Guide to the Human Genome
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Name: MICAL3 Sequence: fasta or formatted (1073aa) NCBI GI: 209862793
Description:

microtubule associated monoxygenase, calponin and LIM domain containing 3 isoform 2

Referenced in:

LIM Domain Proteins

Other entries for this name:
alt prot [966aa] microtubule associated monoxygenase, calponin and LIM domain cont...
alt prot [2002aa] microtubule associated monoxygenase, calponin and LIM domain cont...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         83           2
 C cysteine            2.0         21           1
 D aspartate           5.2         56           2
 E glutamate           6.7         72           4
 F phenylalanine       4.4         47           2
 G glycine             6.2         67           2
 H histidine           2.5         27           2
 I isoleucine          4.4         47           2
 K lysine              7.1         76           2
 L leucine            10.1        108           3
 M methionine          2.1         22           1
 N asparagine          3.6         39           2
 P proline             4.8         51           3
 Q glutamine           5.0         54           3
 R arginine            6.4         69           2
 S serine              7.4         79           2
 T threonine           5.1         55           2
 V valine              4.9         53           3
 W tryptophan          1.1         12           1
 Y tyrosine            3.3         35           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   microtubule associated monoxygenase, calponin and L... 
MICAL3                0.686   microtubule associated monoxygenase, calponin and L...
MICAL3                0.686   microtubule associated monoxygenase, calponin and L...
MICAL2                0.456   microtubule associated monoxygenase, calponin and LIM...
MICAL1                0.309   microtubule associated monoxygenase, calponin and L...
MICAL1                0.170   microtubule associated monoxygenase, calponin and L...
MICALL1               0.046   molecule interacting with Rab13 
MICALL2               0.040   MICAL-like 2 isoform 1 
SPTB                  0.036   spectrin beta isoform a 
SPTB                  0.036   spectrin beta isoform b 
EHBP1L1               0.036   tangerin 
SPTBN2                0.035   spectrin, beta, non-erythrocytic 2 
SPTBN1                0.034   spectrin, beta, non-erythrocytic 1 isoform 2 
SPTBN1                0.034   spectrin, beta, non-erythrocytic 1 isoform 1 
EHBP1                 0.034   EH domain binding protein 1 isoform 3 
EHBP1                 0.034   EH domain binding protein 1 isoform 3 
EHBP1                 0.034   EH domain binding protein 1 isoform 2 
EHBP1                 0.034   EH domain binding protein 1 isoform 1 
ACTN2                 0.034   actinin, alpha 2 
ACTN3                 0.033   actinin, alpha 3 
ACTN1                 0.033   actinin, alpha 1 isoform c 
ACTN1                 0.033   actinin, alpha 1 isoform a 
ACTN1                 0.033   actinin, alpha 1 isoform b 
SPTBN4                0.032   spectrin, beta, non-erythrocytic 4 isoform sigma1 [...
ACTN4                 0.031   actinin, alpha 4 
CYTSB                 0.031   spectrin domain with coiled-coils 1 NSP5a3b 
CYTSB                 0.031   spectrin domain with coiled-coils 1 NSP5b3b 
SPTBN5                0.029   spectrin, beta, non-erythrocytic 5 
CYTSA                 0.029   cytospin A 
CYTSA                 0.029   cytospin A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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