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Search of human proteins with 169160983
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169160983 PREDICTED: hypothetical protein [Homo sapiens]
(261 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169160983 PREDICTED: hypothetical protein [Homo sapiens] 545 e-155
gi|133922600 splicing factor, arginine/serine-rich 16 [Homo sapi... 44 1e-04
gi|169211844 PREDICTED: hypothetical protein [Homo sapiens] 43 3e-04
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 42 4e-04
gi|239758008 PREDICTED: hypothetical protein XP_002346266 [Homo ... 42 4e-04
gi|239756845 PREDICTED: hypothetical protein [Homo sapiens] 41 0.001
gi|169211031 PREDICTED: hypothetical protein [Homo sapiens] 41 0.001
gi|239747203 PREDICTED: hypothetical protein LOC643965 [Homo sap... 40 0.003
gi|239741003 PREDICTED: hypothetical protein LOC643965 [Homo sap... 40 0.003
gi|57864582 hornerin [Homo sapiens] 39 0.003
gi|7710145 methyl-CpG binding domain protein 2 testis-specific i... 39 0.003
gi|4505117 methyl-CpG binding domain protein 2 isoform 1 [Homo s... 39 0.003
gi|239755255 PREDICTED: hypothetical protein [Homo sapiens] 39 0.005
gi|239749748 PREDICTED: hypothetical protein XP_002347156 [Homo ... 39 0.005
gi|239749538 PREDICTED: hypothetical protein XP_002347080 [Homo ... 39 0.005
gi|239744003 PREDICTED: hypothetical protein XP_002343004 [Homo ... 39 0.005
gi|239743688 PREDICTED: hypothetical protein XP_002342946 [Homo ... 39 0.005
gi|27894378 chloride intracellular channel 6 [Homo sapiens] 39 0.005
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 39 0.006
gi|113423529 PREDICTED: hypothetical protein [Homo sapiens] 38 0.008
gi|188497758 ubiquitin associated protein 2-like isoform a [Homo... 38 0.010
gi|188497756 ubiquitin associated protein 2-like isoform b [Homo... 38 0.010
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 38 0.010
gi|90819237 myeloid/lymphoid or mixed-lineage leukemia (trithora... 37 0.013
gi|239756393 PREDICTED: hypothetical protein XP_002344913 [Homo ... 37 0.013
gi|239756307 PREDICTED: similar to ubiquitin-associated protein ... 37 0.013
gi|239750857 PREDICTED: similar to ubiquitin-associated protein ... 37 0.013
gi|239745220 PREDICTED: hypothetical protein [Homo sapiens] 37 0.013
gi|92859871 SMAD family member 6 isoform 1 [Homo sapiens] 37 0.013
gi|38348236 zinc finger protein 497 [Homo sapiens] 37 0.013
>gi|169160983 PREDICTED: hypothetical protein [Homo sapiens]
Length = 261
Score = 545 bits (1405), Expect = e-155
Identities = 261/261 (100%), Positives = 261/261 (100%)
Query: 1 MAGSGLESGKTLRVGSWREENWETEVQGGEGSGRSGRFVGNATWWRSALRSLLAGAEARF 60
MAGSGLESGKTLRVGSWREENWETEVQGGEGSGRSGRFVGNATWWRSALRSLLAGAEARF
Sbjct: 1 MAGSGLESGKTLRVGSWREENWETEVQGGEGSGRSGRFVGNATWWRSALRSLLAGAEARF 60
Query: 61 QGLEEKASSGEGLGWRGGRETGCGGWEPPKPLGRRHWRREGQSSRQRTADFPREEGALGR 120
QGLEEKASSGEGLGWRGGRETGCGGWEPPKPLGRRHWRREGQSSRQRTADFPREEGALGR
Sbjct: 61 QGLEEKASSGEGLGWRGGRETGCGGWEPPKPLGRRHWRREGQSSRQRTADFPREEGALGR 120
Query: 121 RLRPSPRGKSGGGSRGGSRRALVLSSLQDPPRRGHRCLRERRRGSGVAAGTLLRGRGRRR 180
RLRPSPRGKSGGGSRGGSRRALVLSSLQDPPRRGHRCLRERRRGSGVAAGTLLRGRGRRR
Sbjct: 121 RLRPSPRGKSGGGSRGGSRRALVLSSLQDPPRRGHRCLRERRRGSGVAAGTLLRGRGRRR 180
Query: 181 EAGTRRPAQGARSEEDPGARRLLPGLRSRRPVPSTCDLHPPHRRHGPGNLFQRPFQGDCR 240
EAGTRRPAQGARSEEDPGARRLLPGLRSRRPVPSTCDLHPPHRRHGPGNLFQRPFQGDCR
Sbjct: 181 EAGTRRPAQGARSEEDPGARRLLPGLRSRRPVPSTCDLHPPHRRHGPGNLFQRPFQGDCR 240
Query: 241 FERVQFLVLCVLFLAFSSRRH 261
FERVQFLVLCVLFLAFSSRRH
Sbjct: 241 FERVQFLVLCVLFLAFSSRRH 261
>gi|133922600 splicing factor, arginine/serine-rich 16 [Homo
sapiens]
Length = 674
Score = 44.3 bits (103), Expect = 1e-04
Identities = 41/132 (31%), Positives = 53/132 (40%), Gaps = 12/132 (9%)
Query: 99 REGQSSRQRTADFPREEGALGRRLRPSPRGK--SGGGSRGGSRRALVLSSLQDPPRRGHR 156
R G+ +R R+ + R R R RG+ SGGGSR G R + + P RRG
Sbjct: 410 RSGRHARSRSRSWSRSRSRSRRYSRSRSRGRRHSGGGSRDGHRYS------RSPARRGGY 463
Query: 157 CLRERRRGSGVAAGTLLR-GRGRRREAGTRRPAQGARSEEDPGARRLLPGLRSRRPVPST 215
R R R + R GRG R + +R + + S P R L RS P PS
Sbjct: 464 GPRRRSRSRSHSGDRYRRGGRGLRHHSSSRSRSSWSLS---PSRSRSLTRSRSHSPSPSQ 520
Query: 216 CDLHPPHRRHGP 227
R P
Sbjct: 521 SRSRSRSRSQSP 532
Score = 32.3 bits (72), Expect = 0.43
Identities = 52/182 (28%), Positives = 66/182 (36%), Gaps = 26/182 (14%)
Query: 46 RSALRSLLAGAEAR------FQGLEEKASSGEGLGWRGGRETGCGGWEPPKPL------- 92
RS RS G E + F G +E+A++ G TG +PP P
Sbjct: 312 RSRSRSPTPGREEKITFITSFGGSDEEAAAAAAAAAASGVTTG----KPPAPPQPGGPAP 367
Query: 93 GRRHWRREGQSSRQRTADFPREEGALGRRLRPSPRGKSGGGSRGGSRRALVLSSLQDPPR 152
GR R SS ++ R + R S R + GGG R A S R
Sbjct: 368 GRNASARRRSSSSSSSSSASRTSSSRSSS-RSSSRSRRGGGYYRSGRHARSRSRSWSRSR 426
Query: 153 -RGHRCLRERRRGSGVAAG------TLLRGRGRRREAGTRRPAQGARSEEDPGARRLLPG 205
R R R R RG + G R RR G RR ++ +RS RR G
Sbjct: 427 SRSRRYSRSRSRGRRHSGGGSRDGHRYSRSPARRGGYGPRRRSR-SRSHSGDRYRRGGRG 485
Query: 206 LR 207
LR
Sbjct: 486 LR 487
>gi|169211844 PREDICTED: hypothetical protein [Homo sapiens]
Length = 193
Score = 42.7 bits (99), Expect = 3e-04
Identities = 54/162 (33%), Positives = 66/162 (40%), Gaps = 25/162 (15%)
Query: 28 GGEGSGRSGRFVGNATWWRSALRSLLAGAEARFQGLEEKASSGEGLGWRGGRETGCGGWE 87
GGEG+ G G + RSA R AGA GE GW GR++GC
Sbjct: 30 GGEGAAAGGGGGGLGSGGRSAQRRAGAGARRPIGAAPSVGPGGELQGW--GRKSGC---R 84
Query: 88 PPKPLGRRHWRR-EGQSSRQRTADF----PREEGALGRRLR--PSPRG---KSGGGS--- 134
PP P G R+ +R ++F P + A+ RR R PSPRG + G G+
Sbjct: 85 PPGPEGWAGGRKLRRWLPPRRFSNFCCRSPCAQTAVRRRRRRAPSPRGAGWREGAGAGRG 144
Query: 135 -----RGGSRRALVLSSLQDPPRRGHRCL--RERRRGSGVAA 169
GG A L Q RR C R RRG G A
Sbjct: 145 TPATMAGGEWAAEPLHLPQRGRRRRFTCRSGRPPRRGRGGGA 186
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 42.4 bits (98), Expect = 4e-04
Identities = 46/159 (28%), Positives = 71/159 (44%), Gaps = 12/159 (7%)
Query: 45 WRSALRSLLAGAEARFQGLEEKASSGEGLGWRGGRETGCGGWEPPKPLGRRHWRREGQSS 104
WR A +S AG++ R G + KA++ G+ +GG + P K R G+
Sbjct: 140 WR-AQKSAAAGSKNRGAGAQ-KAAAAAGVKSQGGEK-------PQKAAAAGAKSRSGKKP 190
Query: 105 RQRTADFPREEGALGRRLRPSPR-GKSGGGSRGGSRRALVLSSLQDPPR-RGHRCLRERR 162
R+R A +E GR+ R GK+ GG R RR + R G + ++RR
Sbjct: 191 RRRGAKSRGDEDKKGRQREAKSRFGKTRGGRRKKHRRPKPAAGGAKSRRGGGKKPQKQRR 250
Query: 163 RGSGVAAGTLLRGRGRRREAGTRRPAQGARSEEDPGARR 201
RG A G R G+ R G ++ + ++ GA+R
Sbjct: 251 RGQKAATGGKSR-VGKSRGGGDKKLRRQGQNAALAGAKR 288
Score = 39.7 bits (91), Expect = 0.003
Identities = 33/126 (26%), Positives = 50/126 (39%), Gaps = 5/126 (3%)
Query: 68 SSGEGLGWRGGRETGCGGWEPPKPLGRRHWRREGQSSRQRTADFPREEGALGRRLRPSPR 127
+S G RGG + G K G + Q+ R+R P + G +P R
Sbjct: 373 ASAAGAKSRGGGDKK--GLREAKRRGDGRKKPRWQNPRRRAQKAPAAKPRGGGSKKPRRR 430
Query: 128 GKSGGGSRGGSRRALVLSSLQDPPRRGHRCLRERRRGSGVAAGTLLRGRGRRREAGTRRP 187
G SRGG R+ + P RRG + ++ + G +GR + AGT+
Sbjct: 431 GPKAAKSRGGKSRS---GGGKKPRRRGQKARQKAAEAGAESRGDKKQGRQKASAAGTKSR 487
Query: 188 AQGARS 193
G +S
Sbjct: 488 GGGLKS 493
Score = 37.7 bits (86), Expect = 0.010
Identities = 56/217 (25%), Positives = 84/217 (38%), Gaps = 43/217 (19%)
Query: 28 GGEGSGRSGRFVGNATWWRSALRSLLAGAEARFQGLEEKASSGEGLGWRGGRETGCGGWE 87
GG+ R G+ R + LAGA+ R + + +G G RG
Sbjct: 258 GGKSRVGKSRGGGDKKLRRQGQNAALAGAKRRGAATAGEKPAAKGRGGRG---------- 307
Query: 88 PPKPLGRRH--WRREGQSSRQRTADFPREEGALGRRLRPSPRGKSGGGSRGGSRRALV-- 143
PK LG ++ W R G+ R+R + + + G GG GG ++A V
Sbjct: 308 -PKSLGGQNPRWGRGGKKPRRRGQ----------KATKAAAAGTKRGG--GGQQKAAVVG 354
Query: 144 LSSLQDPPRRGHRCLRERRRGSGVAAGTLLRGRG--------RRREAGTRRPA---QGAR 192
+ S + RRG ++ RR AAG RG G +RR G ++P R
Sbjct: 355 VKSRKKQRRRG----KKPRRQKASAAGAKSRGGGDKKGLREAKRRGDGRKKPRWQNPRRR 410
Query: 193 SEEDPGARRLLPGLRS-RRPVPSTCDLHPPHRRHGPG 228
+++ P A+ G + RR P R G G
Sbjct: 411 AQKAPAAKPRGGGSKKPRRRGPKAAKSRGGKSRSGGG 447
Score = 32.3 bits (72), Expect = 0.43
Identities = 47/217 (21%), Positives = 85/217 (39%), Gaps = 17/217 (7%)
Query: 8 SGKTLRVGSWREENWETEV------QGGEGSGRSGRFVGNAT--WWRSALRSLLAGAEAR 59
+G RVG + + V GG G+ +S GN W ++A + G +
Sbjct: 534 AGAKSRVGGSKSRQRQKAVAAGATSHGGGGNKQSRGGGGNKPRQWGQTAAAAKTRGGGDK 593
Query: 60 FQGLEE------KASSGEGLGWRGGRETGCGGWEPPKPLGRRHWRREGQSSRQRTADFPR 113
G ++ K+ SG+G G + R+ G + R +++ ++ + A
Sbjct: 594 QPGWQKAAAGVTKSRSGDG-GKKAWRQKAAGTGAKSRKKPWRRGQKDAAAAEKAWATGAT 652
Query: 114 EEGALGRRLRPSPRGKSGGGSRGGSRRALVLSSLQDPPRRGHRCLRERRRGSGVAAGTLL 173
G+ G++ R +G S + + + P RR + + + + V
Sbjct: 653 SRGSGGKQPRWQKPAAAGSESSAAAAVGQEAEARKKPRRRRAKSRGDGGQNAAVGINPWQ 712
Query: 174 RGRGRRREAGTRRPAQGARSEEDPGAR-RLLPGLRSR 209
R RG++ G R GA+S GA+ R G +SR
Sbjct: 713 R-RGKKPRLGKSRGGGGAKSRGSGGAKSRGSGGAKSR 748
>gi|239758008 PREDICTED: hypothetical protein XP_002346266 [Homo
sapiens]
Length = 316
Score = 42.4 bits (98), Expect = 4e-04
Identities = 44/158 (27%), Positives = 61/158 (38%), Gaps = 34/158 (21%)
Query: 47 SALRSLLAGAEARFQGLEEKASSGEGLGWRGGRETGCGGWEPPKPLGRRHWRRE------ 100
+AL L A+ + + A+ LG GC G EPP R W R
Sbjct: 76 TALLPLSHRGRAQRRSMHAAAAQERSLG------RGCLGKEPPN---RESWTRSDPRHCI 126
Query: 101 ----GQSSRQRTADFPREEGALGRRLRPSPRGKSGGGSRGGSRRALVLSSLQDPPRRGHR 156
+S + P+ G G++ R +G SRGG + PRRG +
Sbjct: 127 SQDASRSGSRVCRSRPQTRGGGGKKPRRQKDAAAGAKSRGGKK-----------PRRGRK 175
Query: 157 CLRERRRGS-GVAAGTLLRGRGRRREAGTRRPAQGARS 193
RRRG AAG RG G ++ + A GA+S
Sbjct: 176 ---PRRRGQKSTAAGAKSRGEGGKKPRQQKPAAAGAKS 210
Score = 29.3 bits (64), Expect = 3.6
Identities = 29/108 (26%), Positives = 43/108 (39%), Gaps = 14/108 (12%)
Query: 2 AGSGLESGKTLRVGSWREENWETEVQGGEGSGRSGRFVGNAT-------------WWRSA 48
A SGL K+ R G + W E GE G G+ A W ++A
Sbjct: 208 AKSGLGDKKSRRWGRKKPGRWGQEAVAGETCGGGGKKPQKAAAPGAKSHKKPRRQWQKAA 267
Query: 49 LRSL-LAGAEARFQGLEEKASSGEGLGWRGGRETGCGGWEPPKPLGRR 95
+ +AGAE+ ++ A++ G GG++ G PK G R
Sbjct: 268 AEKVAVAGAESCGGRGQKAAAARAKSGGFGGKKQRRRGQRAPKSRGGR 315
>gi|239756845 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 40.8 bits (94), Expect = 0.001
Identities = 41/121 (33%), Positives = 54/121 (44%), Gaps = 15/121 (12%)
Query: 28 GGEGSGRSGRFVGNATWWRSALRSLLAGAEARFQGLEEKASSGEGLGWRGGRETGCGGWE 87
GGEG+ G G + RSA R AGA GE GW GR++GC
Sbjct: 30 GGEGAAAGGGGGGLGSGGRSAQRRAGAGARRPIGAAPSVGPGGELQGW--GRKSGC---R 84
Query: 88 PPKPLGRRHWRR-EGQSSRQRTADF----PREEGALGRRLR--PSPRG---KSGGGSRGG 137
PP P G R+ +R ++F P + A+ RR R PSPRG + G G+ G
Sbjct: 85 PPGPEGWAGGRKLRRWLPPRRFSNFCCRSPCAQTAVRRRRRRAPSPRGAGWREGAGAGRG 144
Query: 138 S 138
+
Sbjct: 145 T 145
>gi|169211031 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 40.8 bits (94), Expect = 0.001
Identities = 41/121 (33%), Positives = 54/121 (44%), Gaps = 15/121 (12%)
Query: 28 GGEGSGRSGRFVGNATWWRSALRSLLAGAEARFQGLEEKASSGEGLGWRGGRETGCGGWE 87
GGEG+ G G + RSA R AGA GE GW GR++GC
Sbjct: 30 GGEGAAAGGGGGGLGSGGRSAQRRAGAGARRPIGAAPSVGPGGELQGW--GRKSGC---R 84
Query: 88 PPKPLGRRHWRR-EGQSSRQRTADF----PREEGALGRRLR--PSPRG---KSGGGSRGG 137
PP P G R+ +R ++F P + A+ RR R PSPRG + G G+ G
Sbjct: 85 PPGPEGWAGGRKLRRWLPPRRFSNFCCRSPCAQTAVRRRRRRAPSPRGAGWREGAGAGRG 144
Query: 138 S 138
+
Sbjct: 145 T 145
>gi|239747203 PREDICTED: hypothetical protein LOC643965 [Homo
sapiens]
Length = 451
Score = 39.7 bits (91), Expect = 0.003
Identities = 63/203 (31%), Positives = 78/203 (38%), Gaps = 50/203 (24%)
Query: 56 AEARFQGLEEKASSGEGLGWRGGRETGCGGWEPPKPLGRRHWRREGQSSRQRTADFPREE 115
A+ LEE+ +G GL CG P+ + H R Q QR
Sbjct: 88 AQQHLNVLEEERKAGAGLS----PTQRCG----PRAIPGVHPRPARQEEAQR-------- 131
Query: 116 GALGRRLRPSPRGKSGGGSRGGSR-RALVLSSLQ--DPPRRGH--------RCLRERRRG 164
RP+PR SG +G + RA LQ PP RG R LR R RG
Sbjct: 132 -------RPAPR--SGSHEQGAVQARAAGRQQLQHRQPPARGRPVRRRPAARVLRLRCRG 182
Query: 165 SGVAAGTLLRGRGRRREAGTRRPAQGARSEEDPGA-RRLLPGLRSRRPVPSTC------- 216
S A +L + RG++R A P Q R E PGA RR P L+ + P
Sbjct: 183 S--RARSLQQARGQQRVAQGSGPVQ--RREARPGASRRRGPALQQQLGHPRVSVPGGLVQ 238
Query: 217 --DLHPPHRRHGPGNLFQRPFQG 237
P HR H +L Q QG
Sbjct: 239 RGAPRPVHRAHRGPSLQQETHQG 261
>gi|239741003 PREDICTED: hypothetical protein LOC643965 [Homo
sapiens]
Length = 487
Score = 39.7 bits (91), Expect = 0.003
Identities = 63/203 (31%), Positives = 78/203 (38%), Gaps = 50/203 (24%)
Query: 56 AEARFQGLEEKASSGEGLGWRGGRETGCGGWEPPKPLGRRHWRREGQSSRQRTADFPREE 115
A+ LEE+ +G GL CG P+ + H R Q QR
Sbjct: 88 AQQHLNVLEEERKAGAGLS----PTQRCG----PRAIPGVHPRPARQEEAQR-------- 131
Query: 116 GALGRRLRPSPRGKSGGGSRGGSR-RALVLSSLQ--DPPRRGH--------RCLRERRRG 164
RP+PR SG +G + RA LQ PP RG R LR R RG
Sbjct: 132 -------RPAPR--SGSHEQGAVQARAAGRQQLQHRQPPARGRPVRRRPAARVLRLRCRG 182
Query: 165 SGVAAGTLLRGRGRRREAGTRRPAQGARSEEDPGA-RRLLPGLRSRRPVPSTC------- 216
S A +L + RG++R A P Q R E PGA RR P L+ + P
Sbjct: 183 S--RARSLQQARGQQRVAQGSGPVQ--RREARPGASRRRGPALQQQLGHPRVSVPGGLVQ 238
Query: 217 --DLHPPHRRHGPGNLFQRPFQG 237
P HR H +L Q QG
Sbjct: 239 RGAPRPVHRAHRGPSLQQETHQG 261
>gi|57864582 hornerin [Homo sapiens]
Length = 2850
Score = 39.3 bits (90), Expect = 0.003
Identities = 63/248 (25%), Positives = 91/248 (36%), Gaps = 42/248 (16%)
Query: 3 GSGLESGKTLRVGSWREENWETE--VQGGEGSGRSGRFVGNATWWRSALRSLLAGAEARF 60
GSG SG++ G +W++ Q G GSG S + + + RS S
Sbjct: 1392 GSG--SGQSSGFGHHESSSWQSSGCTQHGSGSGHSSSYEQHGS--RSGQSS-----RGER 1442
Query: 61 QGLEEKASSGEGLGWRGGRET------GCGGWEPPKPLGRRHWRREGQSSRQ-------- 106
G +SS G G R++ G G + P P RH GQSS
Sbjct: 1443 HGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYSPYGSGSG 1502
Query: 107 -RTADFPREEG---ALGRRLRPSPRGKSGGGSRGGSRRALVLSSLQDPPRRGH-RCLRER 161
++ P E G + G R S G+S G + GS + Q G +
Sbjct: 1503 WSSSRGPYESGSSHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSSCGQH 1562
Query: 162 RRGSGVAAGTLLRGRGRRREAGTRRPAQGARSEEDPGARRLLPGLRSRRPVPSTCDLHPP 221
SG ++ G G + +G R QG+ S + PG + G R P
Sbjct: 1563 GASSGQSSSHGQHGSGSSQSSGYGR--QGSGSGQSPGHGQRGSGSRQ----------SPS 1610
Query: 222 HRRHGPGN 229
+ RHG G+
Sbjct: 1611 YGRHGSGS 1618
Score = 39.3 bits (90), Expect = 0.003
Identities = 63/248 (25%), Positives = 91/248 (36%), Gaps = 42/248 (16%)
Query: 3 GSGLESGKTLRVGSWREENWETE--VQGGEGSGRSGRFVGNATWWRSALRSLLAGAEARF 60
GSG SG++ G +W++ Q G GSG S + + + RS S
Sbjct: 1862 GSG--SGQSSGFGHHESSSWQSSGYTQHGSGSGHSSSYEQHGS--RSGQSS-----RGEQ 1912
Query: 61 QGLEEKASSGEGLGWRGGRET------GCGGWEPPKPLGRRHWRREGQSSRQ-------- 106
G +SS G G R++ G G + P P RH GQSS
Sbjct: 1913 HGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYGPYGSGSG 1972
Query: 107 -RTADFPREEG---ALGRRLRPSPRGKSGGGSRGGSRRALVLSSLQDPPRRGH-RCLRER 161
++ P E G + G R S G+S G + GS + Q G +
Sbjct: 1973 WSSSRGPYESGSGHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSASGQSSSCGQH 2032
Query: 162 RRGSGVAAGTLLRGRGRRREAGTRRPAQGARSEEDPGARRLLPGLRSRRPVPSTCDLHPP 221
SG ++ G G + +G R QG+ S + PG + G R P
Sbjct: 2033 GASSGQSSSHGQHGSGSSQSSGYGR--QGSGSGQSPGHGQRGSGSRQ----------SPS 2080
Query: 222 HRRHGPGN 229
+ RHG G+
Sbjct: 2081 YGRHGSGS 2088
Score = 39.3 bits (90), Expect = 0.003
Identities = 63/248 (25%), Positives = 91/248 (36%), Gaps = 42/248 (16%)
Query: 3 GSGLESGKTLRVGSWREENWETE--VQGGEGSGRSGRFVGNATWWRSALRSLLAGAEARF 60
GSG SG++ G +W++ Q G GSG S + + + RS S
Sbjct: 2332 GSG--SGQSSGFGHHESSSWQSSGYTQHGSGSGHSSSYEQHGS--RSGQSS-----RGER 2382
Query: 61 QGLEEKASSGEGLGWRGGRET------GCGGWEPPKPLGRRHWRREGQSSRQ-------- 106
G +SS G G R++ G G + P P RH GQSS
Sbjct: 2383 HGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYSPYGSGSG 2442
Query: 107 -RTADFPREEG---ALGRRLRPSPRGKSGGGSRGGSRRALVLSSLQDPPRRGH-RCLRER 161
++ P E G + G R S G+S G + GS + Q G +
Sbjct: 2443 WSSSRGPYESGSGHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSSCGQH 2502
Query: 162 RRGSGVAAGTLLRGRGRRREAGTRRPAQGARSEEDPGARRLLPGLRSRRPVPSTCDLHPP 221
SG ++ G G + +G R QG+ S + PG + G R P
Sbjct: 2503 GASSGQSSSHGQHGSGSSQSSGYGR--QGSGSGQSPGHGQRGSGSRQ----------SPS 2550
Query: 222 HRRHGPGN 229
+ RHG G+
Sbjct: 2551 YGRHGSGS 2558
Score = 37.4 bits (85), Expect = 0.013
Identities = 59/241 (24%), Positives = 88/241 (36%), Gaps = 29/241 (12%)
Query: 2 AGSGLESGKTLRVGSWREENWETEVQGGEGSGRSGRFVGNATWWRSALRSLLAGAEARFQ 61
+GSG SG + S + + Q G GSG S + + + + RS G+ +
Sbjct: 924 SGSGQSSGFGHKSSSGQSSGY---TQHGSGSGHSSSYEQHGSRSGQSSRSEQHGSSSGSS 980
Query: 62 GLEEKASSGEGLGWRGGRETGCGGWEPPKPLGRRHWRREGQSSRQ---------RTADFP 112
+ SG G+ G G + P P RH GQSS ++ P
Sbjct: 981 SSYGQHGSGSRQSLGHGQH-GSGSGQSPSPSRGRHGSGSGQSSSYGPYRSGSGWSSSRGP 1039
Query: 113 REEG---ALGRRLRPSPRGKSGGGSRGGSRRALVLSSLQDPPRRGH-RCLRERRRGSGVA 168
E G + G R S G+S G + GS + Q G + SG +
Sbjct: 1040 YESGSGHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSSCGQHGASSGQS 1099
Query: 169 AGTLLRGRGRRREAGTRRPAQGARSEEDPGARRLLPGLRSRRPVPSTCDLHPPHRRHGPG 228
+ G G + +G R QG+ S + PG + G R P + RHG G
Sbjct: 1100 SSHGQHGSGSSQSSGYGR--QGSGSGQSPGHGQRGSGSRQ----------SPSYGRHGSG 1147
Query: 229 N 229
+
Sbjct: 1148 S 1148
>gi|7710145 methyl-CpG binding domain protein 2 testis-specific
isoform [Homo sapiens]
Length = 302
Score = 39.3 bits (90), Expect = 0.003
Identities = 35/97 (36%), Positives = 42/97 (43%), Gaps = 14/97 (14%)
Query: 98 RREGQSSRQRTA---DFPREEGALGRRLRPSP-RGKSGGGSRGGSRRALVLSSLQDPPRR 153
+ EG+S+ + D E+G G L PSP G G+RGG R + R
Sbjct: 14 QEEGESAAGGSGAGGDSAIEQGGQGSALAPSPVSGVRREGARGGGRGR---GRWKQAGRG 70
Query: 154 GHRCLRERRRGSGVAAGTLLRGRGRRREAGTRRPAQG 190
G C R R RG G RGRGR R G RP G
Sbjct: 71 GGVCGRGRGRGRG-------RGRGRGRGRGRGRPPSG 100
>gi|4505117 methyl-CpG binding domain protein 2 isoform 1 [Homo
sapiens]
Length = 411
Score = 39.3 bits (90), Expect = 0.003
Identities = 35/97 (36%), Positives = 42/97 (43%), Gaps = 14/97 (14%)
Query: 98 RREGQSSRQRTA---DFPREEGALGRRLRPSP-RGKSGGGSRGGSRRALVLSSLQDPPRR 153
+ EG+S+ + D E+G G L PSP G G+RGG R + R
Sbjct: 14 QEEGESAAGGSGAGGDSAIEQGGQGSALAPSPVSGVRREGARGGGRGR---GRWKQAGRG 70
Query: 154 GHRCLRERRRGSGVAAGTLLRGRGRRREAGTRRPAQG 190
G C R R RG G RGRGR R G RP G
Sbjct: 71 GGVCGRGRGRGRG-------RGRGRGRGRGRGRPPSG 100
>gi|239755255 PREDICTED: hypothetical protein [Homo sapiens]
Length = 297
Score = 38.9 bits (89), Expect = 0.005
Identities = 37/113 (32%), Positives = 45/113 (39%), Gaps = 16/113 (14%)
Query: 25 EVQGGEGSGRSGRFVGNATWWRSALRSLLAGAEAR----FQGLEEKASSGEGLGWRGGRE 80
E G G+ R+ + VG + RS +A A AR + E A G G G GG
Sbjct: 164 EAAAGAGAQRAAQAVG------AGGRSHVAPAGARPARGARAAEHPAVGGRGHG-PGGH- 215
Query: 81 TGCGGWEPPKPLGRRHWRREGQSSRQRTADFPREEGALGRRLRPSPRGKSGGG 133
GCGGW P GRR WR G+ L PR +SG G
Sbjct: 216 -GCGGWRWP---GRRRWRGLAPGEEANEGAVGVGGGSAAASLARGPRSESGRG 264
>gi|239749748 PREDICTED: hypothetical protein XP_002347156 [Homo
sapiens]
Length = 446
Score = 38.9 bits (89), Expect = 0.005
Identities = 37/113 (32%), Positives = 45/113 (39%), Gaps = 16/113 (14%)
Query: 25 EVQGGEGSGRSGRFVGNATWWRSALRSLLAGAEAR----FQGLEEKASSGEGLGWRGGRE 80
E G G+ R+ + VG + RS +A A AR + E A G G G GG
Sbjct: 313 EAAAGAGAQRAAQAVG------AGGRSHVAPAGARPARGARAAEHPAVGGRGHG-PGGH- 364
Query: 81 TGCGGWEPPKPLGRRHWRREGQSSRQRTADFPREEGALGRRLRPSPRGKSGGG 133
GCGGW P GRR WR G+ L PR +SG G
Sbjct: 365 -GCGGWRWP---GRRRWRGLAPGEEANEGAVGVGGGSAAASLARGPRSESGRG 413
>gi|239749538 PREDICTED: hypothetical protein XP_002347080 [Homo
sapiens]
Length = 400
Score = 38.9 bits (89), Expect = 0.005
Identities = 50/183 (27%), Positives = 66/183 (36%), Gaps = 16/183 (8%)
Query: 29 GEGSGRSG-RFVGNATWWRSALRSLLAGAEARFQGLEEKASSGEGLGWRGGRETGCGGWE 87
G G+ R RF+ ++ SA R+L G+EAR A +G G GG E G
Sbjct: 85 GRGAQRPPERFLPSSVSAGSAARTLRRGSEARKAQTPRPAGVAQGSG--GGGERWLQGLG 142
Query: 88 PPKPLGRRHWRREGQSSRQRTADFPREEGALGRRLRPSPRGKSGGGSRGGSRRALVL-SS 146
PP+ G TA P L RP P +GG GG + + VL
Sbjct: 143 PPRGRG------------LSTAPPPSSLRLLPPTPRPFPPAPAGGKGEGGGKESAVLWKG 190
Query: 147 LQDPPRRGHRCLRERRRGSGVAAGTLLRGRGRRREAGTRRPAQGARSEEDPGARRLLPGL 206
+ +G+R + G + RRR P S P R L
Sbjct: 191 AEGGGEKGNRNMAAAPLGDPAREAAQAQTGLRRRRPLELVPRPALPSAPSPRIRCFLAPG 250
Query: 207 RSR 209
RSR
Sbjct: 251 RSR 253
>gi|239744003 PREDICTED: hypothetical protein XP_002343004 [Homo
sapiens]
Length = 446
Score = 38.9 bits (89), Expect = 0.005
Identities = 37/113 (32%), Positives = 45/113 (39%), Gaps = 16/113 (14%)
Query: 25 EVQGGEGSGRSGRFVGNATWWRSALRSLLAGAEAR----FQGLEEKASSGEGLGWRGGRE 80
E G G+ R+ + VG + RS +A A AR + E A G G G GG
Sbjct: 313 EAAAGAGAQRAAQAVG------AGGRSHVAPAGARPARGARAAEHPAVGGRGHG-PGGH- 364
Query: 81 TGCGGWEPPKPLGRRHWRREGQSSRQRTADFPREEGALGRRLRPSPRGKSGGG 133
GCGGW P GRR WR G+ L PR +SG G
Sbjct: 365 -GCGGWRWP---GRRRWRGLAPGEEANEGAVGVGGGSAAASLARGPRSESGRG 413
>gi|239743688 PREDICTED: hypothetical protein XP_002342946 [Homo
sapiens]
Length = 400
Score = 38.9 bits (89), Expect = 0.005
Identities = 50/183 (27%), Positives = 66/183 (36%), Gaps = 16/183 (8%)
Query: 29 GEGSGRSG-RFVGNATWWRSALRSLLAGAEARFQGLEEKASSGEGLGWRGGRETGCGGWE 87
G G+ R RF+ ++ SA R+L G+EAR A +G G GG E G
Sbjct: 85 GRGAQRPPERFLPSSVSAGSAARTLRRGSEARKAQTPRPAGVAQGSG--GGGERWLQGLG 142
Query: 88 PPKPLGRRHWRREGQSSRQRTADFPREEGALGRRLRPSPRGKSGGGSRGGSRRALVL-SS 146
PP+ G TA P L RP P +GG GG + + VL
Sbjct: 143 PPRGRG------------LSTAPPPSSLRLLPPTPRPFPPAPAGGKGEGGGKESAVLWKG 190
Query: 147 LQDPPRRGHRCLRERRRGSGVAAGTLLRGRGRRREAGTRRPAQGARSEEDPGARRLLPGL 206
+ +G+R + G + RRR P S P R L
Sbjct: 191 AEGGGEKGNRNMAAAPLGDPAREAAQAQTGLRRRRPLELVPRPALPSAPSPRIRCFLAPG 250
Query: 207 RSR 209
RSR
Sbjct: 251 RSR 253
>gi|27894378 chloride intracellular channel 6 [Homo sapiens]
Length = 686
Score = 38.9 bits (89), Expect = 0.005
Identities = 48/175 (27%), Positives = 63/175 (36%), Gaps = 34/175 (19%)
Query: 15 GSWREENWETEVQGGEGSGRSGRFVGNATWWRSALRSLLAGAEARFQGLE--EKASSGEG 72
GS + EV GE +GRS G W A EA G++ E+A+ G+
Sbjct: 302 GSLSPQAEAIEVAAGESAGRSP---GELAWD--------AAEEAEVPGVKGSEEAAPGDA 350
Query: 73 LGWRGGRETGCGGWEPPKPLGRRHWRREGQSSRQRTADFPREEGALGRRLRPSPRGKSGG 132
G G G + P E + R+R+ + PREE A G G
Sbjct: 351 RADAGEDRVGDGPQQEPG---------EDEERRERSPEGPREEEAAGGEEESPDSSPHGE 401
Query: 133 GSRGGSRRALVLSSLQDPPRRGHRCLRERRRGSGVAAGTLLRGRGRRREAGTRRP 187
SRG + LS+ H GSG AA R GRR + P
Sbjct: 402 ASRGAAEPEAQLSN--------HLAEEGPAEGSGEAA----RVNGRREDGEASEP 444
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 38.5 bits (88), Expect = 0.006
Identities = 36/112 (32%), Positives = 46/112 (41%), Gaps = 13/112 (11%)
Query: 121 RLRPSPRGKSGGGSRGGSRRALVLSSLQDPPR--RGHRCLRERRRGSGVAAGTLLRGRGR 178
R RPSPR + R RR + PPR R +R RRR S +G+
Sbjct: 312 RRRPSPRRRPSPRRRTPPRR------MPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSS 365
Query: 179 RREAGTRRPAQGARSEEDP-GARRLLPGLR--SRRPVPSTCDLHPPHRRHGP 227
R + ++P + R+ P RRL P RR PS PP RH P
Sbjct: 366 RSRSPPKKPPK--RTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSP 415
Score = 29.6 bits (65), Expect = 2.8
Identities = 37/134 (27%), Positives = 45/134 (33%), Gaps = 24/134 (17%)
Query: 94 RRHWRREGQSSRQRTADFPREEGALGRRLRPSPRGKSGGGSRGGSRRALVLSSLQDPPRR 153
RR +RR+ Q S + E RP R G G RR S PR+
Sbjct: 482 RRQYRRQNQQSSSDSGSSSSSEDE-----RPK-RSHVKNGEVGRRRRHSPSRSASPSPRK 535
Query: 154 GHRCLRERRRGSGVAAGTLLRGRGRRREAGTRRPAQGARSEEDPGARRLLPGLRSRRPVP 213
+ T RGR RR + + + S P RR P RR P
Sbjct: 536 RQK-------------ETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTP 582
Query: 214 STCDLHPPHRRHGP 227
S PP RR P
Sbjct: 583 S-----PPPRRRSP 591
>gi|113423529 PREDICTED: hypothetical protein [Homo sapiens]
Length = 276
Score = 38.1 bits (87), Expect = 0.008
Identities = 56/199 (28%), Positives = 65/199 (32%), Gaps = 43/199 (21%)
Query: 32 SGRSGRFVGNATWWRSALRSLLAGAEARFQGLEEKASSGEGLGWRGGRETGCGGWEPPKP 91
+G R G +WR L G E F L G G G RE G GG
Sbjct: 14 TGTGPRIAGGVRFWRRRLGGGQDGGEIIFLHL------GGRRGGEGRREAGGGG------ 61
Query: 92 LGRRHWRREGQSSRQRTADFPREEGALGRRLR--PSPRGKSGGGSRGGSRRALVLSSLQD 149
GR+ RE A RRL PSP G G G R+ +
Sbjct: 62 -GRKS----------------REGAACARRLIRCPSPAPPGGAGGLGEGRQ----DGGGE 100
Query: 150 PPRRGHRCLRERRRGSGVAAGTLLRGRGRRREAGTRRPAQGARSEEDPGARRLLPGLRSR 209
R G RC R RR + R AG G+R E P S
Sbjct: 101 VGRAGRRCCRRHRRLRSSRLWSFKLTPPGRSCAGA-----GSRGESKSFPWPFSP---ST 152
Query: 210 RPVPSTCDLHPPHRRHGPG 228
P+P + L P R GPG
Sbjct: 153 LPLPDSLPLPPSGGRAGPG 171
>gi|188497758 ubiquitin associated protein 2-like isoform a [Homo
sapiens]
Length = 1087
Score = 37.7 bits (86), Expect = 0.010
Identities = 36/113 (31%), Positives = 45/113 (39%), Gaps = 17/113 (15%)
Query: 78 GRETGCGGWEPPKPLGRRHWRREGQSSRQRTADFPREEGALGRRLRPSPRGKSGGGSRGG 137
G++ G G K G+ EG+ +R R D+ R G RR R + RG+ G G
Sbjct: 100 GKKKGVSG---QKDGGQTESNEEGKENRDRDRDYSRRRGGPPRRGRGASRGREFRGQENG 156
Query: 138 SRRALVLSSLQDPPRRGHRCLRERRRGSGVAAGTLLRGRGRRREAGTRRPAQG 190
L + P RG RRG G RGRG G R AQG
Sbjct: 157 ----LDGTKSGGPSGRG---TERGRRGRG-------RGRGGSGRRGGRFSAQG 195
>gi|188497756 ubiquitin associated protein 2-like isoform b [Homo
sapiens]
Length = 983
Score = 37.7 bits (86), Expect = 0.010
Identities = 36/113 (31%), Positives = 45/113 (39%), Gaps = 17/113 (15%)
Query: 78 GRETGCGGWEPPKPLGRRHWRREGQSSRQRTADFPREEGALGRRLRPSPRGKSGGGSRGG 137
G++ G G K G+ EG+ +R R D+ R G RR R + RG+ G G
Sbjct: 100 GKKKGVSG---QKDGGQTESNEEGKENRDRDRDYSRRRGGPPRRGRGASRGREFRGQENG 156
Query: 138 SRRALVLSSLQDPPRRGHRCLRERRRGSGVAAGTLLRGRGRRREAGTRRPAQG 190
L + P RG RRG G RGRG G R AQG
Sbjct: 157 ----LDGTKSGGPSGRG---TERGRRGRG-------RGRGGSGRRGGRFSAQG 195
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 37.7 bits (86), Expect = 0.010
Identities = 40/123 (32%), Positives = 49/123 (39%), Gaps = 18/123 (14%)
Query: 104 SRQRTADFPREEGAL--GRRLRPSPRGKSGGGSRGGSRRALVLSSLQDPPRRGHRCLRER 161
SR R+ + R A GR P RG+S R G R+ ++ RRG R
Sbjct: 506 SRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRS------RNTQRRGRS--RSA 557
Query: 162 RRGSGVAAGTLLRGRGRRREAGTRRPAQGARSEEDPGARRLLPGLRSRRPVPSTCDLHPP 221
RRG + RGR R +R PA+ RS ARR RSR P P
Sbjct: 558 RRGRSHSRSPATRGRSR-----SRTPARRGRSRSRTPARR---RSRSRTPTRRRSRSRTP 609
Query: 222 HRR 224
RR
Sbjct: 610 ARR 612
Score = 34.3 bits (77), Expect = 0.11
Identities = 49/180 (27%), Positives = 63/180 (35%), Gaps = 15/180 (8%)
Query: 45 WRSALRSLLAGAEARFQGLEEKASSGEGLGWRGGRETGCGGWEPPKPLGRRHWRREGQSS 104
WR + RS +R ++ S + GW R T G GR H R
Sbjct: 513 WRRS-RSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRG 571
Query: 105 RQRTADFPREEGALGRRLRPSPRGKSGGGSRGGSRRALVL----SSLQDPPRRGHRCLRE 160
R R+ P G R R +S +R SR S + P RR R
Sbjct: 572 RSRSRT-PARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSP 630
Query: 161 RRRGSGVAAGTLLRGRGRRR------EAGTRRPAQGARSEEDPGARRLLPGLRSRRPVPS 214
RR S + GR R R + +R PA+ RS ARR RSR P+
Sbjct: 631 VRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARR---SGRSRSRTPA 687
Score = 33.5 bits (75), Expect = 0.19
Identities = 37/103 (35%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 98 RREGQSSRQRTADFPREEGALGRRLRPSPRGKSGGGSRGGSRRALVLSSLQDPPRRGHRC 157
RR G+S R RT P G R P+ RG+S SR +RR+ S + P RRG
Sbjct: 642 RRSGRS-RSRT---PARRGR-SRSRTPARRGRSR--SRTPARRS-GRSRSRTPARRGRSR 693
Query: 158 LRERRRGSGVAAGTLLRGRGRRREAGTRRPAQGARSEEDPGAR 200
R RRG + + RGR R RR G+ SE +R
Sbjct: 694 SRTPRRGRSRSRSLVRRGRSHSR-TPQRRGRSGSSSERKNKSR 735
Score = 33.1 bits (74), Expect = 0.25
Identities = 32/108 (29%), Positives = 41/108 (37%), Gaps = 12/108 (11%)
Query: 103 SSRQRTADFPREEGALGRRLRPSPRGKSGGGSRGGSRRALVLSSLQDPPRRGHRCLRERR 162
S R+R+A PR + R PSP+ + SR SRR R R R
Sbjct: 1742 SRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKT------------RTTRRRD 1789
Query: 163 RGSGVAAGTLLRGRGRRREAGTRRPAQGARSEEDPGARRLLPGLRSRR 210
R + + R R R R TRR G+ AR+ SRR
Sbjct: 1790 RSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRTSSRR 1837
Score = 30.8 bits (68), Expect = 1.2
Identities = 39/148 (26%), Positives = 50/148 (33%), Gaps = 14/148 (9%)
Query: 67 ASSGEGLGWRGGRETGCGGWEPPKPLGRRHWRREGQSSRQRTADFPREEGA-----LGRR 121
+S G G G T PPK R R + ++ PR + L R+
Sbjct: 1641 SSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRK 1700
Query: 122 LRPSPRGKSGGG-----SRGGSRRALVLSSLQDPPRRGHRCLRERRRGSGVAAGTLLRGR 176
R S R +S SR R S P R R RR S T R R
Sbjct: 1701 ARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSR-R 1759
Query: 177 GRR---REAGTRRPAQGARSEEDPGARR 201
GR + G +R +R E+ RR
Sbjct: 1760 GRSPSPKPRGLQRSRSRSRREKTRTTRR 1787
Score = 30.4 bits (67), Expect = 1.6
Identities = 28/96 (29%), Positives = 34/96 (35%)
Query: 98 RREGQSSRQRTADFPREEGALGRRLRPSPRGKSGGGSRGGSRRALVLSSLQDPPRRGHRC 157
RR SR R + RR R + G SR + S + P RRG
Sbjct: 611 RRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSR 670
Query: 158 LRERRRGSGVAAGTLLRGRGRRREAGTRRPAQGARS 193
R R SG + RGR R RR +RS
Sbjct: 671 SRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRS 706
>gi|90819237 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 4 isoform 1 [Homo
sapiens]
Length = 1834
Score = 37.4 bits (85), Expect = 0.013
Identities = 43/146 (29%), Positives = 56/146 (38%), Gaps = 22/146 (15%)
Query: 102 QSSRQRTADFPREEGALGRRLRPSPRGKSGGGSRGGSRRALVLSSLQDPPRRGHRCLRER 161
Q S+Q+ D EE + R ++ +R VL LQD RR + L E
Sbjct: 1570 QESKQKDEDDEEEEDDDVDTMLIMQRLEAERRARTAMPAISVLDLLQDEERRRQQQLEEM 1629
Query: 162 RRGSGVAAGTLLRGRGRRREAGTRRPAQGARSEE---------------DPGARRLL--- 203
R+ R R+ E T+R A+ R +E D ARRLL
Sbjct: 1630 RKREAEDRARQEEERRRQEEERTKRDAEEKRRQEEGYYSRLEAERRRQHDEAARRLLEPE 1689
Query: 204 -PGLRSRRPVPSTCDLHPPHRRHGPG 228
PGL R P+P D PP PG
Sbjct: 1690 APGL-CRPPLPR--DYEPPSPSPAPG 1712
>gi|239756393 PREDICTED: hypothetical protein XP_002344913 [Homo
sapiens]
Length = 422
Score = 37.4 bits (85), Expect = 0.013
Identities = 41/121 (33%), Positives = 54/121 (44%), Gaps = 19/121 (15%)
Query: 104 SRQRTADFPREEGALGRRLRPSPRGKSGG----------GSRGGSRRALVLSSLQDPPRR 153
S R+ P E G+ G+R RG +GG G+ GG +A + L RR
Sbjct: 297 SPPRSLVAPSESGSAGKR-----RGTNGGATPRKSCDASGAWGGKAKAHGWAPLTAFLRR 351
Query: 154 GHRCLRERRRGSGVAAGTLLRG-RGRRREAGTR-RPAQGARSEEDP--GARRLLPGLRSR 209
H L + G+G AA T LR R AG+R P + AR +E P R LP L +
Sbjct: 352 LHSALVGVKGGAGGAALTSLRAVPAREGGAGSRSEPREAARGQEPPLRHCRACLPQLSAM 411
Query: 210 R 210
R
Sbjct: 412 R 412
>gi|239756307 PREDICTED: similar to ubiquitin-associated protein 1
(predicted) [Homo sapiens]
Length = 290
Score = 37.4 bits (85), Expect = 0.013
Identities = 39/131 (29%), Positives = 45/131 (34%), Gaps = 4/131 (3%)
Query: 101 GQSSRQRTADFPREEGALGRRLRPSPRGKSGGG--SRGGSRRALVLSSLQDPPRRGHRCL 158
G R E + G P+P G S G RR L L+
Sbjct: 100 GHQERPEEEGEDEAEASSGSEEEPAPSSLQPGSPASPGPGRRLCSLDVLRGVRLELAGAR 159
Query: 159 RERRRGSGVAAG-TLLRG-RGRRREAGTRRPAQGARSEEDPGARRLLPGLRSRRPVPSTC 216
R G V+ LL G RG R + PAQ RS PG P + P PST
Sbjct: 160 RRLSEGKLVSRPRALLHGLRGHRALSLCPSPAQSPRSASPPGPAPQHPAAPASPPRPSTA 219
Query: 217 DLHPPHRRHGP 227
PP R H P
Sbjct: 220 GAIPPLRSHKP 230
>gi|239750857 PREDICTED: similar to ubiquitin-associated protein 1
(predicted) [Homo sapiens]
Length = 290
Score = 37.4 bits (85), Expect = 0.013
Identities = 39/131 (29%), Positives = 45/131 (34%), Gaps = 4/131 (3%)
Query: 101 GQSSRQRTADFPREEGALGRRLRPSPRGKSGGG--SRGGSRRALVLSSLQDPPRRGHRCL 158
G R E + G P+P G S G RR L L+
Sbjct: 100 GHQERPEEEGEDEAEASSGSEEEPAPSSLQPGSPASPGPGRRLCSLDVLRGVRLELAGAR 159
Query: 159 RERRRGSGVAAG-TLLRG-RGRRREAGTRRPAQGARSEEDPGARRLLPGLRSRRPVPSTC 216
R G V+ LL G RG R + PAQ RS PG P + P PST
Sbjct: 160 RRLSEGKLVSRPRALLHGLRGHRALSLCPSPAQSPRSASPPGPAPQHPAAPASPPRPSTA 219
Query: 217 DLHPPHRRHGP 227
PP R H P
Sbjct: 220 GAIPPLRSHKP 230
>gi|239745220 PREDICTED: hypothetical protein [Homo sapiens]
Length = 290
Score = 37.4 bits (85), Expect = 0.013
Identities = 39/131 (29%), Positives = 45/131 (34%), Gaps = 4/131 (3%)
Query: 101 GQSSRQRTADFPREEGALGRRLRPSPRGKSGGG--SRGGSRRALVLSSLQDPPRRGHRCL 158
G R E + G P+P G S G RR L L+
Sbjct: 100 GHQERPEEEGEDEAEASSGSEEEPAPSSLQPGSPASPGPGRRLCSLDVLRGVRLELAGAR 159
Query: 159 RERRRGSGVAAG-TLLRG-RGRRREAGTRRPAQGARSEEDPGARRLLPGLRSRRPVPSTC 216
R G V+ LL G RG R + PAQ RS PG P + P PST
Sbjct: 160 RRLSEGKLVSRPRALLHGLRGHRALSLCPSPAQSPRSASPPGPAPQHPAAPASPPRPSTA 219
Query: 217 DLHPPHRRHGP 227
PP R H P
Sbjct: 220 GAIPPLRSHKP 230
>gi|92859871 SMAD family member 6 isoform 1 [Homo sapiens]
Length = 496
Score = 37.4 bits (85), Expect = 0.013
Identities = 40/129 (31%), Positives = 49/129 (37%), Gaps = 36/129 (27%)
Query: 92 LGRRHWR-------REGQSSRQRTADFPREEGALGRRLRPSPRGKSGGGSRGGSRRALVL 144
L RR WR EG S D E+G+LG R P+PR + GGG R +
Sbjct: 9 LVRRLWRSRVVPDREEGGSGGGGGGD---EDGSLGSRAEPAPRAREGGGCGRSEVRPVA- 64
Query: 145 SSLQDPPRRGHRCLRERRRGSGVAAGTLLRGRGRRREAG-----TRRPAQGARSE----E 195
PRR + +R +G GRRR AG P GA S
Sbjct: 65 ------PRRPRDAVGQRG----------AQGAGRRRRAGGPPRPMSEPGAGAGSSLLDVA 108
Query: 196 DPGARRLLP 204
+PG LP
Sbjct: 109 EPGGPGWLP 117
>gi|38348236 zinc finger protein 497 [Homo sapiens]
Length = 498
Score = 37.4 bits (85), Expect = 0.013
Identities = 35/107 (32%), Positives = 46/107 (42%), Gaps = 17/107 (15%)
Query: 52 LLAGAEARFQGLEEKASSGEGLGWRGGRETGCGGWEPPKPLGRRHWRREGQSSRQRTADF 111
+L + +GL E A SG GW G WE + R + Q + AD
Sbjct: 18 VLCNVKTATRGLSEGAVSG---GW--------GAWENSTEVPREAGDGQRQQATLGAAD- 65
Query: 112 PREEGALGRRLRPSPRGKSGGGSRG-GSRRALVLSSLQDPPRRGHRC 157
E+G GR L P+ G+ G G R + RAL S L + P G RC
Sbjct: 66 --EQGGPGRELGPADGGRDGAGPRSEPADRALRPSPLPEEP--GCRC 108
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.138 0.445
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,102,340
Number of Sequences: 37866
Number of extensions: 785715
Number of successful extensions: 4261
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 346
Number of HSP's that attempted gapping in prelim test: 3928
Number of HSP's gapped (non-prelim): 645
length of query: 261
length of database: 18,247,518
effective HSP length: 100
effective length of query: 161
effective length of database: 14,460,918
effective search space: 2328207798
effective search space used: 2328207798
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.