Guide to the Human Genome
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Name: CRIP2 Sequence: fasta or formatted (208aa) NCBI GI: 4503049
Description:

cysteine-rich protein 2

Referenced in:

Stomach, Small Intestine, and Colon
LIM Domain Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         14           2
 C cysteine            6.7         14           1
 D aspartate           3.4          7           1
 E glutamate           6.2         13           2
 F phenylalanine       3.4          7           1
 G glycine            12.0         25           2
 H histidine           3.8          8           1
 I isoleucine          2.4          5           1
 K lysine             10.6         22           2
 L leucine             4.3          9           1
 M methionine          0.5          1           1
 N asparagine          1.4          3           1
 P proline            10.1         21           2
 Q glutamine           1.4          3           1
 R arginine            4.3          9           1
 S serine              5.8         12           2
 T threonine           6.2         13           2
 V valine              5.3         11           1
 W tryptophan          1.0          2           1
 Y tyrosine            4.3          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cysteine-rich protein 2 
CRIP3                 0.605   cysteine-rich protein 3 
CSRP1                 0.246   cysteine and glycine-rich protein 1 isoform 1 
CSRP3                 0.239   cysteine and glycine-rich protein 3 
CSRP3                 0.239   cysteine and glycine-rich protein 3 
CRIP1                 0.239   cysteine-rich protein 1 (intestinal) 
CSRP2                 0.214   cysteine and glycine-rich protein 2 
CSRP1                 0.140   cysteine and glycine-rich protein 1 isoform 2 [Homo...
PXN                   0.090   paxillin isoform 3 
PXN                   0.090   paxillin isoform 2 
PXN                   0.090   paxillin isoform 1 
ABLIM1                0.087   actin-binding LIM protein 1 isoform c 
ABLIM1                0.087   actin-binding LIM protein 1 isoform b 
ABLIM1                0.087   actin-binding LIM protein 1 isoform a 
LASP1                 0.069   LIM and SH3 protein 1 
TGFB1I1               0.069   transforming growth factor beta 1 induced transcrip...
TGFB1I1               0.069   transforming growth factor beta 1 induced transcript...
ABLIM3                0.069   actin binding LIM protein family, member 3 
NEBL                  0.067   nebulette non-muscle isoform 
NRAP                  0.067   nebulin-related anchoring protein isoform C 
NRAP                  0.067   nebulin-related anchoring protein isoform S 
FHL3                  0.067   four and a half LIM domains 3 
LIMA1                 0.062   LIM domain and actin binding 1 isoform c 
LIMA1                 0.062   LIM domain and actin binding 1 isoform a 
LIMA1                 0.062   LIM domain and actin binding 1 isoform b 
ABLIM2                0.060   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.060   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.060   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.060   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.060   actin binding LIM protein family, member 2 isoform ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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