Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: CRIP3 Sequence: fasta or formatted (204aa) NCBI GI: 116517305
Description:

cysteine-rich protein 3

Referenced in:

Stomach, Small Intestine, and Colon
LIM Domain Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.9          6           1
 C cysteine            7.8         16           1
 D aspartate           1.5          3           1
 E glutamate           3.4          7           1
 F phenylalanine       4.4          9           2
 G glycine            11.8         24           2
 H histidine           5.4         11           1
 I isoleucine          2.5          5           1
 K lysine              6.4         13           2
 L leucine             5.9         12           1
 M methionine          1.5          3           1
 N asparagine          2.9          6           1
 P proline            12.3         25           2
 Q glutamine           2.0          4           2
 R arginine            5.4         11           1
 S serine              7.4         15           2
 T threonine           4.9         10           2
 V valine              5.4         11           1
 W tryptophan          1.5          3           1
 Y tyrosine            4.9         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cysteine-rich protein 3 
CRIP2                 0.596   cysteine-rich protein 2 
CSRP3                 0.211   cysteine and glycine-rich protein 3 
CSRP3                 0.211   cysteine and glycine-rich protein 3 
CSRP1                 0.200   cysteine and glycine-rich protein 1 isoform 1 
CSRP2                 0.197   cysteine and glycine-rich protein 2 
CRIP1                 0.195   cysteine-rich protein 1 (intestinal) 
TGFB1I1               0.109   transforming growth factor beta 1 induced transcrip...
TGFB1I1               0.109   transforming growth factor beta 1 induced transcript...
CSRP1                 0.102   cysteine and glycine-rich protein 1 isoform 2 [Homo...
ABLIM1                0.100   actin-binding LIM protein 1 isoform c 
ABLIM1                0.100   actin-binding LIM protein 1 isoform b 
ABLIM1                0.100   actin-binding LIM protein 1 isoform a 
PXN                   0.095   paxillin isoform 3 
PXN                   0.095   paxillin isoform 2 
PXN                   0.095   paxillin isoform 1 
MICAL1                0.084   microtubule associated monoxygenase, calponin and L...
MICAL1                0.084   microtubule associated monoxygenase, calponin and L...
ABLIM2                0.077   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.077   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.077   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.077   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.077   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.077   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.077   actin binding LIM protein family, member 2 isoform ...
LIMS1                 0.073   LIM and senescent cell antigen-like domains 1 
LPXN                  0.073   leupaxin isoform 1 
LPXN                  0.073   leupaxin isoform 2 
MICALL2               0.070   MICAL-like 2 isoform 1 
ABLIM3                0.068   actin binding LIM protein family, member 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press