Guide to the Human Genome
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Name: LOC100131722 Sequence: fasta or formatted (131aa) NCBI GI: 169166241
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Other entries for this name:
alt prot {131aa} PREDICTED: hypothetical protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            16.0         21           7
 C cysteine            3.1          4           1
 D aspartate           3.8          5           2
 E glutamate           2.3          3           1
 F phenylalanine       4.6          6           2
 G glycine             6.1          8           2
 H histidine           2.3          3           1
 I isoleucine          1.5          2           1
 K lysine              3.1          4           1
 L leucine             6.1          8           2
 M methionine          1.5          2           1
 N asparagine          0.0          0           0
 P proline            18.3         24           2
 Q glutamine           3.8          5           1
 R arginine            7.6         10           2
 S serine              9.9         13           2
 T threonine           5.3          7           1
 V valine              3.1          4           1
 W tryptophan          1.5          2           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
LOC100132315          0.996   PREDICTED: hypothetical protein 
LOC100132752          0.988   PREDICTED: hypothetical protein 
LOC100131591          0.988   PREDICTED: hypothetical protein 
LOC100131722          0.988   PREDICTED: hypothetical protein 
LOC100131591          0.980   PREDICTED: hypothetical protein 
LOC100128869          0.980   PREDICTED: hypothetical protein 
LOC100133270          0.976   PREDICTED: hypothetical protein 
LOC100132410          0.976   PREDICTED: hypothetical protein 
LOC100128869          0.949   PREDICTED: hypothetical protein 
LOC100132829          0.941   PREDICTED: hypothetical protein 
LOC100133002          0.941   PREDICTED: hypothetical protein 
LOC100132117          0.941   PREDICTED: hypothetical protein 
LOC100132213          0.933   PREDICTED: hypothetical protein 
LOC100129002          0.929   PREDICTED: hypothetical protein 
LOC100132483          0.913   PREDICTED: hypothetical protein 
LOC100133083          0.905   PREDICTED: hypothetical protein 
LOC100131850          0.897   PREDICTED: hypothetical protein 
LOC100131968          0.897   PREDICTED: hypothetical protein 
LOC100131850          0.743   PREDICTED: hypothetical protein 
LOC285556             0.059   PREDICTED: hypothetical protein LOC285556 
LOC285556             0.059   PREDICTED: hypothetical protein LOC285556 
LOC285556             0.059   PREDICTED: hypothetical protein LOC285556 
LOC389333             0.051   hypothetical protein LOC389333 
C2orf55               0.051   hypothetical protein LOC343990 
MAP7                  0.047   microtubule-associated protein 7 
NACA                  0.047   nascent polypeptide-associated complex alpha subuni...
KDM6B                 0.047   lysine (K)-specific demethylase 6B 
FOXF2                 0.047   forkhead box F2 
ANKRD43               0.047   ankyrin repeat domain 43 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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