Guide to the Human Genome
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Name: LOC100131850 Sequence: fasta or formatted (130aa) NCBI GI: 169166239
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Other entries for this name:
alt prot {131aa} PREDICTED: hypothetical protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            15.4         20           4
 C cysteine            3.8          5           1
 D aspartate           3.1          4           2
 E glutamate           2.3          3           1
 F phenylalanine       4.6          6           2
 G glycine             6.2          8           2
 H histidine           2.3          3           1
 I isoleucine          1.5          2           1
 K lysine              3.1          4           1
 L leucine             5.4          7           2
 M methionine          1.5          2           1
 N asparagine          0.0          0           0
 P proline            16.2         21           2
 Q glutamine           4.6          6           1
 R arginine            8.5         11           2
 S serine             10.0         13           2
 T threonine           6.2          8           1
 V valine              3.8          5           2
 W tryptophan          1.5          2           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
LOC100129002          0.956   PREDICTED: hypothetical protein 
LOC100132829          0.944   PREDICTED: hypothetical protein 
LOC100128869          0.932   PREDICTED: hypothetical protein 
LOC100131722          0.924   PREDICTED: hypothetical protein 
LOC100132213          0.924   PREDICTED: hypothetical protein 
LOC100128869          0.924   PREDICTED: hypothetical protein 
LOC100132315          0.912   PREDICTED: hypothetical protein 
LOC100131722          0.908   PREDICTED: hypothetical protein 
LOC100133002          0.908   PREDICTED: hypothetical protein 
LOC100132117          0.908   PREDICTED: hypothetical protein 
LOC100132752          0.904   PREDICTED: hypothetical protein 
LOC100131591          0.904   PREDICTED: hypothetical protein 
LOC100133270          0.904   PREDICTED: hypothetical protein 
LOC100132410          0.904   PREDICTED: hypothetical protein 
LOC100133083          0.904   PREDICTED: hypothetical protein 
LOC100132483          0.904   PREDICTED: hypothetical protein 
LOC100131591          0.900   PREDICTED: hypothetical protein 
LOC100131968          0.872   PREDICTED: hypothetical protein 
LOC100131850          0.780   PREDICTED: hypothetical protein 
LOC100133142          0.052   PREDICTED: similar to zinc finger protein 208 [Homo...
LOC100133142          0.052   PREDICTED: similar to zinc finger protein 208 [Homo...
LOC100129203          0.048   PREDICTED: similar to mCG50504 
LOC285556             0.044   PREDICTED: hypothetical protein LOC285556 
LOC285556             0.044   PREDICTED: hypothetical protein LOC285556 
LOC285556             0.044   PREDICTED: hypothetical protein LOC285556 
IRS2                  0.044   insulin receptor substrate 2 
ZC3H13                0.040   zinc finger CCCH-type containing 13 
C2orf55               0.040   hypothetical protein LOC343990 
LOC389333             0.036   hypothetical protein LOC389333 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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