LOC100288695 16961

Name: LOC100288695	Sequence: fasta or formatted (248aa)		NCBI GI: 239741720
Description: PREDICTED: hypothetical protein XP_002342298		Referenced in: LIM Domain Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.7 24 2 C cysteine 8.9 22 2 D aspartate 4.0 10 1 E glutamate 8.9 22 2 F phenylalanine 6.9 17 1 G glycine 6.9 17 2 H histidine 4.4 11 1 I isoleucine 5.2 13 2 K lysine 4.8 12 1 L leucine 4.8 12 1 M methionine 2.0 5 1 N asparagine 5.6 14 2 P proline 5.2 13 1 Q glutamine 4.4 11 2 R arginine 6.5 16 2 S serine 2.8 7 1 T threonine 2.0 5 1 V valine 3.6 9 1 W tryptophan 0.4 1 1 Y tyrosine 2.8 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002342298 LIMS1 0.672 LIM and senescent cell antigen-like domains 1 LIMS2 0.569 LIM and senescent cell antigen-like domains 2 isofo... LIMS2 0.569 LIM and senescent cell antigen-like domains 2 isofo... LIMS2 0.569 LIM and senescent cell antigen-like domains 2 isofor... LIMS2 0.564 LIM and senescent cell antigen-like domains 2 isofo... LIMS3 0.417 LIM and senescent cell antigen-like domains 3 LOC100293468 0.353 PREDICTED: similar to LIM and senescent cell antige... PXN 0.133 paxillin isoform 3 PXN 0.133 paxillin isoform 2 PXN 0.133 paxillin isoform 1 TGFB1I1 0.129 transforming growth factor beta 1 induced transcrip... TGFB1I1 0.129 transforming growth factor beta 1 induced transcript... ZYX 0.127 zyxin ZYX 0.127 zyxin LPXN 0.127 leupaxin isoform 1 LPXN 0.127 leupaxin isoform 2 LIMD1 0.124 LIM domains containing 1 JUB 0.118 ajuba isoform 1 ABLIM1 0.106 actin-binding LIM protein 1 isoform c ABLIM1 0.106 actin-binding LIM protein 1 isoform b ABLIM1 0.106 actin-binding LIM protein 1 isoform a FHL5 0.106 activator of cAMP-responsive element modulator (CREM... WTIP 0.106 Wilms tumor 1 interacting protein FHL1 0.104 four and a half LIM domains 1 isoform 2 FHL1 0.104 four and a half LIM domains 1 isoform 1 FHL1 0.104 four and a half LIM domains 1 isoform 2 FHL1 0.104 four and a half LIM domains 1 isoform 3 FHL1 0.104 four and a half LIM domains 1 isoform 5 FHL1 0.104 four and a half LIM domains 1 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.