Guide to the Human Genome
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Name: CSRP2 Sequence: fasta or formatted (193aa) NCBI GI: 4503101
Description:

cysteine and glycine-rich protein 2

Referenced in:

LIM Domain Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         14           2
 C cysteine            8.3         16           2
 D aspartate           2.6          5           1
 E glutamate           6.2         12           2
 F phenylalanine       3.1          6           1
 G glycine            15.0         29           3
 H histidine           3.1          6           1
 I isoleucine          3.1          6           2
 K lysine              9.8         19           2
 L leucine             3.6          7           1
 M methionine          1.6          3           1
 N asparagine          3.6          7           1
 P proline             4.1          8           1
 Q glutamine           3.1          6           1
 R arginine            4.7          9           1
 S serine              4.7          9           1
 T threonine           5.2         10           2
 V valine              4.1          8           1
 W tryptophan          1.0          2           1
 Y tyrosine            5.7         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cysteine and glycine-rich protein 2 
CSRP1                 0.806   cysteine and glycine-rich protein 1 isoform 1 
CSRP3                 0.658   cysteine and glycine-rich protein 3 
CSRP3                 0.658   cysteine and glycine-rich protein 3 
CSRP1                 0.536   cysteine and glycine-rich protein 1 isoform 2 [Homo...
CRIP2                 0.231   cysteine-rich protein 2 
CRIP3                 0.216   cysteine-rich protein 3 
CRIP1                 0.136   cysteine-rich protein 1 (intestinal) 
FHL3                  0.109   four and a half LIM domains 3 
FHL2                  0.107   four and a half LIM domains 2 
FHL2                  0.107   four and a half LIM domains 2 
FHL2                  0.107   four and a half LIM domains 2 
FHL2                  0.107   four and a half LIM domains 2 
ABLIM2                0.102   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.102   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.102   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.102   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.102   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.102   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.102   actin binding LIM protein family, member 2 isoform ...
FHL1                  0.099   four and a half LIM domains 1 isoform 2 
FHL1                  0.099   four and a half LIM domains 1 isoform 2 
FHL1                  0.099   four and a half LIM domains 1 isoform 3 
FHL1                  0.099   four and a half LIM domains 1 isoform 5 
FHL1                  0.099   four and a half LIM domains 1 isoform 2 
FHL1                  0.097   four and a half LIM domains 1 isoform 1 
ABLIM1                0.094   actin-binding LIM protein 1 isoform c 
ABLIM1                0.094   actin-binding LIM protein 1 isoform b 
ABLIM1                0.094   actin-binding LIM protein 1 isoform a 
ABLIM3                0.087   actin binding LIM protein family, member 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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