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Search of human proteins with 165905591
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|165905591 LIM domain and actin binding 1 isoform c [Homo
sapiens]
(600 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|165905591 LIM domain and actin binding 1 isoform c [Homo sapi... 1202 0.0
gi|165905589 LIM domain and actin binding 1 isoform a [Homo sapi... 1202 0.0
gi|7705373 LIM domain and actin binding 1 isoform b [Homo sapiens] 1192 0.0
gi|119372315 xin actin-binding repeat containing 2 isoform 2 [Ho... 210 3e-54
gi|13386490 LIM domain containing 2 [Homo sapiens] 141 2e-33
gi|209862793 microtubule associated monoxygenase, calponin and L... 71 3e-12
gi|170172518 microtubule associated monoxygenase, calponin and L... 65 1e-10
gi|209862789 microtubule associated monoxygenase, calponin and L... 65 1e-10
gi|7662284 microtubule associated monoxygenase, calponin and LIM... 65 2e-10
gi|33667117 MICAL-like 2 isoform 1 [Homo sapiens] 60 6e-09
gi|189083753 cysteine and glycine-rich protein 3 [Homo sapiens] 54 3e-07
gi|4502893 cysteine and glycine-rich protein 3 [Homo sapiens] 54 3e-07
gi|4758086 cysteine and glycine-rich protein 1 isoform 1 [Homo s... 54 5e-07
gi|31324577 molecule interacting with Rab13 [Homo sapiens] 53 7e-07
gi|4503101 cysteine and glycine-rich protein 2 [Homo sapiens] 53 7e-07
gi|4503049 cysteine-rich protein 2 [Homo sapiens] 52 1e-06
gi|66932986 filamin-binding LIM protein-1 isoform b [Homo sapiens] 52 2e-06
gi|66932982 filamin-binding LIM protein-1 isoform a [Homo sapiens] 52 2e-06
gi|40804748 LIM and senescent cell antigen-like domains 2 isofor... 51 3e-06
gi|205360947 microtubule associated monoxygenase, calponin and L... 50 5e-06
gi|226530313 microtubule associated monoxygenase, calponin and L... 50 5e-06
gi|221316627 cysteine and glycine-rich protein 1 isoform 2 [Homo... 50 8e-06
gi|116517305 cysteine-rich protein 3 [Homo sapiens] 49 2e-05
gi|5453710 LIM and SH3 protein 1 [Homo sapiens] 47 5e-05
gi|47087157 nebulette non-muscle isoform [Homo sapiens] 47 5e-05
gi|239741720 PREDICTED: hypothetical protein XP_002342298 [Homo ... 47 7e-05
gi|238859658 LIM and senescent cell antigen-like domains 2 isofo... 46 9e-05
gi|238776788 LIM and senescent cell antigen-like domains 2 isofo... 46 9e-05
gi|238776786 LIM and senescent cell antigen-like domains 2 isofo... 46 9e-05
gi|46049092 nebulin-related anchoring protein isoform C [Homo sa... 46 9e-05
>gi|165905591 LIM domain and actin binding 1 isoform c [Homo
sapiens]
Length = 600
Score = 1202 bits (3111), Expect = 0.0
Identities = 600/600 (100%), Positives = 600/600 (100%)
Query: 1 MENCLGESRHEVEKSEISENTDASGKIEKYNVPLNRLKMMFEKGEPTQTKILRAQSRSAS 60
MENCLGESRHEVEKSEISENTDASGKIEKYNVPLNRLKMMFEKGEPTQTKILRAQSRSAS
Sbjct: 1 MENCLGESRHEVEKSEISENTDASGKIEKYNVPLNRLKMMFEKGEPTQTKILRAQSRSAS 60
Query: 61 GRKISENSYSLDDLEIGPGQLSSSTFDSEKNESRRNLELPRLSETSIKDRMAKYQAAVSK 120
GRKISENSYSLDDLEIGPGQLSSSTFDSEKNESRRNLELPRLSETSIKDRMAKYQAAVSK
Sbjct: 61 GRKISENSYSLDDLEIGPGQLSSSTFDSEKNESRRNLELPRLSETSIKDRMAKYQAAVSK 120
Query: 121 QSSSTNYTNELKASGGEIKIHKMEQKENVPPGPEVCITHQEGEKISANENSLAVRSTPAE 180
QSSSTNYTNELKASGGEIKIHKMEQKENVPPGPEVCITHQEGEKISANENSLAVRSTPAE
Sbjct: 121 QSSSTNYTNELKASGGEIKIHKMEQKENVPPGPEVCITHQEGEKISANENSLAVRSTPAE 180
Query: 181 DDSPGDSQVKSEVQQPVHPKPLSPDSRASSLSESSPPKAMKKFQAPARETCVECQKTVYP 240
DDSPGDSQVKSEVQQPVHPKPLSPDSRASSLSESSPPKAMKKFQAPARETCVECQKTVYP
Sbjct: 181 DDSPGDSQVKSEVQQPVHPKPLSPDSRASSLSESSPPKAMKKFQAPARETCVECQKTVYP 240
Query: 241 MERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSKGNYDEGFGHR 300
MERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSKGNYDEGFGHR
Sbjct: 241 MERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSKGNYDEGFGHR 300
Query: 301 PHKDLWASKNENEEILERPAQLANARETPHSPGVEDAPIAKVGVLAASMEAKASSQQEKE 360
PHKDLWASKNENEEILERPAQLANARETPHSPGVEDAPIAKVGVLAASMEAKASSQQEKE
Sbjct: 301 PHKDLWASKNENEEILERPAQLANARETPHSPGVEDAPIAKVGVLAASMEAKASSQQEKE 360
Query: 361 DKPAETKKLRIAWPPPTELGSSGSALEEGIKMSKPKWPPEDEISKPEVPEDVDLDLKKLR 420
DKPAETKKLRIAWPPPTELGSSGSALEEGIKMSKPKWPPEDEISKPEVPEDVDLDLKKLR
Sbjct: 361 DKPAETKKLRIAWPPPTELGSSGSALEEGIKMSKPKWPPEDEISKPEVPEDVDLDLKKLR 420
Query: 421 RSSSLKERSRPFTVAASFQSTSVKSPKTVSPPIRKGWSMSEQSEESVGGRVAERKQVENA 480
RSSSLKERSRPFTVAASFQSTSVKSPKTVSPPIRKGWSMSEQSEESVGGRVAERKQVENA
Sbjct: 421 RSSSLKERSRPFTVAASFQSTSVKSPKTVSPPIRKGWSMSEQSEESVGGRVAERKQVENA 480
Query: 481 KASKKNGNVGKTTWQNKESKGETGKRSKEGHSLEMENENLVENGADSDEDDNSFLKQQSP 540
KASKKNGNVGKTTWQNKESKGETGKRSKEGHSLEMENENLVENGADSDEDDNSFLKQQSP
Sbjct: 481 KASKKNGNVGKTTWQNKESKGETGKRSKEGHSLEMENENLVENGADSDEDDNSFLKQQSP 540
Query: 541 QEPKSLNWSSFVDNTFAEEFTTQNQKSQDVELWEGEVVKELSVEEQIKRNRYYDEDEDEE 600
QEPKSLNWSSFVDNTFAEEFTTQNQKSQDVELWEGEVVKELSVEEQIKRNRYYDEDEDEE
Sbjct: 541 QEPKSLNWSSFVDNTFAEEFTTQNQKSQDVELWEGEVVKELSVEEQIKRNRYYDEDEDEE 600
>gi|165905589 LIM domain and actin binding 1 isoform a [Homo
sapiens]
Length = 760
Score = 1202 bits (3111), Expect = 0.0
Identities = 600/600 (100%), Positives = 600/600 (100%)
Query: 1 MENCLGESRHEVEKSEISENTDASGKIEKYNVPLNRLKMMFEKGEPTQTKILRAQSRSAS 60
MENCLGESRHEVEKSEISENTDASGKIEKYNVPLNRLKMMFEKGEPTQTKILRAQSRSAS
Sbjct: 161 MENCLGESRHEVEKSEISENTDASGKIEKYNVPLNRLKMMFEKGEPTQTKILRAQSRSAS 220
Query: 61 GRKISENSYSLDDLEIGPGQLSSSTFDSEKNESRRNLELPRLSETSIKDRMAKYQAAVSK 120
GRKISENSYSLDDLEIGPGQLSSSTFDSEKNESRRNLELPRLSETSIKDRMAKYQAAVSK
Sbjct: 221 GRKISENSYSLDDLEIGPGQLSSSTFDSEKNESRRNLELPRLSETSIKDRMAKYQAAVSK 280
Query: 121 QSSSTNYTNELKASGGEIKIHKMEQKENVPPGPEVCITHQEGEKISANENSLAVRSTPAE 180
QSSSTNYTNELKASGGEIKIHKMEQKENVPPGPEVCITHQEGEKISANENSLAVRSTPAE
Sbjct: 281 QSSSTNYTNELKASGGEIKIHKMEQKENVPPGPEVCITHQEGEKISANENSLAVRSTPAE 340
Query: 181 DDSPGDSQVKSEVQQPVHPKPLSPDSRASSLSESSPPKAMKKFQAPARETCVECQKTVYP 240
DDSPGDSQVKSEVQQPVHPKPLSPDSRASSLSESSPPKAMKKFQAPARETCVECQKTVYP
Sbjct: 341 DDSPGDSQVKSEVQQPVHPKPLSPDSRASSLSESSPPKAMKKFQAPARETCVECQKTVYP 400
Query: 241 MERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSKGNYDEGFGHR 300
MERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSKGNYDEGFGHR
Sbjct: 401 MERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSKGNYDEGFGHR 460
Query: 301 PHKDLWASKNENEEILERPAQLANARETPHSPGVEDAPIAKVGVLAASMEAKASSQQEKE 360
PHKDLWASKNENEEILERPAQLANARETPHSPGVEDAPIAKVGVLAASMEAKASSQQEKE
Sbjct: 461 PHKDLWASKNENEEILERPAQLANARETPHSPGVEDAPIAKVGVLAASMEAKASSQQEKE 520
Query: 361 DKPAETKKLRIAWPPPTELGSSGSALEEGIKMSKPKWPPEDEISKPEVPEDVDLDLKKLR 420
DKPAETKKLRIAWPPPTELGSSGSALEEGIKMSKPKWPPEDEISKPEVPEDVDLDLKKLR
Sbjct: 521 DKPAETKKLRIAWPPPTELGSSGSALEEGIKMSKPKWPPEDEISKPEVPEDVDLDLKKLR 580
Query: 421 RSSSLKERSRPFTVAASFQSTSVKSPKTVSPPIRKGWSMSEQSEESVGGRVAERKQVENA 480
RSSSLKERSRPFTVAASFQSTSVKSPKTVSPPIRKGWSMSEQSEESVGGRVAERKQVENA
Sbjct: 581 RSSSLKERSRPFTVAASFQSTSVKSPKTVSPPIRKGWSMSEQSEESVGGRVAERKQVENA 640
Query: 481 KASKKNGNVGKTTWQNKESKGETGKRSKEGHSLEMENENLVENGADSDEDDNSFLKQQSP 540
KASKKNGNVGKTTWQNKESKGETGKRSKEGHSLEMENENLVENGADSDEDDNSFLKQQSP
Sbjct: 641 KASKKNGNVGKTTWQNKESKGETGKRSKEGHSLEMENENLVENGADSDEDDNSFLKQQSP 700
Query: 541 QEPKSLNWSSFVDNTFAEEFTTQNQKSQDVELWEGEVVKELSVEEQIKRNRYYDEDEDEE 600
QEPKSLNWSSFVDNTFAEEFTTQNQKSQDVELWEGEVVKELSVEEQIKRNRYYDEDEDEE
Sbjct: 701 QEPKSLNWSSFVDNTFAEEFTTQNQKSQDVELWEGEVVKELSVEEQIKRNRYYDEDEDEE 760
>gi|7705373 LIM domain and actin binding 1 isoform b [Homo sapiens]
Length = 759
Score = 1192 bits (3084), Expect = 0.0
Identities = 598/600 (99%), Positives = 598/600 (99%), Gaps = 1/600 (0%)
Query: 1 MENCLGESRHEVEKSEISENTDASGKIEKYNVPLNRLKMMFEKGEPTQTKILRAQSRSAS 60
MENCLGESRHEVEKSEISENTDASGKIEKYNVPLNRLKMMFEKGEPTQTKILRAQSRSAS
Sbjct: 161 MENCLGESRHEVEKSEISENTDASGKIEKYNVPLNRLKMMFEKGEPTQTKILRAQSRSAS 220
Query: 61 GRKISENSYSLDDLEIGPGQLSSSTFDSEKNESRRNLELPRLSETSIKDRMAKYQAAVSK 120
GRKISENSYSLDDLEIGPGQLSSSTFDSEKNESRRNLELPRLSETSIKDRMAKYQAAVSK
Sbjct: 221 GRKISENSYSLDDLEIGPGQLSSSTFDSEKNESRRNLELPRLSETSIKDRMAKYQAAVSK 280
Query: 121 QSSSTNYTNELKASGGEIKIHKMEQKENVPPGPEVCITHQEGEKISANENSLAVRSTPAE 180
QSSSTNYTNELKASGGEIKIHKMEQKENVPPGPEVCITHQEGEKISANENSLAVRSTPAE
Sbjct: 281 QSSSTNYTNELKASGGEIKIHKMEQKENVPPGPEVCITHQEGEKISANENSLAVRSTPAE 340
Query: 181 DDSPGDSQVKSEVQQPVHPKPLSPDSRASSLSESSPPKAMKKFQAPARETCVECQKTVYP 240
DDS DSQVKSEVQQPVHPKPLSPDSRASSLSESSPPKAMKKFQAPARETCVECQKTVYP
Sbjct: 341 DDSR-DSQVKSEVQQPVHPKPLSPDSRASSLSESSPPKAMKKFQAPARETCVECQKTVYP 399
Query: 241 MERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSKGNYDEGFGHR 300
MERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSKGNYDEGFGHR
Sbjct: 400 MERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSKGNYDEGFGHR 459
Query: 301 PHKDLWASKNENEEILERPAQLANARETPHSPGVEDAPIAKVGVLAASMEAKASSQQEKE 360
PHKDLWASKNENEEILERPAQLANARETPHSPGVEDAPIAKVGVLAASMEAKASSQQEKE
Sbjct: 460 PHKDLWASKNENEEILERPAQLANARETPHSPGVEDAPIAKVGVLAASMEAKASSQQEKE 519
Query: 361 DKPAETKKLRIAWPPPTELGSSGSALEEGIKMSKPKWPPEDEISKPEVPEDVDLDLKKLR 420
DKPAETKKLRIAWPPPTELGSSGSALEEGIKMSKPKWPPEDEISKPEVPEDVDLDLKKLR
Sbjct: 520 DKPAETKKLRIAWPPPTELGSSGSALEEGIKMSKPKWPPEDEISKPEVPEDVDLDLKKLR 579
Query: 421 RSSSLKERSRPFTVAASFQSTSVKSPKTVSPPIRKGWSMSEQSEESVGGRVAERKQVENA 480
RSSSLKERSRPFTVAASFQSTSVKSPKTVSPPIRKGWSMSEQSEESVGGRVAERKQVENA
Sbjct: 580 RSSSLKERSRPFTVAASFQSTSVKSPKTVSPPIRKGWSMSEQSEESVGGRVAERKQVENA 639
Query: 481 KASKKNGNVGKTTWQNKESKGETGKRSKEGHSLEMENENLVENGADSDEDDNSFLKQQSP 540
KASKKNGNVGKTTWQNKESKGETGKRSKEGHSLEMENENLVENGADSDEDDNSFLKQQSP
Sbjct: 640 KASKKNGNVGKTTWQNKESKGETGKRSKEGHSLEMENENLVENGADSDEDDNSFLKQQSP 699
Query: 541 QEPKSLNWSSFVDNTFAEEFTTQNQKSQDVELWEGEVVKELSVEEQIKRNRYYDEDEDEE 600
QEPKSLNWSSFVDNTFAEEFTTQNQKSQDVELWEGEVVKELSVEEQIKRNRYYDEDEDEE
Sbjct: 700 QEPKSLNWSSFVDNTFAEEFTTQNQKSQDVELWEGEVVKELSVEEQIKRNRYYDEDEDEE 759
>gi|119372315 xin actin-binding repeat containing 2 isoform 2 [Homo
sapiens]
Length = 938
Score = 210 bits (534), Expect = 3e-54
Identities = 168/551 (30%), Positives = 242/551 (43%), Gaps = 114/551 (20%)
Query: 60 SGRKISENSYSLDDLEIGPGQLSSSTFDSEKNES-------RRNLELPRLSET-SIKDRM 111
S +K E S+ E G ++ +T K ES R + L E S+K+RM
Sbjct: 164 SDKKGKETSFDKMSPESGHSRIFEATAGPNKPESGFAEDSAARGEGVSDLHEVVSLKERM 223
Query: 112 AKYQAAVSK---QSSSTNYTNELK---ASGGEIKIHKMEQKENVPP-------------- 151
A+YQAAVS+ +S S N E + GG K+ K + E
Sbjct: 224 ARYQAAVSRGDCRSFSANMMEESEMCAVPGGLAKVKKQFEDEITSSRNTFAQYQYQHQNR 283
Query: 152 ----------------GPEVCITHQEGEKIS-------------------ANENSL---- 172
E+ QEG K+ N+ S
Sbjct: 284 SEQEAIHSSQVGTSRSSQEMARNEQEGSKVQKIDVHGTEMVSHLEKHTEEVNQASQFHQY 343
Query: 173 ---AVRSTPAEDDSPGDSQ--VKSEVQQPVHPKPLSPDSRASSLSESSPPKAMKKFQAPA 227
V TP +++ P S +K + ++ K L D ++ P K +KK
Sbjct: 344 VQETVIDTPEDEEIPKVSTKLLKEQFEKSAQEKILYSDKEMTT-----PAKQIKKLLLQD 398
Query: 228 RETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLF 287
+E C+ CQKTVYPME L+A++Q FH SCFRC +CN+KLSLG YASLHG+IYCKPHF QLF
Sbjct: 399 KEICILCQKTVYPMECLVADKQNFHKSCFRCHHCNSKLSLGNYASLHGQIYCKPHFKQLF 458
Query: 288 KSKGNYDEGFGHRPHKDLWASKNENEEI----LERPAQLANARETPHSPGVEDAPIAKVG 343
KSKGNYDEGFGH+ HKD W KN++ + E P N E PG + +
Sbjct: 459 KSKGNYDEGFGHKQHKDRWNCKNQSRSVDFIPNEEPNMCKNIAENTLVPGDRNEHLD--- 515
Query: 344 VLAASMEAKASSQQEKEDKPAETKKLRIAWPPPTELGSSGSALEEGIKMSKPKWPPE-DE 402
+ Q+ K E KL++ WPP E+ EE +KMSKPKWPPE
Sbjct: 516 ------AGNSEGQRNDLRKLGERGKLKVIWPPSKEIPKKTLPFEEELKMSKPKWPPEMTT 569
Query: 403 ISKPEVPEDVDLDLKKLRRSSSLKERSRPFTVAASFQSTSVKSPKTVSPPIRKGWSMSEQ 462
+ PE + L+ + + ++ PF + QST V Q
Sbjct: 570 LLSPEFKSESLLEDVRTPENKGQRQDHFPF-LQPYLQSTHVC-----------------Q 611
Query: 463 SEESVGGRVAERKQVENAKASKKNGNVGKTTWQNKESKGETGKRSKEGHSLEMENENLVE 522
E+ +G + E K E K KK G+ Q++ S+ E K +++ +N N++
Sbjct: 612 KEDVIG--IKEMKMPEGRKDEKKE---GRKNVQDRPSEAEDTKSNRKSAMDLNDNNNVIV 666
Query: 523 NGADSDEDDNS 533
A+ ++++ +
Sbjct: 667 QSAEKEKNEKT 677
>gi|13386490 LIM domain containing 2 [Homo sapiens]
Length = 127
Score = 141 bits (355), Expect = 2e-33
Identities = 63/98 (64%), Positives = 76/98 (77%), Gaps = 2/98 (2%)
Query: 214 SSPPKAMKKF--QAPARETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYA 271
SS + K F +A +ETC CQKTVYPMERL+A++ +FH SCF C +C+ KLSLG+YA
Sbjct: 21 SSTVQRSKSFSLRAQVKETCAACQKTVYPMERLVADKLIFHNSCFCCKHCHTKLSLGSYA 80
Query: 272 SLHGRIYCKPHFNQLFKSKGNYDEGFGHRPHKDLWASK 309
+LHG YCKPHF QLFKSKGNYDEGFG + HK+LWA K
Sbjct: 81 ALHGEFYCKPHFQQLFKSKGNYDEGFGRKQHKELWAHK 118
>gi|209862793 microtubule associated monoxygenase, calponin and LIM
domain containing 3 isoform 2 [Homo sapiens]
Length = 1073
Score = 70.9 bits (172), Expect = 3e-12
Identities = 37/98 (37%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 188 QVKSEVQQPVHPKPLSPDSRASSLSESSPPKAMKKFQAPARETCVECQKTVYPMERLLAN 247
Q+ +++Q+ PK L S+ + P +TC CQK VY MERL A
Sbjct: 851 QIANQLQRKEQPKALLDKKELGSMKKEFPQNL------GGSDTCYFCQKRVYVMERLSAE 904
Query: 248 QQVFHISCFRCSYCNNKLSLGTYA--SLHGRIYCKPHF 283
+ FH SCF+C YC L L YA G+ YCKPH+
Sbjct: 905 GKFFHRSCFKCEYCATTLRLSAYAYDIEDGKFYCKPHY 942
>gi|170172518 microtubule associated monoxygenase, calponin and LIM
domain containing 3 isoform 3 [Homo sapiens]
Length = 966
Score = 65.5 bits (158), Expect = 1e-10
Identities = 30/57 (52%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 229 ETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYA--SLHGRIYCKPHF 283
+TC CQK VY MERL A + FH SCF+C YC L L YA G+ YCKPH+
Sbjct: 762 DTCYFCQKRVYVMERLSAEGKFFHRSCFKCEYCATTLRLSAYAYDIEDGKFYCKPHY 818
>gi|209862789 microtubule associated monoxygenase, calponin and LIM
domain containing 3 isoform 1 [Homo sapiens]
Length = 2002
Score = 65.5 bits (158), Expect = 1e-10
Identities = 30/57 (52%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 229 ETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYA--SLHGRIYCKPHF 283
+TC CQK VY MERL A + FH SCF+C YC L L YA G+ YCKPH+
Sbjct: 762 DTCYFCQKRVYVMERLSAEGKFFHRSCFKCEYCATTLRLSAYAYDIEDGKFYCKPHY 818
>gi|7662284 microtubule associated monoxygenase, calponin and LIM
domain containing 2 [Homo sapiens]
Length = 1124
Score = 64.7 bits (156), Expect = 2e-10
Identities = 49/149 (32%), Positives = 62/149 (41%), Gaps = 17/149 (11%)
Query: 205 DSRASSLSESSPPKAMKK---FQAPARETCVECQKTVYPMERLLANQQVFHISCFRCSYC 261
D R + + S ++M+K +TC C+K VY MERL A FH CFRCS C
Sbjct: 973 DHRPKAQATSPDLESMRKSFPLNLGGSDTCYFCKKRVYVMERLSAEGHFFHRECFRCSIC 1032
Query: 262 NNKLSLGTYA--SLHGRIYCKPHFNQLFKSKGNYDEGFGHRPHKDLWASKNENEEILERP 319
L L Y G+ YCKPHF K N + K K + EE
Sbjct: 1033 ATTLRLAAYTFDCDEGKFYCKPHF---IHCKTN------SKQRKRRAELKQQREEEATWQ 1083
Query: 320 AQLANARETPHSPGVEDAPIAKVGVLAAS 348
Q A R+TP +A +G L S
Sbjct: 1084 EQEAPRRDTPTE---SSCAVAAIGTLEGS 1109
>gi|33667117 MICAL-like 2 isoform 1 [Homo sapiens]
Length = 904
Score = 60.1 bits (144), Expect = 6e-09
Identities = 69/261 (26%), Positives = 98/261 (37%), Gaps = 34/261 (13%)
Query: 179 AEDDSPGDSQVKSEVQQ-------PVHPKPLSPDS------RASSLSESSPPKAMKKFQA 225
+ED S K+ VQ P PLSP R + + PPK +
Sbjct: 122 SEDSEEEPSGKKAPVQAAKLPSPAPARKPPLSPAQTNPVVQRRNEGAGGPPPKTDQALAG 181
Query: 226 P-ARETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASL--HGRIYCKPH 282
TC C K V+ ++R LA+ +++H SCFRC C+ L G Y + G C H
Sbjct: 182 SLVSSTCGVCGKHVHLVQRHLADGRLYHRSCFRCKQCSCTLHSGAYKATGEPGTFVCTSH 241
Query: 283 FNQLFKSKGNYDEGFGHRPHKDLWASKNENEEILERPAQLAN-ARETPHSPGVEDAPIAK 341
+ G P + + + AQ AN AR + P ++P A+
Sbjct: 242 LPAAASASPKLT---GLVPRQPGAMGVDSRTSCSPQKAQEANKARPSAWEPAAGNSP-AR 297
Query: 342 VGVLAASMEAKASSQQEKEDKPAETKKLRIAWPPPTE------------LGSSGSALEEG 389
V AA A S+ PA + R+A P PTE +G S +A
Sbjct: 298 ASVPAAPNPAATSATSVHVRSPARPSESRLA-PTPTEGKVRPRVTNSSPMGWSSAAPCTA 356
Query: 390 IKMSKPKWPPEDEISKPEVPE 410
S P PP +P P+
Sbjct: 357 AAASHPAVPPSAPDPRPATPQ 377
>gi|189083753 cysteine and glycine-rich protein 3 [Homo sapiens]
Length = 194
Score = 54.3 bits (129), Expect = 3e-07
Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 199 PKPLSPDSRASSLSESSPPKAMKKFQAPARETCVECQKTVYPMERLLANQQVFHISCFRC 258
PKP A S++ S+P K KF E C C K+VY E+++ + +H +CFRC
Sbjct: 96 PKP------ARSVTTSNPSKFTAKFGES--EKCPRCGKSVYAAEKVMGGGKPWHKTCFRC 147
Query: 259 SYCNNKLSLGTYASLHGRIYCKPHFNQLFKSKGNYDEGFG 298
+ C L G +YCK + + F G GFG
Sbjct: 148 AICGKSLESTNVTDKDGELYCKVCYAKNFGPTG---IGFG 184
Score = 53.9 bits (128), Expect = 4e-07
Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 231 CVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSK 290
C C+KTVY E + N + FH +CF C C L T A+ IYCK + + + K
Sbjct: 10 CGACEKTVYHAEEIQCNGRSFHKTCFHCMACRKALDSTTVAAHESEIYCKVCYGRRYGPK 69
Query: 291 G-NYDEGFG 298
G Y +G G
Sbjct: 70 GIGYGQGAG 78
>gi|4502893 cysteine and glycine-rich protein 3 [Homo sapiens]
Length = 194
Score = 54.3 bits (129), Expect = 3e-07
Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 199 PKPLSPDSRASSLSESSPPKAMKKFQAPARETCVECQKTVYPMERLLANQQVFHISCFRC 258
PKP A S++ S+P K KF E C C K+VY E+++ + +H +CFRC
Sbjct: 96 PKP------ARSVTTSNPSKFTAKFGES--EKCPRCGKSVYAAEKVMGGGKPWHKTCFRC 147
Query: 259 SYCNNKLSLGTYASLHGRIYCKPHFNQLFKSKGNYDEGFG 298
+ C L G +YCK + + F G GFG
Sbjct: 148 AICGKSLESTNVTDKDGELYCKVCYAKNFGPTG---IGFG 184
Score = 53.9 bits (128), Expect = 4e-07
Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 231 CVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSK 290
C C+KTVY E + N + FH +CF C C L T A+ IYCK + + + K
Sbjct: 10 CGACEKTVYHAEEIQCNGRSFHKTCFHCMACRKALDSTTVAAHESEIYCKVCYGRRYGPK 69
Query: 291 G-NYDEGFG 298
G Y +G G
Sbjct: 70 GIGYGQGAG 78
>gi|4758086 cysteine and glycine-rich protein 1 isoform 1 [Homo
sapiens]
Length = 193
Score = 53.5 bits (127), Expect = 5e-07
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 229 ETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFK 288
E C C + VY E+++ + +H +CFRC+ C L T A G IYCK + + F
Sbjct: 117 ERCPRCSQAVYAAEKVIGAGKSWHKACFRCAKCGKGLESTTLADKDGEIYCKGCYAKNFG 176
Query: 289 SKG-NYDEGFGHRPHKD 304
KG + +G G H +
Sbjct: 177 PKGFGFGQGAGALVHSE 193
Score = 49.7 bits (117), Expect = 8e-06
Identities = 27/69 (39%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 231 CVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSK 290
C CQKTVY E + FH SCF C C L T A IYCK + + + K
Sbjct: 10 CGVCQKTVYFAEEVQCEGNSFHKSCFLCMVCKKNLDSTTVAVHGEEIYCKSCYGKKYGPK 69
Query: 291 G-NYDEGFG 298
G Y +G G
Sbjct: 70 GYGYGQGAG 78
>gi|31324577 molecule interacting with Rab13 [Homo sapiens]
Length = 863
Score = 53.1 bits (126), Expect = 7e-07
Identities = 45/182 (24%), Positives = 74/182 (40%), Gaps = 16/182 (8%)
Query: 197 VHPKPLSPDSRASSLSESSPPKAMKKFQAPARETCVECQKTVYPMERLLANQQVFHISCF 256
V P P+ P+ A SS + + TC CQ+ V+ ++R LA+ +++H CF
Sbjct: 130 VAPTPVEPEDVAQGEELSSGSLSEQGTGQTPSSTCAACQQHVHLVQRYLADGRLYHRHCF 189
Query: 257 RCSYCNNKLSLGTYAS--LHGRIYCKPHFNQLFKSKGNYDEGFGHRPHKDLWASKNENEE 314
RC C++ L G Y + G C H +L + G RP + ++
Sbjct: 190 RCRRCSSTLLPGAYENGPEEGTFVCAEHCARLGPGTRS-----GTRPGPFSQPKQQHQQQ 244
Query: 315 ILERPAQLANARETPHSPGVEDAPIAKVGVLAASMEAKASSQQEKEDKPAETKKLRIAWP 374
+ E +A++ P AP G A +A ++ + KP KL+
Sbjct: 245 LAE------DAKDVPGGGPSSSAP---AGAEADGPKASPEARPQIPTKPRVPGKLQELAS 295
Query: 375 PP 376
PP
Sbjct: 296 PP 297
>gi|4503101 cysteine and glycine-rich protein 2 [Homo sapiens]
Length = 193
Score = 53.1 bits (126), Expect = 7e-07
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 229 ETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFK 288
E C C +VY E+++ + +H +CFRC+ C L T G IYCK + + F
Sbjct: 117 EKCSRCGDSVYAAEKIIGAGKPWHKNCFRCAKCGKSLESTTLTEKEGEIYCKGCYAKNFG 176
Query: 289 SKG-NYDEGFGHRPH 302
KG Y +G G H
Sbjct: 177 PKGFGYGQGAGALVH 191
Score = 46.2 bits (108), Expect = 9e-05
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 231 CVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSK 290
C C +TVY E + + + FH CF C C L T A IYCK + + + K
Sbjct: 10 CGACGRTVYHAEEVQCDGRSFHRCCFLCMVCRKNLDSTTVAIHDEEIYCKSCYGKKYGPK 69
Query: 291 G-NYDEGFG 298
G Y +G G
Sbjct: 70 GYGYGQGAG 78
>gi|4503049 cysteine-rich protein 2 [Homo sapiens]
Length = 208
Score = 52.4 bits (124), Expect = 1e-06
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Query: 204 PDSRASSLSESSPPKAMKKFQAPAR-----ETCVECQKTVYPMERLLANQQVFHISCFRC 258
P +RA S PPK + + TC C K VY E++ + + +H C RC
Sbjct: 94 PAARAEERKASGPPKGPSRASSVTTFTGEPNTCPRCSKKVYFAEKVTSLGKDWHRPCLRC 153
Query: 259 SYCNNKLSLGTYASLHGRIYC-KPHFNQLFKSKG 291
C L+ G +A G+ YC KP + LF KG
Sbjct: 154 ERCGKTLTPGGHAEHDGQPYCHKPCYGILFGPKG 187
Score = 47.8 bits (112), Expect = 3e-05
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Query: 231 CVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYC-KPHFNQLFKS 289
C +C KTVY E++ + + +H C +C C+ L+ G +A G+ +C KP + LF
Sbjct: 5 CPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATLFGP 64
Query: 290 KGNYDEGFGHRPHKDLWASKNENEEILERPAQLANARETPHSP 332
KG G G ++ A + +E PA A R+ P
Sbjct: 65 KGVNIGGAGSYIYEKPLAEGPQVTGPIEVPAARAEERKASGPP 107
>gi|66932986 filamin-binding LIM protein-1 isoform b [Homo sapiens]
Length = 374
Score = 52.0 bits (123), Expect = 2e-06
Identities = 39/153 (25%), Positives = 60/153 (39%), Gaps = 19/153 (12%)
Query: 150 PPGPEVCITHQE------GEKISANENSLAVRSTPAEDDSPGDSQVKSEVQQPVHPKPLS 203
PP P V + +E G + A+ L + P +P + V P PL
Sbjct: 108 PPPPPVLLPSEEEAPAPMGASLIADLEQLHLSPPPPPPQAPAEGP-------SVQPGPLR 160
Query: 204 PDSRASSLSESSPPKAMKKFQAPARETCVECQKTVYPMERLL-ANQQVFHISCFRCSYCN 262
P E PP A + + + C C KTV P E + A ++ +H CF C C
Sbjct: 161 PMEE-----ELPPPPAEPVEKGASTDICAFCHKTVSPRELAVEAMKRQYHAQCFTCRTCR 215
Query: 263 NKLSLGTYASLHGRIYCKPHFNQLFKSKGNYDE 295
+L+ ++ GR C+P + + G E
Sbjct: 216 RQLAGQSFYQKDGRPLCEPCYQDTLERCGKCGE 248
>gi|66932982 filamin-binding LIM protein-1 isoform a [Homo sapiens]
Length = 373
Score = 52.0 bits (123), Expect = 2e-06
Identities = 39/153 (25%), Positives = 60/153 (39%), Gaps = 19/153 (12%)
Query: 150 PPGPEVCITHQE------GEKISANENSLAVRSTPAEDDSPGDSQVKSEVQQPVHPKPLS 203
PP P V + +E G + A+ L + P +P + V P PL
Sbjct: 108 PPPPPVLLPSEEEAPAPMGASLIADLEQLHLSPPPPPPQAPAEGP-------SVQPGPLR 160
Query: 204 PDSRASSLSESSPPKAMKKFQAPARETCVECQKTVYPMERLL-ANQQVFHISCFRCSYCN 262
P E PP A + + + C C KTV P E + A ++ +H CF C C
Sbjct: 161 PMEE-----ELPPPPAEPVEKGASTDICAFCHKTVSPRELAVEAMKRQYHAQCFTCRTCR 215
Query: 263 NKLSLGTYASLHGRIYCKPHFNQLFKSKGNYDE 295
+L+ ++ GR C+P + + G E
Sbjct: 216 RQLAGQSFYQKDGRPLCEPCYQDTLERCGKCGE 248
Score = 29.6 bits (65), Expect = 8.3
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 11/61 (18%)
Query: 231 CVECQKTVYPME-----RLLANQQVFHISCFRCSYCNNKLSL-----GTYASLHGRIYCK 280
C C+ + P + ++ + FH +C+RC C LS+ G Y L+ ++CK
Sbjct: 303 CSICENPIIPRDGKDAFKIECMGRNFHENCYRCEDCRILLSVEPTDQGCY-PLNNHLFCK 361
Query: 281 P 281
P
Sbjct: 362 P 362
>gi|40804748 LIM and senescent cell antigen-like domains 2 isoform 2
[Homo sapiens]
Length = 365
Score = 50.8 bits (120), Expect = 3e-06
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 213 ESSPPKAMKKFQAPARETCVECQKTVYPMERLL-ANQQVFHISCFRCSYCNNKLSLGTYA 271
+S PP A A C CQ P ER++ +N +++H CF C+ C G +
Sbjct: 21 QSPPPATGNMSDALANAVCQRCQARFSPAERIVNSNGELYHEHCFVCAQCFRPFPEGLFY 80
Query: 272 SLHGRIYCKPHFNQLF 287
GR YC+ F LF
Sbjct: 81 EFEGRKYCEHDFQMLF 96
Score = 32.0 bits (71), Expect = 1.7
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Query: 231 CVECQKTVYPMERLLANQ--QVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLF 287
C C++ P+E + N + +H+ F C+ C + G YC+ H+NQLF
Sbjct: 222 CGACRR---PIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLF 277
Score = 30.4 bits (67), Expect = 4.9
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 251 FHISCFRCSYCNNKLSLGTYASLHGRIYCKP-HFNQLFKSKGNY 293
+H CFRC C+ +L+ + GR C+P H + K G Y
Sbjct: 119 WHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGLGKY 162
Score = 29.6 bits (65), Expect = 8.3
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 229 ETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSL 267
+ C C + + + A + + +SCF CS CN+KL+L
Sbjct: 279 DVCYNCSHVIEG-DVVSALNKAWCVSCFSCSTCNSKLTL 316
>gi|205360947 microtubule associated monoxygenase, calponin and LIM
domain containing 1 isoform 1 [Homo sapiens]
Length = 1067
Score = 50.4 bits (119), Expect = 5e-06
Identities = 36/120 (30%), Positives = 48/120 (40%), Gaps = 8/120 (6%)
Query: 179 AEDDSPGDSQVKSEVQQPVHPKPLSPDSRASSLSESSPPKAMKKFQAPARETCVECQKTV 238
AED +++ E + P P P+ +PP + +A A + C C + +
Sbjct: 651 AEDAGGKKLRLEMEAETPSTEVPPDPEPGVPL----TPPSQHQ--EAGAGDLCALCGEHL 704
Query: 239 YPMERLLANQQVFHISCFRCSYCNNKLSLGTYASL--HGRIYCKPHFNQLFKSKGNYDEG 296
Y +ERL N FH SCFRC C L G Y G YC H Q D G
Sbjct: 705 YVLERLCVNGHFFHRSCFRCHTCEATLWPGGYEQHPGDGHFYCLQHLPQTDHKAEGSDRG 764
>gi|226530313 microtubule associated monoxygenase, calponin and LIM
domain containing 1 isoform 2 [Homo sapiens]
Length = 981
Score = 50.4 bits (119), Expect = 5e-06
Identities = 36/120 (30%), Positives = 48/120 (40%), Gaps = 8/120 (6%)
Query: 179 AEDDSPGDSQVKSEVQQPVHPKPLSPDSRASSLSESSPPKAMKKFQAPARETCVECQKTV 238
AED +++ E + P P P+ +PP + +A A + C C + +
Sbjct: 565 AEDAGGKKLRLEMEAETPSTEVPPDPEPGVPL----TPPSQHQ--EAGAGDLCALCGEHL 618
Query: 239 YPMERLLANQQVFHISCFRCSYCNNKLSLGTYASL--HGRIYCKPHFNQLFKSKGNYDEG 296
Y +ERL N FH SCFRC C L G Y G YC H Q D G
Sbjct: 619 YVLERLCVNGHFFHRSCFRCHTCEATLWPGGYEQHPGDGHFYCLQHLPQTDHKAEGSDRG 678
>gi|221316627 cysteine and glycine-rich protein 1 isoform 2 [Homo
sapiens]
Length = 140
Score = 49.7 bits (117), Expect = 8e-06
Identities = 27/69 (39%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 231 CVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSK 290
C CQKTVY E + FH SCF C C L T A IYCK + + + K
Sbjct: 10 CGVCQKTVYFAEEVQCEGNSFHKSCFLCMVCKKNLDSTTVAVHGEEIYCKSCYGKKYGPK 69
Query: 291 G-NYDEGFG 298
G Y +G G
Sbjct: 70 GYGYGQGAG 78
>gi|116517305 cysteine-rich protein 3 [Homo sapiens]
Length = 204
Score = 48.5 bits (114), Expect = 2e-05
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 5/99 (5%)
Query: 196 PVHPKPLSPDSRASSLSES--SPPKAMKKFQAPARETCVECQKTVYPMERLLANQQVFHI 253
P+ P SP + L + SPP MK F C C + VY E++++ + +H
Sbjct: 89 PLSPSSFSPPRPRTGLPQGKKSPPH-MKTFTGET-SLCPGCGEPVYFAEKVMSLGRNWHR 146
Query: 254 SCFRCSYCNNKLSLGTYASLHGRIYCK-PHFNQLFKSKG 291
C RC C+ L+ G++A G YC P + LF KG
Sbjct: 147 PCLRCQRCHKTLTAGSHAEHDGVPYCHVPCYGYLFGPKG 185
Score = 47.0 bits (110), Expect = 5e-05
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 230 TCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYC-KPHFNQLFK 288
TC CQ+ V+ E++ + + +H C +C C++ LS G +A +GR YC KP + LF
Sbjct: 4 TCPRCQQPVFFAEKVSSLGKNWHRFCLKCERCHSILSPGGHAEHNGRPYCHKPCYGALFG 63
Query: 289 SKGNYDEGFG 298
+G G G
Sbjct: 64 PRGVNIGGVG 73
>gi|5453710 LIM and SH3 protein 1 [Homo sapiens]
Length = 261
Score = 47.0 bits (110), Expect = 5e-05
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Query: 231 CVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHF-NQLFKS 289
C C K VYP E++ + +H +CF C C L++ Y + YC H+ Q F
Sbjct: 5 CARCGKIVYPTEKVNCLDKFWHKACFHCETCKMTLNMKNYKGYEKKPYCNAHYPKQSFTM 64
Query: 290 KGNYDEGFGHRPHKDLWASKNENEE 314
+ E + +L + EE
Sbjct: 65 VADTPENLRLKQQSELQSQVRYKEE 89
>gi|47087157 nebulette non-muscle isoform [Homo sapiens]
Length = 270
Score = 47.0 bits (110), Expect = 5e-05
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 231 CVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHF 283
C C K VYP E++ + +H CF C C L++ Y + YC H+
Sbjct: 5 CARCGKVVYPTEKVNCLDKYWHKGCFHCEVCKMALNMNNYKGYEKKPYCNAHY 57
>gi|239741720 PREDICTED: hypothetical protein XP_002342298 [Homo
sapiens]
Length = 248
Score = 46.6 bits (109), Expect = 7e-05
Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 13/117 (11%)
Query: 184 PGDSQVKSEVQQPVHPKPLSPDSRASSLSES--SPPKAMKKF----------QAPARETC 231
P + ++ VH + D RA S + S K K+F A A TC
Sbjct: 13 PENEEIPRAALNTVHEANGTEDERAVSKLQRRHSDVKVYKEFCDFYAKFNMANALASATC 72
Query: 232 VECQKTVYPMERLL-ANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLF 287
C+ P E ++ +N +++H CF C+ C + G + GR YC+ F LF
Sbjct: 73 ERCKGGFAPAETIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLF 129
>gi|238859658 LIM and senescent cell antigen-like domains 2 isoform
1 [Homo sapiens]
Length = 363
Score = 46.2 bits (108), Expect = 9e-05
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 225 APARETCVECQKTVYPMERLL-ANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHF 283
A A C CQ P ER++ +N +++H CF C+ C G + GR YC+ F
Sbjct: 31 ALANAVCQRCQARFSPAERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDF 90
Query: 284 NQLF 287
LF
Sbjct: 91 QMLF 94
Score = 32.0 bits (71), Expect = 1.7
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Query: 231 CVECQKTVYPMERLLANQ--QVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLF 287
C C++ P+E + N + +H+ F C+ C + G YC+ H+NQLF
Sbjct: 220 CGACRR---PIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLF 275
Score = 30.4 bits (67), Expect = 4.9
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 251 FHISCFRCSYCNNKLSLGTYASLHGRIYCKP-HFNQLFKSKGNY 293
+H CFRC C+ +L+ + GR C+P H + K G Y
Sbjct: 117 WHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGLGKY 160
Score = 29.6 bits (65), Expect = 8.3
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 229 ETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSL 267
+ C C + + + A + + +SCF CS CN+KL+L
Sbjct: 277 DVCYNCSHVIEG-DVVSALNKAWCVSCFSCSTCNSKLTL 314
>gi|238776788 LIM and senescent cell antigen-like domains 2 isoform
5 [Homo sapiens]
Length = 336
Score = 46.2 bits (108), Expect = 9e-05
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 225 APARETCVECQKTVYPMERLL-ANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHF 283
A A C CQ P ER++ +N +++H CF C+ C G + GR YC+ F
Sbjct: 4 ALANAVCQRCQARFSPAERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDF 63
Query: 284 NQLF 287
LF
Sbjct: 64 QMLF 67
Score = 32.0 bits (71), Expect = 1.7
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Query: 231 CVECQKTVYPMERLLANQ--QVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLF 287
C C++ P+E + N + +H+ F C+ C + G YC+ H+NQLF
Sbjct: 193 CGACRR---PIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLF 248
Score = 30.4 bits (67), Expect = 4.9
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 251 FHISCFRCSYCNNKLSLGTYASLHGRIYCKP-HFNQLFKSKGNY 293
+H CFRC C+ +L+ + GR C+P H + K G Y
Sbjct: 90 WHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGLGKY 133
Score = 29.6 bits (65), Expect = 8.3
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 229 ETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSL 267
+ C C + + + A + + +SCF CS CN+KL+L
Sbjct: 250 DVCYNCSHVIEG-DVVSALNKAWCVSCFSCSTCNSKLTL 287
>gi|238776786 LIM and senescent cell antigen-like domains 2 isoform
3 [Homo sapiens]
Length = 341
Score = 46.2 bits (108), Expect = 9e-05
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 225 APARETCVECQKTVYPMERLL-ANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHF 283
A A C CQ P ER++ +N +++H CF C+ C G + GR YC+ F
Sbjct: 9 ALANAVCQRCQARFSPAERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDF 68
Query: 284 NQLF 287
LF
Sbjct: 69 QMLF 72
Score = 32.0 bits (71), Expect = 1.7
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Query: 231 CVECQKTVYPMERLLANQ--QVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLF 287
C C++ P+E + N + +H+ F C+ C + G YC+ H+NQLF
Sbjct: 198 CGACRR---PIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLF 253
Score = 30.4 bits (67), Expect = 4.9
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 251 FHISCFRCSYCNNKLSLGTYASLHGRIYCKP-HFNQLFKSKGNY 293
+H CFRC C+ +L+ + GR C+P H + K G Y
Sbjct: 95 WHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGLGKY 138
Score = 29.6 bits (65), Expect = 8.3
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 229 ETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSL 267
+ C C + + + A + + +SCF CS CN+KL+L
Sbjct: 255 DVCYNCSHVIEG-DVVSALNKAWCVSCFSCSTCNSKLTL 292
>gi|46049092 nebulin-related anchoring protein isoform C [Homo
sapiens]
Length = 1695
Score = 46.2 bits (108), Expect = 9e-05
Identities = 18/54 (33%), Positives = 27/54 (50%)
Query: 229 ETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPH 282
+ C C VYP E++ Q++H +CF C C LS+ + S + YC H
Sbjct: 4 QPCSRCGYGVYPAEKISCIDQIWHKACFHCEVCKMMLSVNNFVSHQKKPYCHAH 57
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.305 0.123 0.343
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,118,117
Number of Sequences: 37866
Number of extensions: 1239095
Number of successful extensions: 5240
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 126
Number of HSP's successfully gapped in prelim test: 325
Number of HSP's that attempted gapping in prelim test: 4618
Number of HSP's gapped (non-prelim): 933
length of query: 600
length of database: 18,247,518
effective HSP length: 108
effective length of query: 492
effective length of database: 14,157,990
effective search space: 6965731080
effective search space used: 6965731080
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.