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Search of human proteins with 169166217
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169166217 PREDICTED: hypothetical protein [Homo sapiens]
(174 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169166217 PREDICTED: hypothetical protein [Homo sapiens] 366 e-102
gi|169167080 PREDICTED: hypothetical protein [Homo sapiens] 236 1e-62
gi|113416229 PREDICTED: hypothetical protein [Homo sapiens] 236 1e-62
gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens] 44 9e-05
gi|239751449 PREDICTED: hypothetical protein XP_002347867 [Homo ... 43 1e-04
gi|239745954 PREDICTED: hypothetical protein XP_002343623 [Homo ... 43 1e-04
gi|239756937 PREDICTED: hypothetical protein [Homo sapiens] 43 2e-04
gi|169163618 PREDICTED: hypothetical protein [Homo sapiens] 42 4e-04
gi|169206489 PREDICTED: hypothetical protein [Homo sapiens] 42 4e-04
gi|169164180 PREDICTED: hypothetical protein [Homo sapiens] 42 4e-04
gi|169205942 PREDICTED: hypothetical protein [Homo sapiens] 42 4e-04
gi|169163382 PREDICTED: hypothetical protein [Homo sapiens] 42 4e-04
gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens] 41 5e-04
gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens] 41 5e-04
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 40 8e-04
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 40 8e-04
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 40 8e-04
gi|171543895 ataxin 2 [Homo sapiens] 40 8e-04
gi|169204930 PREDICTED: hypothetical protein [Homo sapiens] 40 0.001
gi|239750393 PREDICTED: hypothetical protein [Homo sapiens] 40 0.001
gi|239749538 PREDICTED: hypothetical protein XP_002347080 [Homo ... 40 0.001
gi|239744694 PREDICTED: hypothetical protein [Homo sapiens] 40 0.001
gi|239743688 PREDICTED: hypothetical protein XP_002342946 [Homo ... 40 0.001
gi|21618325 forkhead box E1 [Homo sapiens] 40 0.001
gi|210032509 hypothetical protein LOC100130302 [Homo sapiens] 40 0.001
gi|118402590 myosin XV [Homo sapiens] 39 0.002
gi|13376611 zinc finger protein 703 [Homo sapiens] 39 0.002
gi|169206171 PREDICTED: hypothetical protein [Homo sapiens] 39 0.002
gi|33636756 MAP/microtubule affinity-regulating kinase 4 [Homo s... 39 0.002
gi|22538470 eomesodermin [Homo sapiens] 39 0.003
>gi|169166217 PREDICTED: hypothetical protein [Homo sapiens]
Length = 174
Score = 366 bits (939), Expect = e-102
Identities = 174/174 (100%), Positives = 174/174 (100%)
Query: 1 MLRPSPDPSAAASAAGAAAAVAAARSWGRPAPWLAPRASEALWYCFSTPAGVRPSEEQDS 60
MLRPSPDPSAAASAAGAAAAVAAARSWGRPAPWLAPRASEALWYCFSTPAGVRPSEEQDS
Sbjct: 1 MLRPSPDPSAAASAAGAAAAVAAARSWGRPAPWLAPRASEALWYCFSTPAGVRPSEEQDS 60
Query: 61 ASRPSPFVLLQSGRLSTKRPERQASLLPRPAPRGSTGAQVWWAGPGAAAAPPPPGVRQCS 120
ASRPSPFVLLQSGRLSTKRPERQASLLPRPAPRGSTGAQVWWAGPGAAAAPPPPGVRQCS
Sbjct: 61 ASRPSPFVLLQSGRLSTKRPERQASLLPRPAPRGSTGAQVWWAGPGAAAAPPPPGVRQCS 120
Query: 121 ALAGSSVPWFPGGGGGGGSGSARRALRKPSGGGWKEAARPLGCAVCQADFWGAR 174
ALAGSSVPWFPGGGGGGGSGSARRALRKPSGGGWKEAARPLGCAVCQADFWGAR
Sbjct: 121 ALAGSSVPWFPGGGGGGGSGSARRALRKPSGGGWKEAARPLGCAVCQADFWGAR 174
>gi|169167080 PREDICTED: hypothetical protein [Homo sapiens]
Length = 197
Score = 236 bits (601), Expect = 1e-62
Identities = 114/115 (99%), Positives = 114/115 (99%)
Query: 1 MLRPSPDPSAAASAAGAAAAVAAARSWGRPAPWLAPRASEALWYCFSTPAGVRPSEEQDS 60
MLRPSPDPSAAASAAGAAAAVAAARSWGRPAPWLAPRASEALWYCFSTPAGVRPSEEQDS
Sbjct: 1 MLRPSPDPSAAASAAGAAAAVAAARSWGRPAPWLAPRASEALWYCFSTPAGVRPSEEQDS 60
Query: 61 ASRPSPFVLLQSGRLSTKRPERQASLLPRPAPRGSTGAQVWWAGPGAAAAPPPPG 115
ASRPSPFVLLQSGRLSTKRPERQASLLPRPAPRGSTGAQVWWAGPGAAAAPP PG
Sbjct: 61 ASRPSPFVLLQSGRLSTKRPERQASLLPRPAPRGSTGAQVWWAGPGAAAAPPHPG 115
>gi|113416229 PREDICTED: hypothetical protein [Homo sapiens]
Length = 175
Score = 236 bits (601), Expect = 1e-62
Identities = 114/115 (99%), Positives = 114/115 (99%)
Query: 1 MLRPSPDPSAAASAAGAAAAVAAARSWGRPAPWLAPRASEALWYCFSTPAGVRPSEEQDS 60
MLRPSPDPSAAASAAGAAAAVAAARSWGRPAPWLAPRASEALWYCFSTPAGVRPSEEQDS
Sbjct: 1 MLRPSPDPSAAASAAGAAAAVAAARSWGRPAPWLAPRASEALWYCFSTPAGVRPSEEQDS 60
Query: 61 ASRPSPFVLLQSGRLSTKRPERQASLLPRPAPRGSTGAQVWWAGPGAAAAPPPPG 115
ASRPSPFVLLQSGRLSTKRPERQASLLPRPAPRGSTGAQVWWAGPGAAAAPP PG
Sbjct: 61 ASRPSPFVLLQSGRLSTKRPERQASLLPRPAPRGSTGAQVWWAGPGAAAAPPHPG 115
>gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens]
Length = 380
Score = 43.5 bits (101), Expect = 9e-05
Identities = 45/146 (30%), Positives = 54/146 (36%), Gaps = 26/146 (17%)
Query: 10 AAASAAGAAAAVAAARSWGRPAPWLAPRASEALWYCFSTPAGVRPSE-EQDSASRPSPFV 68
AA AAG A+A+ A G P P P +S P G P E EQ +P P
Sbjct: 99 AAQFAAGMASALEALEGGGPPPPPALPT--------WSVPNGPSPEEVEQQKRQQPGPSE 150
Query: 69 LLQSGRLSTKRPERQASLLPRPAPRGSTGAQVWWAGPGAAAAPPPPGVRQCSALAGSSVP 128
++ + P + P P P GP PPPPG L S VP
Sbjct: 151 HIERRVSNAGGPPAPPAGGPPPPP-----------GP-----PPPPGPPPPPGLPPSGVP 194
Query: 129 WFP-GGGGGGGSGSARRALRKPSGGG 153
G GGG A + P GGG
Sbjct: 195 AAAHGAGGGPPPAPPLPAAQGPGGGG 220
>gi|239751449 PREDICTED: hypothetical protein XP_002347867 [Homo
sapiens]
Length = 315
Score = 43.1 bits (100), Expect = 1e-04
Identities = 44/131 (33%), Positives = 59/131 (45%), Gaps = 15/131 (11%)
Query: 4 PSPDPSAAASAAGAAAAVAAARSWGRPAPWLAPRASEALWYCFSTPAGVRPSEEQDSASR 63
P P A A A G +A +A + G P AP A+ W PA + PS +++S
Sbjct: 99 PPAGPVARARARGRSAPGSAQPASGAAGPAAAPEAAPPAW----DPATLPPSRKRNSLGS 154
Query: 64 PSPFVLLQSGRLSTKRPERQASLLPRPAPRGST-GAQVWWAGPGAAAAPPPPGVRQCSAL 122
SP ++ GR+ S+L R AP + GAQV WAG AA R+ +L
Sbjct: 155 -SPLHPVRLGRVRAHAGPAGTSIL-RVAPHPALPGAQVHWAGRHRWAA------RRGKSL 206
Query: 123 AGSSVPWFPGG 133
S W PGG
Sbjct: 207 --QSAWWGPGG 215
>gi|239745954 PREDICTED: hypothetical protein XP_002343623 [Homo
sapiens]
Length = 315
Score = 43.1 bits (100), Expect = 1e-04
Identities = 44/131 (33%), Positives = 59/131 (45%), Gaps = 15/131 (11%)
Query: 4 PSPDPSAAASAAGAAAAVAAARSWGRPAPWLAPRASEALWYCFSTPAGVRPSEEQDSASR 63
P P A A A G +A +A + G P AP A+ W PA + PS +++S
Sbjct: 99 PPAGPVARARARGRSAPGSAQPASGAAGPAAAPEAAPPAW----DPATLPPSRKRNSLGS 154
Query: 64 PSPFVLLQSGRLSTKRPERQASLLPRPAPRGST-GAQVWWAGPGAAAAPPPPGVRQCSAL 122
SP ++ GR+ S+L R AP + GAQV WAG AA R+ +L
Sbjct: 155 -SPLHPVRLGRVRAHAGPAGTSIL-RVAPHPALPGAQVHWAGRHRWAA------RRGKSL 206
Query: 123 AGSSVPWFPGG 133
S W PGG
Sbjct: 207 --QSAWWGPGG 215
>gi|239756937 PREDICTED: hypothetical protein [Homo sapiens]
Length = 294
Score = 42.7 bits (99), Expect = 2e-04
Identities = 44/131 (33%), Positives = 59/131 (45%), Gaps = 15/131 (11%)
Query: 4 PSPDPSAAASAAGAAAAVAAARSWGRPAPWLAPRASEALWYCFSTPAGVRPSEEQDSASR 63
P P A A A G +A +A + G P AP A+ W PA + PS +++S
Sbjct: 99 PPAGPVARARARGRSAPGSAQPASGAAGPAAAPEAAPPAW----DPATLPPSRKRNSLGS 154
Query: 64 PSPFVLLQSGRLSTKRPERQASLLPRPAPRGST-GAQVWWAGPGAAAAPPPPGVRQCSAL 122
SP ++ GR+ S+L R AP + GAQV WAG AA R+ +L
Sbjct: 155 -SPLHPVRLGRVRAHAGPAGPSIL-RVAPHPALPGAQVHWAGRHRWAA------RRGKSL 206
Query: 123 AGSSVPWFPGG 133
S W PGG
Sbjct: 207 --QSAWWGPGG 215
>gi|169163618 PREDICTED: hypothetical protein [Homo sapiens]
Length = 155
Score = 41.6 bits (96), Expect = 4e-04
Identities = 46/153 (30%), Positives = 64/153 (41%), Gaps = 17/153 (11%)
Query: 8 PSAAASAAGAAAAVAAARSWGRPAPWLAPRASEALWYCFSTPAGVRPSEEQDSASRPSPF 67
PS ++ AA +R RP P+A A + F+ P++ S R P
Sbjct: 4 PSHLSTLGREPAASGQSRLLVRPGQVAGPQA--AFYSSFNKMDSRGPNQTWASRQRRRPD 61
Query: 68 VLLQSGRLSTKRPERQASLLPR-PAPRGSTGAQVWWAGPGAAAAPPPPGVRQCSALAGSS 126
L G L++ RP +PR P RG G + G +A+ PG Q G+
Sbjct: 62 AL--EGLLASSRPP-----IPRSPGDRGQAG--LGGVGTHTSASRKAPGEPQLDVTGGAE 112
Query: 127 VPWFPGGGG----GGGSGSARRALRKP-SGGGW 154
P G GG SG++R A R+P SG GW
Sbjct: 113 HGSGPEARGAPAWGGASGASRDAARQPASGCGW 145
>gi|169206489 PREDICTED: hypothetical protein [Homo sapiens]
Length = 564
Score = 41.6 bits (96), Expect = 4e-04
Identities = 36/100 (36%), Positives = 40/100 (40%), Gaps = 20/100 (20%)
Query: 72 SGRLSTKRPERQASLL---PRPAPRGSTGAQVWW-------AGPG---AAAAPPPPGVRQ 118
SG L+T+RP P R S W AGPG A +AP P G +
Sbjct: 73 SGSLTTRRPRDAGEAAVSGPSRQRRTSRARTALWGRRSRRAAGPGLDCAGSAPAPSGAQS 132
Query: 119 C------SALAGSSVPWFPGGGGGGGSGSARRALRKPSGG 152
C SAL W GGGG GS S RA P GG
Sbjct: 133 CGGPAPASALRRPLTQWDASGGGGRGSHSGPRA-GTPGGG 171
Score = 34.3 bits (77), Expect = 0.056
Identities = 41/144 (28%), Positives = 52/144 (36%), Gaps = 28/144 (19%)
Query: 15 AGAAAAVAAARSWGRPAPWLAPRASEALWYCFSTPAGVRPSEEQDSASRPSPFVLLQSGR 74
AG+A A + A+S G PAP A R W ++ G R S A P GR
Sbjct: 121 AGSAPAPSGAQSCGGPAPASALRRPLTQW--DASGGGGRGSHSGPRAGTPG------GGR 172
Query: 75 LSTKRPERQA--SLLPRPAPRGST----GAQVWWAGPGAAAAPPPPGVRQCSALAGSSVP 128
S R+ SL P +GS+ G W G G PPPP
Sbjct: 173 SSRAGARRKTPLSLCPLKLRKGSSRRCQGLGSSWGGSG---TPPPP-----------RAL 218
Query: 129 WFPGGGGGGGSGSARRALRKPSGG 152
W GG G R + ++ G
Sbjct: 219 WNRHGGAAGARAQVRGSEKRACPG 242
>gi|169164180 PREDICTED: hypothetical protein [Homo sapiens]
Length = 155
Score = 41.6 bits (96), Expect = 4e-04
Identities = 46/153 (30%), Positives = 64/153 (41%), Gaps = 17/153 (11%)
Query: 8 PSAAASAAGAAAAVAAARSWGRPAPWLAPRASEALWYCFSTPAGVRPSEEQDSASRPSPF 67
PS ++ AA +R RP P+A A + F+ P++ S R P
Sbjct: 4 PSHLSTLGREPAASGQSRLLVRPGQVAGPQA--AFYSSFNKMDSRGPNQTWASRQRRRPD 61
Query: 68 VLLQSGRLSTKRPERQASLLPR-PAPRGSTGAQVWWAGPGAAAAPPPPGVRQCSALAGSS 126
L G L++ RP +PR P RG G + G +A+ PG Q G+
Sbjct: 62 AL--EGLLASSRPP-----IPRSPGDRGQAG--LGGVGTHTSASRKAPGEPQLDVTGGAE 112
Query: 127 VPWFPGGGG----GGGSGSARRALRKP-SGGGW 154
P G GG SG++R A R+P SG GW
Sbjct: 113 HGSGPEARGAPAWGGASGASRDAARQPASGCGW 145
>gi|169205942 PREDICTED: hypothetical protein [Homo sapiens]
Length = 564
Score = 41.6 bits (96), Expect = 4e-04
Identities = 36/100 (36%), Positives = 40/100 (40%), Gaps = 20/100 (20%)
Query: 72 SGRLSTKRPERQASLL---PRPAPRGSTGAQVWW-------AGPG---AAAAPPPPGVRQ 118
SG L+T+RP P R S W AGPG A +AP P G +
Sbjct: 73 SGSLTTRRPRDAGEAAVSGPSRQRRTSRARTALWGRRSRRAAGPGLDCAGSAPAPSGAQS 132
Query: 119 C------SALAGSSVPWFPGGGGGGGSGSARRALRKPSGG 152
C SAL W GGGG GS S RA P GG
Sbjct: 133 CGGPAPASALRRPLTQWDASGGGGRGSHSGPRA-GTPGGG 171
Score = 34.3 bits (77), Expect = 0.056
Identities = 41/144 (28%), Positives = 52/144 (36%), Gaps = 28/144 (19%)
Query: 15 AGAAAAVAAARSWGRPAPWLAPRASEALWYCFSTPAGVRPSEEQDSASRPSPFVLLQSGR 74
AG+A A + A+S G PAP A R W ++ G R S A P GR
Sbjct: 121 AGSAPAPSGAQSCGGPAPASALRRPLTQW--DASGGGGRGSHSGPRAGTPG------GGR 172
Query: 75 LSTKRPERQA--SLLPRPAPRGST----GAQVWWAGPGAAAAPPPPGVRQCSALAGSSVP 128
S R+ SL P +GS+ G W G G PPPP
Sbjct: 173 SSRAGARRKTPLSLCPLKLRKGSSRRCQGLGSSWGGSG---TPPPP-----------RAL 218
Query: 129 WFPGGGGGGGSGSARRALRKPSGG 152
W GG G R + ++ G
Sbjct: 219 WNRHGGAAGARAQVRGSEKRACPG 242
>gi|169163382 PREDICTED: hypothetical protein [Homo sapiens]
Length = 155
Score = 41.6 bits (96), Expect = 4e-04
Identities = 46/153 (30%), Positives = 64/153 (41%), Gaps = 17/153 (11%)
Query: 8 PSAAASAAGAAAAVAAARSWGRPAPWLAPRASEALWYCFSTPAGVRPSEEQDSASRPSPF 67
PS ++ AA +R RP P+A A + F+ P++ S R P
Sbjct: 4 PSHLSTLGREPAASGQSRLLVRPGQVAGPQA--AFYSSFNKMDSRGPNQTWASRQRRRPD 61
Query: 68 VLLQSGRLSTKRPERQASLLPR-PAPRGSTGAQVWWAGPGAAAAPPPPGVRQCSALAGSS 126
L G L++ RP +PR P RG G + G +A+ PG Q G+
Sbjct: 62 AL--EGLLASSRPP-----IPRSPGDRGQAG--LGGVGTHTSASRKAPGEPQLDVTGGAE 112
Query: 127 VPWFPGGGG----GGGSGSARRALRKP-SGGGW 154
P G GG SG++R A R+P SG GW
Sbjct: 113 HGSGPEARGAPAWGGASGASRDAARQPASGCGW 145
>gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens]
Length = 1120
Score = 41.2 bits (95), Expect = 5e-04
Identities = 47/149 (31%), Positives = 60/149 (40%), Gaps = 29/149 (19%)
Query: 30 PAPWLAPRASEALWYCFSTPAGV----RPSEEQDSASRPSPFV-------------LLQS 72
PAP P A A Y PA RP S SRP P L S
Sbjct: 684 PAPGPPPGAPWAFSYLAGPPATPPDPPRPKRRSHSLSRPGPTEGDAEGEAEGPVGSTLGS 743
Query: 73 GRLSTKRPERQA------SLLPRPAPRGSTGAQVWWAGPGAAAAPPPPGVRQCSALAGSS 126
T+RP R A S+ P PA RG+ +Q + A PPPP ++ S+++G S
Sbjct: 744 YATLTRRPGRSALVRTSPSVTPTPA-RGTPRSQSF-ALRARRKGPPPPPPKRLSSVSGPS 801
Query: 127 VPWFP----GGGGGGGSGSARRALRKPSG 151
P G G +G RR L +P+G
Sbjct: 802 PEPPPLDESPGPKEGATGPRRRTLSEPAG 830
>gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens]
Length = 1202
Score = 41.2 bits (95), Expect = 5e-04
Identities = 47/149 (31%), Positives = 60/149 (40%), Gaps = 29/149 (19%)
Query: 30 PAPWLAPRASEALWYCFSTPAGV----RPSEEQDSASRPSPFV-------------LLQS 72
PAP P A A Y PA RP S SRP P L S
Sbjct: 766 PAPGPPPGAPWAFSYLAGPPATPPDPPRPKRRSHSLSRPGPTEGDAEGEAEGPVGSTLGS 825
Query: 73 GRLSTKRPERQA------SLLPRPAPRGSTGAQVWWAGPGAAAAPPPPGVRQCSALAGSS 126
T+RP R A S+ P PA RG+ +Q + A PPPP ++ S+++G S
Sbjct: 826 YATLTRRPGRSALVRTSPSVTPTPA-RGTPRSQSF-ALRARRKGPPPPPPKRLSSVSGPS 883
Query: 127 VPWFP----GGGGGGGSGSARRALRKPSG 151
P G G +G RR L +P+G
Sbjct: 884 PEPPPLDESPGPKEGATGPRRRTLSEPAG 912
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 40.4 bits (93), Expect = 8e-04
Identities = 53/182 (29%), Positives = 65/182 (35%), Gaps = 35/182 (19%)
Query: 6 PDPSAAASAA-GAAAAVAAARSWGR-PAPWLAPRASEALWYCFSTPAGVRPSEEQDSASR 63
P+ AAAS A A +W R PAP LA R + P P+ SA
Sbjct: 649 PEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPG------APLPWPPATGPGSADG 702
Query: 64 PSPFVLLQSGRLSTKRPERQASLLPRPAPRGSTGAQVWWAGPGAAAAPP--------PPG 115
+ +T P +L P P+P S G AG GA++ P P G
Sbjct: 703 LCTIYETEGPESATPAP---GALDPGPSPGTSGGKAAAGAGAGASSRSPKQARLGELPLG 759
Query: 116 VRQCSAL----------------AGSSVPWFPGGGGGGGSGSARRALRKPSGGGWKEAAR 159
Q S + AG S G GGG +G AR AL G W E
Sbjct: 760 ALQASVVQHLLSRTLLLAAAEGAAGGSGGGPGGAEGGGVTGGARAALSDAELGRWAELLS 819
Query: 160 PL 161
PL
Sbjct: 820 PL 821
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens]
Length = 1124
Score = 40.4 bits (93), Expect = 8e-04
Identities = 53/182 (29%), Positives = 65/182 (35%), Gaps = 35/182 (19%)
Query: 6 PDPSAAASAA-GAAAAVAAARSWGR-PAPWLAPRASEALWYCFSTPAGVRPSEEQDSASR 63
P+ AAAS A A +W R PAP LA R + P P+ SA
Sbjct: 918 PEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPG------APLPWPPATGPGSADG 971
Query: 64 PSPFVLLQSGRLSTKRPERQASLLPRPAPRGSTGAQVWWAGPGAAAAPP--------PPG 115
+ +T P +L P P+P S G AG GA++ P P G
Sbjct: 972 LCTIYETEGPESATPAP---GALDPGPSPGTSGGKAAAGAGAGASSRSPKQARLGELPLG 1028
Query: 116 VRQCSAL----------------AGSSVPWFPGGGGGGGSGSARRALRKPSGGGWKEAAR 159
Q S + AG S G GGG +G AR AL G W E
Sbjct: 1029 ALQASVVQHLLSRTLLLAAAEGAAGGSGGGPGGAEGGGVTGGARAALSDAELGRWAELLS 1088
Query: 160 PL 161
PL
Sbjct: 1089 PL 1090
Score = 30.0 bits (66), Expect = 1.1
Identities = 27/101 (26%), Positives = 37/101 (36%), Gaps = 6/101 (5%)
Query: 31 APWLAPRASEALWYCFSTPAGVRPSEEQDSASRPSPFVLLQSGRLSTKRPERQASLLPRP 90
AP L P +S L + RP D+A+ P P L S L+T P L P
Sbjct: 293 APALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPLP------LAPP 346
Query: 91 APRGSTGAQVWWAGPGAAAAPPPPGVRQCSALAGSSVPWFP 131
+P Q + P + PP + A S+ P
Sbjct: 347 SPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIP 387
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 40.4 bits (93), Expect = 8e-04
Identities = 53/182 (29%), Positives = 65/182 (35%), Gaps = 35/182 (19%)
Query: 6 PDPSAAASAA-GAAAAVAAARSWGR-PAPWLAPRASEALWYCFSTPAGVRPSEEQDSASR 63
P+ AAAS A A +W R PAP LA R + P P+ SA
Sbjct: 610 PEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPG------APLPWPPATGPGSADG 663
Query: 64 PSPFVLLQSGRLSTKRPERQASLLPRPAPRGSTGAQVWWAGPGAAAAPP--------PPG 115
+ +T P +L P P+P S G AG GA++ P P G
Sbjct: 664 LCTIYETEGPESATPAP---GALDPGPSPGTSGGKAAAGAGAGASSRSPKQARLGELPLG 720
Query: 116 VRQCSAL----------------AGSSVPWFPGGGGGGGSGSARRALRKPSGGGWKEAAR 159
Q S + AG S G GGG +G AR AL G W E
Sbjct: 721 ALQASVVQHLLSRTLLLAAAEGAAGGSGGGPGGAEGGGVTGGARAALSDAELGRWAELLS 780
Query: 160 PL 161
PL
Sbjct: 781 PL 782
>gi|171543895 ataxin 2 [Homo sapiens]
Length = 1313
Score = 40.4 bits (93), Expect = 8e-04
Identities = 34/92 (36%), Positives = 41/92 (44%), Gaps = 6/92 (6%)
Query: 60 SASRPSPFVLLQSGRLSTKRPERQASLLPRPAPRGSTGAQVWWAGPGAAAAPPPPG---- 115
+A+ SP V +S R + R SL RPA R G GP +AAPPPPG
Sbjct: 5 AAAPRSPAVATESRRFAAARWPGWRSL-QRPARRSGRGGGGAAPGPYPSAAPPPPGPGPP 63
Query: 116 -VRQCSALAGSSVPWFPGGGGGGGSGSARRAL 146
RQ S + S G GGG +RR L
Sbjct: 64 PSRQSSPPSASDCFGSNGNGGGAFRPGSRRLL 95
Score = 38.5 bits (88), Expect = 0.003
Identities = 36/142 (25%), Positives = 54/142 (38%), Gaps = 10/142 (7%)
Query: 4 PSPDPSAAASAAGAAAAVAAARSWGRPAPWLAPRASEALWYCFSTPAGVRPSEEQDSASR 63
P P+ A+ A+ + S RPAP A E ++ + ++P ++Q
Sbjct: 117 PPAAPTRASPLGARASPPRSGVSLARPAPGCPRPACEPVYGPLTM--SLKPQQQQQQQQ- 173
Query: 64 PSPFVLLQSGRLSTKRPERQASLLPRPAPRGSTGAQVWWAGPGAAAAPPPPGVRQCSALA 123
Q + ++ ++Q P A G A P AA +P V SA A
Sbjct: 174 -------QQQQQQQQQQQQQQQPPPAAANVRKPGGSGLLASPAAAPSPSSSSVSSSSATA 226
Query: 124 GSSVPWFPGGGGGGGSGSARRA 145
SSV GGG G G R +
Sbjct: 227 PSSVVAATSGGGRPGLGRGRNS 248
>gi|169204930 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 39.7 bits (91), Expect = 0.001
Identities = 34/88 (38%), Positives = 38/88 (43%), Gaps = 4/88 (4%)
Query: 79 RPERQASLLPR-PAPRGSTGAQVWWAGPGAAA-APPPPGVRQCSALAGSSVPWFPGGGGG 136
RP+R S L APRG A W G GA PG+ +AL G GGGG
Sbjct: 153 RPQRVRSRLAGLGAPRGGAAAPRGWGGQGAERLGVHQPGLPTHAALRGGGGG--SEGGGG 210
Query: 137 GGSGSARRALRKPSGGGWKEAARPLGCA 164
G S RA + PSG R LG A
Sbjct: 211 GARPSPPRARQPPSGRPRPRRTRLLGSA 238
>gi|239750393 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 39.7 bits (91), Expect = 0.001
Identities = 34/88 (38%), Positives = 38/88 (43%), Gaps = 4/88 (4%)
Query: 79 RPERQASLLPR-PAPRGSTGAQVWWAGPGAAA-APPPPGVRQCSALAGSSVPWFPGGGGG 136
RP+R S L APRG A W G GA PG+ +AL G GGGG
Sbjct: 153 RPQRVRSRLAGLGAPRGGAAAPRGWGGQGAERLGVHQPGLPTHAALRGGGGG--SEGGGG 210
Query: 137 GGSGSARRALRKPSGGGWKEAARPLGCA 164
G S RA + PSG R LG A
Sbjct: 211 GARPSPPRARQPPSGRPRPRRTRLLGSA 238
>gi|239749538 PREDICTED: hypothetical protein XP_002347080 [Homo
sapiens]
Length = 400
Score = 39.7 bits (91), Expect = 0.001
Identities = 39/129 (30%), Positives = 52/129 (40%), Gaps = 16/129 (12%)
Query: 48 TPAGVRPSEEQDSASRPSPFVLLQSGRLSTKRPERQASLLPRPA--PRGSTGAQVWWA-- 103
+PAG R ++ PS + R + E + + PRPA +GS G W
Sbjct: 82 SPAG-RGAQRPPERFLPSSVSAGSAARTLRRGSEARKAQTPRPAGVAQGSGGGGERWLQG 140
Query: 104 -----GPGAAAAPPPPGVRQCSALAGSSVPWFPGGGGGGGSGSARRALRKPSGGGWKE-- 156
G G + APPP +R P P GG G G G L K + GG ++
Sbjct: 141 LGPPRGRGLSTAPPPSSLRLLPPTPRPFPP-APAGGKGEGGGKESAVLWKGAEGGGEKGN 199
Query: 157 ---AARPLG 162
AA PLG
Sbjct: 200 RNMAAAPLG 208
>gi|239744694 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 39.7 bits (91), Expect = 0.001
Identities = 34/88 (38%), Positives = 38/88 (43%), Gaps = 4/88 (4%)
Query: 79 RPERQASLLPR-PAPRGSTGAQVWWAGPGAAA-APPPPGVRQCSALAGSSVPWFPGGGGG 136
RP+R S L APRG A W G GA PG+ +AL G GGGG
Sbjct: 153 RPQRVRSRLAGLGAPRGGAAAPRGWGGQGAERLGVHQPGLPTHAALRGGGGG--SEGGGG 210
Query: 137 GGSGSARRALRKPSGGGWKEAARPLGCA 164
G S RA + PSG R LG A
Sbjct: 211 GARPSPPRARQPPSGRPRPRRTRLLGSA 238
>gi|239743688 PREDICTED: hypothetical protein XP_002342946 [Homo
sapiens]
Length = 400
Score = 39.7 bits (91), Expect = 0.001
Identities = 39/129 (30%), Positives = 52/129 (40%), Gaps = 16/129 (12%)
Query: 48 TPAGVRPSEEQDSASRPSPFVLLQSGRLSTKRPERQASLLPRPA--PRGSTGAQVWWA-- 103
+PAG R ++ PS + R + E + + PRPA +GS G W
Sbjct: 82 SPAG-RGAQRPPERFLPSSVSAGSAARTLRRGSEARKAQTPRPAGVAQGSGGGGERWLQG 140
Query: 104 -----GPGAAAAPPPPGVRQCSALAGSSVPWFPGGGGGGGSGSARRALRKPSGGGWKE-- 156
G G + APPP +R P P GG G G G L K + GG ++
Sbjct: 141 LGPPRGRGLSTAPPPSSLRLLPPTPRPFPP-APAGGKGEGGGKESAVLWKGAEGGGEKGN 199
Query: 157 ---AARPLG 162
AA PLG
Sbjct: 200 RNMAAAPLG 208
>gi|21618325 forkhead box E1 [Homo sapiens]
Length = 373
Score = 39.7 bits (91), Expect = 0.001
Identities = 50/170 (29%), Positives = 67/170 (39%), Gaps = 14/170 (8%)
Query: 10 AAASAAGAAAAVAAARSWGRPAPWLAPRASEALWYCFSTPAGVRPSEEQDSASRPSPFVL 69
AAA+AA AAAA AAA + P P A++ ++ P+ P A+ P P
Sbjct: 164 AAAAAAAAAAAAAAAAIFPGAVPAARPPYPGAVYAGYAPPSLAAPPPVYYPAASPGPC-- 221
Query: 70 LQSGRLSTKRPERQASLLPRPAPRGSTGAQVWWAGPGAAAAPPP------PGVRQCSALA 123
R+ PER S PAP G G +A GA A G R + A
Sbjct: 222 ----RVFGLVPERPLSPELGPAPSG-PGGSCAFASAGAPATTTGYQPAGCTGARPANPSA 276
Query: 124 GSSVPWFPGGGGGGGSGSA-RRALRKPSGGGWKEAARPLGCAVCQADFWG 172
++ P G G+GSA A + +G A G DF+G
Sbjct: 277 YAAAYAGPDGAYPQGAGSAIFAAAGRLAGPASPPAGGSSGGVETTVDFYG 326
>gi|210032509 hypothetical protein LOC100130302 [Homo sapiens]
Length = 887
Score = 39.7 bits (91), Expect = 0.001
Identities = 48/172 (27%), Positives = 65/172 (37%), Gaps = 16/172 (9%)
Query: 3 RPSPDPSAAASAAGAAAAVAAARSWGRPAPWLAPRASEALWY----CFSTPAGVRPSEEQ 58
RP +A A+AA AAAA AAA + PAP LA A+ AL + A P+
Sbjct: 491 RPFSAAAAIAAAAAAAAAAAAAAAAAAPAPALAAAAAPALAAAAAPALAAAAAPAPAPAA 550
Query: 59 DSASRPSPFVLLQSGRLSTKRPERQASLLPRPAPRG---------STGAQVWWAGPGAAA 109
A +P + +++P RP P + Q+ G A
Sbjct: 551 APAVAAAPAAAASAAPSHSQKPSVPLIQASRPCPAAQPPTKFIKIAPAIQLRTGSTGLKA 610
Query: 110 APPPPGVRQCSALAGSSVP-WFPGGGGGGGSGSARRALRKPSGGGWKEAARP 160
V+ AL S P PG G +G + L+ S GG ARP
Sbjct: 611 INVEGPVQGAQALGSSFKPVQAPGSGAPAPAGISGSDLQ--SSGGPLPDARP 660
>gi|118402590 myosin XV [Homo sapiens]
Length = 3530
Score = 39.3 bits (90), Expect = 0.002
Identities = 39/135 (28%), Positives = 53/135 (39%), Gaps = 24/135 (17%)
Query: 4 PSPDPSAAASAAGAAAAVAAARSWGR-PAPWLAPR----ASEALWYCFSTPAGVRPSEEQ 58
P P P + + +G + S R P PW AP A +A W+ F P V P
Sbjct: 674 PPPAPPLSPALSGLPRPASPYGSLRRHPPPWAAPAHVPPAPQASWWAFVEPPAVSPEVPP 733
Query: 59 DSASRPSPFVLLQSGRLSTKRPERQASL--LPRPAPRGSTGAQVWWAGPGAAAAPPP--- 113
D + P P R S + R+ + P +PR S + W A+P P
Sbjct: 734 DLLAFPGP-------RPSFRGSRRRGAAFGFPGASPRASR-RRAW----SPLASPQPSLR 781
Query: 114 --PGVRQCSALAGSS 126
PG+ CS LA S
Sbjct: 782 SSPGLGYCSPLAPPS 796
>gi|13376611 zinc finger protein 703 [Homo sapiens]
Length = 590
Score = 39.3 bits (90), Expect = 0.002
Identities = 40/138 (28%), Positives = 56/138 (40%), Gaps = 14/138 (10%)
Query: 3 RPSPDPSAAASAAGAAA-AVAAARSWGRPAPWLAPRASEALWYCFSTPAGVRPSEEQDSA 61
+P P PS+ ++ AAA + A + GR AP A A+ G P+E++ S
Sbjct: 101 KPDPPPSSKLNSVAAAANGLGAEKDPGRSAPGAASAAAAL------KQLGDSPAEDKSSF 154
Query: 62 SRPSPFVLLQSGRLSTKRPERQASLLPRPAPRGSTGAQVWWAGPGAAAAPPPPGVRQCSA 121
P+ G S K + + S G + + P AA P PP SA
Sbjct: 155 K---PYSKGSGGGDSRKDSGSSSVSSTSSSSSSSPGDKAGFRVPSAACPPFPPHGAPVSA 211
Query: 122 LAGSSVPWFPGGGGGGGS 139
+ SS P GG GGS
Sbjct: 212 SSSSSSP----GGSRGGS 225
>gi|169206171 PREDICTED: hypothetical protein [Homo sapiens]
Length = 466
Score = 39.3 bits (90), Expect = 0.002
Identities = 35/100 (35%), Positives = 39/100 (39%), Gaps = 20/100 (20%)
Query: 72 SGRLSTKRPERQASLL---PRPAPRGSTGAQVWW-------AGPG---AAAAPPPPGVRQ 118
SG L+T+RP P R S W AGPG A +AP P G +
Sbjct: 73 SGSLTTRRPRDAGEAAVSGPSRQRRTSRARTALWGRRSRRAAGPGLDCAGSAPAPSGAQS 132
Query: 119 C------SALAGSSVPWFPGGGGGGGSGSARRALRKPSGG 152
C SAL W GGGG S S RA P GG
Sbjct: 133 CGGPAPASALRRPLTQWDASGGGGRASHSGPRA-GTPGGG 171
Score = 34.7 bits (78), Expect = 0.043
Identities = 41/144 (28%), Positives = 52/144 (36%), Gaps = 28/144 (19%)
Query: 15 AGAAAAVAAARSWGRPAPWLAPRASEALWYCFSTPAGVRPSEEQDSASRPSPFVLLQSGR 74
AG+A A + A+S G PAP A R W ++ G R S A P GR
Sbjct: 121 AGSAPAPSGAQSCGGPAPASALRRPLTQW--DASGGGGRASHSGPRAGTPG------GGR 172
Query: 75 LSTKRPERQA--SLLPRPAPRGST----GAQVWWAGPGAAAAPPPPGVRQCSALAGSSVP 128
S R+ SL P +GS+ G W G G PPPP
Sbjct: 173 SSRAGARRKTPLSLCPLKLRKGSSRRCQGLGSSWGGSG---TPPPP-----------RAL 218
Query: 129 WFPGGGGGGGSGSARRALRKPSGG 152
W GG G R + ++ G
Sbjct: 219 WNRHGGAAGARAQVRGSEKRACPG 242
>gi|33636756 MAP/microtubule affinity-regulating kinase 4 [Homo
sapiens]
Length = 688
Score = 39.3 bits (90), Expect = 0.002
Identities = 43/158 (27%), Positives = 61/158 (38%), Gaps = 23/158 (14%)
Query: 2 LRPSPDPSAAASAA-------GAAAAVAAARSWGRPAPWLAPRASEALWYCFSTPAGVRP 54
L P P++ A G A+ + A S R P +P S A + P
Sbjct: 433 LHPKRSPTSTGEAELKEERLPGRKASCSTAGSGSRGLPPSSPMVSSA----HNPNKAEIP 488
Query: 55 SEEQDSASRPS----PFVLLQSGRLSTKRP-ERQASLLPRPAPRGSTGAQVWWAGPGAAA 109
+DS S P+ + ++ + T+RP + SLLP S +V A P + +
Sbjct: 489 ERRKDSTSTPNNLPPSMMTRRNTYVCTERPGAERPSLLPNGKENSSGTPRVPPASPSSHS 548
Query: 110 APPPPGVRQCSALAGSSVPWFPGG-------GGGGGSG 140
PP G R A + F GG GGGGG G
Sbjct: 549 LAPPSGERSRLARGSTIRSTFHGGQVRDRRAGGGGGGG 586
>gi|22538470 eomesodermin [Homo sapiens]
Length = 686
Score = 38.5 bits (88), Expect = 0.003
Identities = 45/157 (28%), Positives = 59/157 (37%), Gaps = 20/157 (12%)
Query: 8 PSAAASAAGAAAAVAAARSWGRPAPWLAPRASEALWYCFSTPAGVRPSEEQDSASRPSPF 67
PSAAA+AA AAAA AA + + S +Y S P + + P
Sbjct: 115 PSAAAAAAAAAAAAAATARYSMDS------LSSERYYLQS------PGPQGSELAAPCSL 162
Query: 68 VLLQSGRLSTKRPERQASLLPRPAPRGSTGAQVWWAGPGA-AAAPPPPGVRQCSALAGSS 126
Q+ + P PAP G+ PG AA PPG Q AG+
Sbjct: 163 FPYQAAAGAPHGPVY-------PAPNGARYPYGSMLPPGGFPAAVCPPGRAQFGPGAGAG 215
Query: 127 VPWFPGGGGGGGSGSARRALRKPSGGGWKEAARPLGC 163
GGGGG G+ + + P G + AA C
Sbjct: 216 SGAGGSSGGGGGPGTYQYSQGAPLYGPYPGAAAAGSC 252
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.130 0.437
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,782,778
Number of Sequences: 37866
Number of extensions: 667769
Number of successful extensions: 10478
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 261
Number of HSP's successfully gapped in prelim test: 749
Number of HSP's that attempted gapping in prelim test: 6784
Number of HSP's gapped (non-prelim): 3260
length of query: 174
length of database: 18,247,518
effective HSP length: 95
effective length of query: 79
effective length of database: 14,650,248
effective search space: 1157369592
effective search space used: 1157369592
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.