Guide to the Human Genome
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Name: CSRP3 Sequence: fasta or formatted (194aa) NCBI GI: 189083753
Description:

cysteine and glycine-rich protein 3

Referenced in:

LIM Domain Proteins

Other entries for this name:
alt mRNA [194aa] cysteine and glycine-rich protein 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         14           2
 C cysteine            8.2         16           1
 D aspartate           2.1          4           1
 E glutamate           6.7         13           2
 F phenylalanine       4.1          8           1
 G glycine            13.4         26           3
 H histidine           3.1          6           1
 I isoleucine          2.6          5           1
 K lysine             10.3         20           2
 L leucine             3.6          7           1
 M methionine          1.5          3           1
 N asparagine          2.6          5           1
 P proline             4.1          8           1
 Q glutamine           3.6          7           2
 R arginine            3.6          7           2
 S serine              6.2         12           1
 T threonine           7.2         14           2
 V valine              4.6          9           1
 W tryptophan          1.0          2           1
 Y tyrosine            4.1          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cysteine and glycine-rich protein 3 
CSRP3                 1.000   cysteine and glycine-rich protein 3 
CSRP2                 0.662   cysteine and glycine-rich protein 2 
CSRP1                 0.657   cysteine and glycine-rich protein 1 isoform 1 
CSRP1                 0.453   cysteine and glycine-rich protein 1 isoform 2 [Homo...
CRIP2                 0.260   cysteine-rich protein 2 
CRIP3                 0.233   cysteine-rich protein 3 
CRIP1                 0.133   cysteine-rich protein 1 (intestinal) 
FHL3                  0.122   four and a half LIM domains 3 
FHL1                  0.117   four and a half LIM domains 1 isoform 2 
FHL1                  0.117   four and a half LIM domains 1 isoform 1 
FHL1                  0.117   four and a half LIM domains 1 isoform 2 
FHL1                  0.117   four and a half LIM domains 1 isoform 3 
FHL1                  0.117   four and a half LIM domains 1 isoform 5 
FHL1                  0.117   four and a half LIM domains 1 isoform 2 
FHL2                  0.113   four and a half LIM domains 2 
FHL2                  0.113   four and a half LIM domains 2 
FHL2                  0.113   four and a half LIM domains 2 
FHL2                  0.113   four and a half LIM domains 2 
ABLIM1                0.085   actin-binding LIM protein 1 isoform c 
ABLIM1                0.085   actin-binding LIM protein 1 isoform b 
ABLIM1                0.085   actin-binding LIM protein 1 isoform a 
ABLIM2                0.080   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.080   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.080   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.080   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.080   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.080   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.080   actin binding LIM protein family, member 2 isoform ...
FHL1                  0.077   four and a half LIM domains 1 isoform 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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