Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 165905589
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|165905589 LIM domain and actin binding 1 isoform a [Homo
sapiens]
(760 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|165905589 LIM domain and actin binding 1 isoform a [Homo sapi... 1520 0.0
gi|7705373 LIM domain and actin binding 1 isoform b [Homo sapiens] 1509 0.0
gi|165905591 LIM domain and actin binding 1 isoform c [Homo sapi... 1202 0.0
gi|119372315 xin actin-binding repeat containing 2 isoform 2 [Ho... 222 9e-58
gi|13386490 LIM domain containing 2 [Homo sapiens] 141 3e-33
gi|209862793 microtubule associated monoxygenase, calponin and L... 71 4e-12
gi|170172518 microtubule associated monoxygenase, calponin and L... 65 2e-10
gi|209862789 microtubule associated monoxygenase, calponin and L... 65 2e-10
gi|7662284 microtubule associated monoxygenase, calponin and LIM... 65 3e-10
gi|33667117 MICAL-like 2 isoform 1 [Homo sapiens] 60 8e-09
gi|189083753 cysteine and glycine-rich protein 3 [Homo sapiens] 54 4e-07
gi|4502893 cysteine and glycine-rich protein 3 [Homo sapiens] 54 4e-07
gi|4758086 cysteine and glycine-rich protein 1 isoform 1 [Homo s... 54 7e-07
gi|31324577 molecule interacting with Rab13 [Homo sapiens] 53 9e-07
gi|4503101 cysteine and glycine-rich protein 2 [Homo sapiens] 53 9e-07
gi|4503049 cysteine-rich protein 2 [Homo sapiens] 52 2e-06
gi|66932986 filamin-binding LIM protein-1 isoform b [Homo sapiens] 52 2e-06
gi|66932982 filamin-binding LIM protein-1 isoform a [Homo sapiens] 52 2e-06
gi|40804748 LIM and senescent cell antigen-like domains 2 isofor... 51 5e-06
gi|205360947 microtubule associated monoxygenase, calponin and L... 50 6e-06
gi|226530313 microtubule associated monoxygenase, calponin and L... 50 6e-06
gi|221316627 cysteine and glycine-rich protein 1 isoform 2 [Homo... 50 1e-05
gi|116517305 cysteine-rich protein 3 [Homo sapiens] 49 2e-05
gi|5453710 LIM and SH3 protein 1 [Homo sapiens] 47 7e-05
gi|47087157 nebulette non-muscle isoform [Homo sapiens] 47 7e-05
gi|239741720 PREDICTED: hypothetical protein XP_002342298 [Homo ... 47 9e-05
gi|238859658 LIM and senescent cell antigen-like domains 2 isofo... 46 1e-04
gi|238776788 LIM and senescent cell antigen-like domains 2 isofo... 46 1e-04
gi|238776786 LIM and senescent cell antigen-like domains 2 isofo... 46 1e-04
gi|46049092 nebulin-related anchoring protein isoform C [Homo sa... 46 1e-04
>gi|165905589 LIM domain and actin binding 1 isoform a [Homo
sapiens]
Length = 760
Score = 1520 bits (3935), Expect = 0.0
Identities = 760/760 (100%), Positives = 760/760 (100%)
Query: 1 MESSPFNRRQWTSLSLRVTAKELSLVNKNKSSAIVEIFSKYQKAAEETNMEKKRSNTENL 60
MESSPFNRRQWTSLSLRVTAKELSLVNKNKSSAIVEIFSKYQKAAEETNMEKKRSNTENL
Sbjct: 1 MESSPFNRRQWTSLSLRVTAKELSLVNKNKSSAIVEIFSKYQKAAEETNMEKKRSNTENL 60
Query: 61 SQHFRKGTLTVLKKKWENPGLGAESHTDSLRNSSTEIRHRADHPPAEVTSHAASGAKADQ 120
SQHFRKGTLTVLKKKWENPGLGAESHTDSLRNSSTEIRHRADHPPAEVTSHAASGAKADQ
Sbjct: 61 SQHFRKGTLTVLKKKWENPGLGAESHTDSLRNSSTEIRHRADHPPAEVTSHAASGAKADQ 120
Query: 121 EEQIHPRSRLRSPPEALVQGRYPHIKDGEDLKDHSTESKKMENCLGESRHEVEKSEISEN 180
EEQIHPRSRLRSPPEALVQGRYPHIKDGEDLKDHSTESKKMENCLGESRHEVEKSEISEN
Sbjct: 121 EEQIHPRSRLRSPPEALVQGRYPHIKDGEDLKDHSTESKKMENCLGESRHEVEKSEISEN 180
Query: 181 TDASGKIEKYNVPLNRLKMMFEKGEPTQTKILRAQSRSASGRKISENSYSLDDLEIGPGQ 240
TDASGKIEKYNVPLNRLKMMFEKGEPTQTKILRAQSRSASGRKISENSYSLDDLEIGPGQ
Sbjct: 181 TDASGKIEKYNVPLNRLKMMFEKGEPTQTKILRAQSRSASGRKISENSYSLDDLEIGPGQ 240
Query: 241 LSSSTFDSEKNESRRNLELPRLSETSIKDRMAKYQAAVSKQSSSTNYTNELKASGGEIKI 300
LSSSTFDSEKNESRRNLELPRLSETSIKDRMAKYQAAVSKQSSSTNYTNELKASGGEIKI
Sbjct: 241 LSSSTFDSEKNESRRNLELPRLSETSIKDRMAKYQAAVSKQSSSTNYTNELKASGGEIKI 300
Query: 301 HKMEQKENVPPGPEVCITHQEGEKISANENSLAVRSTPAEDDSPGDSQVKSEVQQPVHPK 360
HKMEQKENVPPGPEVCITHQEGEKISANENSLAVRSTPAEDDSPGDSQVKSEVQQPVHPK
Sbjct: 301 HKMEQKENVPPGPEVCITHQEGEKISANENSLAVRSTPAEDDSPGDSQVKSEVQQPVHPK 360
Query: 361 PLSPDSRASSLSESSPPKAMKKFQAPARETCVECQKTVYPMERLLANQQVFHISCFRCSY 420
PLSPDSRASSLSESSPPKAMKKFQAPARETCVECQKTVYPMERLLANQQVFHISCFRCSY
Sbjct: 361 PLSPDSRASSLSESSPPKAMKKFQAPARETCVECQKTVYPMERLLANQQVFHISCFRCSY 420
Query: 421 CNNKLSLGTYASLHGRIYCKPHFNQLFKSKGNYDEGFGHRPHKDLWASKNENEEILERPA 480
CNNKLSLGTYASLHGRIYCKPHFNQLFKSKGNYDEGFGHRPHKDLWASKNENEEILERPA
Sbjct: 421 CNNKLSLGTYASLHGRIYCKPHFNQLFKSKGNYDEGFGHRPHKDLWASKNENEEILERPA 480
Query: 481 QLANARETPHSPGVEDAPIAKVGVLAASMEAKASSQQEKEDKPAETKKLRIAWPPPTELG 540
QLANARETPHSPGVEDAPIAKVGVLAASMEAKASSQQEKEDKPAETKKLRIAWPPPTELG
Sbjct: 481 QLANARETPHSPGVEDAPIAKVGVLAASMEAKASSQQEKEDKPAETKKLRIAWPPPTELG 540
Query: 541 SSGSALEEGIKMSKPKWPPEDEISKPEVPEDVDLDLKKLRRSSSLKERSRPFTVAASFQS 600
SSGSALEEGIKMSKPKWPPEDEISKPEVPEDVDLDLKKLRRSSSLKERSRPFTVAASFQS
Sbjct: 541 SSGSALEEGIKMSKPKWPPEDEISKPEVPEDVDLDLKKLRRSSSLKERSRPFTVAASFQS 600
Query: 601 TSVKSPKTVSPPIRKGWSMSEQSEESVGGRVAERKQVENAKASKKNGNVGKTTWQNKESK 660
TSVKSPKTVSPPIRKGWSMSEQSEESVGGRVAERKQVENAKASKKNGNVGKTTWQNKESK
Sbjct: 601 TSVKSPKTVSPPIRKGWSMSEQSEESVGGRVAERKQVENAKASKKNGNVGKTTWQNKESK 660
Query: 661 GETGKRSKEGHSLEMENENLVENGADSDEDDNSFLKQQSPQEPKSLNWSSFVDNTFAEEF 720
GETGKRSKEGHSLEMENENLVENGADSDEDDNSFLKQQSPQEPKSLNWSSFVDNTFAEEF
Sbjct: 661 GETGKRSKEGHSLEMENENLVENGADSDEDDNSFLKQQSPQEPKSLNWSSFVDNTFAEEF 720
Query: 721 TTQNQKSQDVELWEGEVVKELSVEEQIKRNRYYDEDEDEE 760
TTQNQKSQDVELWEGEVVKELSVEEQIKRNRYYDEDEDEE
Sbjct: 721 TTQNQKSQDVELWEGEVVKELSVEEQIKRNRYYDEDEDEE 760
>gi|7705373 LIM domain and actin binding 1 isoform b [Homo sapiens]
Length = 759
Score = 1509 bits (3908), Expect = 0.0
Identities = 758/760 (99%), Positives = 758/760 (99%), Gaps = 1/760 (0%)
Query: 1 MESSPFNRRQWTSLSLRVTAKELSLVNKNKSSAIVEIFSKYQKAAEETNMEKKRSNTENL 60
MESSPFNRRQWTSLSLRVTAKELSLVNKNKSSAIVEIFSKYQKAAEETNMEKKRSNTENL
Sbjct: 1 MESSPFNRRQWTSLSLRVTAKELSLVNKNKSSAIVEIFSKYQKAAEETNMEKKRSNTENL 60
Query: 61 SQHFRKGTLTVLKKKWENPGLGAESHTDSLRNSSTEIRHRADHPPAEVTSHAASGAKADQ 120
SQHFRKGTLTVLKKKWENPGLGAESHTDSLRNSSTEIRHRADHPPAEVTSHAASGAKADQ
Sbjct: 61 SQHFRKGTLTVLKKKWENPGLGAESHTDSLRNSSTEIRHRADHPPAEVTSHAASGAKADQ 120
Query: 121 EEQIHPRSRLRSPPEALVQGRYPHIKDGEDLKDHSTESKKMENCLGESRHEVEKSEISEN 180
EEQIHPRSRLRSPPEALVQGRYPHIKDGEDLKDHSTESKKMENCLGESRHEVEKSEISEN
Sbjct: 121 EEQIHPRSRLRSPPEALVQGRYPHIKDGEDLKDHSTESKKMENCLGESRHEVEKSEISEN 180
Query: 181 TDASGKIEKYNVPLNRLKMMFEKGEPTQTKILRAQSRSASGRKISENSYSLDDLEIGPGQ 240
TDASGKIEKYNVPLNRLKMMFEKGEPTQTKILRAQSRSASGRKISENSYSLDDLEIGPGQ
Sbjct: 181 TDASGKIEKYNVPLNRLKMMFEKGEPTQTKILRAQSRSASGRKISENSYSLDDLEIGPGQ 240
Query: 241 LSSSTFDSEKNESRRNLELPRLSETSIKDRMAKYQAAVSKQSSSTNYTNELKASGGEIKI 300
LSSSTFDSEKNESRRNLELPRLSETSIKDRMAKYQAAVSKQSSSTNYTNELKASGGEIKI
Sbjct: 241 LSSSTFDSEKNESRRNLELPRLSETSIKDRMAKYQAAVSKQSSSTNYTNELKASGGEIKI 300
Query: 301 HKMEQKENVPPGPEVCITHQEGEKISANENSLAVRSTPAEDDSPGDSQVKSEVQQPVHPK 360
HKMEQKENVPPGPEVCITHQEGEKISANENSLAVRSTPAEDDS DSQVKSEVQQPVHPK
Sbjct: 301 HKMEQKENVPPGPEVCITHQEGEKISANENSLAVRSTPAEDDSR-DSQVKSEVQQPVHPK 359
Query: 361 PLSPDSRASSLSESSPPKAMKKFQAPARETCVECQKTVYPMERLLANQQVFHISCFRCSY 420
PLSPDSRASSLSESSPPKAMKKFQAPARETCVECQKTVYPMERLLANQQVFHISCFRCSY
Sbjct: 360 PLSPDSRASSLSESSPPKAMKKFQAPARETCVECQKTVYPMERLLANQQVFHISCFRCSY 419
Query: 421 CNNKLSLGTYASLHGRIYCKPHFNQLFKSKGNYDEGFGHRPHKDLWASKNENEEILERPA 480
CNNKLSLGTYASLHGRIYCKPHFNQLFKSKGNYDEGFGHRPHKDLWASKNENEEILERPA
Sbjct: 420 CNNKLSLGTYASLHGRIYCKPHFNQLFKSKGNYDEGFGHRPHKDLWASKNENEEILERPA 479
Query: 481 QLANARETPHSPGVEDAPIAKVGVLAASMEAKASSQQEKEDKPAETKKLRIAWPPPTELG 540
QLANARETPHSPGVEDAPIAKVGVLAASMEAKASSQQEKEDKPAETKKLRIAWPPPTELG
Sbjct: 480 QLANARETPHSPGVEDAPIAKVGVLAASMEAKASSQQEKEDKPAETKKLRIAWPPPTELG 539
Query: 541 SSGSALEEGIKMSKPKWPPEDEISKPEVPEDVDLDLKKLRRSSSLKERSRPFTVAASFQS 600
SSGSALEEGIKMSKPKWPPEDEISKPEVPEDVDLDLKKLRRSSSLKERSRPFTVAASFQS
Sbjct: 540 SSGSALEEGIKMSKPKWPPEDEISKPEVPEDVDLDLKKLRRSSSLKERSRPFTVAASFQS 599
Query: 601 TSVKSPKTVSPPIRKGWSMSEQSEESVGGRVAERKQVENAKASKKNGNVGKTTWQNKESK 660
TSVKSPKTVSPPIRKGWSMSEQSEESVGGRVAERKQVENAKASKKNGNVGKTTWQNKESK
Sbjct: 600 TSVKSPKTVSPPIRKGWSMSEQSEESVGGRVAERKQVENAKASKKNGNVGKTTWQNKESK 659
Query: 661 GETGKRSKEGHSLEMENENLVENGADSDEDDNSFLKQQSPQEPKSLNWSSFVDNTFAEEF 720
GETGKRSKEGHSLEMENENLVENGADSDEDDNSFLKQQSPQEPKSLNWSSFVDNTFAEEF
Sbjct: 660 GETGKRSKEGHSLEMENENLVENGADSDEDDNSFLKQQSPQEPKSLNWSSFVDNTFAEEF 719
Query: 721 TTQNQKSQDVELWEGEVVKELSVEEQIKRNRYYDEDEDEE 760
TTQNQKSQDVELWEGEVVKELSVEEQIKRNRYYDEDEDEE
Sbjct: 720 TTQNQKSQDVELWEGEVVKELSVEEQIKRNRYYDEDEDEE 759
>gi|165905591 LIM domain and actin binding 1 isoform c [Homo
sapiens]
Length = 600
Score = 1202 bits (3111), Expect = 0.0
Identities = 600/600 (100%), Positives = 600/600 (100%)
Query: 161 MENCLGESRHEVEKSEISENTDASGKIEKYNVPLNRLKMMFEKGEPTQTKILRAQSRSAS 220
MENCLGESRHEVEKSEISENTDASGKIEKYNVPLNRLKMMFEKGEPTQTKILRAQSRSAS
Sbjct: 1 MENCLGESRHEVEKSEISENTDASGKIEKYNVPLNRLKMMFEKGEPTQTKILRAQSRSAS 60
Query: 221 GRKISENSYSLDDLEIGPGQLSSSTFDSEKNESRRNLELPRLSETSIKDRMAKYQAAVSK 280
GRKISENSYSLDDLEIGPGQLSSSTFDSEKNESRRNLELPRLSETSIKDRMAKYQAAVSK
Sbjct: 61 GRKISENSYSLDDLEIGPGQLSSSTFDSEKNESRRNLELPRLSETSIKDRMAKYQAAVSK 120
Query: 281 QSSSTNYTNELKASGGEIKIHKMEQKENVPPGPEVCITHQEGEKISANENSLAVRSTPAE 340
QSSSTNYTNELKASGGEIKIHKMEQKENVPPGPEVCITHQEGEKISANENSLAVRSTPAE
Sbjct: 121 QSSSTNYTNELKASGGEIKIHKMEQKENVPPGPEVCITHQEGEKISANENSLAVRSTPAE 180
Query: 341 DDSPGDSQVKSEVQQPVHPKPLSPDSRASSLSESSPPKAMKKFQAPARETCVECQKTVYP 400
DDSPGDSQVKSEVQQPVHPKPLSPDSRASSLSESSPPKAMKKFQAPARETCVECQKTVYP
Sbjct: 181 DDSPGDSQVKSEVQQPVHPKPLSPDSRASSLSESSPPKAMKKFQAPARETCVECQKTVYP 240
Query: 401 MERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSKGNYDEGFGHR 460
MERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSKGNYDEGFGHR
Sbjct: 241 MERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSKGNYDEGFGHR 300
Query: 461 PHKDLWASKNENEEILERPAQLANARETPHSPGVEDAPIAKVGVLAASMEAKASSQQEKE 520
PHKDLWASKNENEEILERPAQLANARETPHSPGVEDAPIAKVGVLAASMEAKASSQQEKE
Sbjct: 301 PHKDLWASKNENEEILERPAQLANARETPHSPGVEDAPIAKVGVLAASMEAKASSQQEKE 360
Query: 521 DKPAETKKLRIAWPPPTELGSSGSALEEGIKMSKPKWPPEDEISKPEVPEDVDLDLKKLR 580
DKPAETKKLRIAWPPPTELGSSGSALEEGIKMSKPKWPPEDEISKPEVPEDVDLDLKKLR
Sbjct: 361 DKPAETKKLRIAWPPPTELGSSGSALEEGIKMSKPKWPPEDEISKPEVPEDVDLDLKKLR 420
Query: 581 RSSSLKERSRPFTVAASFQSTSVKSPKTVSPPIRKGWSMSEQSEESVGGRVAERKQVENA 640
RSSSLKERSRPFTVAASFQSTSVKSPKTVSPPIRKGWSMSEQSEESVGGRVAERKQVENA
Sbjct: 421 RSSSLKERSRPFTVAASFQSTSVKSPKTVSPPIRKGWSMSEQSEESVGGRVAERKQVENA 480
Query: 641 KASKKNGNVGKTTWQNKESKGETGKRSKEGHSLEMENENLVENGADSDEDDNSFLKQQSP 700
KASKKNGNVGKTTWQNKESKGETGKRSKEGHSLEMENENLVENGADSDEDDNSFLKQQSP
Sbjct: 481 KASKKNGNVGKTTWQNKESKGETGKRSKEGHSLEMENENLVENGADSDEDDNSFLKQQSP 540
Query: 701 QEPKSLNWSSFVDNTFAEEFTTQNQKSQDVELWEGEVVKELSVEEQIKRNRYYDEDEDEE 760
QEPKSLNWSSFVDNTFAEEFTTQNQKSQDVELWEGEVVKELSVEEQIKRNRYYDEDEDEE
Sbjct: 541 QEPKSLNWSSFVDNTFAEEFTTQNQKSQDVELWEGEVVKELSVEEQIKRNRYYDEDEDEE 600
>gi|119372315 xin actin-binding repeat containing 2 isoform 2 [Homo
sapiens]
Length = 938
Score = 222 bits (566), Expect = 9e-58
Identities = 204/734 (27%), Positives = 310/734 (42%), Gaps = 166/734 (22%)
Query: 65 RKGTLTVLKKKWENPGLGAESHTDSLRNSSTEIRHRADHPPAEVTSHAASGAKADQEEQI 124
+KG+L +L++KWE S + + HP SH + + + +
Sbjct: 5 QKGSLNLLRQKWE----------------SCDYQRSECHPR---DSHCTI-FQPQESKLL 44
Query: 125 HPRSRLRSPPEALVQGRYPHIKDGEDLKDHSTESK----KMENCLGESRHEVEKSEISEN 180
P + S P++L P+ GE++ E K K N R EV K + +
Sbjct: 45 APEGEVVSAPQSLDPTSLPY-STGEEMWSSKPEEKDSVDKSNNTREYGRPEVLKED---S 100
Query: 181 TDASGKIEKYNVPLNRLKMMFEKGEP---------TQTKILRAQSRSA------------ 219
+ +IE++++ L+ L+ +FE + + +I R+ A
Sbjct: 101 LSSRRRIERFSIALDELRSVFEAPKSGNKPAEYGGKEVEIERSLCSPAFKSHPGSQLEDS 160
Query: 220 ---SGRKISENSYSLDDLEIGPGQLSSSTFDSEKNES-------RRNLELPRLSET-SIK 268
S +K E S+ E G ++ +T K ES R + L E S+K
Sbjct: 161 VKDSDKKGKETSFDKMSPESGHSRIFEATAGPNKPESGFAEDSAARGEGVSDLHEVVSLK 220
Query: 269 DRMAKYQAAVSK---QSSSTNYTNELK---ASGGEIKIHKMEQKENVPP----------- 311
+RMA+YQAAVS+ +S S N E + GG K+ K + E
Sbjct: 221 ERMARYQAAVSRGDCRSFSANMMEESEMCAVPGGLAKVKKQFEDEITSSRNTFAQYQYQH 280
Query: 312 -------------------GPEVCITHQEGEKIS-------------------ANENSL- 332
E+ QEG K+ N+ S
Sbjct: 281 QNRSEQEAIHSSQVGTSRSSQEMARNEQEGSKVQKIDVHGTEMVSHLEKHTEEVNQASQF 340
Query: 333 ------AVRSTPAEDDSPGDSQ--VKSEVQQPVHPKPLSPDSRASSLSESSPPKAMKKFQ 384
V TP +++ P S +K + ++ K L D ++ P K +KK
Sbjct: 341 HQYVQETVIDTPEDEEIPKVSTKLLKEQFEKSAQEKILYSDKEMTT-----PAKQIKKLL 395
Query: 385 APARETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFN 444
+E C+ CQKTVYPME L+A++Q FH SCFRC +CN+KLSLG YASLHG+IYCKPHF
Sbjct: 396 LQDKEICILCQKTVYPMECLVADKQNFHKSCFRCHHCNSKLSLGNYASLHGQIYCKPHFK 455
Query: 445 QLFKSKGNYDEGFGHRPHKDLWASKNENEEI----LERPAQLANARETPHSPGVEDAPIA 500
QLFKSKGNYDEGFGH+ HKD W KN++ + E P N E PG + +
Sbjct: 456 QLFKSKGNYDEGFGHKQHKDRWNCKNQSRSVDFIPNEEPNMCKNIAENTLVPGDRNEHLD 515
Query: 501 KVGVLAASMEAKASSQQEKEDKPAETKKLRIAWPPPTELGSSGSALEEGIKMSKPKWPPE 560
+ Q+ K E KL++ WPP E+ EE +KMSKPKWPPE
Sbjct: 516 ---------AGNSEGQRNDLRKLGERGKLKVIWPPSKEIPKKTLPFEEELKMSKPKWPPE 566
Query: 561 -DEISKPEVPEDVDLDLKKLRRSSSLKERSRPFTVAASFQSTSVKSPKTVSPPIRKGWSM 619
+ PE + L+ + + ++ PF + QST V
Sbjct: 567 MTTLLSPEFKSESLLEDVRTPENKGQRQDHFPF-LQPYLQSTHVC--------------- 610
Query: 620 SEQSEESVGGRVAERKQVENAKASKKNGNVGKTTWQNKESKGETGKRSKEGHSLEMENEN 679
Q E+ +G + E K E K KK G+ Q++ S+ E K +++ +N N
Sbjct: 611 --QKEDVIG--IKEMKMPEGRKDEKKE---GRKNVQDRPSEAEDTKSNRKSAMDLNDNNN 663
Query: 680 LVENGADSDEDDNS 693
++ A+ ++++ +
Sbjct: 664 VIVQSAEKEKNEKT 677
>gi|13386490 LIM domain containing 2 [Homo sapiens]
Length = 127
Score = 141 bits (355), Expect = 3e-33
Identities = 63/98 (64%), Positives = 76/98 (77%), Gaps = 2/98 (2%)
Query: 374 SSPPKAMKKF--QAPARETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYA 431
SS + K F +A +ETC CQKTVYPMERL+A++ +FH SCF C +C+ KLSLG+YA
Sbjct: 21 SSTVQRSKSFSLRAQVKETCAACQKTVYPMERLVADKLIFHNSCFCCKHCHTKLSLGSYA 80
Query: 432 SLHGRIYCKPHFNQLFKSKGNYDEGFGHRPHKDLWASK 469
+LHG YCKPHF QLFKSKGNYDEGFG + HK+LWA K
Sbjct: 81 ALHGEFYCKPHFQQLFKSKGNYDEGFGRKQHKELWAHK 118
>gi|209862793 microtubule associated monoxygenase, calponin and LIM
domain containing 3 isoform 2 [Homo sapiens]
Length = 1073
Score = 70.9 bits (172), Expect = 4e-12
Identities = 37/98 (37%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 348 QVKSEVQQPVHPKPLSPDSRASSLSESSPPKAMKKFQAPARETCVECQKTVYPMERLLAN 407
Q+ +++Q+ PK L S+ + P +TC CQK VY MERL A
Sbjct: 851 QIANQLQRKEQPKALLDKKELGSMKKEFPQNL------GGSDTCYFCQKRVYVMERLSAE 904
Query: 408 QQVFHISCFRCSYCNNKLSLGTYA--SLHGRIYCKPHF 443
+ FH SCF+C YC L L YA G+ YCKPH+
Sbjct: 905 GKFFHRSCFKCEYCATTLRLSAYAYDIEDGKFYCKPHY 942
>gi|170172518 microtubule associated monoxygenase, calponin and LIM
domain containing 3 isoform 3 [Homo sapiens]
Length = 966
Score = 65.5 bits (158), Expect = 2e-10
Identities = 30/57 (52%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 389 ETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYA--SLHGRIYCKPHF 443
+TC CQK VY MERL A + FH SCF+C YC L L YA G+ YCKPH+
Sbjct: 762 DTCYFCQKRVYVMERLSAEGKFFHRSCFKCEYCATTLRLSAYAYDIEDGKFYCKPHY 818
>gi|209862789 microtubule associated monoxygenase, calponin and LIM
domain containing 3 isoform 1 [Homo sapiens]
Length = 2002
Score = 65.5 bits (158), Expect = 2e-10
Identities = 30/57 (52%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 389 ETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYA--SLHGRIYCKPHF 443
+TC CQK VY MERL A + FH SCF+C YC L L YA G+ YCKPH+
Sbjct: 762 DTCYFCQKRVYVMERLSAEGKFFHRSCFKCEYCATTLRLSAYAYDIEDGKFYCKPHY 818
>gi|7662284 microtubule associated monoxygenase, calponin and LIM
domain containing 2 [Homo sapiens]
Length = 1124
Score = 64.7 bits (156), Expect = 3e-10
Identities = 49/149 (32%), Positives = 62/149 (41%), Gaps = 17/149 (11%)
Query: 365 DSRASSLSESSPPKAMKK---FQAPARETCVECQKTVYPMERLLANQQVFHISCFRCSYC 421
D R + + S ++M+K +TC C+K VY MERL A FH CFRCS C
Sbjct: 973 DHRPKAQATSPDLESMRKSFPLNLGGSDTCYFCKKRVYVMERLSAEGHFFHRECFRCSIC 1032
Query: 422 NNKLSLGTYA--SLHGRIYCKPHFNQLFKSKGNYDEGFGHRPHKDLWASKNENEEILERP 479
L L Y G+ YCKPHF K N + K K + EE
Sbjct: 1033 ATTLRLAAYTFDCDEGKFYCKPHF---IHCKTN------SKQRKRRAELKQQREEEATWQ 1083
Query: 480 AQLANARETPHSPGVEDAPIAKVGVLAAS 508
Q A R+TP +A +G L S
Sbjct: 1084 EQEAPRRDTPTE---SSCAVAAIGTLEGS 1109
>gi|33667117 MICAL-like 2 isoform 1 [Homo sapiens]
Length = 904
Score = 60.1 bits (144), Expect = 8e-09
Identities = 69/261 (26%), Positives = 98/261 (37%), Gaps = 34/261 (13%)
Query: 339 AEDDSPGDSQVKSEVQQ-------PVHPKPLSPDS------RASSLSESSPPKAMKKFQA 385
+ED S K+ VQ P PLSP R + + PPK +
Sbjct: 122 SEDSEEEPSGKKAPVQAAKLPSPAPARKPPLSPAQTNPVVQRRNEGAGGPPPKTDQALAG 181
Query: 386 P-ARETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASL--HGRIYCKPH 442
TC C K V+ ++R LA+ +++H SCFRC C+ L G Y + G C H
Sbjct: 182 SLVSSTCGVCGKHVHLVQRHLADGRLYHRSCFRCKQCSCTLHSGAYKATGEPGTFVCTSH 241
Query: 443 FNQLFKSKGNYDEGFGHRPHKDLWASKNENEEILERPAQLAN-ARETPHSPGVEDAPIAK 501
+ G P + + + AQ AN AR + P ++P A+
Sbjct: 242 LPAAASASPKLT---GLVPRQPGAMGVDSRTSCSPQKAQEANKARPSAWEPAAGNSP-AR 297
Query: 502 VGVLAASMEAKASSQQEKEDKPAETKKLRIAWPPPTE------------LGSSGSALEEG 549
V AA A S+ PA + R+A P PTE +G S +A
Sbjct: 298 ASVPAAPNPAATSATSVHVRSPARPSESRLA-PTPTEGKVRPRVTNSSPMGWSSAAPCTA 356
Query: 550 IKMSKPKWPPEDEISKPEVPE 570
S P PP +P P+
Sbjct: 357 AAASHPAVPPSAPDPRPATPQ 377
>gi|189083753 cysteine and glycine-rich protein 3 [Homo sapiens]
Length = 194
Score = 54.3 bits (129), Expect = 4e-07
Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 359 PKPLSPDSRASSLSESSPPKAMKKFQAPARETCVECQKTVYPMERLLANQQVFHISCFRC 418
PKP A S++ S+P K KF E C C K+VY E+++ + +H +CFRC
Sbjct: 96 PKP------ARSVTTSNPSKFTAKFGES--EKCPRCGKSVYAAEKVMGGGKPWHKTCFRC 147
Query: 419 SYCNNKLSLGTYASLHGRIYCKPHFNQLFKSKGNYDEGFG 458
+ C L G +YCK + + F G GFG
Sbjct: 148 AICGKSLESTNVTDKDGELYCKVCYAKNFGPTG---IGFG 184
Score = 53.9 bits (128), Expect = 5e-07
Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 391 CVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSK 450
C C+KTVY E + N + FH +CF C C L T A+ IYCK + + + K
Sbjct: 10 CGACEKTVYHAEEIQCNGRSFHKTCFHCMACRKALDSTTVAAHESEIYCKVCYGRRYGPK 69
Query: 451 G-NYDEGFG 458
G Y +G G
Sbjct: 70 GIGYGQGAG 78
>gi|4502893 cysteine and glycine-rich protein 3 [Homo sapiens]
Length = 194
Score = 54.3 bits (129), Expect = 4e-07
Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 359 PKPLSPDSRASSLSESSPPKAMKKFQAPARETCVECQKTVYPMERLLANQQVFHISCFRC 418
PKP A S++ S+P K KF E C C K+VY E+++ + +H +CFRC
Sbjct: 96 PKP------ARSVTTSNPSKFTAKFGES--EKCPRCGKSVYAAEKVMGGGKPWHKTCFRC 147
Query: 419 SYCNNKLSLGTYASLHGRIYCKPHFNQLFKSKGNYDEGFG 458
+ C L G +YCK + + F G GFG
Sbjct: 148 AICGKSLESTNVTDKDGELYCKVCYAKNFGPTG---IGFG 184
Score = 53.9 bits (128), Expect = 5e-07
Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 391 CVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSK 450
C C+KTVY E + N + FH +CF C C L T A+ IYCK + + + K
Sbjct: 10 CGACEKTVYHAEEIQCNGRSFHKTCFHCMACRKALDSTTVAAHESEIYCKVCYGRRYGPK 69
Query: 451 G-NYDEGFG 458
G Y +G G
Sbjct: 70 GIGYGQGAG 78
>gi|4758086 cysteine and glycine-rich protein 1 isoform 1 [Homo
sapiens]
Length = 193
Score = 53.5 bits (127), Expect = 7e-07
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 389 ETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFK 448
E C C + VY E+++ + +H +CFRC+ C L T A G IYCK + + F
Sbjct: 117 ERCPRCSQAVYAAEKVIGAGKSWHKACFRCAKCGKGLESTTLADKDGEIYCKGCYAKNFG 176
Query: 449 SKG-NYDEGFGHRPHKD 464
KG + +G G H +
Sbjct: 177 PKGFGFGQGAGALVHSE 193
Score = 49.7 bits (117), Expect = 1e-05
Identities = 27/69 (39%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 391 CVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSK 450
C CQKTVY E + FH SCF C C L T A IYCK + + + K
Sbjct: 10 CGVCQKTVYFAEEVQCEGNSFHKSCFLCMVCKKNLDSTTVAVHGEEIYCKSCYGKKYGPK 69
Query: 451 G-NYDEGFG 458
G Y +G G
Sbjct: 70 GYGYGQGAG 78
>gi|31324577 molecule interacting with Rab13 [Homo sapiens]
Length = 863
Score = 53.1 bits (126), Expect = 9e-07
Identities = 45/182 (24%), Positives = 74/182 (40%), Gaps = 16/182 (8%)
Query: 357 VHPKPLSPDSRASSLSESSPPKAMKKFQAPARETCVECQKTVYPMERLLANQQVFHISCF 416
V P P+ P+ A SS + + TC CQ+ V+ ++R LA+ +++H CF
Sbjct: 130 VAPTPVEPEDVAQGEELSSGSLSEQGTGQTPSSTCAACQQHVHLVQRYLADGRLYHRHCF 189
Query: 417 RCSYCNNKLSLGTYAS--LHGRIYCKPHFNQLFKSKGNYDEGFGHRPHKDLWASKNENEE 474
RC C++ L G Y + G C H +L + G RP + ++
Sbjct: 190 RCRRCSSTLLPGAYENGPEEGTFVCAEHCARLGPGTRS-----GTRPGPFSQPKQQHQQQ 244
Query: 475 ILERPAQLANARETPHSPGVEDAPIAKVGVLAASMEAKASSQQEKEDKPAETKKLRIAWP 534
+ E +A++ P AP G A +A ++ + KP KL+
Sbjct: 245 LAE------DAKDVPGGGPSSSAP---AGAEADGPKASPEARPQIPTKPRVPGKLQELAS 295
Query: 535 PP 536
PP
Sbjct: 296 PP 297
>gi|4503101 cysteine and glycine-rich protein 2 [Homo sapiens]
Length = 193
Score = 53.1 bits (126), Expect = 9e-07
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 389 ETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFK 448
E C C +VY E+++ + +H +CFRC+ C L T G IYCK + + F
Sbjct: 117 EKCSRCGDSVYAAEKIIGAGKPWHKNCFRCAKCGKSLESTTLTEKEGEIYCKGCYAKNFG 176
Query: 449 SKG-NYDEGFGHRPH 462
KG Y +G G H
Sbjct: 177 PKGFGYGQGAGALVH 191
Score = 46.2 bits (108), Expect = 1e-04
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 391 CVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSK 450
C C +TVY E + + + FH CF C C L T A IYCK + + + K
Sbjct: 10 CGACGRTVYHAEEVQCDGRSFHRCCFLCMVCRKNLDSTTVAIHDEEIYCKSCYGKKYGPK 69
Query: 451 G-NYDEGFG 458
G Y +G G
Sbjct: 70 GYGYGQGAG 78
>gi|4503049 cysteine-rich protein 2 [Homo sapiens]
Length = 208
Score = 52.4 bits (124), Expect = 2e-06
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Query: 364 PDSRASSLSESSPPKAMKKFQAPAR-----ETCVECQKTVYPMERLLANQQVFHISCFRC 418
P +RA S PPK + + TC C K VY E++ + + +H C RC
Sbjct: 94 PAARAEERKASGPPKGPSRASSVTTFTGEPNTCPRCSKKVYFAEKVTSLGKDWHRPCLRC 153
Query: 419 SYCNNKLSLGTYASLHGRIYC-KPHFNQLFKSKG 451
C L+ G +A G+ YC KP + LF KG
Sbjct: 154 ERCGKTLTPGGHAEHDGQPYCHKPCYGILFGPKG 187
Score = 47.8 bits (112), Expect = 4e-05
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Query: 391 CVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYC-KPHFNQLFKS 449
C +C KTVY E++ + + +H C +C C+ L+ G +A G+ +C KP + LF
Sbjct: 5 CPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATLFGP 64
Query: 450 KGNYDEGFGHRPHKDLWASKNENEEILERPAQLANARETPHSP 492
KG G G ++ A + +E PA A R+ P
Sbjct: 65 KGVNIGGAGSYIYEKPLAEGPQVTGPIEVPAARAEERKASGPP 107
>gi|66932986 filamin-binding LIM protein-1 isoform b [Homo sapiens]
Length = 374
Score = 52.0 bits (123), Expect = 2e-06
Identities = 39/153 (25%), Positives = 60/153 (39%), Gaps = 19/153 (12%)
Query: 310 PPGPEVCITHQE------GEKISANENSLAVRSTPAEDDSPGDSQVKSEVQQPVHPKPLS 363
PP P V + +E G + A+ L + P +P + V P PL
Sbjct: 108 PPPPPVLLPSEEEAPAPMGASLIADLEQLHLSPPPPPPQAPAEGP-------SVQPGPLR 160
Query: 364 PDSRASSLSESSPPKAMKKFQAPARETCVECQKTVYPMERLL-ANQQVFHISCFRCSYCN 422
P E PP A + + + C C KTV P E + A ++ +H CF C C
Sbjct: 161 PMEE-----ELPPPPAEPVEKGASTDICAFCHKTVSPRELAVEAMKRQYHAQCFTCRTCR 215
Query: 423 NKLSLGTYASLHGRIYCKPHFNQLFKSKGNYDE 455
+L+ ++ GR C+P + + G E
Sbjct: 216 RQLAGQSFYQKDGRPLCEPCYQDTLERCGKCGE 248
>gi|66932982 filamin-binding LIM protein-1 isoform a [Homo sapiens]
Length = 373
Score = 52.0 bits (123), Expect = 2e-06
Identities = 39/153 (25%), Positives = 60/153 (39%), Gaps = 19/153 (12%)
Query: 310 PPGPEVCITHQE------GEKISANENSLAVRSTPAEDDSPGDSQVKSEVQQPVHPKPLS 363
PP P V + +E G + A+ L + P +P + V P PL
Sbjct: 108 PPPPPVLLPSEEEAPAPMGASLIADLEQLHLSPPPPPPQAPAEGP-------SVQPGPLR 160
Query: 364 PDSRASSLSESSPPKAMKKFQAPARETCVECQKTVYPMERLL-ANQQVFHISCFRCSYCN 422
P E PP A + + + C C KTV P E + A ++ +H CF C C
Sbjct: 161 PMEE-----ELPPPPAEPVEKGASTDICAFCHKTVSPRELAVEAMKRQYHAQCFTCRTCR 215
Query: 423 NKLSLGTYASLHGRIYCKPHFNQLFKSKGNYDE 455
+L+ ++ GR C+P + + G E
Sbjct: 216 RQLAGQSFYQKDGRPLCEPCYQDTLERCGKCGE 248
>gi|40804748 LIM and senescent cell antigen-like domains 2 isoform 2
[Homo sapiens]
Length = 365
Score = 50.8 bits (120), Expect = 5e-06
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 373 ESSPPKAMKKFQAPARETCVECQKTVYPMERLL-ANQQVFHISCFRCSYCNNKLSLGTYA 431
+S PP A A C CQ P ER++ +N +++H CF C+ C G +
Sbjct: 21 QSPPPATGNMSDALANAVCQRCQARFSPAERIVNSNGELYHEHCFVCAQCFRPFPEGLFY 80
Query: 432 SLHGRIYCKPHFNQLF 447
GR YC+ F LF
Sbjct: 81 EFEGRKYCEHDFQMLF 96
Score = 32.0 bits (71), Expect = 2.2
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Query: 391 CVECQKTVYPMERLLANQ--QVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLF 447
C C++ P+E + N + +H+ F C+ C + G YC+ H+NQLF
Sbjct: 222 CGACRR---PIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLF 277
Score = 30.4 bits (67), Expect = 6.4
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 411 FHISCFRCSYCNNKLSLGTYASLHGRIYCKP-HFNQLFKSKGNY 453
+H CFRC C+ +L+ + GR C+P H + K G Y
Sbjct: 119 WHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGLGKY 162
>gi|205360947 microtubule associated monoxygenase, calponin and LIM
domain containing 1 isoform 1 [Homo sapiens]
Length = 1067
Score = 50.4 bits (119), Expect = 6e-06
Identities = 36/120 (30%), Positives = 48/120 (40%), Gaps = 8/120 (6%)
Query: 339 AEDDSPGDSQVKSEVQQPVHPKPLSPDSRASSLSESSPPKAMKKFQAPARETCVECQKTV 398
AED +++ E + P P P+ +PP + +A A + C C + +
Sbjct: 651 AEDAGGKKLRLEMEAETPSTEVPPDPEPGVPL----TPPSQHQ--EAGAGDLCALCGEHL 704
Query: 399 YPMERLLANQQVFHISCFRCSYCNNKLSLGTYASL--HGRIYCKPHFNQLFKSKGNYDEG 456
Y +ERL N FH SCFRC C L G Y G YC H Q D G
Sbjct: 705 YVLERLCVNGHFFHRSCFRCHTCEATLWPGGYEQHPGDGHFYCLQHLPQTDHKAEGSDRG 764
>gi|226530313 microtubule associated monoxygenase, calponin and LIM
domain containing 1 isoform 2 [Homo sapiens]
Length = 981
Score = 50.4 bits (119), Expect = 6e-06
Identities = 36/120 (30%), Positives = 48/120 (40%), Gaps = 8/120 (6%)
Query: 339 AEDDSPGDSQVKSEVQQPVHPKPLSPDSRASSLSESSPPKAMKKFQAPARETCVECQKTV 398
AED +++ E + P P P+ +PP + +A A + C C + +
Sbjct: 565 AEDAGGKKLRLEMEAETPSTEVPPDPEPGVPL----TPPSQHQ--EAGAGDLCALCGEHL 618
Query: 399 YPMERLLANQQVFHISCFRCSYCNNKLSLGTYASL--HGRIYCKPHFNQLFKSKGNYDEG 456
Y +ERL N FH SCFRC C L G Y G YC H Q D G
Sbjct: 619 YVLERLCVNGHFFHRSCFRCHTCEATLWPGGYEQHPGDGHFYCLQHLPQTDHKAEGSDRG 678
>gi|221316627 cysteine and glycine-rich protein 1 isoform 2 [Homo
sapiens]
Length = 140
Score = 49.7 bits (117), Expect = 1e-05
Identities = 27/69 (39%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 391 CVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSK 450
C CQKTVY E + FH SCF C C L T A IYCK + + + K
Sbjct: 10 CGVCQKTVYFAEEVQCEGNSFHKSCFLCMVCKKNLDSTTVAVHGEEIYCKSCYGKKYGPK 69
Query: 451 G-NYDEGFG 458
G Y +G G
Sbjct: 70 GYGYGQGAG 78
>gi|116517305 cysteine-rich protein 3 [Homo sapiens]
Length = 204
Score = 48.5 bits (114), Expect = 2e-05
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 5/99 (5%)
Query: 356 PVHPKPLSPDSRASSLSES--SPPKAMKKFQAPARETCVECQKTVYPMERLLANQQVFHI 413
P+ P SP + L + SPP MK F C C + VY E++++ + +H
Sbjct: 89 PLSPSSFSPPRPRTGLPQGKKSPPH-MKTFTGET-SLCPGCGEPVYFAEKVMSLGRNWHR 146
Query: 414 SCFRCSYCNNKLSLGTYASLHGRIYCK-PHFNQLFKSKG 451
C RC C+ L+ G++A G YC P + LF KG
Sbjct: 147 PCLRCQRCHKTLTAGSHAEHDGVPYCHVPCYGYLFGPKG 185
Score = 47.0 bits (110), Expect = 7e-05
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 390 TCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYC-KPHFNQLFK 448
TC CQ+ V+ E++ + + +H C +C C++ LS G +A +GR YC KP + LF
Sbjct: 4 TCPRCQQPVFFAEKVSSLGKNWHRFCLKCERCHSILSPGGHAEHNGRPYCHKPCYGALFG 63
Query: 449 SKGNYDEGFG 458
+G G G
Sbjct: 64 PRGVNIGGVG 73
>gi|5453710 LIM and SH3 protein 1 [Homo sapiens]
Length = 261
Score = 47.0 bits (110), Expect = 7e-05
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Query: 391 CVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHF-NQLFKS 449
C C K VYP E++ + +H +CF C C L++ Y + YC H+ Q F
Sbjct: 5 CARCGKIVYPTEKVNCLDKFWHKACFHCETCKMTLNMKNYKGYEKKPYCNAHYPKQSFTM 64
Query: 450 KGNYDEGFGHRPHKDLWASKNENEE 474
+ E + +L + EE
Sbjct: 65 VADTPENLRLKQQSELQSQVRYKEE 89
>gi|47087157 nebulette non-muscle isoform [Homo sapiens]
Length = 270
Score = 47.0 bits (110), Expect = 7e-05
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 391 CVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHF 443
C C K VYP E++ + +H CF C C L++ Y + YC H+
Sbjct: 5 CARCGKVVYPTEKVNCLDKYWHKGCFHCEVCKMALNMNNYKGYEKKPYCNAHY 57
>gi|239741720 PREDICTED: hypothetical protein XP_002342298 [Homo
sapiens]
Length = 248
Score = 46.6 bits (109), Expect = 9e-05
Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 13/117 (11%)
Query: 344 PGDSQVKSEVQQPVHPKPLSPDSRASSLSES--SPPKAMKKF----------QAPARETC 391
P + ++ VH + D RA S + S K K+F A A TC
Sbjct: 13 PENEEIPRAALNTVHEANGTEDERAVSKLQRRHSDVKVYKEFCDFYAKFNMANALASATC 72
Query: 392 VECQKTVYPMERLL-ANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLF 447
C+ P E ++ +N +++H CF C+ C + G + GR YC+ F LF
Sbjct: 73 ERCKGGFAPAETIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLF 129
>gi|238859658 LIM and senescent cell antigen-like domains 2 isoform
1 [Homo sapiens]
Length = 363
Score = 46.2 bits (108), Expect = 1e-04
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 385 APARETCVECQKTVYPMERLL-ANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHF 443
A A C CQ P ER++ +N +++H CF C+ C G + GR YC+ F
Sbjct: 31 ALANAVCQRCQARFSPAERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDF 90
Query: 444 NQLF 447
LF
Sbjct: 91 QMLF 94
Score = 32.0 bits (71), Expect = 2.2
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Query: 391 CVECQKTVYPMERLLANQ--QVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLF 447
C C++ P+E + N + +H+ F C+ C + G YC+ H+NQLF
Sbjct: 220 CGACRR---PIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLF 275
Score = 30.4 bits (67), Expect = 6.4
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 411 FHISCFRCSYCNNKLSLGTYASLHGRIYCKP-HFNQLFKSKGNY 453
+H CFRC C+ +L+ + GR C+P H + K G Y
Sbjct: 117 WHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGLGKY 160
>gi|238776788 LIM and senescent cell antigen-like domains 2 isoform
5 [Homo sapiens]
Length = 336
Score = 46.2 bits (108), Expect = 1e-04
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 385 APARETCVECQKTVYPMERLL-ANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHF 443
A A C CQ P ER++ +N +++H CF C+ C G + GR YC+ F
Sbjct: 4 ALANAVCQRCQARFSPAERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDF 63
Query: 444 NQLF 447
LF
Sbjct: 64 QMLF 67
Score = 32.0 bits (71), Expect = 2.2
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Query: 391 CVECQKTVYPMERLLANQ--QVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLF 447
C C++ P+E + N + +H+ F C+ C + G YC+ H+NQLF
Sbjct: 193 CGACRR---PIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLF 248
Score = 30.4 bits (67), Expect = 6.4
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 411 FHISCFRCSYCNNKLSLGTYASLHGRIYCKP-HFNQLFKSKGNY 453
+H CFRC C+ +L+ + GR C+P H + K G Y
Sbjct: 90 WHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGLGKY 133
>gi|238776786 LIM and senescent cell antigen-like domains 2 isoform
3 [Homo sapiens]
Length = 341
Score = 46.2 bits (108), Expect = 1e-04
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 385 APARETCVECQKTVYPMERLL-ANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHF 443
A A C CQ P ER++ +N +++H CF C+ C G + GR YC+ F
Sbjct: 9 ALANAVCQRCQARFSPAERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDF 68
Query: 444 NQLF 447
LF
Sbjct: 69 QMLF 72
Score = 32.0 bits (71), Expect = 2.2
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Query: 391 CVECQKTVYPMERLLANQ--QVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLF 447
C C++ P+E + N + +H+ F C+ C + G YC+ H+NQLF
Sbjct: 198 CGACRR---PIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLF 253
Score = 30.4 bits (67), Expect = 6.4
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 411 FHISCFRCSYCNNKLSLGTYASLHGRIYCKP-HFNQLFKSKGNY 453
+H CFRC C+ +L+ + GR C+P H + K G Y
Sbjct: 95 WHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGLGKY 138
>gi|46049092 nebulin-related anchoring protein isoform C [Homo
sapiens]
Length = 1695
Score = 46.2 bits (108), Expect = 1e-04
Identities = 18/54 (33%), Positives = 27/54 (50%)
Query: 389 ETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPH 442
+ C C VYP E++ Q++H +CF C C LS+ + S + YC H
Sbjct: 4 QPCSRCGYGVYPAEKISCIDQIWHKACFHCEVCKMMLSVNNFVSHQKKPYCHAH 57
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.305 0.123 0.342
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,398,676
Number of Sequences: 37866
Number of extensions: 1532709
Number of successful extensions: 6162
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 382
Number of HSP's that attempted gapping in prelim test: 5444
Number of HSP's gapped (non-prelim): 1140
length of query: 760
length of database: 18,247,518
effective HSP length: 110
effective length of query: 650
effective length of database: 14,082,258
effective search space: 9153467700
effective search space used: 9153467700
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.