICTED: hypothetical protein 
LOC100132213          0.949   PREDICTED: hypothetical protein 
LOC100129002          0.945   PREDICTED: hypothetical protein 
LOC100132483          0.929   PREDICTED: hypothetical protein 
LOC100133083          0.921   PREDICTED: hypothetical protein 
LOC100131850          0.913   PREDICTED: hypothetical protein 
LOC100131968          0.897   PREDICTED: hypothetical protein 
LOC100131850          0.755   PREDICTED: hypothetical protein 
LOC285556             0.055   PREDICTED: hypothetical protein LOC285556 
LOC285556             0.055   PREDICTED: hypothetical protein LOC285556 
LOC285556             0.055   PREDICTED: hypothetical protein LOC285556 
MAP7                  0.055   microtubule-associated protein 7 
ANKRD43               0.051   ankyrin repeat domain 43 
LOC389333             0.047   hypothetical protein LOC389333 
NACA                  0.047   nascent polypeptide-associated complex alpha subuni...
C2orf55               0.047   hypothetical protein LOC343990 
HES7                  0.043   hairy and enhancer of split 7 
PDLIM5                0.043   PDZ and LIM domain 5 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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