Guide to the Human Genome
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Name: CSRP1 Sequence: fasta or formatted (193aa) NCBI GI: 4758086
Description:

cysteine and glycine-rich protein 1 isoform 1

Referenced in:

LIM Domain Proteins

Other entries for this name:
alt prot [140aa] cysteine and glycine-rich protein 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         16           2
 C cysteine            7.8         15           1
 D aspartate           2.1          4           1
 E glutamate           6.7         13           2
 F phenylalanine       4.1          8           1
 G glycine            15.5         30           3
 H histidine           3.1          6           1
 I isoleucine          2.6          5           1
 K lysine             11.9         23           2
 L leucine             3.6          7           1
 M methionine          1.0          2           1
 N asparagine          3.1          6           1
 P proline             3.6          7           1
 Q glutamine           3.1          6           1
 R arginine            2.1          4           1
 S serine              6.2         12           1
 T threonine           4.7          9           2
 V valine              4.7          9           1
 W tryptophan          1.0          2           1
 Y tyrosine            4.7          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cysteine and glycine-rich protein 1 isoform 1 
CSRP2                 0.819   cysteine and glycine-rich protein 2 
CSRP1                 0.690   cysteine and glycine-rich protein 1 isoform 2 [Homo...
CSRP3                 0.662   cysteine and glycine-rich protein 3 
CSRP3                 0.662   cysteine and glycine-rich protein 3 
CRIP2                 0.270   cysteine-rich protein 2 
CRIP3                 0.222   cysteine-rich protein 3 
CRIP1                 0.144   cysteine-rich protein 1 (intestinal) 
ABLIM1                0.111   actin-binding LIM protein 1 isoform c 
ABLIM1                0.111   actin-binding LIM protein 1 isoform b 
ABLIM1                0.111   actin-binding LIM protein 1 isoform a 
FHL3                  0.101   four and a half LIM domains 3 
FHL1                  0.096   four and a half LIM domains 1 isoform 2 
FHL1                  0.096   four and a half LIM domains 1 isoform 2 
FHL1                  0.096   four and a half LIM domains 1 isoform 3 
FHL1                  0.096   four and a half LIM domains 1 isoform 5 
FHL1                  0.096   four and a half LIM domains 1 isoform 2 
ABLIM3                0.093   actin binding LIM protein family, member 3 
ABLIM2                0.088   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.088   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.088   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.088   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.088   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.088   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.088   actin binding LIM protein family, member 2 isoform ...
FHL1                  0.083   four and a half LIM domains 1 isoform 1 
MICAL3                0.078   microtubule associated monoxygenase, calponin and L...
MICAL3                0.078   microtubule associated monoxygenase, calponin and L...
MICAL3                0.078   microtubule associated monoxygenase, calponin and L...
FHL2                  0.076   four and a half LIM domains 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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