Guide to the Human Genome
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Name: TMEM201 Sequence: fasta or formatted (642aa) NCBI GI: 195963431
Description:

transmembrane protein 201 isoform 1

Not currently referenced in the text

Other entries for this name:
alt prot {392aa} transmembrane protein 201 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.0         64           3
 C cysteine            3.4         22           2
 D aspartate           2.6         17           2
 E glutamate           3.7         24           2
 F phenylalanine       3.9         25           2
 G glycine             6.9         44           2
 H histidine           3.4         22           2
 I isoleucine          1.9         12           1
 K lysine              3.0         19           2
 L leucine            13.2         85           3
 M methionine          1.1          7           1
 N asparagine          2.8         18           1
 P proline             8.6         55           2
 Q glutamine           4.5         29           2
 R arginine            7.2         46           2
 S serine             10.1         65           3
 T threonine           5.8         37           3
 V valine              4.7         30           2
 W tryptophan          1.2          8           1
 Y tyrosine            2.0         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane protein 201 isoform 1 
TMEM201               0.607   transmembrane protein 201 isoform 2 
POLR2A                0.017   DNA-directed RNA polymerase II A 
LOC100134663          0.016   PREDICTED: hypothetical protein, partial 
HCN4                  0.015   hyperpolarization activated cyclic nucleotide-gated p...
C10orf95              0.015   hypothetical protein LOC79946 
PRDM2                 0.013   retinoblastoma protein-binding zinc finger protein i...
PRDM2                 0.013   retinoblastoma protein-binding zinc finger protein i...
PRDM2                 0.013   retinoblastoma protein-binding zinc finger protein i...
ZNF828                0.012   zinc finger protein 828 
SETD1B                0.012   SET domain containing 1B 
NACAD                 0.012   NAC alpha domain containing 
MUC16                 0.012   mucin 16 
NACAD                 0.012   PREDICTED: NAC alpha domain containing 
NACAD                 0.012   PREDICTED: NAC alpha domain containing 
NACAD                 0.012   PREDICTED: NAC alpha domain containing 
NACAD                 0.012   PREDICTED: NAC alpha domain containing 
FLJ22184              0.012   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.012   PREDICTED: hypothetical protein LOC80164 
AGRN                  0.012   agrin 
FLJ22184              0.012   PREDICTED: hypothetical protein FLJ22184 
COL27A1               0.012   collagen, type XXVII, alpha 1 
GLTSCR1               0.012   glioma tumor suppressor candidate region gene 1 [Ho...
BSN                   0.012   bassoon protein 
SRCAP                 0.012   Snf2-related CBP activator protein 
NACA                  0.012   nascent polypeptide-associated complex alpha subuni...
SRRM2                 0.011   splicing coactivator subunit SRm300 
DENND4B               0.011   DENN/MADD domain containing 4B 
CRAMP1L               0.011   Crm, cramped-like 
C6orf132              0.011   PREDICTED: chromosome 6 open reading frame 132 [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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