LOC100127989 7272

Name: LOC100127989	Sequence: fasta or formatted (297aa)		NCBI GI: 169163050
Description: PREDICTED: hypothetical protein LOC100127989		Not currently referenced in the text
Other entries for this name: alt prot {297aa} PREDICTED: similar to hCG2014450 alt mRNA {297aa} PREDICTED: similar to hCG2014450
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.1 30 2 C cysteine 4.7 14 1 D aspartate 3.4 10 2 E glutamate 4.4 13 2 F phenylalanine 2.0 6 1 G glycine 8.8 26 2 H histidine 3.7 11 1 I isoleucine 5.1 15 1 K lysine 2.7 8 1 L leucine 8.8 26 2 M methionine 1.3 4 1 N asparagine 2.4 7 2 P proline 12.5 37 2 Q glutamine 3.4 10 2 R arginine 6.4 19 2 S serine 7.1 21 2 T threonine 5.4 16 2 V valine 5.4 16 2 W tryptophan 2.0 6 1 Y tyrosine 0.7 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein LOC100127989 LOC100127989 1.000 PREDICTED: similar to hCG2014450 LOC100127989 0.992 PREDICTED: similar to hCG2014450 LOC100133659 0.560 PREDICTED: similar to mediator complex subunit 15 [... MED15 0.161 mediator complex subunit 15 isoform a MED15 0.161 mediator complex subunit 15 isoform b LOC100294312 0.020 PREDICTED: hypothetical protein XP_002344082 LOC100294220 0.020 PREDICTED: hypothetical protein LOC100294184 0.020 PREDICTED: hypothetical protein COL3A1 0.018 collagen type III alpha 1 preproprotein SF3A2 0.016 splicing factor 3a, subunit 2 COL17A1 0.016 alpha 1 type XVII collagen COL4A1 0.015 alpha 1 type IV collagen preproprotein LOC388199 0.015 hypothetical protein LOC388199 LRP8 0.015 low density lipoprotein receptor-related protein 8 i... LRP8 0.015 low density lipoprotein receptor-related protein 8 i... LRP8 0.015 low density lipoprotein receptor-related protein 8 i... TAF4 0.015 TBP-associated factor 4 HCN2 0.013 hyperpolarization activated cyclic nucleotide-gated... COL11A1 0.013 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.013 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.013 alpha 1 type XI collagen isoform A preproprotein [Ho... LOC100293557 0.013 PREDICTED: hypothetical protein COL8A2 0.013 collagen, type VIII, alpha 2 NPAS3 0.013 neuronal PAS domain protein 3 isoform 2 NPAS3 0.013 neuronal PAS domain protein 3 isoform 1 EIF3F 0.013 eukaryotic translation initiation factor 3, subunit 5... COL4A5 0.013 type IV collagen alpha 5 isoform 2 precursor COL4A5 0.013 type IV collagen alpha 5 isoform 1 precursor COL4A5 0.013 type IV collagen alpha 5 isoform 3 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.