Guide to the Human Genome
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Name: NEBL Sequence: fasta or formatted (270aa) NCBI GI: 47087157
Description:

nebulette non-muscle isoform

Referenced in:

LIM Domain Proteins
Muscle
Non-Receptor Tyrosine Kinase Pathways

Other entries for this name:
alt prot [1014aa] nebulette sarcomeric isoform
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.1         11           2
 C cysteine            2.6          7           1
 D aspartate           5.9         16           2
 E glutamate           5.9         16           2
 F phenylalanine       3.0          8           1
 G glycine             6.3         17           1
 H histidine           3.3          9           1
 I isoleucine          3.0          8           2
 K lysine              7.0         19           2
 L leucine             3.7         10           1
 M methionine          3.7         10           1
 N asparagine          4.8         13           2
 P proline             5.6         15           1
 Q glutamine           6.7         18           2
 R arginine            6.3         17           2
 S serine              5.9         16           2
 T threonine           5.9         16           2
 V valine              8.9         24           2
 W tryptophan          0.7          2           1
 Y tyrosine            6.7         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nebulette non-muscle isoform 
LASP1                 0.578   LIM and SH3 protein 1 
NEBL                  0.323   nebulette sarcomeric isoform 
NRAP                  0.183   nebulin-related anchoring protein isoform C 
NRAP                  0.183   nebulin-related anchoring protein isoform S 
NEB                   0.141   nebulin 
SORBS3                0.070   sorbin and SH3 domain containing 3 isoform 1 
SORBS3                0.070   sorbin and SH3 domain containing 3 isoform 2 
SORBS1                0.070   sorbin and SH3 domain containing 1 isoform 4 
SORBS1                0.070   sorbin and SH3 domain containing 1 isoform 3 
SORBS1                0.068   sorbin and SH3 domain containing 1 isoform 7 
SORBS1                0.068   sorbin and SH3 domain containing 1 isoform 6 
SORBS1                0.068   sorbin and SH3 domain containing 1 isoform 5 
SORBS1                0.068   sorbin and SH3 domain containing 1 isoform 2 
SORBS1                0.068   sorbin and SH3 domain containing 1 isoform 1 
SH3D19                0.064   SH3 domain containing 19 isoform c 
SH3D19                0.064   SH3 domain containing 19 isoform b 
SH3D19                0.064   SH3 domain containing 19 isoform a 
CTTN                  0.062   cortactin isoform a 
CTTN                  0.062   cortactin isoform b 
CRIP1                 0.061   cysteine-rich protein 1 (intestinal) 
SH3RF3                0.057   SH3 domain containing ring finger 3 
DBNL                  0.055   drebrin-like isoform c 
DBNL                  0.055   drebrin-like isoform a 
PACSIN3               0.055   protein kinase C and casein kinase substrate in neur...
CSRP3                 0.053   cysteine and glycine-rich protein 3 
CSRP3                 0.053   cysteine and glycine-rich protein 3 
DBNL                  0.053   drebrin-like isoform b 
CRIP2                 0.053   cysteine-rich protein 2 
SORBS2                0.053   sorbin and SH3 domain containing 2 isoform 8 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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