Search of human proteins with 110624787

Search of human proteins with 110624787

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|110624787 5'-3' exoribonuclease 1 isoform b [Homo sapiens]
         (1693 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|110624787 5'-3' exoribonuclease 1 isoform b [Homo sapiens]        3472   0.0  
gi|110624792 5'-3' exoribonuclease 1 isoform a [Homo sapiens]        3463   0.0  
gi|18860916 5'-3' exoribonuclease 2 [Homo sapiens]                    473   e-133
gi|42475558 SMG-7 homolog isoform 1 [Homo sapiens]                     39   0.043
gi|42476066 SMG-7 homolog isoform 4 [Homo sapiens]                     39   0.043
gi|42476070 SMG-7 homolog isoform 2 [Homo sapiens]                     39   0.043
gi|24431935 reticulon 4 isoform A [Homo sapiens]                       39   0.056
gi|189491748 ataxin 1 [Homo sapiens]                                   39   0.056
gi|51479158 ataxin 1 [Homo sapiens]                                    39   0.056
gi|126090663 zinc finger homeodomain 4 [Homo sapiens]                  38   0.073
gi|163965366 nascent polypeptide-associated complex alpha subuni...    38   0.073
gi|115387123 protocadherin 15 isoform CD1-4 precursor [Homo sapi...    38   0.095
gi|218505798 protocadherin 15 isoform CD1-10 precursor [Homo sap...    38   0.095
gi|218505785 protocadherin 15 isoform CD1-9 precursor [Homo sapi...    38   0.095
gi|218505783 protocadherin 15 isoform CD1-8 precursor [Homo sapi...    38   0.095
gi|218505781 protocadherin 15 isoform CD1-7 precursor [Homo sapi...    38   0.095
gi|218505779 protocadherin 15 isoform CD1-6 precursor [Homo sapi...    38   0.095
gi|218505777 protocadherin 15 isoform CD1-2 precursor [Homo sapi...    38   0.095
gi|218505775 protocadherin 15 isoform CD1-1 precursor [Homo sapi...    38   0.095
gi|55750053 atrophin-1 [Homo sapiens]                                  37   0.16 
gi|55750041 atrophin-1 [Homo sapiens]                                  37   0.16 
gi|50428933 C1q domain containing 1 isoform 1 [Homo sapiens]           36   0.28 
gi|50428931 C1q domain containing 1 isoform 3 [Homo sapiens]           36   0.28 
gi|195963431 transmembrane protein 201 isoform 1 [Homo sapiens]        36   0.28 
gi|91208418 transcription elongation regulator 1 isoform 2 [Homo...    36   0.28 
gi|21327715 transcription elongation regulator 1 isoform 1 [Homo...    36   0.28 
gi|73808090 zinc finger protein 207 isoform b [Homo sapiens]           36   0.28 
gi|15812180 butyrate response factor 1 [Homo sapiens]                  36   0.36 
gi|119943102 CREB binding protein isoform b [Homo sapiens]             36   0.36 
gi|119943104 CREB binding protein isoform a [Homo sapiens]             36   0.36 

>gi|110624787 5'-3' exoribonuclease 1 isoform b [Homo sapiens]
          Length = 1693

 Score = 3472 bits (9003), Expect = 0.0
 Identities = 1693/1693 (100%), Positives = 1693/1693 (100%)

Query: 1    MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
            MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI
Sbjct: 1    MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60

Query: 61   FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGE 120
            FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGE
Sbjct: 61   FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGE 120

Query: 121  TLPTEARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHK 180
            TLPTEARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHK
Sbjct: 121  TLPTEARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHK 180

Query: 181  IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQRVCA 240
            IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQRVCA
Sbjct: 181  IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQRVCA 240

Query: 241  PEETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHL 300
            PEETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHL
Sbjct: 241  PEETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHL 300

Query: 301  HINHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKW 360
            HINHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKW
Sbjct: 301  HINHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKW 360

Query: 361  FESKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWTALDKNEGEMITSKDNLEDET 420
            FESKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWTALDKNEGEMITSKDNLEDET
Sbjct: 361  FESKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWTALDKNEGEMITSKDNLEDET 420

Query: 421  EDDDLFETEFRQYKRTYYMTKMGVDVVSDDFLADQAACYVQAIQWILHYYYHGVQSWSWY 480
            EDDDLFETEFRQYKRTYYMTKMGVDVVSDDFLADQAACYVQAIQWILHYYYHGVQSWSWY
Sbjct: 421  EDDDLFETEFRQYKRTYYMTKMGVDVVSDDFLADQAACYVQAIQWILHYYYHGVQSWSWY 480

Query: 481  YPYHYAPFLSDIHNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMTNEDSP 540
            YPYHYAPFLSDIHNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMTNEDSP
Sbjct: 481  YPYHYAPFLSDIHNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMTNEDSP 540

Query: 541  IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRNQHSECLM 600
            IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRNQHSECLM
Sbjct: 541  IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRNQHSECLM 600

Query: 601  CWYDRDTEFIYPSPWPEKFPAIERCCTRYKIISLDAWRVDINKNKITRIDQKALYFCGFP 660
            CWYDRDTEFIYPSPWPEKFPAIERCCTRYKIISLDAWRVDINKNKITRIDQKALYFCGFP
Sbjct: 601  CWYDRDTEFIYPSPWPEKFPAIERCCTRYKIISLDAWRVDINKNKITRIDQKALYFCGFP 660

Query: 661  TLKHIRHKFFLKKSGVQVFQQSSRGENMMLEILVDAESDELTVENVASSVLGKSVFVNWP 720
            TLKHIRHKFFLKKSGVQVFQQSSRGENMMLEILVDAESDELTVENVASSVLGKSVFVNWP
Sbjct: 661  TLKHIRHKFFLKKSGVQVFQQSSRGENMMLEILVDAESDELTVENVASSVLGKSVFVNWP 720

Query: 721  HLEEARVVAVSDGETKFYLEEPPGTQKLYSGRTAPPSKVVHLGDKEQSNWAKEVQGISEH 780
            HLEEARVVAVSDGETKFYLEEPPGTQKLYSGRTAPPSKVVHLGDKEQSNWAKEVQGISEH
Sbjct: 721  HLEEARVVAVSDGETKFYLEEPPGTQKLYSGRTAPPSKVVHLGDKEQSNWAKEVQGISEH 780

Query: 781  YLRRKGIIINETSAVVYAQLLTGRKYQINQNGEVRLEKQWSKQVVPFVYQTIVKDIRAFD 840
            YLRRKGIIINETSAVVYAQLLTGRKYQINQNGEVRLEKQWSKQVVPFVYQTIVKDIRAFD
Sbjct: 781  YLRRKGIIINETSAVVYAQLLTGRKYQINQNGEVRLEKQWSKQVVPFVYQTIVKDIRAFD 840

Query: 841  SRFSNIKTLDDLFPLRSMVFMLGTPYYGCTGEVQDSGDVITEGRIRVIFSIPCEPNLDAL 900
            SRFSNIKTLDDLFPLRSMVFMLGTPYYGCTGEVQDSGDVITEGRIRVIFSIPCEPNLDAL
Sbjct: 841  SRFSNIKTLDDLFPLRSMVFMLGTPYYGCTGEVQDSGDVITEGRIRVIFSIPCEPNLDAL 900

Query: 901  IQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSRRNPHGDHKANVGLNLKFN 960
            IQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSRRNPHGDHKANVGLNLKFN
Sbjct: 901  IQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSRRNPHGDHKANVGLNLKFN 960

Query: 961  KKNEEVPGYTKKVGSEWMYSSAAEQLLAEYLERAPELFSYIAKNSQEDVFYEDDIWPGEN 1020
            KKNEEVPGYTKKVGSEWMYSSAAEQLLAEYLERAPELFSYIAKNSQEDVFYEDDIWPGEN
Sbjct: 961  KKNEEVPGYTKKVGSEWMYSSAAEQLLAEYLERAPELFSYIAKNSQEDVFYEDDIWPGEN 1020

Query: 1021 ENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEKIEEEVEKCKQRKNNKKVRVTV 1080
            ENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEKIEEEVEKCKQRKNNKKVRVTV
Sbjct: 1021 ENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEKIEEEVEKCKQRKNNKKVRVTV 1080

Query: 1081 KPHLLYRPLEQQHGVIPDRDAEFCLFDRVVNVRENFSVPVGLRGTIIGIKGANREADVLF 1140
            KPHLLYRPLEQQHGVIPDRDAEFCLFDRVVNVRENFSVPVGLRGTIIGIKGANREADVLF
Sbjct: 1081 KPHLLYRPLEQQHGVIPDRDAEFCLFDRVVNVRENFSVPVGLRGTIIGIKGANREADVLF 1140

Query: 1141 EVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGSRSETGNQKLTAIVKPQPAVHQHSS 1200
            EVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGSRSETGNQKLTAIVKPQPAVHQHSS
Sbjct: 1141 EVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGSRSETGNQKLTAIVKPQPAVHQHSS 1200

Query: 1201 SSSVSSGHLGALNHSPQSLFVPTQVPTKDDDEFCNIWQSLQGSGKMQYFQPTIQEKGAVL 1260
            SSSVSSGHLGALNHSPQSLFVPTQVPTKDDDEFCNIWQSLQGSGKMQYFQPTIQEKGAVL
Sbjct: 1201 SSSVSSGHLGALNHSPQSLFVPTQVPTKDDDEFCNIWQSLQGSGKMQYFQPTIQEKGAVL 1260

Query: 1261 PQEISQVNQHHKSGFNDNSVKYQQRKHDPHRKFKEECKSPKAECWSQKMSNKQPNSGIEN 1320
            PQEISQVNQHHKSGFNDNSVKYQQRKHDPHRKFKEECKSPKAECWSQKMSNKQPNSGIEN
Sbjct: 1261 PQEISQVNQHHKSGFNDNSVKYQQRKHDPHRKFKEECKSPKAECWSQKMSNKQPNSGIEN 1320

Query: 1321 FLASLNISKENEVQSSHHGEPPSEEHLSPQSFAMGTRMLKEILKIDGSNTVDHKNEIKQI 1380
            FLASLNISKENEVQSSHHGEPPSEEHLSPQSFAMGTRMLKEILKIDGSNTVDHKNEIKQI
Sbjct: 1321 FLASLNISKENEVQSSHHGEPPSEEHLSPQSFAMGTRMLKEILKIDGSNTVDHKNEIKQI 1380

Query: 1381 ANEIPVSSNRRDEYGLPSQPKQNKKLASYMNKPHSANEYHNVQSMDNMCWPAPSQIPPVS 1440
            ANEIPVSSNRRDEYGLPSQPKQNKKLASYMNKPHSANEYHNVQSMDNMCWPAPSQIPPVS
Sbjct: 1381 ANEIPVSSNRRDEYGLPSQPKQNKKLASYMNKPHSANEYHNVQSMDNMCWPAPSQIPPVS 1440

Query: 1441 TPVTELSRICSLVGMPQPDFSFLRMPQTMTVCQVKLSNGLLVHGPQCHSENEAKEKAALF 1500
            TPVTELSRICSLVGMPQPDFSFLRMPQTMTVCQVKLSNGLLVHGPQCHSENEAKEKAALF
Sbjct: 1441 TPVTELSRICSLVGMPQPDFSFLRMPQTMTVCQVKLSNGLLVHGPQCHSENEAKEKAALF 1500

Query: 1501 ALQQLGSLGMNFPLPSQVFANYPSAVPPGTIPPAFPPPTANIMPSSSHLFGSMPWGPSVP 1560
            ALQQLGSLGMNFPLPSQVFANYPSAVPPGTIPPAFPPPTANIMPSSSHLFGSMPWGPSVP
Sbjct: 1501 ALQQLGSLGMNFPLPSQVFANYPSAVPPGTIPPAFPPPTANIMPSSSHLFGSMPWGPSVP 1560

Query: 1561 VPGKPFHHTLYSGTMPMAGGIPGGVHNQFIPLQVTKKRVANKKNFENKEAQSSQATPVQT 1620
            VPGKPFHHTLYSGTMPMAGGIPGGVHNQFIPLQVTKKRVANKKNFENKEAQSSQATPVQT
Sbjct: 1561 VPGKPFHHTLYSGTMPMAGGIPGGVHNQFIPLQVTKKRVANKKNFENKEAQSSQATPVQT 1620

Query: 1621 SQPDSSNIVKVSPRESSSASLKSSPIAQPASSFQVETASQGHSISHHKSTPISSSRRKSR 1680
            SQPDSSNIVKVSPRESSSASLKSSPIAQPASSFQVETASQGHSISHHKSTPISSSRRKSR
Sbjct: 1621 SQPDSSNIVKVSPRESSSASLKSSPIAQPASSFQVETASQGHSISHHKSTPISSSRRKSR 1680

Query: 1681 KLAVNFGVSKPSE 1693
            KLAVNFGVSKPSE
Sbjct: 1681 KLAVNFGVSKPSE 1693


>gi|110624792 5'-3' exoribonuclease 1 isoform a [Homo sapiens]
          Length = 1706

 Score = 3463 bits (8979), Expect = 0.0
 Identities = 1693/1706 (99%), Positives = 1693/1706 (99%), Gaps = 13/1706 (0%)

Query: 1    MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
            MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI
Sbjct: 1    MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60

Query: 61   FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGE 120
            FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGE
Sbjct: 61   FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGE 120

Query: 121  TLPTEARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHK 180
            TLPTEARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHK
Sbjct: 121  TLPTEARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHK 180

Query: 181  IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQRVCA 240
            IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQRVCA
Sbjct: 181  IMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQRVCA 240

Query: 241  PEETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHL 300
            PEETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHL
Sbjct: 241  PEETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHL 300

Query: 301  HINHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKW 360
            HINHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKW
Sbjct: 301  HINHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKW 360

Query: 361  FESKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWTALDKNEGEMITSKDNLEDET 420
            FESKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWTALDKNEGEMITSKDNLEDET
Sbjct: 361  FESKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWTALDKNEGEMITSKDNLEDET 420

Query: 421  EDDDLFETEFRQYKRTYYMTKMGVDVVSDDFLADQAACYVQAIQWILHYYYHGVQSWSWY 480
            EDDDLFETEFRQYKRTYYMTKMGVDVVSDDFLADQAACYVQAIQWILHYYYHGVQSWSWY
Sbjct: 421  EDDDLFETEFRQYKRTYYMTKMGVDVVSDDFLADQAACYVQAIQWILHYYYHGVQSWSWY 480

Query: 481  YPYHYAPFLSDIHNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMTNEDSP 540
            YPYHYAPFLSDIHNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMTNEDSP
Sbjct: 481  YPYHYAPFLSDIHNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMTNEDSP 540

Query: 541  IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRNQHSECLM 600
            IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRNQHSECLM
Sbjct: 541  IIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRNQHSECLM 600

Query: 601  CWYDRDTEFIYPSPWPEKFPAIERCCTRYKIISLDAWRVDINKNKITRIDQKALYFCGFP 660
            CWYDRDTEFIYPSPWPEKFPAIERCCTRYKIISLDAWRVDINKNKITRIDQKALYFCGFP
Sbjct: 601  CWYDRDTEFIYPSPWPEKFPAIERCCTRYKIISLDAWRVDINKNKITRIDQKALYFCGFP 660

Query: 661  TLKHIRHKFFLKKSGVQVFQQSSRGENMMLEILVDAESDELTVENVASSVLGKSVFVNWP 720
            TLKHIRHKFFLKKSGVQVFQQSSRGENMMLEILVDAESDELTVENVASSVLGKSVFVNWP
Sbjct: 661  TLKHIRHKFFLKKSGVQVFQQSSRGENMMLEILVDAESDELTVENVASSVLGKSVFVNWP 720

Query: 721  HLEEARVVAVSDGETKFYLEEPPGTQKLYSGRTAPPSKVVHLGDKEQSNWAKEVQGISEH 780
            HLEEARVVAVSDGETKFYLEEPPGTQKLYSGRTAPPSKVVHLGDKEQSNWAKEVQGISEH
Sbjct: 721  HLEEARVVAVSDGETKFYLEEPPGTQKLYSGRTAPPSKVVHLGDKEQSNWAKEVQGISEH 780

Query: 781  YLRRKGIIINETSAVVYAQLLTGRKYQINQNGEVRLEKQWSKQVVPFVYQTIVKDIRAFD 840
            YLRRKGIIINETSAVVYAQLLTGRKYQINQNGEVRLEKQWSKQVVPFVYQTIVKDIRAFD
Sbjct: 781  YLRRKGIIINETSAVVYAQLLTGRKYQINQNGEVRLEKQWSKQVVPFVYQTIVKDIRAFD 840

Query: 841  SRFSNIKTLDDLFPLRSMVFMLGTPYYGCTGEVQDSGDVITEGRIRVIFSIPCEPNLDAL 900
            SRFSNIKTLDDLFPLRSMVFMLGTPYYGCTGEVQDSGDVITEGRIRVIFSIPCEPNLDAL
Sbjct: 841  SRFSNIKTLDDLFPLRSMVFMLGTPYYGCTGEVQDSGDVITEGRIRVIFSIPCEPNLDAL 900

Query: 901  IQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSRRNPHGDHKANVGLNLKFN 960
            IQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSRRNPHGDHKANVGLNLKFN
Sbjct: 901  IQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSRRNPHGDHKANVGLNLKFN 960

Query: 961  KKNEEVPGYTKKVGSEWMYSSAAEQLLAEYLERAPELFSYIAKNSQEDVFYEDDIWPGEN 1020
            KKNEEVPGYTKKVGSEWMYSSAAEQLLAEYLERAPELFSYIAKNSQEDVFYEDDIWPGEN
Sbjct: 961  KKNEEVPGYTKKVGSEWMYSSAAEQLLAEYLERAPELFSYIAKNSQEDVFYEDDIWPGEN 1020

Query: 1021 ENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEKIEEEVEKCKQRKNNKKVRVTV 1080
            ENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEKIEEEVEKCKQRKNNKKVRVTV
Sbjct: 1021 ENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEKIEEEVEKCKQRKNNKKVRVTV 1080

Query: 1081 KPHLLYRPLEQQHGVIPDRDAEFCLFDRVVNVRENFSVPVGLRGTIIGIKGANREADVLF 1140
            KPHLLYRPLEQQHGVIPDRDAEFCLFDRVVNVRENFSVPVGLRGTIIGIKGANREADVLF
Sbjct: 1081 KPHLLYRPLEQQHGVIPDRDAEFCLFDRVVNVRENFSVPVGLRGTIIGIKGANREADVLF 1140

Query: 1141 EVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGSRSETGNQKLTAIVKPQPAVHQHSS 1200
            EVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGSRSETGNQKLTAIVKPQPAVHQHSS
Sbjct: 1141 EVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGSRSETGNQKLTAIVKPQPAVHQHSS 1200

Query: 1201 SSSVSSGHLGALNHSPQSLFVPTQVPTKDDDEFCNIWQSLQGSGKMQYFQPTIQEKGAVL 1260
            SSSVSSGHLGALNHSPQSLFVPTQVPTKDDDEFCNIWQSLQGSGKMQYFQPTIQEKGAVL
Sbjct: 1201 SSSVSSGHLGALNHSPQSLFVPTQVPTKDDDEFCNIWQSLQGSGKMQYFQPTIQEKGAVL 1260

Query: 1261 PQEISQVNQHHKSGFNDNSVKYQQRKHDPHRKFKEECKSPKAECWSQKMSNKQPNSGIEN 1320
            PQEISQVNQHHKSGFNDNSVKYQQRKHDPHRKFKEECKSPKAECWSQKMSNKQPNSGIEN
Sbjct: 1261 PQEISQVNQHHKSGFNDNSVKYQQRKHDPHRKFKEECKSPKAECWSQKMSNKQPNSGIEN 1320

Query: 1321 FLASLNISKENEVQSSHHGEPPSEEHLSPQSFAMGTRMLKEILKIDGSNTVDHKNEIKQI 1380
            FLASLNISKENEVQSSHHGEPPSEEHLSPQSFAMGTRMLKEILKIDGSNTVDHKNEIKQI
Sbjct: 1321 FLASLNISKENEVQSSHHGEPPSEEHLSPQSFAMGTRMLKEILKIDGSNTVDHKNEIKQI 1380

Query: 1381 ANEIPVSSNRRDEYGLPSQPKQNKKLASYMNKPHSANEYHNVQSMDNMCWPAPSQIPPVS 1440
            ANEIPVSSNRRDEYGLPSQPKQNKKLASYMNKPHSANEYHNVQSMDNMCWPAPSQIPPVS
Sbjct: 1381 ANEIPVSSNRRDEYGLPSQPKQNKKLASYMNKPHSANEYHNVQSMDNMCWPAPSQIPPVS 1440

Query: 1441 TPVTELSRICSLVGMPQPDFSFLRMPQTMTVCQVKLSNGLLVHGPQCHSENEAKEKAALF 1500
            TPVTELSRICSLVGMPQPDFSFLRMPQTMTVCQVKLSNGLLVHGPQCHSENEAKEKAALF
Sbjct: 1441 TPVTELSRICSLVGMPQPDFSFLRMPQTMTVCQVKLSNGLLVHGPQCHSENEAKEKAALF 1500

Query: 1501 ALQQLGSLGMNFPLPSQVFANYPSAVPPGTIPPAFPPPT-------------ANIMPSSS 1547
            ALQQLGSLGMNFPLPSQVFANYPSAVPPGTIPPAFPPPT             ANIMPSSS
Sbjct: 1501 ALQQLGSLGMNFPLPSQVFANYPSAVPPGTIPPAFPPPTGWDHYGSNYALGAANIMPSSS 1560

Query: 1548 HLFGSMPWGPSVPVPGKPFHHTLYSGTMPMAGGIPGGVHNQFIPLQVTKKRVANKKNFEN 1607
            HLFGSMPWGPSVPVPGKPFHHTLYSGTMPMAGGIPGGVHNQFIPLQVTKKRVANKKNFEN
Sbjct: 1561 HLFGSMPWGPSVPVPGKPFHHTLYSGTMPMAGGIPGGVHNQFIPLQVTKKRVANKKNFEN 1620

Query: 1608 KEAQSSQATPVQTSQPDSSNIVKVSPRESSSASLKSSPIAQPASSFQVETASQGHSISHH 1667
            KEAQSSQATPVQTSQPDSSNIVKVSPRESSSASLKSSPIAQPASSFQVETASQGHSISHH
Sbjct: 1621 KEAQSSQATPVQTSQPDSSNIVKVSPRESSSASLKSSPIAQPASSFQVETASQGHSISHH 1680

Query: 1668 KSTPISSSRRKSRKLAVNFGVSKPSE 1693
            KSTPISSSRRKSRKLAVNFGVSKPSE
Sbjct: 1681 KSTPISSSRRKSRKLAVNFGVSKPSE 1706


>gi|18860916 5'-3' exoribonuclease 2 [Homo sapiens]
          Length = 950

 Score =  473 bits (1216), Expect = e-133
 Identities = 264/683 (38%), Positives = 376/683 (55%), Gaps = 96/683 (14%)

Query: 1   MGVPKFYRWISERYP-----CLSEVVKEH---QIP-----------EFDNLYLDMNGIIH 41
           MGVP F+RW+S +YP     C+ E  KE    +IP           EFDNLYLDMNGIIH
Sbjct: 1   MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60

Query: 42  QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
            C+HP D       ++D++   IF Y++ LF I++PR++ +MA+DGVAPRAKMNQQR RR
Sbjct: 61  PCTHPEDKPAPK--NEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRR 118

Query: 102 FRSAKEAEDKI-------KKAIEKGETLPTEA---RFDSNCITPGTEFMARLHEHLKYFV 151
           FR++KE  +         ++ + KG  LP E    RFDSNCITPGTEFM  L + L+Y++
Sbjct: 119 FRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYI 178

Query: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
             +++ D  W+ +T+  S    PGEGEHKIM++IR ++A+P+HDPNT HCL G DADLIM
Sbjct: 179 ADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIM 238

Query: 212 LGLTSHEAHFSLLREEVRFGGKKTQRVCAP----------------------------EE 243
           LGL +HE +F+++REE +    K   +C                               E
Sbjct: 239 LGLATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAE 298

Query: 244 TTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHIN 303
             F  L L+++REY++ E ++    + F +D+ER IDDW+ M F VGNDF+PHLP L I 
Sbjct: 299 GEFIFLRLNVLREYLERELTM--ASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIR 356

Query: 304 HDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFES 363
            +A+  L   Y  ++ + GGY+ ESG++NL R +  ++ + + +   F +   D   F  
Sbjct: 357 ENAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRR 416

Query: 364 KVGNK--------------------YLNEAAGVAAEEARNYKEKK-KLKGQENSLCWTAL 402
           +   K                     L       ++ A N ++   +++ Q NS    ++
Sbjct: 417 RQKEKRKRMKRDQPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYEMRMQNNSS--PSI 474

Query: 403 DKNE-----------GEMITSKDNLEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSDDF 451
             N            G +    ++ + E E +D        +K+ YY  K  VD   + F
Sbjct: 475 SPNTSFTSDGSPSPLGGIKRKAEDSDSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEKF 534

Query: 452 LADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIHNISTLKIHFELG-KPFKP 510
                  YV+ + W+L YYY G  SW WYYP+HYAPF SD   I+ +   FE G KPFKP
Sbjct: 535 RRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKP 594

Query: 511 FEQLLAVLPAASKNLLPACYQHLMTNEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFID 570
            EQL+ V PAAS N LP  ++ LM++ DS II++YP DF  DLNGK+  W+ V L+PF+D
Sbjct: 595 LEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVD 654

Query: 571 EKRLLEAMETCNHSLKKEERKRN 593
           E+RL  A+E     L  EE +RN
Sbjct: 655 ERRLRAALEEVYPDLTPEETRRN 677


>gi|42475558 SMG-7 homolog isoform 1 [Homo sapiens]
          Length = 1137

 Score = 38.9 bits (89), Expect = 0.043
 Identities = 40/148 (27%), Positives = 57/148 (38%), Gaps = 13/148 (8%)

Query: 1521 NYPSAVPPGTIPPAFPPPTANIMPSSSHLFGSMPWGPS-VPVPGKPFHHTLYSGTMPMAG 1579
            ++P A PP    P FPPPT  I P  +   GS    P+ V VPG     T +S   P   
Sbjct: 650  HHPGAFPPLPSRPGFPPPTYVIPPPVAFSMGSGYTFPAGVSVPGTFLQPTAHS---PAGN 706

Query: 1580 GIPGGVHNQFIPLQVTKKRVANKKNFENKEAQSSQATPVQTSQPDSSNIVKVSPRESSSA 1639
             +  G  +  IP    +       N   +++Q     P+ TS P         P   S++
Sbjct: 707  QVQAGKQSH-IPYSQQRPSGPGPMNQGPQQSQPPSQQPL-TSLP-------AQPTAQSTS 757

Query: 1640 SLKSSPIAQPASSFQVETASQGHSISHH 1667
             L+   + Q   S      + G S  HH
Sbjct: 758  QLQVQALTQQQQSPTKAVPALGKSPPHH 785


>gi|42476066 SMG-7 homolog isoform 4 [Homo sapiens]
          Length = 1049

 Score = 38.9 bits (89), Expect = 0.043
 Identities = 40/148 (27%), Positives = 57/148 (38%), Gaps = 13/148 (8%)

Query: 1521 NYPSAVPPGTIPPAFPPPTANIMPSSSHLFGSMPWGPS-VPVPGKPFHHTLYSGTMPMAG 1579
            ++P A PP    P FPPPT  I P  +   GS    P+ V VPG     T +S   P   
Sbjct: 562  HHPGAFPPLPSRPGFPPPTYVIPPPVAFSMGSGYTFPAGVSVPGTFLQPTAHS---PAGN 618

Query: 1580 GIPGGVHNQFIPLQVTKKRVANKKNFENKEAQSSQATPVQTSQPDSSNIVKVSPRESSSA 1639
             +  G  +  IP    +       N   +++Q     P+ TS P         P   S++
Sbjct: 619  QVQAGKQSH-IPYSQQRPSGPGPMNQGPQQSQPPSQQPL-TSLP-------AQPTAQSTS 669

Query: 1640 SLKSSPIAQPASSFQVETASQGHSISHH 1667
             L+   + Q   S      + G S  HH
Sbjct: 670  QLQVQALTQQQQSPTKAVPALGKSPPHH 697


>gi|42476070 SMG-7 homolog isoform 2 [Homo sapiens]
          Length = 1091

 Score = 38.9 bits (89), Expect = 0.043
 Identities = 40/148 (27%), Positives = 57/148 (38%), Gaps = 13/148 (8%)

Query: 1521 NYPSAVPPGTIPPAFPPPTANIMPSSSHLFGSMPWGPS-VPVPGKPFHHTLYSGTMPMAG 1579
            ++P A PP    P FPPPT  I P  +   GS    P+ V VPG     T +S   P   
Sbjct: 604  HHPGAFPPLPSRPGFPPPTYVIPPPVAFSMGSGYTFPAGVSVPGTFLQPTAHS---PAGN 660

Query: 1580 GIPGGVHNQFIPLQVTKKRVANKKNFENKEAQSSQATPVQTSQPDSSNIVKVSPRESSSA 1639
             +  G  +  IP    +       N   +++Q     P+ TS P         P   S++
Sbjct: 661  QVQAGKQSH-IPYSQQRPSGPGPMNQGPQQSQPPSQQPL-TSLP-------AQPTAQSTS 711

Query: 1640 SLKSSPIAQPASSFQVETASQGHSISHH 1667
             L+   + Q   S      + G S  HH
Sbjct: 712  QLQVQALTQQQQSPTKAVPALGKSPPHH 739


>gi|24431935 reticulon 4 isoform A [Homo sapiens]
          Length = 1192

 Score = 38.5 bits (88), Expect = 0.056
 Identities = 38/145 (26%), Positives = 59/145 (40%), Gaps = 20/145 (13%)

Query: 1513 PLPSQVFANYPSAVPPGTIPPAF--PPPTANIMPSSSHLFGSMPWGPSVPVPGKPFHHTL 1570
            P P    A  PS +P    PPA   PPP A++ P +  +     W P  P P  P     
Sbjct: 120  PSPLSAAAVSPSKLPEDDEPPARPPPPPPASVSPQAEPV-----WTPPAPAPAAP----P 170

Query: 1571 YSGTMPMAGGIPGGVHNQFIPLQVTKKRVANKKNFENKEAQSSQATPVQTSQPDSSNIVK 1630
             +   P   G  G V      L    + V  + + EN + +      +   Q D  +++ 
Sbjct: 171  STPAAPKRRGSSGSVDETLFALPAASEPVI-RSSAENMDLKEQPGNTISAGQEDFPSVLL 229

Query: 1631 VSPRESSSASLKS-SPIAQPASSFQ 1654
                  ++ASL S SP++  A+SF+
Sbjct: 230  -----ETAASLPSLSPLS--AASFK 247


>gi|189491748 ataxin 1 [Homo sapiens]
          Length = 815

 Score = 38.5 bits (88), Expect = 0.056
 Identities = 57/231 (24%), Positives = 85/231 (36%), Gaps = 25/231 (10%)

Query: 1384 IPVSSNRRDEYGLPSQPKQNKKLASYMNKPHSANEYHNVQSMDNMCWPAPSQ-IPPVSTP 1442
            +PV++     Y  P QP        Y + PH+     + Q         PSQ IPP + P
Sbjct: 96   VPVATTLPAAYATP-QPGTPVSPVQYAHLPHTFQFIGSSQYSGTYASFIPSQLIPPTANP 154

Query: 1443 VTELSRICSLVGMPQPDFSFLRMPQTMTVCQVKLSNGLLVHGPQCHSENEAKEKAALFAL 1502
            VT  S + S  G   P     +  Q      +  + G L   P   +E + +++      
Sbjct: 155  VT--SAVASAAGATTPS----QRSQLEAYSTLLANMGSLSQTPGHKAEQQQQQQQQQ--- 205

Query: 1503 QQLGSLGMNFPLPSQVFANYPSAVPPGTIPPAFPPPTAN----IMPSSSHLFGSMPWGPS 1558
            QQ            Q       +  PG I P  PPP        + SS    G     P+
Sbjct: 206  QQQHQHQQQQQQQQQQQQQQHLSRAPGLITPGSPPPAQQNQYVHISSSPQNTGRTASPPA 265

Query: 1559 VPVPGKPFHHTLYSGTMPMAGGIPGGVHNQ-------FIPLQVTKKRVANK 1602
            +PV   P H T+   T+ +  G P  V  Q       F+P + TKK  +++
Sbjct: 266  IPVHLHP-HQTMIPHTLTL--GPPSQVVMQYADSGSHFVPREATKKAESSR 313


>gi|51479158 ataxin 1 [Homo sapiens]
          Length = 815

 Score = 38.5 bits (88), Expect = 0.056
 Identities = 57/231 (24%), Positives = 85/231 (36%), Gaps = 25/231 (10%)

Query: 1384 IPVSSNRRDEYGLPSQPKQNKKLASYMNKPHSANEYHNVQSMDNMCWPAPSQ-IPPVSTP 1442
            +PV++     Y  P QP        Y + PH+     + Q         PSQ IPP + P
Sbjct: 96   VPVATTLPAAYATP-QPGTPVSPVQYAHLPHTFQFIGSSQYSGTYASFIPSQLIPPTANP 154

Query: 1443 VTELSRICSLVGMPQPDFSFLRMPQTMTVCQVKLSNGLLVHGPQCHSENEAKEKAALFAL 1502
            VT  S + S  G   P     +  Q      +  + G L   P   +E + +++      
Sbjct: 155  VT--SAVASAAGATTPS----QRSQLEAYSTLLANMGSLSQTPGHKAEQQQQQQQQQ--- 205

Query: 1503 QQLGSLGMNFPLPSQVFANYPSAVPPGTIPPAFPPPTAN----IMPSSSHLFGSMPWGPS 1558
            QQ            Q       +  PG I P  PPP        + SS    G     P+
Sbjct: 206  QQQHQHQQQQQQQQQQQQQQHLSRAPGLITPGSPPPAQQNQYVHISSSPQNTGRTASPPA 265

Query: 1559 VPVPGKPFHHTLYSGTMPMAGGIPGGVHNQ-------FIPLQVTKKRVANK 1602
            +PV   P H T+   T+ +  G P  V  Q       F+P + TKK  +++
Sbjct: 266  IPVHLHP-HQTMIPHTLTL--GPPSQVVMQYADSGSHFVPREATKKAESSR 313


>gi|126090663 zinc finger homeodomain 4 [Homo sapiens]
          Length = 3571

 Score = 38.1 bits (87), Expect = 0.073
 Identities = 46/180 (25%), Positives = 76/180 (42%), Gaps = 15/180 (8%)

Query: 1485 PQCHSENEAKEKAALFALQQLGSLGMNFPLPSQVFANY----PSAVPPGTIPPAFPPPTA 1540
            P+ H + E K  +AL  L ++       P+  Q   N     P++   G   P F P  A
Sbjct: 3167 PEKHPKKEEKISSALSVLGKVVGETHVDPIQLQALQNAIAGDPASFIGGQFLPYFIPGFA 3226

Query: 1541 NIMPSSSHLFGSMPWGPSVPVPGKPFHHTLYSGTMP--MAGGIPGGVHNQFIPLQVTKKR 1598
            +    +  L G++  G   PV G       Y  TMP  +AG  PG +  Q+   Q   + 
Sbjct: 3227 SYF--TPQLPGTVQGGYFPPVCGMESLFP-YGPTMPQTLAGLSPGALLQQYQQYQQNLQE 3283

Query: 1599 VANKKNFENKEAQS----SQATPVQTSQPDSSNIVKVSPRESSSA--SLKSSPIAQPASS 1652
               K+  + +E Q     ++ + V++ QP +SN    +  + S+A  S K  P  +  S+
Sbjct: 3284 SLQKQQKQQQEQQQKPVQAKTSKVESDQPQNSNDASETKEDKSTATESTKEEPQLESKSA 3343


>gi|163965366 nascent polypeptide-associated complex alpha subunit
            isoform a [Homo sapiens]
          Length = 2078

 Score = 38.1 bits (87), Expect = 0.073
 Identities = 40/186 (21%), Positives = 72/186 (38%), Gaps = 27/186 (14%)

Query: 1523 PSAVPPGTIPPAFPPPTANIMPSSSHLFGSMPWGPSVPVP---------------GKPFH 1567
            P ++P    P    PP    +PSS  L    P  P  P                 G PF 
Sbjct: 1797 PVSLPLAPSPVPTLPPKQQFLPSSPGLVLESPSKPLAPADEDELLPLIPPEPISGGVPFQ 1856

Query: 1568 HTLYSGTMPMAGGIPGGVHNQFIPLQVTKKRVANKKNFENKEAQSSQATPVQTSQPDSSN 1627
              L +   P + GIP       +P    K+ V         E+ S ++ P +  + DS+ 
Sbjct: 1857 SVLVNMPTPKSAGIP-------VPTPSAKQPVTKNNKGSGTESDSDESVP-ELEEQDSTQ 1908

Query: 1628 IVKVSPRESSSASLKSSPIAQPASSFQVETASQGHS-ISHHKSTPISS-SRRKSRKLAVN 1685
                  + +++A +   P+++   S   + A +  S +   + T ++  + RKS+ +   
Sbjct: 1909 ATTQQAQLAAAAEIDEEPVSKAKQSRSEKKARKAMSKLGLRQVTGVTRVTIRKSKNIL-- 1966

Query: 1686 FGVSKP 1691
            F ++KP
Sbjct: 1967 FVITKP 1972


>gi|115387123 protocadherin 15 isoform CD1-4 precursor [Homo sapiens]
          Length = 1955

 Score = 37.7 bits (86), Expect = 0.095
 Identities = 32/128 (25%), Positives = 51/128 (39%), Gaps = 18/128 (14%)

Query: 1456 PQPDFSFLRMPQTMTVCQVKLSNGLLVHGPQC------------HSENEAKEKA-ALFAL 1502
            P+P FSF  +P      ++K    ++    +C            HS    +E    +  +
Sbjct: 1665 PRPHFSFSTLPTVSRTVELKSEPNVISSPAECSLELSPSRPCVLHSSLSRRETPICMLPI 1724

Query: 1503 QQLGSLGMNFPLPSQVFANY-PSAVPPGTIPPAFPPPTANIMP----SSSHLFGSMPWGP 1557
            +   ++  NF  P  +  +  P   PP   PP+ PP  A + P    S   LF   P  P
Sbjct: 1725 ETERNIFENFAHPPNISPSACPLPPPPPISPPSPPPAPAPLAPPPDISPFSLFCPPPSPP 1784

Query: 1558 SVPVPGKP 1565
            S+P+P  P
Sbjct: 1785 SIPLPLPP 1792


>gi|218505798 protocadherin 15 isoform CD1-10 precursor [Homo sapiens]
          Length = 1932

 Score = 37.7 bits (86), Expect = 0.095
 Identities = 32/128 (25%), Positives = 51/128 (39%), Gaps = 18/128 (14%)

Query: 1456 PQPDFSFLRMPQTMTVCQVKLSNGLLVHGPQC------------HSENEAKEKA-ALFAL 1502
            P+P FSF  +P      ++K    ++    +C            HS    +E    +  +
Sbjct: 1642 PRPHFSFSTLPTVSRTVELKSEPNVISSPAECSLELSPSRPCVLHSSLSRRETPICMLPI 1701

Query: 1503 QQLGSLGMNFPLPSQVFANY-PSAVPPGTIPPAFPPPTANIMP----SSSHLFGSMPWGP 1557
            +   ++  NF  P  +  +  P   PP   PP+ PP  A + P    S   LF   P  P
Sbjct: 1702 ETERNIFENFAHPPNISPSACPLPPPPPISPPSPPPAPAPLAPPPDISPFSLFCPPPSPP 1761

Query: 1558 SVPVPGKP 1565
            S+P+P  P
Sbjct: 1762 SIPLPLPP 1769


>gi|218505785 protocadherin 15 isoform CD1-9 precursor [Homo sapiens]
          Length = 1935

 Score = 37.7 bits (86), Expect = 0.095
 Identities = 32/128 (25%), Positives = 51/128 (39%), Gaps = 18/128 (14%)

Query: 1456 PQPDFSFLRMPQTMTVCQVKLSNGLLVHGPQC------------HSENEAKEKA-ALFAL 1502
            P+P FSF  +P      ++K    ++    +C            HS    +E    +  +
Sbjct: 1645 PRPHFSFSTLPTVSRTVELKSEPNVISSPAECSLELSPSRPCVLHSSLSRRETPICMLPI 1704

Query: 1503 QQLGSLGMNFPLPSQVFANY-PSAVPPGTIPPAFPPPTANIMP----SSSHLFGSMPWGP 1557
            +   ++  NF  P  +  +  P   PP   PP+ PP  A + P    S   LF   P  P
Sbjct: 1705 ETERNIFENFAHPPNISPSACPLPPPPPISPPSPPPAPAPLAPPPDISPFSLFCPPPSPP 1764

Query: 1558 SVPVPGKP 1565
            S+P+P  P
Sbjct: 1765 SIPLPLPP 1772


>gi|218505783 protocadherin 15 isoform CD1-8 precursor [Homo sapiens]
          Length = 1915

 Score = 37.7 bits (86), Expect = 0.095
 Identities = 32/128 (25%), Positives = 51/128 (39%), Gaps = 18/128 (14%)

Query: 1456 PQPDFSFLRMPQTMTVCQVKLSNGLLVHGPQC------------HSENEAKEKA-ALFAL 1502
            P+P FSF  +P      ++K    ++    +C            HS    +E    +  +
Sbjct: 1625 PRPHFSFSTLPTVSRTVELKSEPNVISSPAECSLELSPSRPCVLHSSLSRRETPICMLPI 1684

Query: 1503 QQLGSLGMNFPLPSQVFANY-PSAVPPGTIPPAFPPPTANIMP----SSSHLFGSMPWGP 1557
            +   ++  NF  P  +  +  P   PP   PP+ PP  A + P    S   LF   P  P
Sbjct: 1685 ETERNIFENFAHPPNISPSACPLPPPPPISPPSPPPAPAPLAPPPDISPFSLFCPPPSPP 1744

Query: 1558 SVPVPGKP 1565
            S+P+P  P
Sbjct: 1745 SIPLPLPP 1752


>gi|218505781 protocadherin 15 isoform CD1-7 precursor [Homo sapiens]
          Length = 1952

 Score = 37.7 bits (86), Expect = 0.095
 Identities = 32/128 (25%), Positives = 51/128 (39%), Gaps = 18/128 (14%)

Query: 1456 PQPDFSFLRMPQTMTVCQVKLSNGLLVHGPQC------------HSENEAKEKA-ALFAL 1502
            P+P FSF  +P      ++K    ++    +C            HS    +E    +  +
Sbjct: 1662 PRPHFSFSTLPTVSRTVELKSEPNVISSPAECSLELSPSRPCVLHSSLSRRETPICMLPI 1721

Query: 1503 QQLGSLGMNFPLPSQVFANY-PSAVPPGTIPPAFPPPTANIMP----SSSHLFGSMPWGP 1557
            +   ++  NF  P  +  +  P   PP   PP+ PP  A + P    S   LF   P  P
Sbjct: 1722 ETERNIFENFAHPPNISPSACPLPPPPPISPPSPPPAPAPLAPPPDISPFSLFCPPPSPP 1781

Query: 1558 SVPVPGKP 1565
            S+P+P  P
Sbjct: 1782 SIPLPLPP 1789


>gi|218505779 protocadherin 15 isoform CD1-6 precursor [Homo sapiens]
          Length = 1886

 Score = 37.7 bits (86), Expect = 0.095
 Identities = 32/128 (25%), Positives = 51/128 (39%), Gaps = 18/128 (14%)

Query: 1456 PQPDFSFLRMPQTMTVCQVKLSNGLLVHGPQC------------HSENEAKEKA-ALFAL 1502
            P+P FSF  +P      ++K    ++    +C            HS    +E    +  +
Sbjct: 1596 PRPHFSFSTLPTVSRTVELKSEPNVISSPAECSLELSPSRPCVLHSSLSRRETPICMLPI 1655

Query: 1503 QQLGSLGMNFPLPSQVFANY-PSAVPPGTIPPAFPPPTANIMP----SSSHLFGSMPWGP 1557
            +   ++  NF  P  +  +  P   PP   PP+ PP  A + P    S   LF   P  P
Sbjct: 1656 ETERNIFENFAHPPNISPSACPLPPPPPISPPSPPPAPAPLAPPPDISPFSLFCPPPSPP 1715

Query: 1558 SVPVPGKP 1565
            S+P+P  P
Sbjct: 1716 SIPLPLPP 1723


>gi|218505777 protocadherin 15 isoform CD1-2 precursor [Homo sapiens]
          Length = 1957

 Score = 37.7 bits (86), Expect = 0.095
 Identities = 32/128 (25%), Positives = 51/128 (39%), Gaps = 18/128 (14%)

Query: 1456 PQPDFSFLRMPQTMTVCQVKLSNGLLVHGPQC------------HSENEAKEKA-ALFAL 1502
            P+P FSF  +P      ++K    ++    +C            HS    +E    +  +
Sbjct: 1667 PRPHFSFSTLPTVSRTVELKSEPNVISSPAECSLELSPSRPCVLHSSLSRRETPICMLPI 1726

Query: 1503 QQLGSLGMNFPLPSQVFANY-PSAVPPGTIPPAFPPPTANIMP----SSSHLFGSMPWGP 1557
            +   ++  NF  P  +  +  P   PP   PP+ PP  A + P    S   LF   P  P
Sbjct: 1727 ETERNIFENFAHPPNISPSACPLPPPPPISPPSPPPAPAPLAPPPDISPFSLFCPPPSPP 1786

Query: 1558 SVPVPGKP 1565
            S+P+P  P
Sbjct: 1787 SIPLPLPP 1794


>gi|218505775 protocadherin 15 isoform CD1-1 precursor [Homo sapiens]
          Length = 1962

 Score = 37.7 bits (86), Expect = 0.095
 Identities = 32/128 (25%), Positives = 51/128 (39%), Gaps = 18/128 (14%)

Query: 1456 PQPDFSFLRMPQTMTVCQVKLSNGLLVHGPQC------------HSENEAKEKA-ALFAL 1502
            P+P FSF  +P      ++K    ++    +C            HS    +E    +  +
Sbjct: 1672 PRPHFSFSTLPTVSRTVELKSEPNVISSPAECSLELSPSRPCVLHSSLSRRETPICMLPI 1731

Query: 1503 QQLGSLGMNFPLPSQVFANY-PSAVPPGTIPPAFPPPTANIMP----SSSHLFGSMPWGP 1557
            +   ++  NF  P  +  +  P   PP   PP+ PP  A + P    S   LF   P  P
Sbjct: 1732 ETERNIFENFAHPPNISPSACPLPPPPPISPPSPPPAPAPLAPPPDISPFSLFCPPPSPP 1791

Query: 1558 SVPVPGKP 1565
            S+P+P  P
Sbjct: 1792 SIPLPLPP 1799


>gi|55750053 atrophin-1 [Homo sapiens]
          Length = 1190

 Score = 37.0 bits (84), Expect = 0.16
 Identities = 45/162 (27%), Positives = 64/162 (39%), Gaps = 23/162 (14%)

Query: 1521 NYPSAVPPGTIP---PAFPPPTANIMPSSSHLFGSMPWGPSVPVPGK-PFHHTLYSGTMP 1576
            N PSA PP   P   P  PPP A  +   ++   S P   + P+PG  P  H +  G   
Sbjct: 284  NLPSAPPPANFPHVTPNLPPPPA--LRPLNNASASPPGLGAQPLPGHLPSPHAMGQG--- 338

Query: 1577 MAGGIPGGVHNQFIPLQVTKKRVANKKNFENKEAQSSQATPVQTSQPDSSNIVKVSPRES 1636
              GG+P G              +A   +     + S+ A P++     SS+    +   S
Sbjct: 339  -MGGLPPGPEK--------GPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSS 389

Query: 1637 SSASLKSSPIAQPASSFQVETASQGHSISHHKSTPISSSRRK 1678
            SS+S  +SP   PAS       S  HS     S  +S+   K
Sbjct: 390  SSSSSSASPF--PASQ---ALPSYPHSFPPPTSLSVSNQPPK 426


>gi|55750041 atrophin-1 [Homo sapiens]
          Length = 1190

 Score = 37.0 bits (84), Expect = 0.16
 Identities = 45/162 (27%), Positives = 64/162 (39%), Gaps = 23/162 (14%)

Query: 1521 NYPSAVPPGTIP---PAFPPPTANIMPSSSHLFGSMPWGPSVPVPGK-PFHHTLYSGTMP 1576
            N PSA PP   P   P  PPP A  +   ++   S P   + P+PG  P  H +  G   
Sbjct: 284  NLPSAPPPANFPHVTPNLPPPPA--LRPLNNASASPPGLGAQPLPGHLPSPHAMGQG--- 338

Query: 1577 MAGGIPGGVHNQFIPLQVTKKRVANKKNFENKEAQSSQATPVQTSQPDSSNIVKVSPRES 1636
              GG+P G              +A   +     + S+ A P++     SS+    +   S
Sbjct: 339  -MGGLPPGPEK--------GPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSS 389

Query: 1637 SSASLKSSPIAQPASSFQVETASQGHSISHHKSTPISSSRRK 1678
            SS+S  +SP   PAS       S  HS     S  +S+   K
Sbjct: 390  SSSSSSASPF--PASQ---ALPSYPHSFPPPTSLSVSNQPPK 426


>gi|50428933 C1q domain containing 1 isoform 1 [Homo sapiens]
          Length = 1127

 Score = 36.2 bits (82), Expect = 0.28
 Identities = 84/372 (22%), Positives = 131/372 (35%), Gaps = 71/372 (19%)

Query: 1238 QSLQGSGKMQYFQPTIQEKGAVL-----PQEISQVNQHHKSGFNDNSVKYQ--------- 1283
            Q  Q + K++   P  Q+K  +      P +  Q     K+G+     K Q         
Sbjct: 441  QRKQDTSKLRSTLPEEQKKQEISKSKPSPSQWKQDTPKSKAGYVQEEQKKQETPKLWPVQ 500

Query: 1284 -QRKHDPHRKFKE------ECKSPKAECWSQKMSNKQPNSGIENFLASLNISKENEVQSS 1336
             Q++ DP ++  +      + +    + W+  M  +Q +   E        S EN V+S 
Sbjct: 501  LQKEQDPKKQTPKSWTPSMQSEQNTTKSWTTPMCEEQDSKQPET-----PKSWENNVESQ 555

Query: 1337 HHGEPPSEEHLSPQSFAMGTRMLKEILKIDGSNTVDHK--NEIKQIANEI--PVSSNRRD 1392
             H    S+  +SP+S+ + T  L     I     +  K   E K +   +  PV S+   
Sbjct: 556  KHSLT-SQSQISPKSWGVATASL-----IPNDQLLPRKLNTEPKDVPKPVHQPVGSSST- 608

Query: 1393 EYGLPSQPKQNK-KLASYMNKPHSANEY--HNVQSMDNMCWPAPSQIPPVSTPVTELSRI 1449
               LP  P   K KL   M +      +   +V   D      P+  PP +TP    S +
Sbjct: 609  ---LPKDPVLRKEKLQDLMTQIQGTCNFMQESVLDFDKPSSAIPTSQPPSATPG---SPV 662

Query: 1450 CSLVGMPQPDFSFLRMPQTMTVCQVKLS-NGLLVHGPQCHSENEAKEKAALFALQQLGSL 1508
             S          FL+ P   T   V  S N  LV   Q  S +E +              
Sbjct: 663  ASKEQNLSSQSDFLQEPLQATSSPVTCSSNACLVTTDQASSGSETEF------------- 709

Query: 1509 GMNFPLPSQVFANYPSAVPPGTIPPAFPPPTANIMPSSSHLFGSMP-WGPSVPVPGKPFH 1567
             M    P        +A+PPG  P +   P   +   S   F S P    SV +   PF 
Sbjct: 710  -MTSETPE-------AAIPPGKQPSSLASPNPPMAKGSEQGFQSPPASSSSVTINTAPFQ 761

Query: 1568 --HTLYSGTMPM 1577
               T+++   P+
Sbjct: 762  AMQTVFNVNAPL 773


>gi|50428931 C1q domain containing 1 isoform 3 [Homo sapiens]
          Length = 793

 Score = 36.2 bits (82), Expect = 0.28
 Identities = 84/372 (22%), Positives = 131/372 (35%), Gaps = 71/372 (19%)

Query: 1238 QSLQGSGKMQYFQPTIQEKGAVL-----PQEISQVNQHHKSGFNDNSVKYQ--------- 1283
            Q  Q + K++   P  Q+K  +      P +  Q     K+G+     K Q         
Sbjct: 108  QRKQDTSKLRSTLPEEQKKQEISKSKPSPSQWKQDTPKSKAGYVQEEQKKQETPKLWPVQ 167

Query: 1284 -QRKHDPHRKFKE------ECKSPKAECWSQKMSNKQPNSGIENFLASLNISKENEVQSS 1336
             Q++ DP ++  +      + +    + W+  M  +Q +   E        S EN V+S 
Sbjct: 168  LQKEQDPKKQTPKSWTPSMQSEQNTTKSWTTPMCEEQDSKQPET-----PKSWENNVESQ 222

Query: 1337 HHGEPPSEEHLSPQSFAMGTRMLKEILKIDGSNTVDHK--NEIKQIANEI--PVSSNRRD 1392
             H    S+  +SP+S+ + T  L     I     +  K   E K +   +  PV S+   
Sbjct: 223  KHSLT-SQSQISPKSWGVATASL-----IPNDQLLPRKLNTEPKDVPKPVHQPVGSSST- 275

Query: 1393 EYGLPSQPKQNK-KLASYMNKPHSANEY--HNVQSMDNMCWPAPSQIPPVSTPVTELSRI 1449
               LP  P   K KL   M +      +   +V   D      P+  PP +TP    S +
Sbjct: 276  ---LPKDPVLRKEKLQDLMTQIQGTCNFMQESVLDFDKPSSAIPTSQPPSATPG---SPV 329

Query: 1450 CSLVGMPQPDFSFLRMPQTMTVCQVKLS-NGLLVHGPQCHSENEAKEKAALFALQQLGSL 1508
             S          FL+ P   T   V  S N  LV   Q  S +E +              
Sbjct: 330  ASKEQNLSSQSDFLQEPLQATSSPVTCSSNACLVTTDQASSGSETEF------------- 376

Query: 1509 GMNFPLPSQVFANYPSAVPPGTIPPAFPPPTANIMPSSSHLFGSMP-WGPSVPVPGKPFH 1567
             M    P        +A+PPG  P +   P   +   S   F S P    SV +   PF 
Sbjct: 377  -MTSETPE-------AAIPPGKQPSSLASPNPPMAKGSEQGFQSPPASSSSVTINTAPFQ 428

Query: 1568 --HTLYSGTMPM 1577
               T+++   P+
Sbjct: 429  AMQTVFNVNAPL 440


>gi|195963431 transmembrane protein 201 isoform 1 [Homo sapiens]
          Length = 642

 Score = 36.2 bits (82), Expect = 0.28
 Identities = 36/135 (26%), Positives = 53/135 (39%), Gaps = 21/135 (15%)

Query: 1551 GSMPWGPSVPVPGKPFHHTLYSGTMPMAGGIPGGVHNQFIPLQVTKKRVANKKNFENKEA 1610
            G  P  PS+ +P             P  GG P  +   FIP   +   +AN++ F +   
Sbjct: 395  GLFPTSPSLAIPH------------PSVGGSPASL---FIPSPPSFLPLANQQLFRSPRR 439

Query: 1611 QSSQATPVQTSQPDSSNIVKVSPRESS----SASLKSSPIAQPASSFQVETASQGHSISH 1666
             S  + P + S+  S   +    R       S S  SSP+  PA S     AS   S+ H
Sbjct: 440  TSPSSLPGRLSRALSLGTIPSLTRADYFSLLSGSCPSSPLPSPAPSVAGSVASSSGSLRH 499

Query: 1667 HKSTPISSSRRKSRK 1681
             +  P+ S  R + K
Sbjct: 500  RR--PLISPARLNLK 512


>gi|91208418 transcription elongation regulator 1 isoform 2 [Homo
            sapiens]
          Length = 1077

 Score = 36.2 bits (82), Expect = 0.28
 Identities = 35/146 (23%), Positives = 55/146 (37%), Gaps = 18/146 (12%)

Query: 1521 NYPSAVPPGTIPPAFPPPTANIMPSSSHLFGSMPWGPSVPVPGKPFHHTLYSGTMPMAGG 1580
            N P   PPG IPP   PP     P       SMP     P PG  F   +   T P    
Sbjct: 75   NMPPMPPPGGIPPPMGPPHLQRPPFMPPPMSSMP-----PPPGMMFPPGMPPVTAPGTPA 129

Query: 1581 IPGGVHNQFIPLQVTKKRVANKKNFENKEAQSSQATPVQTSQPDSSNIV---KVSPRESS 1637
            +P         + V  K    K  + N   + S  T     +PD   ++   +++P  ++
Sbjct: 130  LPPTEE-----IWVENKTPDGKVYYYNARTRESAWT-----KPDGVKVIQQSELTPMLAA 179

Query: 1638 SASLKSSPIAQPASSFQVETASQGHS 1663
             A +++   AQ  +  Q +  +Q  +
Sbjct: 180  QAQVQAQAQAQAQAQAQAQAQAQAQA 205


>gi|21327715 transcription elongation regulator 1 isoform 1 [Homo
            sapiens]
          Length = 1098

 Score = 36.2 bits (82), Expect = 0.28
 Identities = 35/146 (23%), Positives = 55/146 (37%), Gaps = 18/146 (12%)

Query: 1521 NYPSAVPPGTIPPAFPPPTANIMPSSSHLFGSMPWGPSVPVPGKPFHHTLYSGTMPMAGG 1580
            N P   PPG IPP   PP     P       SMP     P PG  F   +   T P    
Sbjct: 75   NMPPMPPPGGIPPPMGPPHLQRPPFMPPPMSSMP-----PPPGMMFPPGMPPVTAPGTPA 129

Query: 1581 IPGGVHNQFIPLQVTKKRVANKKNFENKEAQSSQATPVQTSQPDSSNIV---KVSPRESS 1637
            +P         + V  K    K  + N   + S  T     +PD   ++   +++P  ++
Sbjct: 130  LPPTEE-----IWVENKTPDGKVYYYNARTRESAWT-----KPDGVKVIQQSELTPMLAA 179

Query: 1638 SASLKSSPIAQPASSFQVETASQGHS 1663
             A +++   AQ  +  Q +  +Q  +
Sbjct: 180  QAQVQAQAQAQAQAQAQAQAQAQAQA 205


>gi|73808090 zinc finger protein 207 isoform b [Homo sapiens]
          Length = 463

 Score = 36.2 bits (82), Expect = 0.28
 Identities = 37/176 (21%), Positives = 60/176 (34%), Gaps = 26/176 (14%)

Query: 1523 PSAVPPGTIPPAFPPPTANIMPSSSHLFGSMPWGPS-VPVPGKPFHHTLYSGTMPMAGGI 1581
            P  +PP    P  PP T     S+  +    P   + VP P  P    L+         +
Sbjct: 222  PPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQAQAAV 281

Query: 1582 PGGVHNQFIPLQVTKKRVANKKNFENKEAQSSQATPVQTSQPDSSNIVKVSPRESSSASL 1641
             G V   F PL                      +TP  T++P        +   +S+ S 
Sbjct: 282  QGPVGTDFKPLN---------------------STPATTTEPPKPTFPAYTQSTASTTST 320

Query: 1642 KSSPIAQPASSFQVE----TASQGHSISHHKSTPISSSRRKSRKLAVNFGVSKPSE 1693
             +S  A+PA+S   +    T +   S   H    IS   R+++       + +P +
Sbjct: 321  TNSTAAKPAASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQ 376


>gi|15812180 butyrate response factor 1 [Homo sapiens]
          Length = 338

 Score = 35.8 bits (81), Expect = 0.36
 Identities = 36/130 (27%), Positives = 55/130 (42%), Gaps = 10/130 (7%)

Query: 1461 SFLRMPQTMT-VCQVKLSNGLLVHGPQCHSENEAKEKAALFALQQLGSLGMNFPLPSQVF 1519
            S  R P+  T +C+   + G   +GP+CH  + A+E+ AL   + L +        S  F
Sbjct: 146  SLTRHPKYKTELCRTFHTIGFCPYGPRCHFIHNAEERRALAGARDLSADRPRLQ-HSFSF 204

Query: 1520 ANYPSAVPPGTIPPAFPPPTANIMP---SSSHLFGS--MPWGPSVPVPGKPFHHTLYSGT 1574
            A +PSA            PT+   P   S+  L GS  +P G + P     F     +  
Sbjct: 205  AGFPSAAATAAATGLLDSPTSITPPPILSADDLLGSPTLPDGTNNPF---AFSSQELASL 261

Query: 1575 MPMAGGIPGG 1584
               + G+PGG
Sbjct: 262  FAPSMGLPGG 271


>gi|119943102 CREB binding protein isoform b [Homo sapiens]
          Length = 2404

 Score = 35.8 bits (81), Expect = 0.36
 Identities = 72/314 (22%), Positives = 107/314 (34%), Gaps = 59/314 (18%)

Query: 1384 IPVSSNRRDEYGLPSQPKQNKKLASYMNKPHSANEYHNVQSMDNMCWPAPSQIPPVSTPV 1443
            IP +   R   G  S P    +++  MN         N  S+ N+  P     P  ++P+
Sbjct: 657  IPQAQPVRPPNGPLSLPVNRMQVSQGMNS-------FNPMSLGNVQLPQAPMGPRAASPM 709

Query: 1444 TELSRICSLVGMPQPDFSFLRMPQTMTVCQVKLSNGLLVHGP---------QCHSENEAK 1494
                ++ S+  +P    S  RMPQ   +     +N ++   P         Q  S + A 
Sbjct: 710  NHSVQMNSMGSVPGMAISPSRMPQPPNMMGAH-TNNMMAQAPAQSQFLPQNQFPSSSGAM 768

Query: 1495 -----EKAALFALQQLGSLGMNFPLPSQVFANYPSAVP--PGTIPPAFPPP----TANIM 1543
                 +  A   + Q    G   P P  +     S +P  P T  P  P P    TA  M
Sbjct: 769  SVGMGQPPAQTGVSQGQVPGAALPNPLNMLGPQASQLPCPPVTQSPLHPTPPPASTAAGM 828

Query: 1544 PSSSHLFG--------SMPWGPSVPVPGKPFHHTLYSGTMPMAGGIPGGVHNQFIP---- 1591
            PS  H           + P  PS PV       T      P  G +P     Q  P    
Sbjct: 829  PSLQHTTPPGMTPPQPAAPTQPSTPVSSSGQTPT------PTPGSVPSATQTQSTPTVQA 882

Query: 1592 ---LQVT--KKRVANKKNFENKEAQSSQATPVQTSQPDSSNIVKVSPRESSSASLKSSPI 1646
                QVT   +      +    ++   Q TPV    P        +P   ++AS+  + +
Sbjct: 883  AAQAQVTPQPQTPVQPPSVATPQSSQQQPTPVHAQPPG-------TPLSQAAASI-DNRV 934

Query: 1647 AQPASSFQVETASQ 1660
              P+S    ET SQ
Sbjct: 935  PTPSSVASAETNSQ 948


>gi|119943104 CREB binding protein isoform a [Homo sapiens]
          Length = 2442

 Score = 35.8 bits (81), Expect = 0.36
 Identities = 72/314 (22%), Positives = 107/314 (34%), Gaps = 59/314 (18%)

Query: 1384 IPVSSNRRDEYGLPSQPKQNKKLASYMNKPHSANEYHNVQSMDNMCWPAPSQIPPVSTPV 1443
            IP +   R   G  S P    +++  MN         N  S+ N+  P     P  ++P+
Sbjct: 695  IPQAQPVRPPNGPLSLPVNRMQVSQGMNS-------FNPMSLGNVQLPQAPMGPRAASPM 747

Query: 1444 TELSRICSLVGMPQPDFSFLRMPQTMTVCQVKLSNGLLVHGP---------QCHSENEAK 1494
                ++ S+  +P    S  RMPQ   +     +N ++   P         Q  S + A 
Sbjct: 748  NHSVQMNSMGSVPGMAISPSRMPQPPNMMGAH-TNNMMAQAPAQSQFLPQNQFPSSSGAM 806

Query: 1495 -----EKAALFALQQLGSLGMNFPLPSQVFANYPSAVP--PGTIPPAFPPP----TANIM 1543
                 +  A   + Q    G   P P  +     S +P  P T  P  P P    TA  M
Sbjct: 807  SVGMGQPPAQTGVSQGQVPGAALPNPLNMLGPQASQLPCPPVTQSPLHPTPPPASTAAGM 866

Query: 1544 PSSSHLFG--------SMPWGPSVPVPGKPFHHTLYSGTMPMAGGIPGGVHNQFIP---- 1591
            PS  H           + P  PS PV       T      P  G +P     Q  P    
Sbjct: 867  PSLQHTTPPGMTPPQPAAPTQPSTPVSSSGQTPT------PTPGSVPSATQTQSTPTVQA 920

Query: 1592 ---LQVT--KKRVANKKNFENKEAQSSQATPVQTSQPDSSNIVKVSPRESSSASLKSSPI 1646
                QVT   +      +    ++   Q TPV    P        +P   ++AS+  + +
Sbjct: 921  AAQAQVTPQPQTPVQPPSVATPQSSQQQPTPVHAQPPG-------TPLSQAAASI-DNRV 972

Query: 1647 AQPASSFQVETASQ 1660
              P+S    ET SQ
Sbjct: 973  PTPSSVASAETNSQ 986


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.134    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,605,007
Number of Sequences: 37866
Number of extensions: 3448622
Number of successful extensions: 12294
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 134
Number of HSP's that attempted gapping in prelim test: 11861
Number of HSP's gapped (non-prelim): 589
length of query: 1693
length of database: 18,247,518
effective HSP length: 116
effective length of query: 1577
effective length of database: 13,855,062
effective search space: 21849432774
effective search space used: 21849432774
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 69 (31.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.