Guide to the Human Genome
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Search of human proteins with 163644261

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|163644261 hypothetical protein LOC283638 isoform 1 [Homo
sapiens]
         (1554 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|163644261 hypothetical protein LOC283638 isoform 1 [Homo sapi...  3121   0.0  
gi|61742808 hypothetical protein LOC283638 isoform 2 [Homo sapiens]  2979   0.0  
gi|109255228 centrosomal protein 170kDa isoform alpha [Homo sapi...   659   0.0  
gi|109255230 centrosomal protein 170kDa isoform beta [Homo sapiens]   347   4e-95
gi|109255232 centrosomal protein 170kDa isoform gamma [Homo sapi...   347   4e-95
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]        76   2e-13
gi|56676397 ankyrin repeat domain 11 [Homo sapiens]                    68   8e-11
gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f...    65   5e-10
gi|57164975 Treacher Collins-Franceschetti syndrome 1 isoform b ...    65   5e-10
gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e...    63   2e-09
gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens]                63   2e-09
gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d...    62   4e-09
gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a ...    62   4e-09
gi|166706868 synaptopodin 2-like isoform a [Homo sapiens]              62   6e-09
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]         61   1e-08
gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens]                59   5e-08
gi|50301232 synaptopodin 2-like isoform b [Homo sapiens]               59   5e-08
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]         57   1e-07
gi|21314720 Smad nuclear interacting protein [Homo sapiens]            57   1e-07
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ...    57   1e-07
gi|18079216 CASK interacting protein 1 [Homo sapiens]                  57   2e-07
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi...    57   2e-07
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]     57   2e-07
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ...    56   3e-07
gi|178557734 microtubule-associated protein tau isoform 6 [Homo ...    55   4e-07
gi|73476377 LBXCOR1 homolog [Homo sapiens]                             55   4e-07
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]      55   5e-07
gi|157785645 SPEG complex locus [Homo sapiens]                         55   7e-07
gi|116268127 kinase non-catalytic C-lobe domain (KIND) containin...    55   7e-07
gi|239754955 PREDICTED: similar to COL22A1 protein [Homo sapiens]      54   9e-07

>gi|163644261 hypothetical protein LOC283638 isoform 1 [Homo sapiens]
          Length = 1554

 Score = 3121 bits (8091), Expect = 0.0
 Identities = 1554/1554 (100%), Positives = 1554/1554 (100%)

Query: 1    MSATSWFLVSSSGARHRLPRELIFVGREECELMLQSRSVDKQHAVINYDQDRDEHWVKDL 60
            MSATSWFLVSSSGARHRLPRELIFVGREECELMLQSRSVDKQHAVINYDQDRDEHWVKDL
Sbjct: 1    MSATSWFLVSSSGARHRLPRELIFVGREECELMLQSRSVDKQHAVINYDQDRDEHWVKDL 60

Query: 61   GSLNGTFVNDMRIPDQKYVTLKLNDVIRFGYDSNMYVLERVQHRVPEEALKHEKYTSQLQ 120
            GSLNGTFVNDMRIPDQKYVTLKLNDVIRFGYDSNMYVLERVQHRVPEEALKHEKYTSQLQ
Sbjct: 61   GSLNGTFVNDMRIPDQKYVTLKLNDVIRFGYDSNMYVLERVQHRVPEEALKHEKYTSQLQ 120

Query: 121  VSVKGLAPKRSEALPEHTPYCEASNPRPEKGDRRPGTEAASYRTPLYGQPSWWGEDDGST 180
            VSVKGLAPKRSEALPEHTPYCEASNPRPEKGDRRPGTEAASYRTPLYGQPSWWGEDDGST
Sbjct: 121  VSVKGLAPKRSEALPEHTPYCEASNPRPEKGDRRPGTEAASYRTPLYGQPSWWGEDDGST 180

Query: 181  LPDAQRQGEPYPERPKGPVQQDGELHGFRAPAEPQGCSFRREPSYFEIPTKETPQPSQPP 240
            LPDAQRQGEPYPERPKGPVQQDGELHGFRAPAEPQGCSFRREPSYFEIPTKETPQPSQPP
Sbjct: 181  LPDAQRQGEPYPERPKGPVQQDGELHGFRAPAEPQGCSFRREPSYFEIPTKETPQPSQPP 240

Query: 241  EVPAHEMPTKDAEAGGGGAAPVVQSHASFTIEFDDCSPGKMKIKDHITKFSLRQRRPPGK 300
            EVPAHEMPTKDAEAGGGGAAPVVQSHASFTIEFDDCSPGKMKIKDHITKFSLRQRRPPGK
Sbjct: 241  EVPAHEMPTKDAEAGGGGAAPVVQSHASFTIEFDDCSPGKMKIKDHITKFSLRQRRPPGK 300

Query: 301  EATPGEMVSAETKVADWLVQNDPSLLHRVGPGDDRHSTKSDLPVHTRTLKGHKHEDGTQS 360
            EATPGEMVSAETKVADWLVQNDPSLLHRVGPGDDRHSTKSDLPVHTRTLKGHKHEDGTQS
Sbjct: 301  EATPGEMVSAETKVADWLVQNDPSLLHRVGPGDDRHSTKSDLPVHTRTLKGHKHEDGTQS 360

Query: 361  DSEDPLAKAASAAGVPLEASGEQVRLQRQIKRDPQELLHNQQAFVIEFFDEDTPRKKRSQ 420
            DSEDPLAKAASAAGVPLEASGEQVRLQRQIKRDPQELLHNQQAFVIEFFDEDTPRKKRSQ
Sbjct: 361  DSEDPLAKAASAAGVPLEASGEQVRLQRQIKRDPQELLHNQQAFVIEFFDEDTPRKKRSQ 420

Query: 421  SFTHSPSGDPKADKRRGPTPADRDRPSVPAPVQAGGRSSGPQRAGSLKREKTEERLGSPS 480
            SFTHSPSGDPKADKRRGPTPADRDRPSVPAPVQAGGRSSGPQRAGSLKREKTEERLGSPS
Sbjct: 421  SFTHSPSGDPKADKRRGPTPADRDRPSVPAPVQAGGRSSGPQRAGSLKREKTEERLGSPS 480

Query: 481  PASRTPARPFGSVGRRSRLAQDFMAQCLRESSPAARPSPEKVPPVLPAPLTPHGTSPVGP 540
            PASRTPARPFGSVGRRSRLAQDFMAQCLRESSPAARPSPEKVPPVLPAPLTPHGTSPVGP
Sbjct: 481  PASRTPARPFGSVGRRSRLAQDFMAQCLRESSPAARPSPEKVPPVLPAPLTPHGTSPVGP 540

Query: 541  PTPPPAPTDPQLTKARKQEEDDSLSDAGTYTIETEAQDTEVEEARKMIDQVFGVLESPEL 600
            PTPPPAPTDPQLTKARKQEEDDSLSDAGTYTIETEAQDTEVEEARKMIDQVFGVLESPEL
Sbjct: 541  PTPPPAPTDPQLTKARKQEEDDSLSDAGTYTIETEAQDTEVEEARKMIDQVFGVLESPEL 600

Query: 601  SRASSATFRPVIRGDRDESDDGGVAQRMALLQEFASRPLGAAPQAEHQGLPVPGSPGGQK 660
            SRASSATFRPVIRGDRDESDDGGVAQRMALLQEFASRPLGAAPQAEHQGLPVPGSPGGQK
Sbjct: 601  SRASSATFRPVIRGDRDESDDGGVAQRMALLQEFASRPLGAAPQAEHQGLPVPGSPGGQK 660

Query: 661  WVSRWASLADSYSDPGLTEDGLGRRGGEPEGSLPVRMRRRLPQLPSERADSPAGPESSRR 720
            WVSRWASLADSYSDPGLTEDGLGRRGGEPEGSLPVRMRRRLPQLPSERADSPAGPESSRR
Sbjct: 661  WVSRWASLADSYSDPGLTEDGLGRRGGEPEGSLPVRMRRRLPQLPSERADSPAGPESSRR 720

Query: 721  SGPGPPELDSEQPSRLFGQEELDPDSLSDASGSDGGRGPEPGVEPQDSRRRSPQEGPTWS 780
            SGPGPPELDSEQPSRLFGQEELDPDSLSDASGSDGGRGPEPGVEPQDSRRRSPQEGPTWS
Sbjct: 721  SGPGPPELDSEQPSRLFGQEELDPDSLSDASGSDGGRGPEPGVEPQDSRRRSPQEGPTWS 780

Query: 781  RGRRSPRAPGEPTPASFFIGDQNGDAVLSRKPLAAPGDGEGLGQTAQPSPPARDGVYVSA 840
            RGRRSPRAPGEPTPASFFIGDQNGDAVLSRKPLAAPGDGEGLGQTAQPSPPARDGVYVSA
Sbjct: 781  RGRRSPRAPGEPTPASFFIGDQNGDAVLSRKPLAAPGDGEGLGQTAQPSPPARDGVYVSA 840

Query: 841  NGRMVIQLRPGRSPEPDGPAPAFLRQESFTKEPASGPPAPGKPPHISSHPLLQDLAATRA 900
            NGRMVIQLRPGRSPEPDGPAPAFLRQESFTKEPASGPPAPGKPPHISSHPLLQDLAATRA
Sbjct: 841  NGRMVIQLRPGRSPEPDGPAPAFLRQESFTKEPASGPPAPGKPPHISSHPLLQDLAATRA 900

Query: 901  ARMDFHSQDTHLILKETETALAALEARLLSNSVDAECEGGSTPRPPEDALSGDSDVDTAS 960
            ARMDFHSQDTHLILKETETALAALEARLLSNSVDAECEGGSTPRPPEDALSGDSDVDTAS
Sbjct: 901  ARMDFHSQDTHLILKETETALAALEARLLSNSVDAECEGGSTPRPPEDALSGDSDVDTAS 960

Query: 961  TVSLRSGKSGPSPTTPQPLRAQKEMSPSPPAAQDPGGTALVSAREQSSERQHHPLGPTDM 1020
            TVSLRSGKSGPSPTTPQPLRAQKEMSPSPPAAQDPGGTALVSAREQSSERQHHPLGPTDM
Sbjct: 961  TVSLRSGKSGPSPTTPQPLRAQKEMSPSPPAAQDPGGTALVSAREQSSERQHHPLGPTDM 1020

Query: 1021 GRGEPVRRSAIRRGHRPRGSLDWPSEERGPVLAHLPSSDVMASNHETPEATGAGRLGSRR 1080
            GRGEPVRRSAIRRGHRPRGSLDWPSEERGPVLAHLPSSDVMASNHETPEATGAGRLGSRR
Sbjct: 1021 GRGEPVRRSAIRRGHRPRGSLDWPSEERGPVLAHLPSSDVMASNHETPEATGAGRLGSRR 1080

Query: 1081 KPAAPPPSPAAREEQSRSSASSQKGPQALTRSNSLSTPRPTRASRLRRARLGDASDTEAA 1140
            KPAAPPPSPAAREEQSRSSASSQKGPQALTRSNSLSTPRPTRASRLRRARLGDASDTEAA
Sbjct: 1081 KPAAPPPSPAAREEQSRSSASSQKGPQALTRSNSLSTPRPTRASRLRRARLGDASDTEAA 1140

Query: 1141 DGERGSLGNPEPVGRPAAEQAKKLSRLDILAMPRKRAGSFTGTSDPEAAPARTSFSGRSV 1200
            DGERGSLGNPEPVGRPAAEQAKKLSRLDILAMPRKRAGSFTGTSDPEAAPARTSFSGRSV
Sbjct: 1141 DGERGSLGNPEPVGRPAAEQAKKLSRLDILAMPRKRAGSFTGTSDPEAAPARTSFSGRSV 1200

Query: 1201 ELCCASRKPTMAEARAVSRKAANTATTTGPRQPFSRARSGSARYTSTTQTPRAGSSSRAR 1260
            ELCCASRKPTMAEARAVSRKAANTATTTGPRQPFSRARSGSARYTSTTQTPRAGSSSRAR
Sbjct: 1201 ELCCASRKPTMAEARAVSRKAANTATTTGPRQPFSRARSGSARYTSTTQTPRAGSSSRAR 1260

Query: 1261 SRAPGPRDTDDDEEEPDPYGFIVQTAEIAEIARLSQTLVKDVAILAQEIHDVAGDGDTLG 1320
            SRAPGPRDTDDDEEEPDPYGFIVQTAEIAEIARLSQTLVKDVAILAQEIHDVAGDGDTLG
Sbjct: 1261 SRAPGPRDTDDDEEEPDPYGFIVQTAEIAEIARLSQTLVKDVAILAQEIHDVAGDGDTLG 1320

Query: 1321 SSEPAHSASLSNMPSTPASTISAREELVQRIPEASLNFQKVPPGSLNSRDFDQNMNDSCE 1380
            SSEPAHSASLSNMPSTPASTISAREELVQRIPEASLNFQKVPPGSLNSRDFDQNMNDSCE
Sbjct: 1321 SSEPAHSASLSNMPSTPASTISAREELVQRIPEASLNFQKVPPGSLNSRDFDQNMNDSCE 1380

Query: 1381 DALANKTRPRNREEVIFDNLMLNPVSQLSQAIRENTEHLAEKMKILFQNTGRAWEDLEAR 1440
            DALANKTRPRNREEVIFDNLMLNPVSQLSQAIRENTEHLAEKMKILFQNTGRAWEDLEAR
Sbjct: 1381 DALANKTRPRNREEVIFDNLMLNPVSQLSQAIRENTEHLAEKMKILFQNTGRAWEDLEAR 1440

Query: 1441 INAENEVPILKTSNKEISSILKELRRVQKQLEVINAIVDPSGSLDLLTGNRSLASSAQPG 1500
            INAENEVPILKTSNKEISSILKELRRVQKQLEVINAIVDPSGSLDLLTGNRSLASSAQPG
Sbjct: 1441 INAENEVPILKTSNKEISSILKELRRVQKQLEVINAIVDPSGSLDLLTGNRSLASSAQPG 1500

Query: 1501 LGKGRVAAQSPPSPASAEALLPALPLRNFPQRASCGPPSLPDPTFLPDAERFLI 1554
            LGKGRVAAQSPPSPASAEALLPALPLRNFPQRASCGPPSLPDPTFLPDAERFLI
Sbjct: 1501 LGKGRVAAQSPPSPASAEALLPALPLRNFPQRASCGPPSLPDPTFLPDAERFLI 1554


>gi|61742808 hypothetical protein LOC283638 isoform 2 [Homo sapiens]
          Length = 1484

 Score = 2979 bits (7722), Expect = 0.0
 Identities = 1484/1484 (100%), Positives = 1484/1484 (100%)

Query: 71   MRIPDQKYVTLKLNDVIRFGYDSNMYVLERVQHRVPEEALKHEKYTSQLQVSVKGLAPKR 130
            MRIPDQKYVTLKLNDVIRFGYDSNMYVLERVQHRVPEEALKHEKYTSQLQVSVKGLAPKR
Sbjct: 1    MRIPDQKYVTLKLNDVIRFGYDSNMYVLERVQHRVPEEALKHEKYTSQLQVSVKGLAPKR 60

Query: 131  SEALPEHTPYCEASNPRPEKGDRRPGTEAASYRTPLYGQPSWWGEDDGSTLPDAQRQGEP 190
            SEALPEHTPYCEASNPRPEKGDRRPGTEAASYRTPLYGQPSWWGEDDGSTLPDAQRQGEP
Sbjct: 61   SEALPEHTPYCEASNPRPEKGDRRPGTEAASYRTPLYGQPSWWGEDDGSTLPDAQRQGEP 120

Query: 191  YPERPKGPVQQDGELHGFRAPAEPQGCSFRREPSYFEIPTKETPQPSQPPEVPAHEMPTK 250
            YPERPKGPVQQDGELHGFRAPAEPQGCSFRREPSYFEIPTKETPQPSQPPEVPAHEMPTK
Sbjct: 121  YPERPKGPVQQDGELHGFRAPAEPQGCSFRREPSYFEIPTKETPQPSQPPEVPAHEMPTK 180

Query: 251  DAEAGGGGAAPVVQSHASFTIEFDDCSPGKMKIKDHITKFSLRQRRPPGKEATPGEMVSA 310
            DAEAGGGGAAPVVQSHASFTIEFDDCSPGKMKIKDHITKFSLRQRRPPGKEATPGEMVSA
Sbjct: 181  DAEAGGGGAAPVVQSHASFTIEFDDCSPGKMKIKDHITKFSLRQRRPPGKEATPGEMVSA 240

Query: 311  ETKVADWLVQNDPSLLHRVGPGDDRHSTKSDLPVHTRTLKGHKHEDGTQSDSEDPLAKAA 370
            ETKVADWLVQNDPSLLHRVGPGDDRHSTKSDLPVHTRTLKGHKHEDGTQSDSEDPLAKAA
Sbjct: 241  ETKVADWLVQNDPSLLHRVGPGDDRHSTKSDLPVHTRTLKGHKHEDGTQSDSEDPLAKAA 300

Query: 371  SAAGVPLEASGEQVRLQRQIKRDPQELLHNQQAFVIEFFDEDTPRKKRSQSFTHSPSGDP 430
            SAAGVPLEASGEQVRLQRQIKRDPQELLHNQQAFVIEFFDEDTPRKKRSQSFTHSPSGDP
Sbjct: 301  SAAGVPLEASGEQVRLQRQIKRDPQELLHNQQAFVIEFFDEDTPRKKRSQSFTHSPSGDP 360

Query: 431  KADKRRGPTPADRDRPSVPAPVQAGGRSSGPQRAGSLKREKTEERLGSPSPASRTPARPF 490
            KADKRRGPTPADRDRPSVPAPVQAGGRSSGPQRAGSLKREKTEERLGSPSPASRTPARPF
Sbjct: 361  KADKRRGPTPADRDRPSVPAPVQAGGRSSGPQRAGSLKREKTEERLGSPSPASRTPARPF 420

Query: 491  GSVGRRSRLAQDFMAQCLRESSPAARPSPEKVPPVLPAPLTPHGTSPVGPPTPPPAPTDP 550
            GSVGRRSRLAQDFMAQCLRESSPAARPSPEKVPPVLPAPLTPHGTSPVGPPTPPPAPTDP
Sbjct: 421  GSVGRRSRLAQDFMAQCLRESSPAARPSPEKVPPVLPAPLTPHGTSPVGPPTPPPAPTDP 480

Query: 551  QLTKARKQEEDDSLSDAGTYTIETEAQDTEVEEARKMIDQVFGVLESPELSRASSATFRP 610
            QLTKARKQEEDDSLSDAGTYTIETEAQDTEVEEARKMIDQVFGVLESPELSRASSATFRP
Sbjct: 481  QLTKARKQEEDDSLSDAGTYTIETEAQDTEVEEARKMIDQVFGVLESPELSRASSATFRP 540

Query: 611  VIRGDRDESDDGGVAQRMALLQEFASRPLGAAPQAEHQGLPVPGSPGGQKWVSRWASLAD 670
            VIRGDRDESDDGGVAQRMALLQEFASRPLGAAPQAEHQGLPVPGSPGGQKWVSRWASLAD
Sbjct: 541  VIRGDRDESDDGGVAQRMALLQEFASRPLGAAPQAEHQGLPVPGSPGGQKWVSRWASLAD 600

Query: 671  SYSDPGLTEDGLGRRGGEPEGSLPVRMRRRLPQLPSERADSPAGPESSRRSGPGPPELDS 730
            SYSDPGLTEDGLGRRGGEPEGSLPVRMRRRLPQLPSERADSPAGPESSRRSGPGPPELDS
Sbjct: 601  SYSDPGLTEDGLGRRGGEPEGSLPVRMRRRLPQLPSERADSPAGPESSRRSGPGPPELDS 660

Query: 731  EQPSRLFGQEELDPDSLSDASGSDGGRGPEPGVEPQDSRRRSPQEGPTWSRGRRSPRAPG 790
            EQPSRLFGQEELDPDSLSDASGSDGGRGPEPGVEPQDSRRRSPQEGPTWSRGRRSPRAPG
Sbjct: 661  EQPSRLFGQEELDPDSLSDASGSDGGRGPEPGVEPQDSRRRSPQEGPTWSRGRRSPRAPG 720

Query: 791  EPTPASFFIGDQNGDAVLSRKPLAAPGDGEGLGQTAQPSPPARDGVYVSANGRMVIQLRP 850
            EPTPASFFIGDQNGDAVLSRKPLAAPGDGEGLGQTAQPSPPARDGVYVSANGRMVIQLRP
Sbjct: 721  EPTPASFFIGDQNGDAVLSRKPLAAPGDGEGLGQTAQPSPPARDGVYVSANGRMVIQLRP 780

Query: 851  GRSPEPDGPAPAFLRQESFTKEPASGPPAPGKPPHISSHPLLQDLAATRAARMDFHSQDT 910
            GRSPEPDGPAPAFLRQESFTKEPASGPPAPGKPPHISSHPLLQDLAATRAARMDFHSQDT
Sbjct: 781  GRSPEPDGPAPAFLRQESFTKEPASGPPAPGKPPHISSHPLLQDLAATRAARMDFHSQDT 840

Query: 911  HLILKETETALAALEARLLSNSVDAECEGGSTPRPPEDALSGDSDVDTASTVSLRSGKSG 970
            HLILKETETALAALEARLLSNSVDAECEGGSTPRPPEDALSGDSDVDTASTVSLRSGKSG
Sbjct: 841  HLILKETETALAALEARLLSNSVDAECEGGSTPRPPEDALSGDSDVDTASTVSLRSGKSG 900

Query: 971  PSPTTPQPLRAQKEMSPSPPAAQDPGGTALVSAREQSSERQHHPLGPTDMGRGEPVRRSA 1030
            PSPTTPQPLRAQKEMSPSPPAAQDPGGTALVSAREQSSERQHHPLGPTDMGRGEPVRRSA
Sbjct: 901  PSPTTPQPLRAQKEMSPSPPAAQDPGGTALVSAREQSSERQHHPLGPTDMGRGEPVRRSA 960

Query: 1031 IRRGHRPRGSLDWPSEERGPVLAHLPSSDVMASNHETPEATGAGRLGSRRKPAAPPPSPA 1090
            IRRGHRPRGSLDWPSEERGPVLAHLPSSDVMASNHETPEATGAGRLGSRRKPAAPPPSPA
Sbjct: 961  IRRGHRPRGSLDWPSEERGPVLAHLPSSDVMASNHETPEATGAGRLGSRRKPAAPPPSPA 1020

Query: 1091 AREEQSRSSASSQKGPQALTRSNSLSTPRPTRASRLRRARLGDASDTEAADGERGSLGNP 1150
            AREEQSRSSASSQKGPQALTRSNSLSTPRPTRASRLRRARLGDASDTEAADGERGSLGNP
Sbjct: 1021 AREEQSRSSASSQKGPQALTRSNSLSTPRPTRASRLRRARLGDASDTEAADGERGSLGNP 1080

Query: 1151 EPVGRPAAEQAKKLSRLDILAMPRKRAGSFTGTSDPEAAPARTSFSGRSVELCCASRKPT 1210
            EPVGRPAAEQAKKLSRLDILAMPRKRAGSFTGTSDPEAAPARTSFSGRSVELCCASRKPT
Sbjct: 1081 EPVGRPAAEQAKKLSRLDILAMPRKRAGSFTGTSDPEAAPARTSFSGRSVELCCASRKPT 1140

Query: 1211 MAEARAVSRKAANTATTTGPRQPFSRARSGSARYTSTTQTPRAGSSSRARSRAPGPRDTD 1270
            MAEARAVSRKAANTATTTGPRQPFSRARSGSARYTSTTQTPRAGSSSRARSRAPGPRDTD
Sbjct: 1141 MAEARAVSRKAANTATTTGPRQPFSRARSGSARYTSTTQTPRAGSSSRARSRAPGPRDTD 1200

Query: 1271 DDEEEPDPYGFIVQTAEIAEIARLSQTLVKDVAILAQEIHDVAGDGDTLGSSEPAHSASL 1330
            DDEEEPDPYGFIVQTAEIAEIARLSQTLVKDVAILAQEIHDVAGDGDTLGSSEPAHSASL
Sbjct: 1201 DDEEEPDPYGFIVQTAEIAEIARLSQTLVKDVAILAQEIHDVAGDGDTLGSSEPAHSASL 1260

Query: 1331 SNMPSTPASTISAREELVQRIPEASLNFQKVPPGSLNSRDFDQNMNDSCEDALANKTRPR 1390
            SNMPSTPASTISAREELVQRIPEASLNFQKVPPGSLNSRDFDQNMNDSCEDALANKTRPR
Sbjct: 1261 SNMPSTPASTISAREELVQRIPEASLNFQKVPPGSLNSRDFDQNMNDSCEDALANKTRPR 1320

Query: 1391 NREEVIFDNLMLNPVSQLSQAIRENTEHLAEKMKILFQNTGRAWEDLEARINAENEVPIL 1450
            NREEVIFDNLMLNPVSQLSQAIRENTEHLAEKMKILFQNTGRAWEDLEARINAENEVPIL
Sbjct: 1321 NREEVIFDNLMLNPVSQLSQAIRENTEHLAEKMKILFQNTGRAWEDLEARINAENEVPIL 1380

Query: 1451 KTSNKEISSILKELRRVQKQLEVINAIVDPSGSLDLLTGNRSLASSAQPGLGKGRVAAQS 1510
            KTSNKEISSILKELRRVQKQLEVINAIVDPSGSLDLLTGNRSLASSAQPGLGKGRVAAQS
Sbjct: 1381 KTSNKEISSILKELRRVQKQLEVINAIVDPSGSLDLLTGNRSLASSAQPGLGKGRVAAQS 1440

Query: 1511 PPSPASAEALLPALPLRNFPQRASCGPPSLPDPTFLPDAERFLI 1554
            PPSPASAEALLPALPLRNFPQRASCGPPSLPDPTFLPDAERFLI
Sbjct: 1441 PPSPASAEALLPALPLRNFPQRASCGPPSLPDPTFLPDAERFLI 1484


>gi|109255228 centrosomal protein 170kDa isoform alpha [Homo sapiens]
          Length = 1584

 Score =  659 bits (1701), Expect = 0.0
 Identities = 555/1654 (33%), Positives = 807/1654 (48%), Gaps = 295/1654 (17%)

Query: 1    MSATSWFLVSSSGARHRLPRELIFVGREECELMLQSRSVDKQHAVINYDQDRDEHWVKDL 60
            MS TSWFLVSS G RHRLPRE+IFVGR++CELMLQSRSVDKQHAVINYD   DEH VKDL
Sbjct: 1    MSLTSWFLVSSGGTRHRLPREMIFVGRDDCELMLQSRSVDKQHAVINYDASTDEHLVKDL 60

Query: 61   GSLNGTFVNDMRIPDQKYVTLKLNDVIRFGYDSNMYVLERVQHRVPEEALKHEKYTSQLQ 120
            GSLNGTFVND+RIP+Q Y+TLKL D +RFGYD+N++ + + + RVPEEALKHEK+T QLQ
Sbjct: 61   GSLNGTFVNDVRIPEQTYITLKLEDKLRFGYDTNLFTVVQGEMRVPEEALKHEKFTIQLQ 120

Query: 121  VSVKGLAPKRSEALPEHTPYCEASNPRPE---------KGDRRPGTEAASYR-TPLYGQP 170
            +S K    + S++    +   + ++   E         K + +    +A  R TPLYGQP
Sbjct: 121  LSQKSSESELSKSASAKSIDSKVADAATEVQHKTTEALKSEEKAMDISAMPRGTPLYGQP 180

Query: 171  SWWGEDDGSTLPDAQRQGEPYPERPKGPVQQDG----ELHGFRAPAEPQGC-SFRREPSY 225
            SWWG+D+       +  G+P  +  +      G    ++    A A  +    F REPSY
Sbjct: 181  SWWGDDEVDEKRAFKTNGKPEEKNHEAGTSGCGIDAKQVEEQSAAANEEVLFPFCREPSY 240

Query: 226  FEIPTKETPQPSQPPEVPAHEMPTKDAEAGGGGAAPVVQSHASFTIEFDDCSPGKMKIKD 285
            FEIPTKE  QPSQ  E   HE+PTKD  +     A     HASFTIEFDD +PGK+ I+D
Sbjct: 241  FEIPTKEFQQPSQITESTIHEIPTKDTPSSHITGA----GHASFTIEFDDSTPGKVTIRD 296

Query: 286  HITKFSLRQRRPPGKEATPGE---------MVSAETKVADWLVQNDPSLLHRVGPGDDRH 336
            H+TKF+  QR    K+++PG          M++ E KVADWL QN+P  +      +D  
Sbjct: 297  HVTKFTSDQRH-KSKKSSPGTQDLLGIQTGMMAPENKVADWLAQNNPPQMLWERTEEDSK 355

Query: 337  STKSDLPVHTRTLKGHKHEDGTQSDSEDPLAKAASAAGVPLEASGEQVRLQRQIKRDPQE 396
            S KSD+PV+ + LKG+KH+DGTQSDSE+        AG     S ++  L+  ++R   E
Sbjct: 356  SIKSDVPVYLKRLKGNKHDDGTQSDSEN--------AGAHRRCS-KRATLEEHLRRHHSE 406

Query: 397  LLHNQQAFVIEFFDEDTPRKKRSQSFTHSPSGDPKADKRRGPTPADRDRPSVPAPVQAGG 456
                Q+    E        K + Q+ T S      A  R G          VP       
Sbjct: 407  HKKLQKVQATE--------KHQDQAVTSS------AHHRGG--------HGVP------- 437

Query: 457  RSSGPQRAGSLKREKTEERLGSPSPASRTPARPFGSVGRRSRLAQDFMAQCLRESSPAAR 516
                    G L ++K+EE   S         R  GS+G R     D M +     + A  
Sbjct: 438  -------HGKLLKQKSEEPSVSIPFLQTALLRSSGSLGHRPSQEMDKMLK-----NQATS 485

Query: 517  PSPEKVPPVLPAPLTPHGTSPVGPPTPPPAPTDPQLTKARKQEEDDSLSDAGTYTIETEA 576
             + EK                                     + DD  SD GTYTIE E 
Sbjct: 486  ATSEK-------------------------------------DNDDDQSDKGTYTIELEN 508

Query: 577  QDTEVEEARKMIDQVFGVLESPELSRASSATFRPVI-RGDRDESDDGGVAQRMALLQEFA 635
             ++E  EARKMID+VFGV ++ + +       RPVI    +D   D  ++   A+++E  
Sbjct: 509  PNSEEVEARKMIDKVFGVDDNQDYN-------RPVINEKHKDLIKDWALSSAAAVMEE-- 559

Query: 636  SRPLGAAPQAEHQGLPVPGSPGGQKWVSRWASLADSY-------------------SDPG 676
             +PL       H       S G ++WVS+WASLA ++                   ++  
Sbjct: 560  RKPL--TTSGFHHSEEGTSSSGSKRWVSQWASLAANHTRHDQEERIMEFSAPLPLENETE 617

Query: 677  LTEDGLGRRGGEPEGSLP---VRMRRRLPQLPSER--ADSPAGPESSRRSGPGPPE---- 727
            ++E G+  R      SL     R RR LPQLP+E    +S      ++RS  G  +    
Sbjct: 618  ISESGMTVRSTGSATSLASQGERRRRTLPQLPNEEKSLESHRAKVVTQRSEIGEKQDTEL 677

Query: 728  LDSEQPSRLFGQEELDPD-SLSDASGSDGGR---------------GPEPGVEPQDSRRR 771
             + E P++++ +++ D D  LS  + +  G                   PG E  ++ + 
Sbjct: 678  QEKETPTQVYQKDKQDADRPLSKMNRAVNGETLKTGGDNKTLLHLGSSAPGKEKSETDKE 737

Query: 772  SPQEGPTWSR-GRRSPRAPGEPTPASFFIGDQNGDAVLSRKPLAAPGDGEGLGQTAQPSP 830
            +     T ++  ++  R   + TP      + +G     R+        E   Q +Q  P
Sbjct: 738  TSLVKQTLAKLQQQEQREEAQWTPTKLSSKNVSGQTDKCRE--------ETFKQESQ--P 787

Query: 831  PARDGVYVSANGRMVIQLRPGR--------SPEPDG-----PAPAFLRQESFTKEPASGP 877
            P ++  + ++ G  V Q    R        S  P G      + + +RQ SFT E     
Sbjct: 788  PEKNSGHSTSKGDRVAQSESKRRKAEEILKSQTPKGGDKKESSKSLVRQGSFTIE----K 843

Query: 878  PAPGKP----PHI----SSHPLLQDLAATRAARMDFHSQ--------DTHLILKETETAL 921
            P+P  P    PHI    SS P    LA T A+R+   S+        DT LILK+TE  +
Sbjct: 844  PSPNIPIELIPHINKQTSSTP--SSLALTSASRIRERSESLDPDSSMDTTLILKDTEAVM 901

Query: 922  AALEARLL-SNSVDAECEGGSTPRPPED-ALSGDSDVDTASTVSLRSGKSGPSPTTPQP- 978
            A LEA+L   N  D   EG  TP    D ++S +SDVDTAST+SL +G++    T  +  
Sbjct: 902  AFLEAKLREDNKTD---EGPDTPSYNRDNSISPESDVDTASTISLVTGETERKSTQKRKS 958

Query: 979  -LRAQKEMSPSPPAAQDPGGTALVSAREQSSERQHHPLGPTDMGRGEPVRRSAIRRGHRP 1037
                 K+   +   ++D   ++   ARE+  ++       TD+G     R+     G   
Sbjct: 959  FTSLYKDRCSTGSPSKDVTKSSSSGAREKMEKKTKS--RSTDVGSRADGRKFVQSSGRIR 1016

Query: 1038 RGSLDWPSEERGPVLAHLPSSDVMASNHETPEATGAGRLGSRRKPAAPPPSPAAREEQSR 1097
            + S+D   +++   + H   SD+M+S+ ET      G     R P          + +  
Sbjct: 1017 QPSVDLTDDDQTSSVPHSAISDIMSSDQETYSCKPHG-----RTPLTSADEHVHSKLEGS 1071

Query: 1098 SSASSQKGP---QALTRSNSLSTPRPTRASRLRRARLGDASDTEAADGERGSLG------ 1148
                S+  P    + ++S +L  PRPTR S LRRARLG+ASD+E AD ++ S+       
Sbjct: 1072 KVTKSKTSPVVSGSSSKSTTLPRPRPTRTSLLRRARLGEASDSELADADKASVASEVSTT 1131

Query: 1149 ---NPEPVGRPAAEQAKKLSRLDILAMPRK-RAGSFTGTSDPEAAPARTSFSGRSVE--- 1201
               +  P GR      + +SR+D+LA PR+ R GS +  SD EA  +R+S S R+ E   
Sbjct: 1132 SSTSKPPTGR------RNISRIDLLAQPRRTRLGSLSARSDSEATISRSSASSRTAEAII 1185

Query: 1202 -----LCCASRKPTMAEARAVSR----KAANTATTTGPRQPFSRARSGSARYTSTTQ--- 1249
                 L  + +      A ++SR    K  +  +  G     SR R     Y ST++   
Sbjct: 1186 RSGARLVPSDKFSPRIRANSISRLSDSKVKSMTSAHGSASVNSRWRRFPTDYASTSEDEF 1245

Query: 1250 -------------TPRAGSSSRARSRAPG-PRDTDDDEEEPDPYGFIVQ-TAEIAEIARL 1294
                         T  A  ++R +S     P  +       +   +I   TA   EIAR+
Sbjct: 1246 GSNRNSPKHTRLRTSPALKTTRLQSAGSAMPTSSSFKHRIKEQEDYIRDWTAHREEIARI 1305

Query: 1295 SQTLVKDVAILAQEIHDVAGDGDTLGSSEPAHSASLSNMPSTPASTISAREELVQRIPEA 1354
            SQ    D+A++A+EI+DVAG+ D++ SS  A S ++S   +TP S I  REELV R+ + 
Sbjct: 1306 SQ----DLALIAREINDVAGEIDSVTSSGTAPSTTVSTAATTPGSAIDTREELVDRVFDE 1361

Query: 1355 SLNFQKVPP---------GSLNSRDFDQNMNDSCEDALANKTRPRNREEVIFDNLMLNPV 1405
            SLNF+K+PP          +  S D      +  +     + R  +R+EV+ DNL+L+ V
Sbjct: 1362 SLNFRKIPPLVHSKTPEGNNGRSGDPRPQAAEPPDHLTITRRRTWSRDEVMGDNLLLSSV 1421

Query: 1406 SQLSQAIRENTEHLAEKMKILFQNTGRAWEDLEARINAENEVPILKTSNKEISSILKELR 1465
             Q S+ IR++ +  A K++ILF++  R W+D+E+++ AE+EVPI+KTS+ EISSIL+EL+
Sbjct: 1422 FQFSKKIRQSIDKTAGKIRILFKDKDRNWDDIESKLRAESEVPIVKTSSMEISSILQELK 1481

Query: 1466 RVQKQLEVINAIVDPSGSLDLLTGNRSLASSAQP 1499
            RV+KQL+ INA++DP G+L+ L  N    S+  P
Sbjct: 1482 RVEKQLQAINAMIDPDGTLEAL-NNMGFPSAMLP 1514


>gi|109255230 centrosomal protein 170kDa isoform beta [Homo sapiens]
          Length = 1486

 Score =  347 bits (891), Expect = 4e-95
 Identities = 198/402 (49%), Positives = 254/402 (63%), Gaps = 29/402 (7%)

Query: 1   MSATSWFLVSSSGARHRLPRELIFVGREECELMLQSRSVDKQHAVINYDQDRDEHWVKDL 60
           MS TSWFLVSS G RHRLPRE+IFVGR++CELMLQSRSVDKQHAVINYD   DEH VKDL
Sbjct: 1   MSLTSWFLVSSGGTRHRLPREMIFVGRDDCELMLQSRSVDKQHAVINYDASTDEHLVKDL 60

Query: 61  GSLNGTFVNDMRIPDQKYVTLKLNDVIRFGYDSNMYVLERVQHRVPEEALKHEKYTSQLQ 120
           GSLNGTFVND+RIP+Q Y+TLKL D +RFGYD+N++ + + + RVPEEALKHEK+T QLQ
Sbjct: 61  GSLNGTFVNDVRIPEQTYITLKLEDKLRFGYDTNLFTVVQGEMRVPEEALKHEKFTIQLQ 120

Query: 121 VSVKGLAPKRSEALPEHTPYCEASNPRPE---------KGDRRPGTEAASYR-TPLYGQP 170
           +S K    + S++    +   + ++   E         K + +    +A  R TPLYGQP
Sbjct: 121 LSQKSSESELSKSASAKSIDSKVADAATEVQHKTTEALKSEEKAMDISAMPRGTPLYGQP 180

Query: 171 SWWGEDDGSTLPDAQRQGEPYPERPKGPVQQDG----ELHGFRAPAEPQGC-SFRREPSY 225
           SWWG+D+       +  G+P  +  +      G    ++    A A  +    F REPSY
Sbjct: 181 SWWGDDEVDEKRAFKTNGKPEEKNHEAGTSGCGIDAKQVEEQSAAANEEVLFPFCREPSY 240

Query: 226 FEIPTKETPQPSQPPEVPAHEMPTKDAEAGGGGAAPVVQSHASFTIEFDDCSPGKMKIKD 285
           FEIPTKE  QPSQ  E   HE+PTKD  +     A     HASFTIEFDD +PGK+ I+D
Sbjct: 241 FEIPTKEFQQPSQITESTIHEIPTKDTPSSHITGA----GHASFTIEFDDSTPGKVTIRD 296

Query: 286 HITKFSLRQRRPPGKEATPGE---------MVSAETKVADWLVQNDPSLLHRVGPGDDRH 336
           H+TKF+  QR    K+++PG          M++ E KVADWL QN+P  +      +D  
Sbjct: 297 HVTKFTSDQRH-KSKKSSPGTQDLLGIQTGMMAPENKVADWLAQNNPPQMLWERTEEDSK 355

Query: 337 STKSDLPVHTRTLKGHKHEDGTQSDSEDPLAKAASAAGVPLE 378
           S KSD+PV+ + LKG+KH+DGTQSDSE+  A    +    LE
Sbjct: 356 SIKSDVPVYLKRLKGNKHDDGTQSDSENAGAHRRCSKRATLE 397



 Score =  307 bits (786), Expect = 6e-83
 Identities = 316/1057 (29%), Positives = 496/1057 (46%), Gaps = 189/1057 (17%)

Query: 580  EVEEARKMIDQ--VFGVLESPELSRASSATFRPVIRGD-RDESDDGGVAQRMALLQEFAS 636
            +V+   K  DQ  VFGV ++ + +R       PVI    +D   D  ++   A+++E   
Sbjct: 412  KVQATEKHQDQAVVFGVDDNQDYNR-------PVINEKHKDLIKDWALSSAAAVMEE--R 462

Query: 637  RPLGAAPQAEHQGLPVPGSPGGQKWVSRWASLADSYS-------------------DPGL 677
            +PL  +    H       S G ++WVS+WASLA +++                   +  +
Sbjct: 463  KPLTTS--GFHHSEEGTSSSGSKRWVSQWASLAANHTRHDQEERIMEFSAPLPLENETEI 520

Query: 678  TEDGLGRRGGEPEGSLPV---RMRRRLPQLPSERA--DSPAGPESSRRSGPGPPE----L 728
            +E G+  R      SL     R RR LPQLP+E    +S      ++RS  G  +     
Sbjct: 521  SESGMTVRSTGSATSLASQGERRRRTLPQLPNEEKSLESHRAKVVTQRSEIGEKQDTELQ 580

Query: 729  DSEQPSRLFGQEELDPDS-LSDASGSDGGR---------------GPEPGVEPQDSRRRS 772
            + E P++++ +++ D D  LS  + +  G                   PG E  ++ + +
Sbjct: 581  EKETPTQVYQKDKQDADRPLSKMNRAVNGETLKTGGDNKTLLHLGSSAPGKEKSETDKET 640

Query: 773  PQEGPTWSR-GRRSPRAPGEPTPASFFIGDQNGDAVLSRKPLAAPGDGEGLGQTAQPSPP 831
                 T ++  ++  R   + TP      + +G     R+        E   Q +QP  P
Sbjct: 641  SLVKQTLAKLQQQEQREEAQWTPTKLSSKNVSGQTDKCRE--------ETFKQESQP--P 690

Query: 832  ARDGVYVSANGRMVIQLRPGR--------SPEPDG-----PAPAFLRQESFTKEPASGPP 878
             ++  + ++ G  V Q    R        S  P G      + + +RQ SFT E     P
Sbjct: 691  EKNSGHSTSKGDRVAQSESKRRKAEEILKSQTPKGGDKKESSKSLVRQGSFTIEK----P 746

Query: 879  APGKP----PHI----SSHPLLQDLAATRAARMDFHSQ--------DTHLILKETETALA 922
            +P  P    PHI    SS P    LA T A+R+   S+        DT LILK+TE  +A
Sbjct: 747  SPNIPIELIPHINKQTSSTP--SSLALTSASRIRERSESLDPDSSMDTTLILKDTEAVMA 804

Query: 923  ALEARLLS-NSVDAECEGGSTPRPPED-ALSGDSDVDTASTVSLRSGKSGPSPTTPQP-- 978
             LEA+L   N  D   EG  TP    D ++S +SDVDTAST+SL +G++    T  +   
Sbjct: 805  FLEAKLREDNKTD---EGPDTPSYNRDNSISPESDVDTASTISLVTGETERKSTQKRKSF 861

Query: 979  LRAQKEMSPSPPAAQDPGGTALVSAREQSSERQHHPLGPTDMGRGEPVRRSAIRRGHRPR 1038
                K+   +   ++D   ++   ARE+  ++       TD+G     R+     G   +
Sbjct: 862  TSLYKDRCSTGSPSKDVTKSSSSGAREKMEKKTKSR--STDVGSRADGRKFVQSSGRIRQ 919

Query: 1039 GSLDWPSEERGPVLAHLPSSDVMASNHETPEATGAGRLGSRRKPAAPPPSPAAREEQSR- 1097
             S+D   +++   + H   SD+M+S+ ET      GR          P + A     S+ 
Sbjct: 920  PSVDLTDDDQTSSVPHSAISDIMSSDQETYSCKPHGRT---------PLTSADEHVHSKL 970

Query: 1098 --SSASSQKGPQALTRSNSLST----PRPTRASRLRRARLGDASDTEAADGERGSLGNP- 1150
              S  +  K    ++ S+S ST    PRPTR S LRRARLG+ASD+E AD ++ S+ +  
Sbjct: 971  EGSKVTKSKTSPVVSGSSSKSTTLPRPRPTRTSLLRRARLGEASDSELADADKASVASEV 1030

Query: 1151 --------EPVGRPAAEQAKKLSRLDILAMPRK-RAGSFTGTSDPEAAPARTSFSGRSVE 1201
                     P GR      + +SR+D+LA PR+ R GS +  SD EA  +R+S S R+ E
Sbjct: 1031 STTSSTSKPPTGR------RNISRIDLLAQPRRTRLGSLSARSDSEATISRSSASSRTAE 1084

Query: 1202 --------LCCASRKPTMAEARAVSR----KAANTATTTGPRQPFSRARSGSARYTSTTQ 1249
                    L  + +      A ++SR    K  +  +  G     SR R     Y ST++
Sbjct: 1085 AIIRSGARLVPSDKFSPRIRANSISRLSDSKVKSMTSAHGSASVNSRWRRFPTDYASTSE 1144

Query: 1250 ----------------TPRAGSSSRARSRAPG-PRDTDDDEEEPDPYGFIVQ-TAEIAEI 1291
                            T  A  ++R +S     P  +       +   +I   TA   EI
Sbjct: 1145 DEFGSNRNSPKHTRLRTSPALKTTRLQSAGSAMPTSSSFKHRIKEQEDYIRDWTAHREEI 1204

Query: 1292 ARLSQTLVKDVAILAQEIHDVAGDGDTLGSSEPAHSASLSNMPSTPASTISAREELVQRI 1351
            AR+SQ    D+A++A+EI+DVAG+ D++ SS  A S ++S   +TP S I  REELV R+
Sbjct: 1205 ARISQ----DLALIAREINDVAGEIDSVTSSGTAPSTTVSTAATTPGSAIDTREELVDRV 1260

Query: 1352 PEASLNFQKVPP---------GSLNSRDFDQNMNDSCEDALANKTRPRNREEVIFDNLML 1402
             + SLNF+K+PP          +  S D      +  +     + R  +R+EV+ DNL+L
Sbjct: 1261 FDESLNFRKIPPLVHSKTPEGNNGRSGDPRPQAAEPPDHLTITRRRTWSRDEVMGDNLLL 1320

Query: 1403 NPVSQLSQAIRENTEHLAEKMKILFQNTGRAWEDLEARINAENEVPILKTSNKEISSILK 1462
            + V Q S+ IR++ +  A K++ILF++  R W+D+E+++ AE+EVPI+KTS+ EISSIL+
Sbjct: 1321 SSVFQFSKKIRQSIDKTAGKIRILFKDKDRNWDDIESKLRAESEVPIVKTSSMEISSILQ 1380

Query: 1463 ELRRVQKQLEVINAIVDPSGSLDLLTGNRSLASSAQP 1499
            EL+RV+KQL+ INA++DP G+L+ L  N    S+  P
Sbjct: 1381 ELKRVEKQLQAINAMIDPDGTLEAL-NNMGFPSAMLP 1416


>gi|109255232 centrosomal protein 170kDa isoform gamma [Homo
           sapiens]
          Length = 1460

 Score =  347 bits (891), Expect = 4e-95
 Identities = 198/402 (49%), Positives = 254/402 (63%), Gaps = 29/402 (7%)

Query: 1   MSATSWFLVSSSGARHRLPRELIFVGREECELMLQSRSVDKQHAVINYDQDRDEHWVKDL 60
           MS TSWFLVSS G RHRLPRE+IFVGR++CELMLQSRSVDKQHAVINYD   DEH VKDL
Sbjct: 1   MSLTSWFLVSSGGTRHRLPREMIFVGRDDCELMLQSRSVDKQHAVINYDASTDEHLVKDL 60

Query: 61  GSLNGTFVNDMRIPDQKYVTLKLNDVIRFGYDSNMYVLERVQHRVPEEALKHEKYTSQLQ 120
           GSLNGTFVND+RIP+Q Y+TLKL D +RFGYD+N++ + + + RVPEEALKHEK+T QLQ
Sbjct: 61  GSLNGTFVNDVRIPEQTYITLKLEDKLRFGYDTNLFTVVQGEMRVPEEALKHEKFTIQLQ 120

Query: 121 VSVKGLAPKRSEALPEHTPYCEASNPRPE---------KGDRRPGTEAASYR-TPLYGQP 170
           +S K    + S++    +   + ++   E         K + +    +A  R TPLYGQP
Sbjct: 121 LSQKSSESELSKSASAKSIDSKVADAATEVQHKTTEALKSEEKAMDISAMPRGTPLYGQP 180

Query: 171 SWWGEDDGSTLPDAQRQGEPYPERPKGPVQQDG----ELHGFRAPAEPQGC-SFRREPSY 225
           SWWG+D+       +  G+P  +  +      G    ++    A A  +    F REPSY
Sbjct: 181 SWWGDDEVDEKRAFKTNGKPEEKNHEAGTSGCGIDAKQVEEQSAAANEEVLFPFCREPSY 240

Query: 226 FEIPTKETPQPSQPPEVPAHEMPTKDAEAGGGGAAPVVQSHASFTIEFDDCSPGKMKIKD 285
           FEIPTKE  QPSQ  E   HE+PTKD  +     A     HASFTIEFDD +PGK+ I+D
Sbjct: 241 FEIPTKEFQQPSQITESTIHEIPTKDTPSSHITGA----GHASFTIEFDDSTPGKVTIRD 296

Query: 286 HITKFSLRQRRPPGKEATPGE---------MVSAETKVADWLVQNDPSLLHRVGPGDDRH 336
           H+TKF+  QR    K+++PG          M++ E KVADWL QN+P  +      +D  
Sbjct: 297 HVTKFTSDQRH-KSKKSSPGTQDLLGIQTGMMAPENKVADWLAQNNPPQMLWERTEEDSK 355

Query: 337 STKSDLPVHTRTLKGHKHEDGTQSDSEDPLAKAASAAGVPLE 378
           S KSD+PV+ + LKG+KH+DGTQSDSE+  A    +    LE
Sbjct: 356 SIKSDVPVYLKRLKGNKHDDGTQSDSENAGAHRRCSKRATLE 397



 Score =  308 bits (788), Expect = 3e-83
 Identities = 316/1042 (30%), Positives = 490/1042 (47%), Gaps = 185/1042 (17%)

Query: 580  EVEEARKMIDQ--VFGVLESPELSRASSATFRPVIRGD-RDESDDGGVAQRMALLQEFAS 636
            +V+   K  DQ  VFGV ++ + +R       PVI    +D   D  ++   A+++E   
Sbjct: 412  KVQATEKHQDQAVVFGVDDNQDYNR-------PVINEKHKDLIKDWALSSAAAVMEE--R 462

Query: 637  RPLGAAPQAEHQGLPVPGSPGGQKWVSRWASLADSYS-------------------DPGL 677
            +PL  +    H       S G ++WVS+WASLA +++                   +  +
Sbjct: 463  KPLTTS--GFHHSEEGTSSSGSKRWVSQWASLAANHTRHDQEERIMEFSAPLPLENETEI 520

Query: 678  TEDGLGRRGGEPEGSLPV---RMRRRLPQLPSERA--DSPAGPESSRRSGPGPPE----L 728
            +E G+  R      SL     R RR LPQLP+E    +S      ++RS  G  +     
Sbjct: 521  SESGMTVRSTGSATSLASQGERRRRTLPQLPNEEKSLESHRAKVVTQRSEIGEKQDTELQ 580

Query: 729  DSEQPSRLFGQEELDPDS-LSDASGSDGGR---------------GPEPGVEPQDSRRRS 772
            + E P++++ +++ D D  LS  + +  G                   PG E  ++ + +
Sbjct: 581  EKETPTQVYQKDKQDADRPLSKMNRAVNGETLKTGGDNKTLLHLGSSAPGKEKSETDKET 640

Query: 773  PQEGPTWSR-GRRSPRAPGEPTPASFFIGDQNGDAVLSRKPLAAPGDGEGLGQTAQPSPP 831
                 T ++  ++  R   + TP      + +G     R+        E   Q +QP  P
Sbjct: 641  SLVKQTLAKLQQQEQREEAQWTPTKLSSKNVSGQTDKCRE--------ETFKQESQP--P 690

Query: 832  ARDGVYVSANGRMVIQLRPGR--------SPEPDG-----PAPAFLRQESFTKEPASGPP 878
             ++  + ++ G  V Q    R        S  P G      + + +RQ SFT E     P
Sbjct: 691  EKNSGHSTSKGDRVAQSESKRRKAEEILKSQTPKGGDKKESSKSLVRQGSFTIEK----P 746

Query: 879  APGKP----PHI----SSHPLLQDLAATRAARMDFHSQ--------DTHLILKETETALA 922
            +P  P    PHI    SS P    LA T A+R+   S+        DT LILK+TE  +A
Sbjct: 747  SPNIPIELIPHINKQTSSTP--SSLALTSASRIRERSESLDPDSSMDTTLILKDTEAVMA 804

Query: 923  ALEARLLS-NSVDAECEGGSTPRPPED-ALSGDSDVDTASTVSLRSGKSGPSPTTPQP-- 978
             LEA+L   N  D   EG  TP    D ++S +SDVDTAST+SL +G++    T  +   
Sbjct: 805  FLEAKLREDNKTD---EGPDTPSYNRDNSISPESDVDTASTISLVTGETERKSTQKRKSF 861

Query: 979  LRAQKEMSPSPPAAQDPGGTALVSAREQSSERQHHPLGPTDMGRGEPVRRSAIRRGHRPR 1038
                K+   +   ++D   ++   ARE+  ++       TD+G     R+     G   +
Sbjct: 862  TSLYKDRCSTGSPSKDVTKSSSSGAREKMEKKTKSR--STDVGSRADGRKFVQSSGRIRQ 919

Query: 1039 GSLDWPSEERGPVLAHLPSSDVMASNHETPEATGAGRLGSRRKPAAPPPSPAAREEQSR- 1097
             S+D   +++   + H   SD+M+S+ ET      GR          P + A     S+ 
Sbjct: 920  PSVDLTDDDQTSSVPHSAISDIMSSDQETYSCKPHGRT---------PLTSADEHVHSKL 970

Query: 1098 --SSASSQKGPQALTRSNSLST----PRPTRASRLRRARLGDASDTEAADGERGSLGNP- 1150
              S  +  K    ++ S+S ST    PRPTR S LRRARLG+ASD+E AD ++ S+ +  
Sbjct: 971  EGSKVTKSKTSPVVSGSSSKSTTLPRPRPTRTSLLRRARLGEASDSELADADKASVASEV 1030

Query: 1151 --------EPVGRPAAEQAKKLSRLDILAMPRK-RAGSFTGTSDPEAAPARTSFSGRSVE 1201
                     P GR      + +SR+D+LA PR+ R GS +  SD EA  +R+S S R+ E
Sbjct: 1031 STTSSTSKPPTGR------RNISRIDLLAQPRRTRLGSLSARSDSEATISRSSASSRTAE 1084

Query: 1202 LCCASRKPTMAEARAVSRKAANTATTTGPRQPFSRARS-GSARYTSTTQTPRAGS----S 1256
                S    +   +   R  AN+ +     +  S   + GSA    TT+   AGS    S
Sbjct: 1085 AIIRSGARLVPSDKFSPRIRANSISRLSDSKVKSMTSAHGSASALKTTRLQSAGSAMPTS 1144

Query: 1257 SRARSRAPGPRDTDDDEEEPDPYGFIVQTAEIAEIARLSQTLVKDVAILAQEIHDVAGDG 1316
            S  + R     D   D            TA   EIAR+SQ    D+A++A+EI+DVAG+ 
Sbjct: 1145 SSFKHRIKEQEDYIRD-----------WTAHREEIARISQ----DLALIAREINDVAGEI 1189

Query: 1317 DTLGSSEPAHSASLSNMPSTPASTISAREE----------LVQRIPEASLNFQKVPP--- 1363
            D++ SS  A S ++S   +TP S I  REE          LV R+ + SLNF+K+PP   
Sbjct: 1190 DSVTSSGTAPSTTVSTAATTPGSAIDTREEVGDLHGEMHKLVDRVFDESLNFRKIPPLVH 1249

Query: 1364 ------GSLNSRDFDQNMNDSCEDALANKTRPRNREEVIFDNLMLNPVSQLSQAIRENTE 1417
                   +  S D      +  +     + R  +R+EV+ DNL+L+ V Q S+ IR++ +
Sbjct: 1250 SKTPEGNNGRSGDPRPQAAEPPDHLTITRRRTWSRDEVMGDNLLLSSVFQFSKKIRQSID 1309

Query: 1418 HLAEKMKILFQNTGRAWEDLEARINAENEVPILKTSNKEISSILKELRRVQKQLEVINAI 1477
              A K++ILF++  R W+D+E+++ AE+EVPI+KTS+ EISSIL+EL+RV+KQL+ INA+
Sbjct: 1310 KTAGKIRILFKDKDRNWDDIESKLRAESEVPIVKTSSMEISSILQELKRVEKQLQAINAM 1369

Query: 1478 VDPSGSLDLLTGNRSLASSAQP 1499
            +DP G+L+ L  N    S+  P
Sbjct: 1370 IDPDGTLEAL-NNMGFPSAMLP 1390


>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
          Length = 2752

 Score = 76.3 bits (186), Expect = 2e-13
 Identities = 274/1221 (22%), Positives = 421/1221 (34%), Gaps = 191/1221 (15%)

Query: 143  ASNPRPEKGDRRPGTEAASYRTPLYGQPSWWGEDDGS-TLPDAQRQGEPYPERPKGPVQQ 201
            +S+P P++  + P  ++ S  +P     S      GS T P A  Q      R       
Sbjct: 818  SSSPPPKQKSKTPSRQSHSSSSPHPKVKSGTPPRQGSITSPQANEQSVTPQRRSCFESSP 877

Query: 202  DGELHGFRAPAEPQGCSFRREPSY-FEIPTKETPQPSQPPE--VPAHEMPTKDAEAGGGG 258
            D EL   R P+    CS    P      P +++P  S  P+  V A   P + + +G   
Sbjct: 878  DPELKS-RTPSR-HSCSGSSPPRVKSSTPPRQSPSRSSSPQPKVKAIISPRQRSHSGSSS 935

Query: 259  AAPVVQSHASFTIEFDDCSPGKMKIKDHITKFSLRQRRPPGKEATPGEMVSAETKVADWL 318
             +P   +  +        SP        + ++S      P  +  P    +   +     
Sbjct: 936  PSPSRVTSRTTPRRSRSVSPCSNVESRLLPRYSHSGSSSPDTKVKPE---TPPRQSHSGS 992

Query: 319  VQNDPSLLHRVGPGDDRHSTKSDLPVHTRTLKGHKHEDGTQSDSEDPLAKAAS--AAGVP 376
            +   P +  +  PG     +KS  P         K +D         L+  A   ++  P
Sbjct: 993  ISPYPKVKAQTPPGPSLSGSKSPCPQE-------KSKDSLVQSCPGSLSLCAGVKSSTPP 1045

Query: 377  LEA--SGEQVRLQRQIKRDPQELLHNQQAFVIEFFDEDTPRKKRSQSFTHSPSGDPKADK 434
             E+      ++L+ Q +  P          V +   E    + +SQ+        PK  +
Sbjct: 1046 GESYFGVSSLQLKGQSQTSPDHRSDTSSPEVRQSHSESPSLQSKSQT-------SPKGGR 1098

Query: 435  RRGPTPADRDRPSVPAPVQAGGRSSGPQRAGSLKREKTEERLGSPSPASRTPARPFGSVG 494
             R  +P        P     G  S+ P     LK   + E+    S +S  P     S+ 
Sbjct: 1099 SRSSSPVTELASRSPIRQDRGEFSASPM----LKSGMSPEQSRFQSDSSSYPTVDSNSLL 1154

Query: 495  RRSRL----AQDFMAQCLRESSPAARPSPEKVPPVLPAPLTPHGTSPVGPPT--PPPAPT 548
             +SRL    +++ MA   +E + A+ P  +      P    P  +S V   T   PP   
Sbjct: 1155 GQSRLETAESKEKMALPPQEDATASPPRQKDKFSPFPVQDRPE-SSLVFKDTLRTPPRER 1213

Query: 549  DPQLTKARKQEEDDSLSDAGTYTIETEAQDTE----VEEARKMIDQVFGVLESPELSRAS 604
                +    +E++ +L         T +QD E    VE++ +   Q+   L S EL   S
Sbjct: 1214 SGAGSSPETKEQNSALP--------TSSQDEELMEVVEKSEEPAGQILSHLSS-ELKEMS 1264

Query: 605  SATF--------RPVIRGDRDESDDGGVAQRMALLQEFASRPLGAAPQAEHQGLPVPG-- 654
            ++ F        RP +    D+S                        QA  + + VP   
Sbjct: 1265 TSNFESSPEVEERPAVSLTLDQSQS----------------------QASLEAVEVPSMA 1302

Query: 655  -SPGGQKWVSRWASLADSYSDPGLTEDGLGRRGGEPEGSLPVRMRRRLPQLPSERADSPA 713
             S GG  +      L++S     L E+  G          P+  R   P L +E     +
Sbjct: 1303 SSWGGPHFSPEHKELSNS----PLRENSFGS---------PLEFRNSGP-LGTEMNTGFS 1348

Query: 714  GPESSRRSGP------GPPELD-SEQPSRLFGQE--ELDPDSLSDASGSDGGRGPEP--- 761
                   +GP        P LD  EQ +R  G    EL PD++  A  S       P   
Sbjct: 1349 SEVKEDLNGPFLNQLETDPSLDMKEQSTRSSGHSSSELSPDAVEKAGMSSNQSISSPVLD 1408

Query: 762  GVEPQDSRRRSPQ-EGPTWSRGRRSPRAPGEPTPASFFIGDQNGDAVLSRKPLAAPGDGE 820
             V    SR RS     P    G   PR P   + +    G ++G    SR  L+  G   
Sbjct: 1409 AVPRTPSRERSSSASSPEMKDGL--PRTPSRRSRSGSSPGLRDGSGTPSRHSLS--GSSP 1464

Query: 821  GLGQTAQPSPPARDGVYVSANGRMVIQLRPGRSPEPDGPAPAFLRQESFTKE-PASGPPA 879
            G+    +     R     S   + + Q    RS  P  P    L  +  T +   SG  +
Sbjct: 1465 GMKDIPRTPSRGRSECDSSPEPKALPQTPRPRSRSPSSPE---LNNKCLTPQRERSGSES 1521

Query: 880  PGKPPHISSHPLLQDLAATRAARMDFHSQDTHLILKETETALAALEARLLSNSVDAECEG 939
                  ++  PL Q   +  +  +D                 A+ + R  S+S       
Sbjct: 1522 SVDQKTVARTPLGQRSRSGSSQELDVKPS-------------ASPQERSESDSSPDSKAK 1568

Query: 940  GSTPRPPEDALSGDSDVDTASTVSLRSGKSGPSPTTPQPLRAQKEM---SPSPPAAQDPG 996
              TP           +VD+ S +S R  +SG SP      RA       S S P  + P 
Sbjct: 1569 TRTPLRQRSRSGSSPEVDSKSRLSPRRSRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPA 1628

Query: 997  GTALVS-AREQSSERQHHPL----GPTDMGRGEPVRRSAIRRGHR----PRGSLDWPSEE 1047
              AL   +R  SS +   P       T+     P +    RRG R    P+     P   
Sbjct: 1629 PRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRR 1688

Query: 1048 RG----PVL---AHLPSSDVMASNHETPEATGAGRLGSRRKPAAPPPSPAAREEQSR--- 1097
            R     P L   A L      AS+  +PE         RR P+   P PA +   SR   
Sbjct: 1689 RSSRSSPELTRKARLSRRSRSASS--SPETRSRTPPRHRRSPSVSSPEPAEKSRSSRRRR 1746

Query: 1098 ------SSASSQKG------PQALTRSNSLSTPRPTRASRLR----------RARLGDAS 1135
                  +  +S++G      P+ L RS S S    TR +R R          R R    S
Sbjct: 1747 SASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRS 1806

Query: 1136 DTEAADGERGSLG--NPEPVGRPAAEQAKKLSRLDILAMP--RKRAGSFTGT-----SDP 1186
             +      RG  G  +  P  + ++  + +  R      P  RKR+ S T       S  
Sbjct: 1807 RSRVTRRRRGGSGYHSRSPARQESSRTSSRRRRGRSRTPPTSRKRSRSRTSPAPWKRSRS 1866

Query: 1187 EAAPARTSFSGRSVELCCASRKPTMAEARAVSRKAANTATTTGPRQPFSRARSGSARYTS 1246
             A+PA    S     L   SR+ + +    VSR+ + + T+   R+  SRA S  +R  S
Sbjct: 1867 RASPATHRRSRSRTPLI--SRRRSRSRTSPVSRRRSRSRTSVTRRRSRSRA-SPVSRRRS 1923

Query: 1247 TTQTPRAGSSSRARSRAPGPR 1267
             ++TP   +  R+RSR P  R
Sbjct: 1924 RSRTPPV-TRRRSRSRTPTTR 1943



 Score = 69.7 bits (169), Expect = 2e-11
 Identities = 146/659 (22%), Positives = 223/659 (33%), Gaps = 95/659 (14%)

Query: 711  SPAGPESSRRSGPGPPELDSEQPSRLFGQEELDPDSLSDASGSDGGRGPEPGVEPQDSRR 770
            S  G  S++R  P  PE  ++QPS  +  ++ D    S    S        G EP     
Sbjct: 311  SEPGTTSTQR--PSSPETATKQPSSPYEDKDKDKKEKSATRPSPSPERSSTGPEP----- 363

Query: 771  RSPQEGPTWSRGRRSPRAPGEPTPASFFIGDQNGDAVLSRKPLAAPGDGEGLGQTAQPSP 830
              P   P  +      R  G P P +           LS++P+  P +       + P  
Sbjct: 364  --PAPTPLLAE-----RHGGSPQPLA--------TTPLSQEPVNPPSEASPTRDRSPPKS 408

Query: 831  PARDGVYVSANGRMVIQLRPGRSPEPDGPAPA---FLRQESFTKEPASGPPAPGKPPHIS 887
            P +              L    S E   P+P      R  S + E     PAPG    IS
Sbjct: 409  PEK--------------LPQSSSSESSPPSPQPTKVSRHASSSPESPKPAPAPGSHREIS 454

Query: 888  SHPLLQDLAATRAARMDFHSQDTHLILKETETALAALEARLLSNSVDAECEGGSTPRPPE 947
            S P  ++ +  RA R   HS      +  + +   A   R  S S      G S  R P+
Sbjct: 455  SSPTSKNRSHGRAKRDKSHSHTPSRRMGRSRSPATAKRGR--SRSRTPTKRGHSRSRSPQ 512

Query: 948  DALSGDSDVDTASTVSLRSGKSGPSPTTPQPLRAQKEMSPSPPAAQDPGGTALVSAREQS 1007
               S  +          R G+S        P R  +  SP  P       T        +
Sbjct: 513  WRRSRSAQ---------RWGRS------RSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSA 557

Query: 1008 SERQHHPLGPTDMGRGEPVRRSAIRRGH-RPRGSLDWPSEERGPVLAHLPSSDVMASNHE 1066
               + H   P   GR     R+  RRG  R R      S  R P            S   
Sbjct: 558  RRGRSHSRSPATRGRSR--SRTPARRGRSRSRTPARRRSRSRTPTRRR--------SRSR 607

Query: 1067 TPEATGAGRLGSRRKPAAPPPSPAAREEQSRSSA-----SSQKGPQALTRSNSLSTPRPT 1121
            TP   G  R  +  +  +   SP  R  +SRS A     S  + P    RS S +  R  
Sbjct: 608  TPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRG 667

Query: 1122 RASRLRRARLGDASDTEAADGERGSLGNPEPVGRPAAEQAKKLSRLDILAMPRK-RAGSF 1180
            R+     AR    S +        S       GR  +    +  R       R+ R+GS 
Sbjct: 668  RSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSS 727

Query: 1181 TGTSDPEAAPARTSFSGRSVEL------CCASRKPTMAEARAVSR---KAANTATTTGPR 1231
            +   +      R S S  S E+         SR  +   ++A SR   + + + ++  P+
Sbjct: 728  SERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSKAKSRLSLRRSLSGSSPCPK 787

Query: 1232 Q----PFSRARSGSARYTSTTQTP----RAGSSSRARSRAPGPRDTDDDEEEPDPYGFIV 1283
            Q    P  R+RSGS++  + ++TP    R+ SS   + ++  P         P P    V
Sbjct: 788  QKSQTPPRRSRSGSSQPKAKSRTPPRRSRSSSSPPPKQKSKTPSRQSHSSSSPHPK---V 844

Query: 1284 QTAEIAEIARLSQTLVKDVAILAQ--EIHDVAGDGDTLGSSEPAHSASLSNMPSTPAST 1340
            ++        ++     + ++  Q     + + D +    +   HS S S+ P   +ST
Sbjct: 845  KSGTPPRQGSITSPQANEQSVTPQRRSCFESSPDPELKSRTPSRHSCSGSSPPRVKSST 903



 Score = 59.3 bits (142), Expect = 3e-08
 Identities = 201/892 (22%), Positives = 295/892 (33%), Gaps = 167/892 (18%)

Query: 422  FTHSPSGDPKADKRRGPTPADRDRPSVPAP--VQAGGRSSGPQRAG----SLKREKTEER 475
            F +    DP  D +   T +     S  +P  V+  G SS    +     ++ R  + ER
Sbjct: 1359 FLNQLETDPSLDMKEQSTRSSGHSSSELSPDAVEKAGMSSNQSISSPVLDAVPRTPSRER 1418

Query: 476  LGSPSPASRTPARPFGSVGRRSRLAQDFMAQCLRESS--PAARPSPEKVPPVLPAPLTP- 532
              S S    +P    G     SR ++   +  LR+ S  P+        P +   P TP 
Sbjct: 1419 SSSAS----SPEMKDGLPRTPSRRSRSGSSPGLRDGSGTPSRHSLSGSSPGMKDIPRTPS 1474

Query: 533  HGTSPV-GPPTPPPAPTDPQLTKARKQEEDDSLSDAGTYTIETEAQDTEVEE---ARKMI 588
             G S     P P   P  P+  ++R     +  +   T   E    ++ V++   AR  +
Sbjct: 1475 RGRSECDSSPEPKALPQTPR-PRSRSPSSPELNNKCLTPQRERSGSESSVDQKTVARTPL 1533

Query: 589  DQVFGVLESPELSRASSATFRPVIRGDRDESDDGGVAQRMALLQEFASRPLGAAPQAEHQ 648
             Q      S EL    SA+  P  R + D S D     R  L Q   S   G++P+ + +
Sbjct: 1534 GQRSRSGSSQELDVKPSAS--PQERSESDSSPDSKAKTRTPLRQRSRS---GSSPEVDSK 1588

Query: 649  GLPVPGSPGGQKWVSRWASLADSYSDPGLTEDGLGRRGGEPEGSLPVRMRRRLPQLPSER 708
                P                              R G  PE      ++ +    P  +
Sbjct: 1589 SRLSPRR---------------------------SRSGSSPE------VKDKPRAAPRAQ 1615

Query: 709  ADSPAGPESSRRSGPGPPELDSEQPSRLFGQEELDPDSLSDASGSDGGRGPEPGVEPQDS 768
            + S + PE      P P  L    P R          S S +S    G    P  E   S
Sbjct: 1616 SGSDSSPEPK---APAPRAL----PRR----------SRSGSSSKGRG----PSPEGSSS 1654

Query: 769  RRRSPQEGPTWSRGRRSPRAPGEP-----TP----ASFFIGDQNGDAVLSRKPLAAPGDG 819
               SP+  P     RR  R+  EP     TP    +S    +    A LSR+  +A    
Sbjct: 1655 TESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASSSP 1714

Query: 820  EGLGQTAQPSPPARDGVYVSANGRMVIQLRPGRSPEPDGPAPAFLRQESFTKEPASGP-- 877
            E    T   +PP                 R  RSP    P PA   + S  +  AS P  
Sbjct: 1715 E----TRSRTPP-----------------RHRRSPSVSSPEPAEKSRSSRRRRSASSPRT 1753

Query: 878  ---------PAPGKPPHISSHPLLQDLAATRAARMDFHSQDTHLILKETETALAALEARL 928
                     P+P KP  +           TR  R    S  +    +  + + +      
Sbjct: 1754 KTTSRRGRSPSP-KPRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRS------ 1806

Query: 929  LSNSVDAECEGGS-----TPRPPEDALSGDSDVDTASTVSLRSGKSGPSPTTPQPLRAQK 983
              + V     GGS     +P   E + +        S     S K   S T+P P +  +
Sbjct: 1807 -RSRVTRRRRGGSGYHSRSPARQESSRTSSRRRRGRSRTPPTSRKRSRSRTSPAPWKRSR 1865

Query: 984  EMSPSPPAAQDPGGTALVSAREQSSERQHHPLGPTDMGRGEPVRRSAIRRGHRPRGSLDW 1043
              +      +    T L+S R   S        P    R    R S  RR  R R S   
Sbjct: 1866 SRASPATHRRSRSRTPLISRRRSRSR-----TSPVSRRRSRS-RTSVTRRRSRSRAS--- 1916

Query: 1044 PSEERGPVLAHLPSSDVMASNHETPEATGAGRLGSRRKPAAPPPSPAAREEQSRSSASSQ 1103
                R    +  P      S   TP  T   R  SR  P     S +     +R  + S+
Sbjct: 1917 -PVSRRRSRSRTPPVTRRRSRSRTP--TTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSR 1973

Query: 1104 KGPQALTRSNSLSTPRPTRASRLRRARLGDASDTEAADGERGSLGNPEPVGR-------P 1156
              P    RS S ++P   R SR R + +            R S     PV R       P
Sbjct: 1974 TSPITRRRSRSRTSPVTRRRSRSRTSPV----------TRRRSRSRTSPVTRRRSRSRTP 2023

Query: 1157 AAEQAKKLSRLDILAMPRKRAGSFTGTSDPEAAPARTSFSGRSVELCCASRKPTMAEARA 1216
             A + +  SR  +L  PRKR+ S +  +    + +RT  + R       +R P     R+
Sbjct: 2024 PAIRRRSRSRTPLL--PRKRSRSRSPLAIRRRSRSRTPRTARGKR--SLTRSPPAIRRRS 2079

Query: 1217 VSRKAANTATTTGPRQPFSRARSGSARYTSTTQTPRAGSSSRARSRAPGPRD 1268
             S  +++ + +  P  P +R  SGS        + R    SR  S +P P D
Sbjct: 2080 ASGSSSDRSRSATP--PATRNHSGSRTPPVALNSSRMSCFSRP-SMSPTPLD 2128



 Score = 58.2 bits (139), Expect = 6e-08
 Identities = 187/884 (21%), Positives = 284/884 (32%), Gaps = 97/884 (10%)

Query: 415  RKKRSQSFTHSPSGDPKADKRRGPTPADRDRPSVPAPVQAGGRSSGPQRAGSLKREKTEE 474
            RKK S+   H    + K  K R PTP  + +       +   RS+ P          T  
Sbjct: 209  RKKSSKKKKHRSESESKKRKHRSPTPKSKRKSK--DKKRKRSRSTTPAPKSRRAHRSTSA 266

Query: 475  RLGSPSPASRTPARPFGSVGRRSRLAQDFMAQCLRESSPAARPSPEKVPPVLPAPLTPHG 534
               S S  SR+ +R   +    + LA        R  SPA+    E   P    P T   
Sbjct: 267  DSASSSDTSRSRSRSAAAKTHTTALAG-------RSPSPASGRRGEGDAP-FSEPGTTST 318

Query: 535  TSPVGPPTPPPAPTDPQLTKARKQEEDDSLSDAGTYTIETEAQDTEVEEARKMIDQVFGV 594
              P  P T    P+ P   K + ++E  +   +   + E  +   E      ++ +  G 
Sbjct: 319  QRPSSPETATKQPSSPYEDKDKDKKEKSATRPSP--SPERSSTGPEPPAPTPLLAERHG- 375

Query: 595  LESPELSRASSATFRPV-----IRGDRDESDDGGVAQRMALLQEFASRPLGAAPQAEHQG 649
              SP+    +  +  PV         RD S      +   L Q  +S     +PQ     
Sbjct: 376  -GSPQPLATTPLSQEPVNPPSEASPTRDRSPPKSPEK---LPQSSSSESSPPSPQPTKVS 431

Query: 650  LPVPGSPGGQKWVSRWASLADSYSDPGLTEDGLGRRGGEPEGSLPVRMRRRLPQLPSERA 709
                 SP   K      S  +  S P       GR   +   S            PS R 
Sbjct: 432  RHASSSPESPKPAPAPGSHREISSSPTSKNRSHGRAKRDKSHS----------HTPSRRM 481

Query: 710  DSPAGPESSRRSGPGPPELDSEQPSRLFGQEELDPDSLSDASGSDGGRGPEPGVEPQDSR 769
                 P +++R         S  P++        P      S    GR   P    +  R
Sbjct: 482  GRSRSPATAKRG-----RSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSP---QRRGR 533

Query: 770  RRSPQEGPTWSRGRRSPRAPGEPTPASFFIGDQNGDAVLSRKPLAAPGDGEGLGQTAQPS 829
             RSPQ  P WSR R + R  G    A          A   R     P      G++   +
Sbjct: 534  SRSPQR-PGWSRSRNTQRR-GRSRSARRGRSHSRSPATRGRSRSRTPA---RRGRSRSRT 588

Query: 830  PPARDGVYVSANGRMVIQLRPGRSPEPDGPAPAFLRQESFTKEPASGPPAPGKPPHISSH 889
            P  R     +   R      P R        PA  R+ S T+ P         P   S  
Sbjct: 589  PARRRSRSRTPTRRRSRSRTPARRGRSRSRTPA--RRRSRTRSPVRRRSRSRSPARRSG- 645

Query: 890  PLLQDLAATRAARMDFHSQDTHLILKETETALAALEARLLSNSVDAECEGGSTPRPPEDA 949
               +  + T A R    S+      +      A    R  S S      G S  R P   
Sbjct: 646  ---RSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGR--SRSRTPARRGRSRSRTPRRG 700

Query: 950  LSGDSDV----DTASTVSLRSGKSGPSPTTPQPLRAQKEMSPSPPAAQDPGGTALVSARE 1005
             S    +     + S    R G+SG S       R  +  S S  + +       +    
Sbjct: 701  RSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPE-------MKKSR 753

Query: 1006 QSSERQHHPLGPTDMGRGEPVRRSAIRRGHRPRGSLDWPSEERGPVLAHLPSSDVMASNH 1065
             SS R      P    R +   R ++RR             +  P  +   SS   A + 
Sbjct: 754  ISSRRSRSLSSP----RSKAKSRLSLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPKAKSR 809

Query: 1066 ETPEATGAGRLGSRRKPAAPPPSPAAREEQSRSSASSQKGPQALT----RSNSLSTPRPT 1121
              P  +        R  ++PPP   ++    +S +SS   P+  +    R  S+++P+  
Sbjct: 810  TPPRRS--------RSSSSPPPKQKSKTPSRQSHSSSSPHPKVKSGTPPRQGSITSPQAN 861

Query: 1122 RAS--RLRRARLGDASDTE--AADGERGSLGNPEP----VGRPAAEQAKKLS----RLDI 1169
              S    RR+    + D E  +    R S     P       P  +   + S    ++  
Sbjct: 862  EQSVTPQRRSCFESSPDPELKSRTPSRHSCSGSSPPRVKSSTPPRQSPSRSSSPQPKVKA 921

Query: 1170 LAMPRKRAGSFTGTSDPEAAPARTS-FSGRSVELCCASRKPTMAEARAVSRKAANTATTT 1228
            +  PR+R+ S + +  P    +RT+    RSV  C  S   +    R     +++  T  
Sbjct: 922  IISPRQRSHSGSSSPSPSRVTSRTTPRRSRSVSPC--SNVESRLLPRYSHSGSSSPDTKV 979

Query: 1229 GPRQPFSRARSGS-ARYTST-TQTPRAGSSSRARSRAPGPRDTD 1270
             P  P  ++ SGS + Y     QTP   S S ++S  P  +  D
Sbjct: 980  KPETPPRQSHSGSISPYPKVKAQTPPGPSLSGSKSPCPQEKSKD 1023



 Score = 55.8 bits (133), Expect = 3e-07
 Identities = 185/813 (22%), Positives = 269/813 (33%), Gaps = 119/813 (14%)

Query: 672  YSDPGLTEDGLGRRGGEPEGSLPVRMRRRLPQLPSERADSPAGPESSRRSGPGP------ 725
            +S+PG T     +R   PE +       + P  P E  D     +S+ R  P P      
Sbjct: 310  FSEPGTTST---QRPSSPETAT------KQPSSPYEDKDKDKKEKSATRPSPSPERSSTG 360

Query: 726  PELDSEQPSRLFGQEELDPDSLSDASGSDGGRGPEPGVEPQDSRR--RSPQEGPTWSRGR 783
            PE  +  P  L  +    P  L+    S     P     P   R   +SP++ P  S   
Sbjct: 361  PEPPAPTPL-LAERHGGSPQPLATTPLSQEPVNPPSEASPTRDRSPPKSPEKLPQSSSSE 419

Query: 784  RSPRAPGEPTPASFFIGDQNGDAVLSRKPLAAPGDGEGLGQTAQPSPPARDGVYVSANGR 843
             SP +P +PT  S         +  S KP  APG    +  +      +        +  
Sbjct: 420  SSPPSP-QPTKVS----RHASSSPESPKPAPAPGSHREISSSPTSKNRSHGRAKRDKSHS 474

Query: 844  MVIQLRPGRSPEPDGPAPAFLRQESFTKEPASGPPAPGKPPHISSHPLLQDLAATRAARM 903
                 R GRS  P        R  + TK   S   +P      S+    +  +  R  R 
Sbjct: 475  HTPSRRMGRSRSPATAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRGRS 534

Query: 904  DFHSQDTHLILKETETALAALEARL-LSNSVDAECEGGSTPRPPEDALSGDSDVDTASTV 962
                +      + T+    +  AR   S+S      G S  R P  A  G S   T +  
Sbjct: 535  RSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTP--ARRGRSRSRTPARR 592

Query: 963  SLRS-------------GKSGPSPTTPQPLRAQKEMSP-------SPPAAQDPGGTALVS 1002
              RS              + G S +     R  +  SP         PA +     +   
Sbjct: 593  RSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTP 652

Query: 1003 AREQSSERQHHPLGPTDMGRGE---PVRRSAIRRGHRP--RGSLDWPSEERGPVLAHLPS 1057
            AR   S  +     P   GR     P RRS   R   P  RG     S  R P      S
Sbjct: 653  ARRGRSRSRT----PARRGRSRSRTPARRSGRSRSRTPARRGR----SRSRTPRRGRSRS 704

Query: 1058 SDVMA---SNHETPEATGAGRLGSRRKPAAPPPSPAAREEQSRSSASSQKGPQALTRSNS 1114
              ++    S+  TP+  G     S RK  +     + R  +S SS   +K   +  RS S
Sbjct: 705  RSLVRRGRSHSRTPQRRGRSGSSSERKNKS---RTSQRRSRSNSSPEMKKSRISSRRSRS 761

Query: 1115 LSTPRPTRASRLRRARLGDASDTEAADGERGSLGNPEPVGRPAAEQAKKLSRLDILAMPR 1174
            LS+PR    SRL   R    S + ++   +     P    R  + Q K  SR       R
Sbjct: 762  LSSPRSKAKSRLSLRR----SLSGSSPCPKQKSQTPPRRSRSGSSQPKAKSR---TPPRR 814

Query: 1175 KRAGSFTGTSDPEAAPARTSFSGRSVELCCASRKPTMAEARAVSRKAANTATTTGPRQ-- 1232
             R+ S          P+R S S  S      S  P      +++   AN  + T  R+  
Sbjct: 815  SRSSSSPPPKQKSKTPSRQSHSSSSPHPKVKSGTP--PRQGSITSPQANEQSVTPQRRSC 872

Query: 1233 ------PFSRARSGSARYTSTTQTPRAGSS-----SRARSRAPGPR---------DTDDD 1272
                  P  ++R+ S    S +  PR  SS     S +RS +P P+          +   
Sbjct: 873  FESSPDPELKSRTPSRHSCSGSSPPRVKSSTPPRQSPSRSSSPQPKVKAIISPRQRSHSG 932

Query: 1273 EEEPDPYGFIVQTAEIAEIARLSQTLVKDVAILAQEIHDVAGDGDTLGSSE----PAHSA 1328
               P P     +T        +S     +  +L +  H  +   DT    E     +HS 
Sbjct: 933  SSSPSPSRVTSRTTP-RRSRSVSPCSNVESRLLPRYSHSGSSSPDTKVKPETPPRQSHSG 991

Query: 1329 SLSNMPSTPASTISAREELVQRIPEASLNFQKVPPGSLNSRDFDQNMNDSCEDALA---- 1384
            S+S  P   A T           P  SL+  K P     S+D   ++  SC  +L+    
Sbjct: 992  SISPYPKVKAQT----------PPGPSLSGSKSPCPQEKSKD---SLVQSCPGSLSLCAG 1038

Query: 1385 -NKTRPRNREEVIFDNLMLNPVSQLSQAIRENT 1416
               + P         +L L   SQ S   R +T
Sbjct: 1039 VKSSTPPGESYFGVSSLQLKGQSQTSPDHRSDT 1071



 Score = 55.1 bits (131), Expect = 5e-07
 Identities = 99/411 (24%), Positives = 138/411 (33%), Gaps = 76/411 (18%)

Query: 441  ADRDRPSVPAPVQAGGRSSGPQRAGSLKREKTEERLGSPSPASRTPARPFGS--VGRRS- 497
            AD   P+ PA   AG R+     A SL    T     +   +SRTP  P  +  VG RS 
Sbjct: 2285 ADPRTPTAPAVNLAGARTPAALAALSLTGSGTPPTAANYPSSSRTPQAPASANLVGPRSA 2344

Query: 498  ------RLAQDFMAQCLRESS-PAARPSPEKVPPVLPAPLTP-----HGTSPVGPP---- 541
                   +A    A  L  +S  +AR +P      L +P  P       +    PP    
Sbjct: 2345 HATAPVNIAGSRTAAALAPASLTSARMAPALSGANLTSPRVPLSAYERVSGRTSPPLLDR 2404

Query: 542  ----TPPPAPTDPQLTKARKQEEDDSLSDAGTYTIETEAQDTEVEEARKMIDQVFGVLES 597
                TPP AP+  ++T  R       +  A + ++   AQD    + R  +   F     
Sbjct: 2405 ARSRTPPSAPSQSRMTSERAPSPSSRMGQAPSQSLLPPAQD----QPRSPVPSAFS---- 2456

Query: 598  PELSRASSATFRPVIRGDRDESDDGGVAQRMALLQEFASRPLGAAPQAEHQGLPVPGSPG 657
             + SR   A   PV          G VA   +   +        AP   H  +  P +  
Sbjct: 2457 -DQSRCLIAQTTPV--AGSQSLSSGAVATTTSSAGDHNGMLSVPAPGVPHSDVGEPPAST 2513

Query: 658  GQKWVSRWASL------------------ADSYSDPGLTEDGLGRRGGEPEG-SLPVRMR 698
            G +  S  A+L                  + S S    +    G    + EG SLPV+  
Sbjct: 2514 GAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPE 2573

Query: 699  RRLPQLPSERADSPAGPESSRRSGPGPP------------------ELDSEQPSRLFGQE 740
              L ++PS    +PA  E+ R   P  P                     S   S      
Sbjct: 2574 VALKRVPS---PTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSS 2630

Query: 741  ELDPDSLSDASGSDGGRGPEPGVE-PQD-SRRRSPQEGPTWSRGRRSPRAP 789
                 S S +S S     P P    PQ   +  SP++ P   R  RSPR P
Sbjct: 2631 SSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPPPGERRSRSPRKP 2681



 Score = 53.5 bits (127), Expect = 2e-06
 Identities = 203/917 (22%), Positives = 303/917 (33%), Gaps = 173/917 (18%)

Query: 416  KKRSQSFTHSPSGDPKADKRRGPTPADRDRPSVPAPVQAGGRSSGPQRAGSLKREKTEER 475
            +KRS+S T SP+   ++  R  P    R R   P   +   RS    R   + R ++  R
Sbjct: 1849 RKRSRSRT-SPAPWKRSRSRASPATHRRSRSRTPLISRRRSRS----RTSPVSRRRSRSR 1903

Query: 476  LGSPSPASRTPARPFGSVGRRSRLAQDFMAQCLRESSPAARPSPEKVPPVL-------PA 528
                   SR+ A P      RSR       +    +    R S  + PPV          
Sbjct: 1904 TSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTP 1963

Query: 529  PLTPHG----TSPV---------GPPTP--PPAPTDPQLTKARKQEEDDSLSDAGTYTIE 573
            P+T       TSP+          P T     + T P +T+ R +     ++   + +  
Sbjct: 1964 PVTRRRSRSRTSPITRRRSRSRTSPVTRRRSRSRTSP-VTRRRSRSRTSPVTRRRSRSRT 2022

Query: 574  TEAQDTEVEEARKMIDQVFGVLESPELSRASSATFRP-VIRGDRDESDDGGVAQRMALLQ 632
              A          ++ +      SP   R  S +  P   RG R  +      +R +   
Sbjct: 2023 PPAIRRRSRSRTPLLPRKRSRSRSPLAIRRRSRSRTPRTARGKRSLTRSPPAIRRRSASG 2082

Query: 633  EFASRPLGAAPQA--EHQGLPVPGSPGGQKWVSRWASLADSYSDPGLTEDGLGRRGG--- 687
              + R   A P A   H G   P        V+  +S    +S P ++   L R      
Sbjct: 2083 SSSDRSRSATPPATRNHSGSRTPP-------VALNSSRMSCFSRPSMSPTPLDRCRSPGM 2135

Query: 688  -EPEGSLPVRMRRRLPQLPSERADSPAGPESSRRSGPGPPELDSEQPSRL----FGQEEL 742
             EP GS    M   L Q      D P GP          PE  ++    L          
Sbjct: 2136 LEPLGSSRTPMSV-LQQAGGSMMDGP-GPRIPDHQRTSVPENHAQSRIALALTAISLGTA 2193

Query: 743  DPDSLSDASGSDGGRGPEPGVEPQDSRRRSPQEG-----PTWSRGRR---SPRAPGEPTP 794
             P     A+G        P   P  S R +P        P  S       S R P  PT 
Sbjct: 2194 RPPPSMSAAGLAARMSQVPAPVPLMSLRTAPAANLASRIPAASAAAMNLASARTPAIPTA 2253

Query: 795  ASFFIGDQNGDAVLSRKPLAAPG-----DGEGLGQTAQPSPPARDGVYVSANGRMVIQLR 849
             +  + D    A  +   LA+P          L     P+ PA             + L 
Sbjct: 2254 VN--LADSRTPAAAAAMNLASPRTAVAPSAVNLADPRTPTAPA-------------VNLA 2298

Query: 850  PGRSPEPDGPAPAFLRQESFTKEPASGPPAPGKPPHISSHPLLQDLAATRAARMDFHSQD 909
              R+P       A     S T   A+  P+  + P     P   +L   R+A        
Sbjct: 2299 GARTP---AALAALSLTGSGTPPTAANYPSSSRTPQA---PASANLVGPRSAHAT----- 2347

Query: 910  THLILKETETALAALEARLLSNSVDAECEGGS--TPRPPEDALSGDSDVDTASTVSLRSG 967
              + +  + TA A   A L S  +     G +  +PR P  A    S     S   L   
Sbjct: 2348 APVNIAGSRTAAALAPASLTSARMAPALSGANLTSPRVPLSAYERVSG--RTSPPLLDRA 2405

Query: 968  KSGPSPTTPQPLRAQKEMSPSP-------------PAAQDPGGTALVSAREQSSE---RQ 1011
            +S   P+ P   R   E +PSP             P AQD   + + SA    S     Q
Sbjct: 2406 RSRTPPSAPSQSRMTSERAPSPSSRMGQAPSQSLLPPAQDQPRSPVPSAFSDQSRCLIAQ 2465

Query: 1012 HHPL-GPTDMGRGEPVRRSAIRRGHRPRGSLDWPSEERGPVLAHLPSSDVMASNHETPEA 1070
              P+ G   +  G     ++    H    S+  P          +P SDV     E P +
Sbjct: 2466 TTPVAGSQSLSSGAVATTTSSAGDHNGMLSVPAPG---------VPHSDV----GEPPAS 2512

Query: 1071 TGAGRLGSRRKPAAPPPSPAAREEQSRSSASSQKGPQALTRSNSLSTPRPTRASRLRRAR 1130
            TGA      ++P+A      A+E +S SS+SS     + + S+S S+             
Sbjct: 2513 TGA------QQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSS------------- 2553

Query: 1131 LGDASDTEAADGERGSLGNPEPVGRPAAEQAKKLSRLDILAMPRKRAGSFTGTSDPEAAP 1190
               +S + ++D E  SL    PV    A                KR  S      P  AP
Sbjct: 2554 --SSSGSSSSDSEGSSL----PVQPEVA---------------LKRVPS------PTPAP 2586

Query: 1191 ARTSFSGRSVELCCASRKPTMAEARAVSRKAANTATTTGPRQPFSRARSGSARYTSTTQT 1250
                  GR  E   A RK      R  S  ++++++++      S + S S+  +S++ +
Sbjct: 2587 KEAVREGRPPEPTPAKRK------RRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2640

Query: 1251 PRAGSSSRARSRAPGPR 1267
              + SSS      PGP+
Sbjct: 2641 SSSSSSSSPSPAKPGPQ 2657



 Score = 51.6 bits (122), Expect = 6e-06
 Identities = 251/1237 (20%), Positives = 397/1237 (32%), Gaps = 171/1237 (13%)

Query: 130  RSEALPEHTPYCEASNPRPEKGDRRPGTEAASYRTPLYGQPSWWGEDDG-----STLPDA 184
            RS + PE    C  +  R   G      +    RTPL GQ S  G         S  P  
Sbjct: 1498 RSPSSPELNNKC-LTPQRERSGSESSVDQKTVARTPL-GQRSRSGSSQELDVKPSASPQE 1555

Query: 185  QRQGEPYPE---RPKGPVQQDGELHGFRAPAEPQGCSFRREPSYFEIPTKETPQP----- 236
            + + +  P+   + + P++Q                S RR  S      K+ P+      
Sbjct: 1556 RSESDSSPDSKAKTRTPLRQRSRSGSSPEVDSKSRLSPRRSRSGSSPEVKDKPRAAPRAQ 1615

Query: 237  -----SQPPEVPAHEMPTKDAEAGGGGAAPVVQSHASFTIEFDDCSPGKMKIKDHITKFS 291
                 S  P+ PA     + + +G            S + E     P K +     ++ S
Sbjct: 1616 SGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSS 1675

Query: 292  LRQRRPPGKEATPGEMVSAETKVADWLVQNDPSLLHRVGPGDDRHSTKSDLPVHTRTLKG 351
                 P  K  TP    S+         ++ P L  +        S  S     +RT   
Sbjct: 1676 ---PEPKTKSRTPPRRRSS---------RSSPELTRKARLSRRSRSASSSPETRSRTPPR 1723

Query: 352  HKHEDGTQSDSEDPLAKAASAAGVPLEASGEQVRLQRQIKRDPQELLHNQQAFVIEFFDE 411
            H+      S   +P  K+ S+      AS  + +   +  R P       Q        E
Sbjct: 1724 HRRSPSVSSP--EPAEKSRSSRR-RRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRRE 1780

Query: 412  DTPRKKRSQSFTHSPSGDPKADKRRGPTPADRDRPSVPAPVQAGGRSSGPQRAGSLKREK 471
             T   +R        SG  ++  RR      R R +      +G  S  P R  S  R  
Sbjct: 1781 KTRTTRRRDR-----SGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQES-SRTS 1834

Query: 472  TEERLGSPSPASRTPARPFGSVGRRSRLAQDFMAQCLRESSPAARPSPEKVPPVLPAPLT 531
            +  R G     SRTP  P      RSR +     +    +SPA         P++    +
Sbjct: 1835 SRRRRGR----SRTP--PTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRS 1888

Query: 532  PHGTSPVGPPTPPPAPTDPQLTKARKQEEDDSLSDAGTYTIETEAQDTEVEEARKMIDQV 591
               TSPV       + +   +T+ R +     +S   + +  T         +R    + 
Sbjct: 1889 RSRTSPVSRRR---SRSRTSVTRRRSRSRASPVSRRRSRS-RTPPVTRRRSRSRTPTTRR 1944

Query: 592  FGVLESPELSRASSATFRPVIRGDRDESDDGGVAQRMALLQEFASRPLGAAPQAEHQGLP 651
                 +P ++R  S +  P +   R  S    + +R                ++  +  P
Sbjct: 1945 RSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRR----------------RSRSRTSP 1988

Query: 652  VPGSPGGQKWVSRWASLADSYSDPGLTEDGLGRRGGEPEGSLPVRMRRRLPQLPSERADS 711
            V      ++  SR + +    S    +     R       ++  R R R P LP +R+ S
Sbjct: 1989 VTR----RRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTPPAIRRRSRSRTPLLPRKRSRS 2044

Query: 712  PAGPESSRRSGPGPPELDSEQPSRLFGQEELDPDSLSDASGSDGGRGPEPGVEPQDSRRR 771
             +     RRS    P     + S       +   S S +S SD  R   P      S  R
Sbjct: 2045 RSPLAIRRRSRSRTPRTARGKRSLTRSPPAIRRRSASGSS-SDRSRSATPPATRNHSGSR 2103

Query: 772  SPQEGPTWSRGRRSPRAPGEPTPASFFIGDQNGDAVLSRKPLAAPGDGEGLGQTAQPSPP 831
            +P      SR     R    PTP             L R    +PG  E LG +  P   
Sbjct: 2104 TPPVALNSSRMSCFSRPSMSPTP-------------LDR--CRSPGMLEPLGSSRTPMSV 2148

Query: 832  ARD--GVYVSANGRMVIQLRPGRSPEPDGPAPAFLRQESFTKEPASGPP---APGKPPHI 886
             +   G  +   G  +   +    PE    +   L   + +   A  PP   A G    +
Sbjct: 2149 LQQAGGSMMDGPGPRIPDHQRTSVPENHAQSRIALALTAISLGTARPPPSMSAAGLAARM 2208

Query: 887  SSHP---------------LLQDLAATRAARMDFHSQDTHLILKETETALAALEARLLSN 931
            S  P               L   + A  AA M+  S  T  I     TA+   ++R  + 
Sbjct: 2209 SQVPAPVPLMSLRTAPAANLASRIPAASAAAMNLASARTPAI----PTAVNLADSRTPAA 2264

Query: 932  SVDAECEGGSTPRPPEDALSGDSDVDTASTVSLRSGKSGPSPTTPQPLRAQKEMSPSPPA 991
            +         T   P      D    TA  V+L   ++   P     L      +P P A
Sbjct: 2265 AAAMNLASPRTAVAPSAVNLADPRTPTAPAVNLAGART---PAALAALSLTGSGTP-PTA 2320

Query: 992  AQDPGGTALVSAREQSSERQHHPLGPTDMGRGEPVRRSAIRRGHRPRGSLDWPSEERGPV 1051
            A  P      S+R   +    + +GP       PV  +  R            S    P 
Sbjct: 2321 ANYPS-----SSRTPQAPASANLVGPRSAHATAPVNIAGSRTA-AALAPASLTSARMAPA 2374

Query: 1052 L--AHLPSSDVMASNHETPEATGAGRLGSRRKPAAPPPSPA-AREEQSRSSASSQKGPQA 1108
            L  A+L S  V  S +E      +  L  R +   PP +P+ +R    R+ + S +  QA
Sbjct: 2375 LSGANLTSPRVPLSAYERVSGRTSPPLLDRARSRTPPSAPSQSRMTSERAPSPSSRMGQA 2434

Query: 1109 LTRS------NSLSTPRPTRASRLRRARLGD---------------ASDTEAADGERGSL 1147
             ++S      +   +P P+  S   R  +                 A+ T +A    G L
Sbjct: 2435 PSQSLLPPAQDQPRSPVPSAFSDQSRCLIAQTTPVAGSQSLSSGAVATTTSSAGDHNGML 2494

Query: 1148 GNPEP------VGRPAAEQ-AKKLSRLDILAMPRKRAGSFTGTSDPEAAPARTSFSGRSV 1200
              P P      VG P A   A++ S L  L   ++R  S + +S   ++ + +S S  S 
Sbjct: 2495 SVPAPGVPHSDVGEPPASTGAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSS 2554

Query: 1201 ELCCASR-------------------KPTMAEARAVSRKAANTATTTGPRQPFSRARSGS 1241
                +S                     PT A   AV        T    ++  S + S S
Sbjct: 2555 SSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSS 2614

Query: 1242 ARYTSTTQTPRAGSSSRARSRAPGPRDTDDDEEEPDP 1278
            +  +S++ +  + SSS + S +     +      P P
Sbjct: 2615 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSP 2651



 Score = 51.2 bits (121), Expect = 8e-06
 Identities = 262/1288 (20%), Positives = 404/1288 (31%), Gaps = 247/1288 (19%)

Query: 145  NPRPEKGDRRPGTEAASYRTPLYGQPSWWGEDDGSTLPDAQRQGEPYPER--------PK 196
            +P PE+    P   A    TPL  +         +T P +Q    P  E         PK
Sbjct: 351  SPSPERSSTGPEPPAP---TPLLAERHGGSPQPLATTPLSQEPVNPPSEASPTRDRSPPK 407

Query: 197  GPVQQDGELHGFRAPAEPQGCSFRREPSYFEIPTKETPQPSQPPEVPAHEMPTKDAEAGG 256
             P +         +P  PQ     R  S      K  P P    E+ +   PT    + G
Sbjct: 408  SPEKLPQSSSSESSPPSPQPTKVSRHASSSPESPKPAPAPGSHREISSS--PTSKNRSHG 465

Query: 257  GGAAPVVQSHASFTIEFDDCSP-----GKMKIKDHITKFSLRQRRPPGKEATPGEMVSAE 311
                    SH          SP     G+ + +    +   R R P  + +   +     
Sbjct: 466  RAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRS 525

Query: 312  TKVADWLVQNDPSLLHRVGPGDDRHSTKSDLPVHTRTLKGHKHEDGTQ--SDSEDPLAKA 369
                       P    R G    R++ +       R  + H     T+  S S  P  + 
Sbjct: 526  RSPQRRGRSRSPQ---RPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRG 582

Query: 370  ASAAGVPLEA-------------SGEQVRLQRQIKRDPQELLHNQQAFVIEFFDEDTPRK 416
             S +  P                S    R  R   R P       ++ V       +P +
Sbjct: 583  RSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPAR 642

Query: 417  KRSQSFTHSPSGDPKADKRRGPTPADRDRPSVPAPVQAGGRSSG--PQRAGSLKREKTEE 474
            +  +S + +P+   +  + R  TPA R R     P +  GRS    P R G   R +T  
Sbjct: 643  RSGRSRSRTPA---RRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGR-SRSRTPR 698

Query: 475  RLGSPSPA--------SRTPARP--FGSVGRRSRLAQDFMAQCLRESSPAARPSP----- 519
            R  S S +        SRTP R    GS   R   ++    +    SSP  + S      
Sbjct: 699  RGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRR 758

Query: 520  --------EKVPPVLPAPLTPHGTSPVGPPTPPPAPTDPQLTKARKQEEDDSLSDAGTYT 571
                     K    L    +  G+SP         P     T  R+     S   A + T
Sbjct: 759  SRSLSSPRSKAKSRLSLRRSLSGSSP--------CPKQKSQTPPRRSRSGSSQPKAKSRT 810

Query: 572  IETEAQDTEVEEARKMIDQVFGVLESPELSRASSATFRPVIRGDRDESDDGGVAQRMALL 631
                ++ +     ++         ++P     SS++  P ++         G   R   +
Sbjct: 811  PPRRSRSSSSPPPKQKS-------KTPSRQSHSSSSPHPKVKS--------GTPPRQGSI 855

Query: 632  QEFASRPLGAAPQAEHQGLPVPGSPGGQKWVSRWASLADSYSDPGLTEDGLGRRGGEPEG 691
                      +PQA  Q +             +  S  +S  DP L      R      G
Sbjct: 856  ---------TSPQANEQSV-----------TPQRRSCFESSPDPELKSRTPSRHSCS--G 893

Query: 692  SLPVRMRRRLP--QLPSERAD---------SPAGPESSRRSGPGPPELDSEQPSRLFGQE 740
            S P R++   P  Q PS  +          SP     S  S P P  + S    R     
Sbjct: 894  SSPPRVKSSTPPRQSPSRSSSPQPKVKAIISPRQRSHSGSSSPSPSRVTSRTTPRR--SR 951

Query: 741  ELDPDS-----LSDASGSDGGRGPEPGVEPQDSRRRSPQ--------------EGPTWSR 781
             + P S     L       G   P+  V+P+   R+S                 GP+ S 
Sbjct: 952  SVSPCSNVESRLLPRYSHSGSSSPDTKVKPETPPRQSHSGSISPYPKVKAQTPPGPSLS- 1010

Query: 782  GRRSPRAPGEPTPASFFIGDQNGDAVLSRKPLAAPGDGEG--------LGQTAQPSPPAR 833
            G +SP  P E +  S  +    G   L     ++   GE         L   +Q SP  R
Sbjct: 1011 GSKSP-CPQEKSKDSL-VQSCPGSLSLCAGVKSSTPPGESYFGVSSLQLKGQSQTSPDHR 1068

Query: 834  DGVYVSANGRMVIQLRPGRSPEPDGPAPAFLRQESFTKEPASGPPAPGKPPHISSHPLLQ 893
                     +   +    +S     P     R  S   E AS  P        S+ P+L+
Sbjct: 1069 SDTSSPEVRQSHSESPSLQSKSQTSPKGGRSRSSSPVTELASRSPIRQDRGEFSASPMLK 1128

Query: 894  DLAATRAARMDFHSQDTHLILKETETALAALEARLLSNSVDAECEGGSTPRPP--EDALS 951
               +   +R    S     +   +    + LE       +    +  +T  PP  +D  S
Sbjct: 1129 SGMSPEQSRFQSDSSSYPTVDSNSLLGQSRLETAESKEKMALPPQEDATASPPRQKDKFS 1188

Query: 952  G-------DSDV---DTASTVSLRSGKSGPSPTTPQ-----PLRAQ-KEMSPSPPAAQDP 995
                    +S +   DT  T       +G SP T +     P  +Q +E+      +++P
Sbjct: 1189 PFPVQDRPESSLVFKDTLRTPPRERSGAGSSPETKEQNSALPTSSQDEELMEVVEKSEEP 1248

Query: 996  GGTAL-----------VSAREQSSERQHHPLGPTDMGRGEPVRRSAIRRGHRPRGSLDWP 1044
             G  L            S  E S E +  P     + + +   ++++     P  +  W 
Sbjct: 1249 AGQILSHLSSELKEMSTSNFESSPEVEERPAVSLTLDQSQS--QASLEAVEVPSMASSWG 1306

Query: 1045 SEERGPVLAHLPSSDVMASNHETP-EATGAGRLGSRRKPA-----------------APP 1086
                 P    L +S +  ++  +P E   +G LG+                         
Sbjct: 1307 GPHFSPEHKELSNSPLRENSFGSPLEFRNSGPLGTEMNTGFSSEVKEDLNGPFLNQLETD 1366

Query: 1087 PSPAAREEQSRSS--ASSQKGPQALTRSN-----SLSTPRPTRASRL-RRARLGDASDTE 1138
            PS   +E+ +RSS  +SS+  P A+ ++      S+S+P      R   R R   AS  E
Sbjct: 1367 PSLDMKEQSTRSSGHSSSELSPDAVEKAGMSSNQSISSPVLDAVPRTPSRERSSSASSPE 1426

Query: 1139 AADGERGSLGNPEPVGRPAAEQAKKLSRLDILAMPRKRAGSFTGTSDPEAAPARTSFSGR 1198
              DG       P    R                  R R+GS  G  D    P+R S SG 
Sbjct: 1427 MKDGL------PRTPSR------------------RSRSGSSPGLRDGSGTPSRHSLSGS 1462

Query: 1199 SVELCCASRKPTMAEARAVSRKAANTATTTGPRQPFSRARSGSARYTS----TTQTPRAG 1254
            S  +    R P+   +   S           P+ P  R+RS S+   +    T Q  R+G
Sbjct: 1463 SPGMKDIPRTPSRGRSECDSSPEPKAL----PQTPRPRSRSPSSPELNNKCLTPQRERSG 1518

Query: 1255 SSS----RARSRAP-GPRDTDDDEEEPD 1277
            S S    +  +R P G R      +E D
Sbjct: 1519 SESSVDQKTVARTPLGQRSRSGSSQELD 1546



 Score = 50.4 bits (119), Expect = 1e-05
 Identities = 200/908 (22%), Positives = 318/908 (35%), Gaps = 147/908 (16%)

Query: 410  DEDTPRKKRSQSFTHSP-----SGDPKADKRRGPTPADRDRPSVPAPVQAGGRSSGPQ-- 462
            +E +   +R   F  SP     S  P      G +P  R + S P P Q+  RSS PQ  
Sbjct: 861  NEQSVTPQRRSCFESSPDPELKSRTPSRHSCSGSSPP-RVKSSTP-PRQSPSRSSSPQPK 918

Query: 463  -RAGSLKREKTEERLGSPSPA---SRTPARPFGSVGRRSRLAQDFMAQCLRESSPAARPS 518
             +A    R+++     SPSP+   SRT  R   SV   S +     ++ L   S +   S
Sbjct: 919  VKAIISPRQRSHSGSSSPSPSRVTSRTTPRRSRSVSPCSNVE----SRLLPRYSHSGSSS 974

Query: 519  PE-KVPPVLPAPLTPHGTSPVGPPTPPPAPTDPQLTKARKQEEDDSLSDAGTYTIETEAQ 577
            P+ KV P  P   +  G+    P      P  P            SLS + +   + +++
Sbjct: 975  PDTKVKPETPPRQSHSGSISPYPKVKAQTPPGP------------SLSGSKSPCPQEKSK 1022

Query: 578  DTEVEEARKMIDQVFGVLESPELSRASSATFRPVIRGDRDESDDGGVAQRMALLQEFASR 637
            D+ V+     +    GV  S     +        ++G    S D               R
Sbjct: 1023 DSLVQSCPGSLSLCAGVKSSTPPGESYFGVSSLQLKGQSQTSPD--------------HR 1068

Query: 638  PLGAAPQAEHQGLPVPGSPGGQKWVSRWASLADSYSDPGLTEDGLGRRGGEPEGSLPVRM 697
               ++P+        P               + S + P         +GG    S PV  
Sbjct: 1069 SDTSSPEVRQSHSESPSLQ------------SKSQTSP---------KGGRSRSSSPVTE 1107

Query: 698  RRRLPQLPSERADSPAGPESSRRSGPGPPELDSEQPSRLFGQEELDPDSLSDASGSDGGR 757
                  +  +R +  A P       P      S+  S       +D +SL   S  +   
Sbjct: 1108 LASRSPIRQDRGEFSASPMLKSGMSPEQSRFQSDSSS----YPTVDSNSLLGQSRLETAE 1163

Query: 758  GPEPGVEPQDSRRRSPQEGPTWSRGRRSPRAPGEPTPASFFIGDQNGDAVLSRKPLAAPG 817
              E    P       PQE  T S     PR   + +P  F + D+   +++ +  L  P 
Sbjct: 1164 SKEKMALP-------PQEDATAS----PPRQKDKFSP--FPVQDRPESSLVFKDTLRTP- 1209

Query: 818  DGEGLGQTAQPSPPARDGVYVSANGRMVIQLRPGRSPEPDGPAPAFLR---QESFTKEPA 874
              E  G  + P    ++    +++    +     +S EP G   + L    +E  T    
Sbjct: 1210 PRERSGAGSSPETKEQNSALPTSSQDEELMEVVEKSEEPAGQILSHLSSELKEMSTSNFE 1269

Query: 875  SGPPAPGKPPHISSHPLLQDLAATRAARMDF-------------HSQDTHLILKETETAL 921
            S P    +P    +    Q  A+  A  +               H + ++  L+E     
Sbjct: 1270 SSPEVEERPAVSLTLDQSQSQASLEAVEVPSMASSWGGPHFSPEHKELSNSPLRENSFG- 1328

Query: 922  AALEARLLSNSVDAECEGGSTPRPPEDALSGD--SDVDTASTVSLR---SGKSGPSPTTP 976
            + LE R  S  +  E   G +    ED L+G   + ++T  ++ ++   +  SG S +  
Sbjct: 1329 SPLEFRN-SGPLGTEMNTGFSSEVKED-LNGPFLNQLETDPSLDMKEQSTRSSGHSSSEL 1386

Query: 977  QPLRAQKEMSPSPPAAQDPGGTALVSAREQSSERQHHPLGPTDMGRGEPVRRSAIRRGHR 1036
             P   +K    S  +   P   A+   R  S ER      P +M  G P   S   R   
Sbjct: 1387 SPDAVEKAGMSSNQSISSPVLDAV--PRTPSRERSSSASSP-EMKDGLPRTPSRRSRSGS 1443

Query: 1037 PRGSLDWPSEERGPVLAHLPSSDVMASNHETPEATGAGRLGSRRKPAAPPPSPAAREEQS 1096
              G  D         L+   SS  M     TP + G     S  +P A P +P  R   S
Sbjct: 1444 SPGLRDGSGTPSRHSLSG--SSPGMKDIPRTP-SRGRSECDSSPEPKALPQTPRPR---S 1497

Query: 1097 RSSASSQKGPQALT----RSNSLSTPRPTRASRL---RRARLGDASDTEAADGERGSLGN 1149
            RS +S +   + LT    RS S S+      +R    +R+R G + + +     + S   
Sbjct: 1498 RSPSSPELNNKCLTPQRERSGSESSVDQKTVARTPLGQRSRSGSSQELDV----KPSASP 1553

Query: 1150 PEPVGRPAAEQAKKLSRLDILAMPRKRAGSFTGTSDPEAAPARTSFSGRSVELCCASRKP 1209
             E     ++  +K  +R  +    R R+GS            R S SG S E+     KP
Sbjct: 1554 QERSESDSSPDSKAKTRTPL--RQRSRSGSSPEVDSKSRLSPRRSRSGSSPEV---KDKP 1608

Query: 1210 TMAEARAVSRKAANTATTTGPRQPFSRARSGSARYTSTTQTPRAGSSSRARSRAP-GPRD 1268
                 RA  R  + + ++  P+ P  RA           +  R+GSSS+ R  +P G   
Sbjct: 1609 -----RAAPRAQSGSDSSPEPKAPAPRA---------LPRRSRSGSSSKGRGPSPEGSSS 1654

Query: 1269 TDDDEEEP 1276
            T+   E P
Sbjct: 1655 TESSPEHP 1662



 Score = 49.3 bits (116), Expect = 3e-05
 Identities = 180/873 (20%), Positives = 296/873 (33%), Gaps = 111/873 (12%)

Query: 413  TPRKKRSQSFTHSPSGDPKADKRRGPTPADRDRPSVPAPVQAGGRSSGPQRAGSLKREKT 472
            TP   R +S + +P+   ++  R  P    R R   P   +   RS    R   + R ++
Sbjct: 1927 TPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRS----RTSPITRRRS 1982

Query: 473  EERLGSPSPASRTPARPFGSVGRRSRLAQDFMAQCLRESSPAARPSPEKVPPVLP----- 527
              R  SP    R+ +R      RRSR          R S    R S  + PP +      
Sbjct: 1983 RSRT-SPVTRRRSRSRTSPVTRRRSRS---------RTSPVTRRRSRSRTPPAIRRRSRS 2032

Query: 528  -APLTPHGTSPVGPP----------TPPPAPTDPQLTKA----RKQEEDDSLSDAGTYTI 572
              PL P   S    P          TP  A     LT++    R++    S SD      
Sbjct: 2033 RTPLLPRKRSRSRSPLAIRRRSRSRTPRTARGKRSLTRSPPAIRRRSASGSSSDRSRSAT 2092

Query: 573  ETEAQDTEVEEARKMIDQVFGVLESPELSRASSATFRPVIRGDRDESDD-----GGVAQR 627
                ++        +       L S  +S  S  +  P    DR  S       G     
Sbjct: 2093 PPATRNHSGSRTPPV------ALNSSRMSCFSRPSMSPTPL-DRCRSPGMLEPLGSSRTP 2145

Query: 628  MALLQEFASRPL-GAAPQA-EHQGLPVPGSPGGQKWVSRWA--SLADSYSDPGLTEDGLG 683
            M++LQ+     + G  P+  +HQ   VP +    +        SL  +   P ++  GL 
Sbjct: 2146 MSVLQQAGGSMMDGPGPRIPDHQRTSVPENHAQSRIALALTAISLGTARPPPSMSAAGLA 2205

Query: 684  RRGGEPEGSLPVRMRRRLP------QLPSERADSPAGPESSRRSGPGPPEL---DSEQPS 734
             R  +    +P+   R  P      ++P+  A + A   +S R+   P  +   DS  P+
Sbjct: 2206 ARMSQVPAPVPLMSLRTAPAANLASRIPA--ASAAAMNLASARTPAIPTAVNLADSRTPA 2263

Query: 735  RLFGQEELDPDSLSDASG---SDGGRGPEPGVEPQDSRRRSPQEG---------PTWSRG 782
                     P +    S    +D      P V    +R  +             PT +  
Sbjct: 2264 AAAAMNLASPRTAVAPSAVNLADPRTPTAPAVNLAGARTPAALAALSLTGSGTPPTAANY 2323

Query: 783  RRSPRAPGEPTPASFFIGDQNGDAVLSRKPLAAPGDGEGLGQTAQPSPPARDGVYVSANG 842
              S R P  P  A+  +G ++  A        AP +  G  +TA    PA        + 
Sbjct: 2324 PSSSRTPQAPASANL-VGPRSAHAT-------APVNIAG-SRTAAALAPAS-----LTSA 2369

Query: 843  RMVIQLRPGRSPEPDGPAPAFLRQESFTKEPASGPPAPGKPPHISSHP-LLQDLAATRAA 901
            RM   L       P  P  A+ R    T  P         PP   S   +  + A + ++
Sbjct: 2370 RMAPALSGANLTSPRVPLSAYERVSGRTSPPLLDRARSRTPPSAPSQSRMTSERAPSPSS 2429

Query: 902  RMDFHSQDTHLILKETETALAALEARLLSNSVDAECEGGSTPRPPEDALSGDSDVDTAST 961
            RM   +    L+    +   + + +     S     +  +TP     +LS  +   T S+
Sbjct: 2430 RMG-QAPSQSLLPPAQDQPRSPVPSAFSDQSRCLIAQ--TTPVAGSQSLSSGAVATTTSS 2486

Query: 962  VSLRSGK-SGPSPTTPQPLRAQKEMSPSPPAAQDPGGTALVSAREQSSERQHHPLGPTDM 1020
                +G  S P+P  P    +     P+   AQ P   A   A + + ER+      +  
Sbjct: 2487 AGDHNGMLSVPAPGVPH---SDVGEPPASTGAQQPSALA---ALQPAKERRSSSSSSSSS 2540

Query: 1021 GRGEPVRRSAIRRGHRPRGSLDWPSEERGPVLAHLPSSDVMASNHETPEATGAGRLGSRR 1080
                    S+         S    S+  G  L   P   +      TP    A R G   
Sbjct: 2541 SSSSSSSSSSSSSSSSGSSS----SDSEGSSLPVQPEVALKRVPSPTPAPKEAVREGR-- 2594

Query: 1081 KPAAPPPSPAAREEQSRSSASSQKGPQALTRSNSLSTPRPTRASRLRRARLGDASDTEAA 1140
                P P+PA R+ +S SS+SS     + + S+S S+   + +S    +    +S +  +
Sbjct: 2595 ---PPEPTPAKRKRRSSSSSSSSSSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSPS 2650

Query: 1141 DGERGSLGNPEPVG---RPAAEQAKKLSRLDILAMPRKRAGSFTGTSDPEAAPARTSFSG 1197
              + G    P+P      P  E+  +  R  I ++   R+ S++       +P  +    
Sbjct: 2651 PAKPGPQALPKPASPKKPPPGERRSRSPRKPIDSLRDSRSLSYSPVERRRPSPQPSPRDQ 2710

Query: 1198 RSVELCCASRKPTMAEARAVSRKAANTATTTGP 1230
            +S      SR+    ++R+ S K      +  P
Sbjct: 2711 QSSSSERGSRRGQRGDSRSPSHKRRRETPSPRP 2743



 Score = 48.1 bits (113), Expect = 6e-05
 Identities = 95/439 (21%), Positives = 154/439 (35%), Gaps = 46/439 (10%)

Query: 849  RPGRSPEPDGPAP-AFLRQESFTKEPASGPPAPGKPPHISSHPLLQDLAATRAARMDFHS 907
            R  + P P+ P P + +R+ S ++ P    P   K           + ++ R  R     
Sbjct: 158  REAKQPAPEPPKPYSLVRESSSSRSPT---PKQKKKKKKKDRGRRSESSSPRRERKKSSK 214

Query: 908  QDTHLILKETETAL---AALEARLLSNSVDAECEGGSTPRPPEDALSGDSDVDTASTVSL 964
            +  H    E++         +++  S     +    +TP P        +  D+AS+   
Sbjct: 215  KKKHRSESESKKRKHRSPTPKSKRKSKDKKRKRSRSTTPAPKSRRAHRSTSADSASSSDT 274

Query: 965  RSGKSGPSPTTPQPLRAQKEMSPSPPAAQDPGGTALVSAREQSSERQHHPLGPTDMGRGE 1024
               +S  S        A    SPSP + +   G A  S  E  +     P  P       
Sbjct: 275  SRSRSR-SAAAKTHTTALAGRSPSPASGRRGEGDAPFS--EPGTTSTQRPSSP------- 324

Query: 1025 PVRRSAIRRGHRPRGSLDWPSEERGPVLAHLPSSDVMASNHETPEATG--AGRLGSRRKP 1082
                +A ++   P    D   +E+       PS +  ++  E P  T   A R G   +P
Sbjct: 325  ---ETATKQPSSPYEDKDKDKKEKSATRPS-PSPERSSTGPEPPAPTPLLAERHGGSPQP 380

Query: 1083 AAP---------PPSPAAREEQSRSSASSQKGPQALTRSNSLSTPRPTRASRLRRARLGD 1133
             A          PPS A+         S +K PQ+ +  +S  +P+PT+ SR   +    
Sbjct: 381  LATTPLSQEPVNPPSEASPTRDRSPPKSPEKLPQSSSSESSPPSPQPTKVSRHASSSPES 440

Query: 1134 ASDTEAADGERGSLGNPEPVGRP--AAEQAKKLSRLDILAMPRKR--AGSFTGTSDPEAA 1189
                 A    R    +P    R    A++ K  S      M R R  A +  G S     
Sbjct: 441  PKPAPAPGSHREISSSPTSKNRSHGRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTP 500

Query: 1190 PARTSFSGRSVELCCASRKPTMAEARAVSRKAANTATTTGPRQP-FSRARSGSARYTSTT 1248
              R     RS +     R+   A+    SR       +  P++P +SR+R+   R  S  
Sbjct: 501  TKRGHSRSRSPQW----RRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRS-- 554

Query: 1249 QTPRAGSSSRARSRAPGPR 1267
               R+    R+ SR+P  R
Sbjct: 555  ---RSARRGRSHSRSPATR 570



 Score = 44.7 bits (104), Expect = 7e-04
 Identities = 147/729 (20%), Positives = 237/729 (32%), Gaps = 121/729 (16%)

Query: 413  TPRKKRSQSFTHSPSGDPKADKRRGPTPADRDRPSVPAPVQAGGRSSGPQRAGSLKREKT 472
            T R    ++ T  PS  P  DK +        RPS P+P ++   S+GP+          
Sbjct: 318  TQRPSSPETATKQPSS-PYEDKDKDKKEKSATRPS-PSPERS---STGPEPPAPTPL-LA 371

Query: 473  EERLGSPSPASRTPARPFGSVGRRSRLAQDFMAQCLRESSPAARPSPEKVPPVLPAPLTP 532
            E   GSP P + TP                 ++Q        A P+ ++ PP  P  L  
Sbjct: 372  ERHGGSPQPLATTP-----------------LSQEPVNPPSEASPTRDRSPPKSPEKLPQ 414

Query: 533  HGTSPVGPPTPPPAPTDPQLTKARKQEEDDSLSDAGTYTIETEAQDTEVEEARKMIDQVF 592
              +S   PP+P P       + +   E        G++                      
Sbjct: 415  SSSSESSPPSPQPTKVSRHASSS--PESPKPAPAPGSHR--------------------- 451

Query: 593  GVLESPELSRASSATFRPVIRGDRDESDDGGVAQRMALLQEFASRPLGAA-----PQAEH 647
                  E+S + ++  R   R  RD+S     ++RM   +  A+   G +      +  H
Sbjct: 452  ------EISSSPTSKNRSHGRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPTKRGH 505

Query: 648  QGLPVP---GSPGGQKW----VSRWASLADSYSDPGLTEDGLGRRGGEPEGSLPVRMRRR 700
                 P    S   Q+W      +    + S   PG +     +R G    +   R   R
Sbjct: 506  SRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSR 565

Query: 701  LPQLPS-ERADSPAGPESSRRSGPGPPELDSEQPSRLFGQEELDPDSLSDASGSDGGRGP 759
             P      R+ +PA    SR   P      S  P+R   +           + +  GR  
Sbjct: 566  SPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSR---------TPARRGRSR 616

Query: 760  EPGVEPQDSRRRSPQEGPTWSR--GRRSPRAPGEPTPASFFIGDQNGDAVLSRKPLAAPG 817
                  + SR RSP    + SR   RRS R+    TPA          A   R     P 
Sbjct: 617  SRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSR-TPARRGRSRSRTPARRGRSRSRTPA 675

Query: 818  DGEGLGQTAQPSPPARDGVYVSANGRMVIQ--LRPGRSPEPDGPAPAFLRQESFTKEPAS 875
               G  ++  P+   R        GR   +  +R GRS              +  +   S
Sbjct: 676  RRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRS-----------HSRTPQRRGRS 724

Query: 876  GPPAPGKPPHISSHPLLQDLAATRAARMDFHSQDTHLILKETETALAALEARLLSNSVDA 935
            G  +  K    +S    +  ++    +    S+ +  +      A + L  R  S S  +
Sbjct: 725  GSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSKAKSRLSLR-RSLSGSS 783

Query: 936  ECEGGSTPRPPEDALSGDSDVDTASTVSLRSGKSGPSPTTPQPLRAQKEMSPSPPAAQDP 995
             C    +  PP  + SG S     S    R  +S  SP        QK  +PS       
Sbjct: 784  PCPKQKSQTPPRRSRSGSSQPKAKSRTPPRRSRSSSSPPP-----KQKSKTPS------- 831

Query: 996  GGTALVSAREQSSERQHHPLGPTDMGRGEPVRRSAIRRGHRPRGSLDWPSEERGPVLAHL 1055
                    R+  S    HP     +  G P R+ +I     P+ +    + +R       
Sbjct: 832  --------RQSHSSSSPHP----KVKSGTPPRQGSIT---SPQANEQSVTPQRRSCFESS 876

Query: 1056 PSSDVMASNHETPEATGAGRLGSRRKPAAPPPSPAAREEQSRSSASSQKGPQALTRSNSL 1115
            P  ++ +        +G+     R K + PP    +R    +    +   P+  + S S 
Sbjct: 877  PDPELKSRTPSRHSCSGSS--PPRVKSSTPPRQSPSRSSSPQPKVKAIISPRQRSHSGS- 933

Query: 1116 STPRPTRAS 1124
            S+P P+R +
Sbjct: 934  SSPSPSRVT 942



 Score = 43.1 bits (100), Expect = 0.002
 Identities = 99/448 (22%), Positives = 141/448 (31%), Gaps = 93/448 (20%)

Query: 684  RRGGEPEGSLPVRMRRRLPQLPSERADSPAGPESSRRSGPGPPELDSEQPSRLFGQEELD 743
            R  G     L  R R R P         P+ P  SR +    P      PS   GQ    
Sbjct: 2392 RVSGRTSPPLLDRARSRTP---------PSAPSQSRMTSERAPS-----PSSRMGQA--- 2434

Query: 744  PDSLSDASGSDGGRGPEPGVEPQDSRRRSPQEGPTWSRGRRSPRAPGEPTPASFFIGDQN 803
            P         D  R P P      SR    Q  P       S  A    T ++   GD N
Sbjct: 2435 PSQSLLPPAQDQPRSPVPSAFSDQSRCLIAQTTPVAGSQSLSSGAVATTTSSA---GDHN 2491

Query: 804  GDAVLSRKPLAAPGDGEGLGQTAQPSPPARDGVYVSANGRMVIQLRPGRSPEPDGPAPAF 863
            G        L+ P  G       +P  PA  G    +    +   +  RS      + + 
Sbjct: 2492 G-------MLSVPAPGVPHSDVGEP--PASTGAQQPSALAALQPAKERRSSSSSSSSSSS 2542

Query: 864  LRQESFTKEPASGPPAPGKPPHISSHPLLQDLAATRAARMDFHSQDTHLILKETETALAA 923
                S +   +S   +       SS P+  ++A  R        ++     +  E   A 
Sbjct: 2543 SSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPKEAVREGRPPEPTPAK 2602

Query: 924  LEARLLSNSVDAECEGGSTPRPPEDALSGDSDVDTASTVSLRSGKSGPSPTTPQPLRAQK 983
             + R  S+S  +     S+      + S  S   ++S+ S  S  S PSP  P P    K
Sbjct: 2603 RKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-SSSSSSPSPAKPGPQALPK 2661

Query: 984  EMSPSPPAAQDPGGTALVSAREQSSERQHHPLGPTDMGRGEPVRRSAIRRGHRPRGSLDW 1043
              SP  P    PG                                   RR   PR  +D 
Sbjct: 2662 PASPKKP---PPGE----------------------------------RRSRSPRKPIDS 2684

Query: 1044 PSEERGPVLAHLPSSDVMASNHETPEATGAGRLGSRRKPAAPPPSPAAREEQSRSS-ASS 1102
              + R   L++ P                      RR+P+   P P+ R++QS SS   S
Sbjct: 2685 LRDSRS--LSYSPV--------------------ERRRPS---PQPSPRDQQSSSSERGS 2719

Query: 1103 QKGPQALTRSNSLSTPRPTRASRLRRAR 1130
            ++G +  +RS S    R T + R  R R
Sbjct: 2720 RRGQRGDSRSPSHKRRRETPSPRPMRHR 2747



 Score = 42.7 bits (99), Expect = 0.003
 Identities = 69/316 (21%), Positives = 120/316 (37%), Gaps = 31/316 (9%)

Query: 1075 RLGSRRKPAAPPPSPAAREEQSRSSAS------SQKGPQALTRSNSLSTPRPTRASRLRR 1128
            R    ++PA  PP P +   +S SS S       +K  +   R +  S+PR  R    ++
Sbjct: 156  RAREAKQPAPEPPKPYSLVRESSSSRSPTPKQKKKKKKKDRGRRSESSSPRRERKKSSKK 215

Query: 1129 ARLGDASDTEAADGERGSLGNPEPVG-RPAAEQAKKLSRLDILAMPRKRAGSFT-----G 1182
             +    S++E+   +  S   P P   R + ++ +K SR    A   +RA   T      
Sbjct: 216  KK--HRSESESKKRKHRS---PTPKSKRKSKDKKRKRSRSTTPAPKSRRAHRSTSADSAS 270

Query: 1183 TSDPEAAPARTSFSGRSVELCCASRKPTMAEARAVSRKA----ANTATTTGPRQPFSRAR 1238
            +SD   + +R S + ++     A R P+ A  R     A      T +T  P  P +  +
Sbjct: 271  SSDTSRSRSR-SAAAKTHTTALAGRSPSPASGRRGEGDAPFSEPGTTSTQRPSSPETATK 329

Query: 1239 SGSARYTSTTQTPRAGSSSRARSRAPGPRDTDDDEEEPDPYGFIVQTAEIAEIARLSQTL 1298
              S+ Y    +  +  S++R    +P P  +    E P P      T  +AE    S   
Sbjct: 330  QPSSPYEDKDKDKKEKSATRP---SPSPERSSTGPEPPAP------TPLLAERHGGSPQP 380

Query: 1299 VKDVAILAQEIHDVAGDGDTLGSSEPAHSASLSNMPSTPASTISAREELVQRIPEASLNF 1358
            +    +  + ++  +    T   S P     L    S+ +S  S +   V R   +S   
Sbjct: 381  LATTPLSQEPVNPPSEASPTRDRSPPKSPEKLPQSSSSESSPPSPQPTKVSRHASSSPES 440

Query: 1359 QKVPPGSLNSRDFDQN 1374
             K  P   + R+   +
Sbjct: 441  PKPAPAPGSHREISSS 456



 Score = 32.0 bits (71), Expect = 4.8
 Identities = 56/270 (20%), Positives = 86/270 (31%), Gaps = 67/270 (24%)

Query: 323  PSLLHRVGPGDDRHSTKSDLPVHTRTLKGHKHEDGTQSDSEDPLAKAASAAGVPLEASGE 382
            PS L  + P  +R S+ S                 + S S    + ++ ++    E S  
Sbjct: 2518 PSALAALQPAKERRSSSSS---------SSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSL 2568

Query: 383  QVRLQRQIKRDPQELLHNQQAFVIEFFDEDTPRKKRSQSFTHSPSGDPKADKRRGPTPAD 442
             V+ +  +KR P                  TP  K +      P   P   KRR  + + 
Sbjct: 2569 PVQPEVALKRVPSP----------------TPAPKEAVREGRPPEPTPAKRKRRSSSSSS 2612

Query: 443  RDRPSVPAPVQAGGRSSGPQRAGSLKREKTEERLGSPSPASRTPARPFGSVGRRSRLAQD 502
                S  +   +   SS    + S     +     SPSPA   P                
Sbjct: 2613 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGP---------------- 2656

Query: 503  FMAQCLRESSPAARPSPEKVPPVLPAPLTPH------------GTSPV--GPPTPPPAPT 548
               Q L + +     SP+K PP      +P               SPV    P+P P+P 
Sbjct: 2657 ---QALPKPA-----SPKKPPPGERRSRSPRKPIDSLRDSRSLSYSPVERRRPSPQPSPR 2708

Query: 549  DPQLTK----ARKQEEDDSLSDAGTYTIET 574
            D Q +     +R+ +  DS S +     ET
Sbjct: 2709 DQQSSSSERGSRRGQRGDSRSPSHKRRRET 2738


>gi|56676397 ankyrin repeat domain 11 [Homo sapiens]
          Length = 2663

 Score = 67.8 bits (164), Expect = 8e-11
 Identities = 203/909 (22%), Positives = 292/909 (32%), Gaps = 173/909 (19%)

Query: 353  KHEDGTQSDSEDPLAKAASAAGV-PLEASGEQVRLQRQ--------IKRDPQELLHNQQA 403
            K +DG + +  DP+  +     V P +  G++    R+        +    + +L  +  
Sbjct: 1533 KFKDGAEKEKGDPVKMSNGNDKVAPSKDPGKKDARPREKLLGDGDLMMTSFERMLSQKDL 1592

Query: 404  FVIEFFDEDTPRKKRSQSFTHSPSGDPKADKRRGPTPADRDRP-SVPAPVQAGGRSSGPQ 462
             + E       R K+ +   H  SGDPK  ++  P    R +   +PA          P 
Sbjct: 1593 EIEERHKRHKERMKQMEKLRHR-SGDPKLKEKAKPADDGRKKGLDIPA-------KKPPG 1644

Query: 463  RAGSLKREKTEERLGSPSPASRTPARPFGSVGRRSRLAQDFMAQCLRESSPAARPSPEKV 522
                 K +K +E    P PA+     P      +  LA   M +                
Sbjct: 1645 LDPPFKDKKLKESTPIP-PAAENKLHPASGADSKDWLAGPHMKE---------------- 1687

Query: 523  PPVLPAPLTPHGTSPVGPPTPPPAPT---------DPQLTKARKQEEDDSLSDAGTYTIE 573
              VLPA   P  + P G PTP    +          P+       +  D + D       
Sbjct: 1688 --VLPASPRPDQSRPTGVPTPTSVLSCPSYEEVMHTPRTPSCSADDYADLVFDCADSQHS 1745

Query: 574  TEAQDTEVEEARKMIDQVFGVLESPELSRASSATFRP------------VIRGDRDESDD 621
            T                 F V  S     AS A  RP            + R   +E   
Sbjct: 1746 TPVPTAPTSACSPSFFDRFSVASSGLSENASQAPARPLSTNLYRSVSVDIRRTPEEEFSV 1805

Query: 622  GGVAQRMALLQEFASRPLGAAPQAEHQGLPVPGSPGGQKWVSRWASLADSYSDP--GLTE 679
            G    R   +   +S      P  E +  P+P  P       ++A L+  Y  P  GL  
Sbjct: 1806 GDKLFRQQSVPAASSYDSPMPPSMEDRA-PLPPVP-----AEKFACLSPGYYSPDYGLPS 1859

Query: 680  DGLGRRGGEPEGSLPVRMRRRLPQLPSERADSPAGPESSRRSGPGP-PELDSEQPSRLFG 738
              +      P   + V               SP G  SS ++ P P P  +   PS L G
Sbjct: 1860 PKVDALHCPPAAVVTV-------------TPSPEGVFSSLQAKPSPSPRAELLVPS-LEG 1905

Query: 739  QEELDPDSLSDASGSDGGRGPEPG-VEPQDSRRRSPQEGPTWSRGRRSP---RAPGEPTP 794
                D D+  D   +     PEP  +EP D       EGP  +     P     P E   
Sbjct: 1906 ALPPDLDTSEDQQATAAIIPPEPSYLEPLD-------EGPFSAVITEEPVEWAHPSEQAL 1958

Query: 795  ASFFIGDQNGDAVLSRKPLAAPGDGEGLGQTAQ--PSPPAR----DGVYVSANGRMVIQL 848
            AS  IG        S  P++ P   + L ++ Q  P  P R    D ++ +A G      
Sbjct: 1959 ASSLIGG------TSENPVSWPVGSDLLLKSPQRFPESPKRFCPADPLHSAAPGPFSASE 2012

Query: 849  RPGRSPEPDGPAPAFLR---------QESFTKEPA---SGPPAPGKPPHISSHPLLQDLA 896
             P  +P P  PAP  L          ++     PA   +   AP  PP         +  
Sbjct: 2013 APYPAP-PASPAPYALPVAEPGLEDVKDGVDAVPAAISTSEAAPYAPPS-GLESFFSNCK 2070

Query: 897  ATRAARMDFHSQDTHLILKETETALAALEARLLSNSVDAECEGGSTPRPPEDALSGDSDV 956
            +   A +D   +   +       AL  LE   L  S      G   P P  DA +G  D 
Sbjct: 2071 SLPEAPLDVAPEPACVAAVAQVEALGPLENSFLDGSRGLSHLGQVEPVPWADAFAGPEDD 2130

Query: 957  DTASTVSL-------RSGKSGPSPTTPQPLRAQKEMSPSPPAAQDPGGTALVSARE---- 1005
                  SL       +    G +    + L   +EM P  P   + G  + V A E    
Sbjct: 2131 LDLGPFSLPELPLQTKDAADGEAEPVEESLAPPEEMPPGAPGVINGGDVSTVVAEEPPAL 2190

Query: 1006 ---QSSER-----QHHPLG-----------------PTDMGRGEP---VRRSAIRRGHRP 1037
               Q+S R     +  P G                 P +  RG+P   V  + +    RP
Sbjct: 2191 PPDQASTRLPAELEPEPSGEPKLDVALEAAVEAETVPEERARGDPDSSVEPAPVPPEQRP 2250

Query: 1038 RGSLDWPSEERGPVLAHLPSSDVMASN--HETPEATGAG-----RLGSRRKPAAPPPSPA 1090
             GS D  +E  GP  A L + D  A N   +   A GAG            PA  PP   
Sbjct: 2251 LGSGDQGAEAEGPPAASLCAPDGPAPNTVAQAQAADGAGPEDDTEASRAAAPAEGPPGGI 2310

Query: 1091 ARE-EQSRSSASSQKGPQALTRSNSLSTPRPTRASRLRRARLGDASDTEAADGERGSLGN 1149
              E  + + +A + K P+            P R +R R   L + S       E+     
Sbjct: 2311 QPEAAEPKPTAEAPKAPRV--------EEIPQRMTRNRAQMLANQSKQGPPPSEKECAPT 2362

Query: 1150 PEPVGRPAA 1158
            P PV R  A
Sbjct: 2363 PAPVTRAKA 2371


>gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f
            [Homo sapiens]
          Length = 1412

 Score = 65.1 bits (157), Expect = 5e-10
 Identities = 128/546 (23%), Positives = 189/546 (34%), Gaps = 130/546 (23%)

Query: 815  APGDGEGLGQTAQPSPPARDGVYVSANGRMVIQLRPGRSPEPDGPAPAFLRQESFTKEPA 874
            A  + E  G+T    P         A G+ V  L  G+SP       A     S T+E  
Sbjct: 125  AKAETEKAGKTGNSMPHP-------ATGKTVANLLSGKSPRKSAEPSANTTLVSETEEEG 177

Query: 875  SGPP--APGKPPHISSHPLLQDLAATRAARMDFHSQDTHLILKETETALAALEARLLSNS 932
            S P   A  KP  +S            A + D  S+DT     ET+  + A E  L   +
Sbjct: 178  SVPAFGAAAKPGMVS------------AGQADSSSEDTSSSSDETDVEVKASEKILQVRA 225

Query: 933  VDAECEG----GSTPRPPEDA---------------------LSGDSDVDTASTVSL--- 964
              A  +G    G+TP PP  A                      S DS+ +T +  +L   
Sbjct: 226  ASAPAKGTPGKGATPAPPGKAGAVASQTKAGKPEEDSESSSEESSDSEEETPAAKALLQA 285

Query: 965  -RSGKSGP--SPTTPQPLRAQKEMSPSPPAAQDPGGTAL---------VSAREQSSERQH 1012
              SGK+    + + P     +K  +P+PP    P               S+ E+S   + 
Sbjct: 286  KASGKTSQVGAASAPAKESPRKGAAPAPPGKTGPAVAKAQAGKREEDSQSSSEESDSEEE 345

Query: 1013 HPLGPTDMGRGEPVRRSAIRRGHRPR-GSLDWPSEERGPVLAHL----PSSDVMASNHET 1067
             P      G+   VR ++      PR G+   P  + GP  A +       D  +S+ E+
Sbjct: 346  APAQAKPSGKAPQVRAASAPAKESPRKGAAPAPPRKTGPAAAQVQVGKQEEDSRSSSEES 405

Query: 1068 -------------------------PEAT-GAGRLGSRRKPAAP----PPSPAAR----E 1093
                                     P +T G G LG    P  P    P +P+A+    E
Sbjct: 406  DSDREALAAMNAAQVKPLGKSPQVKPASTMGMGPLGKGAGPVPPGKVGPATPSAQVGKWE 465

Query: 1094 EQSRSSASSQKGPQALTRSNSLSTPRPTRASRLRRARLGDASDTEAADGERGSLGNPEPV 1153
            E S SS+           S+S     PT  +  +   LG+    +A      + G P+  
Sbjct: 466  EDSESSSEES--------SDSSDGEVPTAVAPAQEKSLGNI--LQAKPTSSPAKGPPQKA 515

Query: 1154 GRPAAEQAKKLSRLDILAMPRKRAGSFTGTSDPEAAPARTSFSGRSVELCCASRKPTM-- 1211
            G P A Q K    +D      + + S    +D E APA          +  A  KP +  
Sbjct: 516  G-PVAVQVKAEKPMDNSESSEESSDS----ADSEEAPA---------AMTAAQAKPALKI 561

Query: 1212 AEARAVSRKAANTATTTGPRQPFSRARSGSARYTSTTQTPRAGSSSRARSRAPGPRDTDD 1271
             + +A  +K   T TT   +    R  + + R   T  +P AGSS         P +   
Sbjct: 562  PQTKACPKK---TNTTASAKVAPVRVGTQAPRKAGTATSP-AGSSPAVAGGTQRPAEDSS 617

Query: 1272 DEEEPD 1277
              EE D
Sbjct: 618  SSEESD 623



 Score = 65.1 bits (157), Expect = 5e-10
 Identities = 175/876 (19%), Positives = 293/876 (33%), Gaps = 124/876 (14%)

Query: 353  KHEDGTQSDSEDPLAKAASAAGVPLEASGEQVRL-QRQIKRDPQELLHNQQAFVIEFFDE 411
            K E+ +QS SE+  ++  + A         QVR      K  P++               
Sbjct: 328  KREEDSQSSSEESDSEEEAPAQAKPSGKAPQVRAASAPAKESPRKGA------------A 375

Query: 412  DTPRKKRSQSFTHSPSGDPKADKRRGPTPADRDRPSVPA----PVQAGGRSSGPQRAGSL 467
              P +K   +      G  + D R     +D DR ++ A     V+  G+S   + A ++
Sbjct: 376  PAPPRKTGPAAAQVQVGKQEEDSRSSSEESDSDREALAAMNAAQVKPLGKSPQVKPASTM 435

Query: 468  KREKTEERLGSPSPASRTPARPFGSVGRRSRLAQDFMAQCLRESS----PAARPSPEKV- 522
                  +  G   P    PA P   VG+    ++    +    S      A  P+ EK  
Sbjct: 436  GMGPLGKGAGPVPPGKVGPATPSAQVGKWEEDSESSSEESSDSSDGEVPTAVAPAQEKSL 495

Query: 523  -------PPVLPAPLTPHGTSPVGPPTPPPAPTDPQLTKARKQEEDDSLSDAGTYTI--- 572
                   P   PA   P    PV        P D   +     +  DS       T    
Sbjct: 496  GNILQAKPTSSPAKGPPQKAGPVAVQVKAEKPMDNSESSEESSDSADSEEAPAAMTAAQA 555

Query: 573  -------ETEA--QDTEVEEARKMIDQVFGVLESPELSRASS----------ATFRPVIR 613
                   +T+A  + T    + K+     G     +   A+S           T RP   
Sbjct: 556  KPALKIPQTKACPKKTNTTASAKVAPVRVGTQAPRKAGTATSPAGSSPAVAGGTQRPAED 615

Query: 614  GDRDESDDGGVAQRMALLQEFASRPLGAAPQAEHQGLPVPGSPG--------GQKWVSRW 665
                E  D    +    +    ++ +G   Q +   +PV GS G        G+   +  
Sbjct: 616  SSSSEESDSEEEKTGLAVTVGQAKSVGKGLQVKAASVPVKGSLGQGTAPVLPGKTGPTVT 675

Query: 666  ASLADSYSDPGLTEDGLGRRGGEPEGSLPVRMRRRLPQLPSERADSPAGPESSRR--SGP 723
               A+   D   +E+       E   + P +++  + +  ++   + A   S++   S P
Sbjct: 676  QVKAEKQEDSESSEE---ESDSEEAAASPAQVKTSVKKTQAKANPAAARAPSAKGTISAP 732

Query: 724  GPPELDSEQPSRLFGQEELDPDSLSDASGSDGGRGPE--PGVEPQDSRRRSPQEGPTWSR 781
            G     + Q  +     ++ P   +  + +   RGP   P V    +     Q GP    
Sbjct: 733  GKVVTAAAQAKQR-SPSKVKPPVRNPQNSTVLARGPASVPSVGKAVATAAQAQTGPEEDS 791

Query: 782  GRRSPRAPGEPTPASFFIGDQNGDAVLSRKPLAAPGDGEGLGQTAQPSPPARDGVYVSAN 841
            G     +  E    +      +G     R  LA   +    G  A P+PP + G   +  
Sbjct: 792  GSSEEESDSEEEAETLAQVKPSGKTHQIRAALAPAKESPRKG--AAPTPPGKTGPSAAQA 849

Query: 842  GRMVIQLRPGRSPEPDGPAPAFLRQESFTKEPASGPPAPGKPPHISSHPLLQDLAAT-RA 900
            G+           + DG APA +      K P         P   ++ P     A+T R 
Sbjct: 850  GKQDDSGSSSEESDSDGEAPAAVTSAQVIKPPLIFVDPNRSPAGPAATPAQAQAASTPRK 909

Query: 901  ARMDFHSQDTHLILKETETALAALEARLLSNSVDAECEGGSTPR-PPEDALSGDSDVDTA 959
            AR    +  +     E E  + A +        +      + PR  P+ +++G S    +
Sbjct: 910  ARASESTARSSSSESEDEDVIPATQCLTPGIRTNVVTMPTAHPRIAPKASMAGASSSKES 969

Query: 960  STVSLRSGKSGPSPTTPQPLRAQKEMSPSPPAAQDPGGTALVSAREQSSERQHHPLGPTD 1019
            S +S   GK    P T        ++S   PA+      AL    +++SE Q        
Sbjct: 970  SRIS--DGKKQEGPAT--------QVSKKNPASLPLTQAALKVLAQKASEAQ-------- 1011

Query: 1020 MGRGEPVRRSAIRRGHRPRGSLDWPSEERGPVLAHLPSSDVMASNHETPEATGAGRLGSR 1079
                 PV R+              PS      +  LP++   ++   + +A G  +L   
Sbjct: 1012 ----PPVARTQ-------------PSSGVDSAVGTLPATSPQST---SVQAKGTNKL--- 1048

Query: 1080 RKPAAP--------PPSPAAREEQSRSSASSQ---KGPQALTRSNSLSTPRPTRASRLRR 1128
            RKP  P        P S    E+ S SS+ S+   +GPQ    +++L  P P+R   L  
Sbjct: 1049 RKPKLPEVQQATKAPESSDDSEDSSDSSSGSEEDGEGPQGAKSAHTLVGPTPSRTETLVE 1108

Query: 1129 ARLGDASDTEAADGERGSL-GNPEPVGRPAAEQAKK 1163
                ++S+ +     +  L G   P   PA  QA K
Sbjct: 1109 ETAAESSEDDVVAPSQSLLSGYMTPGLTPANSQASK 1144



 Score = 59.7 bits (143), Expect = 2e-08
 Identities = 209/1025 (20%), Positives = 350/1025 (34%), Gaps = 221/1025 (21%)

Query: 410  DEDTPRKKR--------SQSFTHSPSGDPKADKRRG--PTPADRDRPSVPAPVQAGGRSS 459
            +E+TP  K           S   + S   K   R+G  P P  +  P+V A  QAG R  
Sbjct: 273  EEETPAAKALLQAKASGKTSQVGAASAPAKESPRKGAAPAPPGKTGPAV-AKAQAGKREE 331

Query: 460  GPQRAGSLKREKTEERLGSPSPASRTPARPFGSVGRRSRLAQDFMAQCLRESSPAARPSP 519
              Q + S + +  EE      P+ + P                     +R +S  A+ SP
Sbjct: 332  DSQ-SSSEESDSEEEAPAQAKPSGKAPQ--------------------VRAASAPAKESP 370

Query: 520  EKVPPVLPAPLTPHGTSPVGPPTPPPAPTDPQLTKARKQEEDDSLSDAGTYTIETEAQDT 579
             K            G +P  P    PA    Q+    KQEED   S        +E  D+
Sbjct: 371  RK------------GAAPAPPRKTGPAAAQVQV---GKQEEDSRSS--------SEESDS 407

Query: 580  EVEEARKM-IDQVFGVLESPELSRASSATFRPVIRGDRDESDDGGVAQRMALLQEFASRP 638
            + E    M   QV  + +SP++  AS+    P+ +G                        
Sbjct: 408  DREALAAMNAAQVKPLGKSPQVKPASTMGMGPLGKG------------------------ 443

Query: 639  LGAAPQAEHQGLPVPGSPGGQKWVSRWASLADSYSDPGLTEDGLGRRGGEPEGSLPVRMR 698
             G  P     G   P +P  Q  V +W   ++S S+    E      G  P    P + +
Sbjct: 444  AGPVP----PGKVGPATPSAQ--VGKWEEDSESSSE----ESSDSSDGEVPTAVAPAQEK 493

Query: 699  RRLPQLPSERADSPA-GPESSRRSGPGPPELDSEQP---------SRLFGQEELDPDSLS 748
                 L ++   SPA GP   +++GP   ++ +E+P         S      E  P +++
Sbjct: 494  SLGNILQAKPTSSPAKGP--PQKAGPVAVQVKAEKPMDNSESSEESSDSADSEEAPAAMT 551

Query: 749  DASGSDGGRGPEPGVEPQDSRRRSPQEGPTWSRGRRSPRAPGEPT--------------- 793
             A      + P+    P+ +   +  +      G ++PR  G  T               
Sbjct: 552  AAQAKPALKIPQTKACPKKTNTTASAKVAPVRVGTQAPRKAGTATSPAGSSPAVAGGTQR 611

Query: 794  PASFFIGDQNGDAVLSRKPLA-----APGDGEGLGQTAQPSPPARDGVYVSANGRMVIQL 848
            PA      +  D+   +  LA     A   G+GL Q    S P +  +     G+    +
Sbjct: 612  PAEDSSSSEESDSEEEKTGLAVTVGQAKSVGKGL-QVKAASVPVKGSL-----GQGTAPV 665

Query: 849  RPGRSPEPDGPAPAFLRQES-FTKEPASGPPAPGKPPHISSHPLLQDLAATRAARMDFHS 907
             PG++        A  +++S  ++E +    A   P  + +        A  AA     +
Sbjct: 666  LPGKTGPTVTQVKAEKQEDSESSEEESDSEEAAASPAQVKTSVKKTQAKANPAAARAPSA 725

Query: 908  QDTHLILKETETALAALEARLLSNSVDAECEGGSTPRPPEDALSGDSDVDTASTVSLRSG 967
            + T            +   ++++ +  A+    S  +PP             STV  R  
Sbjct: 726  KGT-----------ISAPGKVVTAAAQAKQRSPSKVKPPVRNPQN-------STVLARGP 767

Query: 968  KSGPSPTTPQPLRAQKEMSPSPPAAQDPGGTALVSAREQSSERQHHPLGPT-DMGRGEPV 1026
             S PS        AQ +  P     +D G     S  E  SE +   L      G+   +
Sbjct: 768  ASVPSVGKAVATAAQAQTGPE----EDSGS----SEEESDSEEEAETLAQVKPSGKTHQI 819

Query: 1027 RRSAIRRGHRPR-GSLDWPSEERGPVLAHLPSSDVMASNHETPEATGAGRLGSRRKPAAP 1085
            R +       PR G+   P  + GP  A     D   S+ E  ++ G             
Sbjct: 820  RAALAPAKESPRKGAAPTPPGKTGPSAAQAGKQDDSGSSSEESDSDGEAPAAVTSAQVIK 879

Query: 1086 PPSPAAREEQSRSSASSQKGPQALTRSNSLSTPRPTRASR-LRRARLGDASDTEAADGER 1144
            P  P    + +RS A     P    ++ + STPR  RAS    R+   ++ D +      
Sbjct: 880  P--PLIFVDPNRSPAGPAATP---AQAQAASTPRKARASESTARSSSSESEDEDVI---- 930

Query: 1145 GSLGNPEPVGRPAAEQAKKLSRLDILAMPRKR-----AGSFTGTSDPEAAPARTSFSGRS 1199
                       PA +      R +++ MP          S  G S  + +   +    + 
Sbjct: 931  -----------PATQCLTPGIRTNVVTMPTAHPRIAPKASMAGASSSKESSRISDGKKQE 979

Query: 1200 VELCCASRKP------TMAEARAVSRKAANTATTTGPRQPFSRARS--GSARYTS--TTQ 1249
                  S+K       T A  + +++KA+         QP S   S  G+   TS  +T 
Sbjct: 980  GPATQVSKKNPASLPLTQAALKVLAQKASEAQPPVARTQPSSGVDSAVGTLPATSPQSTS 1039

Query: 1250 TPRAGSSSRARSRAP-------GPRDTDDDEEEPDPYGFIVQTAEIAEIARLSQTLV--- 1299
                G++   + + P        P  +DD E+  D      +  E  + A+ + TLV   
Sbjct: 1040 VQAKGTNKLRKPKLPEVQQATKAPESSDDSEDSSDSSSGSEEDGEGPQGAKSAHTLVGPT 1099

Query: 1300 -KDVAILAQEIHDVAGDGDTLGSSE------------PAHSASLSNMP---STP--ASTI 1341
                  L +E    + + D +  S+            PA+S +    P   S+P  +ST+
Sbjct: 1100 PSRTETLVEETAAESSEDDVVAPSQSLLSGYMTPGLTPANSQASKATPKLDSSPSVSSTL 1159

Query: 1342 SAREE 1346
            +A+++
Sbjct: 1160 AAKDD 1164


>gi|57164975 Treacher Collins-Franceschetti syndrome 1 isoform b [Homo
            sapiens]
          Length = 1411

 Score = 65.1 bits (157), Expect = 5e-10
 Identities = 128/546 (23%), Positives = 189/546 (34%), Gaps = 130/546 (23%)

Query: 815  APGDGEGLGQTAQPSPPARDGVYVSANGRMVIQLRPGRSPEPDGPAPAFLRQESFTKEPA 874
            A  + E  G+T    P         A G+ V  L  G+SP       A     S T+E  
Sbjct: 125  AKAETEKAGKTGNSMPHP-------ATGKTVANLLSGKSPRKSAEPSANTTLVSETEEEG 177

Query: 875  SGPP--APGKPPHISSHPLLQDLAATRAARMDFHSQDTHLILKETETALAALEARLLSNS 932
            S P   A  KP  +S            A + D  S+DT     ET+  + A E  L   +
Sbjct: 178  SVPAFGAAAKPGMVS------------AGQADSSSEDTSSSSDETDVEVKASEKILQVRA 225

Query: 933  VDAECEG----GSTPRPPEDA---------------------LSGDSDVDTASTVSL--- 964
              A  +G    G+TP PP  A                      S DS+ +T +  +L   
Sbjct: 226  ASAPAKGTPGKGATPAPPGKAGAVASQTKAGKPEEDSESSSEESSDSEEETPAAKALLQA 285

Query: 965  -RSGKSGP--SPTTPQPLRAQKEMSPSPPAAQDPGGTAL---------VSAREQSSERQH 1012
              SGK+    + + P     +K  +P+PP    P               S+ E+S   + 
Sbjct: 286  KASGKTSQVGAASAPAKESPRKGAAPAPPGKTGPAVAKAQAGKREEDSQSSSEESDSEEE 345

Query: 1013 HPLGPTDMGRGEPVRRSAIRRGHRPR-GSLDWPSEERGPVLAHL----PSSDVMASNHET 1067
             P      G+   VR ++      PR G+   P  + GP  A +       D  +S+ E+
Sbjct: 346  APAQAKPSGKAPQVRAASAPAKESPRKGAAPAPPRKTGPAAAQVQVGKQEEDSRSSSEES 405

Query: 1068 -------------------------PEAT-GAGRLGSRRKPAAP----PPSPAAR----E 1093
                                     P +T G G LG    P  P    P +P+A+    E
Sbjct: 406  DSDREALAAMNAAQVKPLGKSPQVKPASTMGMGPLGKGAGPVPPGKVGPATPSAQVGKWE 465

Query: 1094 EQSRSSASSQKGPQALTRSNSLSTPRPTRASRLRRARLGDASDTEAADGERGSLGNPEPV 1153
            E S SS+           S+S     PT  +  +   LG+    +A      + G P+  
Sbjct: 466  EDSESSSEES--------SDSSDGEVPTAVAPAQEKSLGNI--LQAKPTSSPAKGPPQKA 515

Query: 1154 GRPAAEQAKKLSRLDILAMPRKRAGSFTGTSDPEAAPARTSFSGRSVELCCASRKPTM-- 1211
            G P A Q K    +D      + + S    +D E APA          +  A  KP +  
Sbjct: 516  G-PVAVQVKAEKPMDNSESSEESSDS----ADSEEAPA---------AMTAAQAKPALKI 561

Query: 1212 AEARAVSRKAANTATTTGPRQPFSRARSGSARYTSTTQTPRAGSSSRARSRAPGPRDTDD 1271
             + +A  +K   T TT   +    R  + + R   T  +P AGSS         P +   
Sbjct: 562  PQTKACPKK---TNTTASAKVAPVRVGTQAPRKAGTATSP-AGSSPAVAGGTQRPAEDSS 617

Query: 1272 DEEEPD 1277
              EE D
Sbjct: 618  SSEESD 623



 Score = 62.0 bits (149), Expect = 4e-09
 Identities = 175/876 (19%), Positives = 293/876 (33%), Gaps = 125/876 (14%)

Query: 353  KHEDGTQSDSEDPLAKAASAAGVPLEASGEQVRL-QRQIKRDPQELLHNQQAFVIEFFDE 411
            K E+ +QS SE+  ++  + A         QVR      K  P++               
Sbjct: 328  KREEDSQSSSEESDSEEEAPAQAKPSGKAPQVRAASAPAKESPRKGA------------A 375

Query: 412  DTPRKKRSQSFTHSPSGDPKADKRRGPTPADRDRPSVPA----PVQAGGRSSGPQRAGSL 467
              P +K   +      G  + D R     +D DR ++ A     V+  G+S   + A ++
Sbjct: 376  PAPPRKTGPAAAQVQVGKQEEDSRSSSEESDSDREALAAMNAAQVKPLGKSPQVKPASTM 435

Query: 468  KREKTEERLGSPSPASRTPARPFGSVGRRSRLAQDFMAQCLRESS----PAARPSPEKV- 522
                  +  G   P    PA P   VG+    ++    +    S      A  P+ EK  
Sbjct: 436  GMGPLGKGAGPVPPGKVGPATPSAQVGKWEEDSESSSEESSDSSDGEVPTAVAPAQEKSL 495

Query: 523  -------PPVLPAPLTPHGTSPVGPPTPPPAPTDPQLTKARKQEEDDSLSDAGTYTI--- 572
                   P   PA   P    PV        P D   +     +  DS       T    
Sbjct: 496  GNILQAKPTSSPAKGPPQKAGPVAVQVKAEKPMDNSESSEESSDSADSEEAPAAMTAAQA 555

Query: 573  -------ETEA--QDTEVEEARKMIDQVFGVLESPELSRASS----------ATFRPVIR 613
                   +T+A  + T    + K+     G     +   A+S           T RP   
Sbjct: 556  KPALKIPQTKACPKKTNTTASAKVAPVRVGTQAPRKAGTATSPAGSSPAVAGGTQRPAED 615

Query: 614  GDRDESDDGGVAQRMALLQEFASRPLGAAPQAEHQGLPVPGSPG--------GQKWVSRW 665
                E  D    +    +    ++ +G   Q +   +PV GS G        G+   +  
Sbjct: 616  SSSSEESDSEEEKTGLAVTVGQAKSVGKGLQVKAASVPVKGSLGQGTAPVLPGKTGPTVT 675

Query: 666  ASLADSYSDPGLTEDGLGRRGGEPEGSLPVRMRRRLPQLPSERADSPAGPESSRR--SGP 723
               A+   D   +E+       E   + P +++  + +  ++   + A   S++   S P
Sbjct: 676  QVKAEKQEDSESSEE---ESDSEEAAASPAQVKTSVKKTQAKANPAAARAPSAKGTISAP 732

Query: 724  GPPELDSEQPSRLFGQEELDPDSLSDASGSDGGRGPE--PGVEPQDSRRRSPQEGPTWSR 781
            G     + Q  +     ++ P   +  + +   RGP   P V    +     Q GP    
Sbjct: 733  GKVVTAAAQAKQR-SPSKVKPPVRNPQNSTVLARGPASVPSVGKAVATAAQAQTGPEEDS 791

Query: 782  GRRSPRAPGEPTPASFFIGDQNGDAVLSRKPLAAPGDGEGLGQTAQPSPPARDGVYVSAN 841
            G     +  E    +      +G     R  LA   +    G  A P+PP + G   +  
Sbjct: 792  GSSEEESDSEEEAETLAQVKPSGKTHQIRAALAPAKESPRKG--AAPTPPGKTGPSAAQA 849

Query: 842  GRMVIQLRPGRSPEPDGPAPAFLRQESFTKEPASGPPAPGKPPHISSHPLLQDLAAT-RA 900
            G+           + DG APA +      K P         P   ++ P     A+T R 
Sbjct: 850  GKQDDSGSSSEESDSDGEAPAAVTSAQVIKPPLIFVDPNRSPAGPAATPAQAQAASTPRK 909

Query: 901  ARMDFHSQDTHLILKETETALAALEARLLSNSVDAECEGGSTPR-PPEDALSGDSDVDTA 959
            AR    +  +     E E  + A +        +      + PR  P+ +++G S    +
Sbjct: 910  ARASESTARSSSSESEDEDVIPATQCLTPGIRTNVVTMPTAHPRIAPKASMAGASSSKES 969

Query: 960  STVSLRSGKSGPSPTTPQPLRAQKEMSPSPPAAQDPGGTALVSAREQSSERQHHPLGPTD 1019
            S +S   GK    P T        ++S   PA+      AL    +++SE Q        
Sbjct: 970  SRIS--DGKKQEGPAT--------QVSKKNPASLPLTQAALKVLAQKASEAQ-------- 1011

Query: 1020 MGRGEPVRRSAIRRGHRPRGSLDWPSEERGPVLAHLPSSDVMASNHETPEATGAGRLGSR 1079
                 PV R+              PS      +  LP++   ++   + +A G  +L   
Sbjct: 1012 ----PPVARTQ-------------PSSGVDSAVGTLPATSPQST---SVQAKGTNKL--- 1048

Query: 1080 RKPAAP--------PPSPAAREEQSRSSASSQ---KGPQALTRSNSLSTPRPTRASRLRR 1128
            RKP  P        P S    E+ S SS+ S+   +GPQ    +++L  P P+R   L  
Sbjct: 1049 RKPKLPEVQQATKAPESSDDSEDSSDSSSGSEEDGEGPQGAKSAHTLG-PTPSRTETLVE 1107

Query: 1129 ARLGDASDTEAADGERGSL-GNPEPVGRPAAEQAKK 1163
                ++S+ +     +  L G   P   PA  QA K
Sbjct: 1108 ETAAESSEDDVVAPSQSLLSGYMTPGLTPANSQASK 1143



 Score = 58.5 bits (140), Expect = 5e-08
 Identities = 211/1025 (20%), Positives = 352/1025 (34%), Gaps = 222/1025 (21%)

Query: 410  DEDTPRKKR--------SQSFTHSPSGDPKADKRRG--PTPADRDRPSVPAPVQAGGRSS 459
            +E+TP  K           S   + S   K   R+G  P P  +  P+V A  QAG R  
Sbjct: 273  EEETPAAKALLQAKASGKTSQVGAASAPAKESPRKGAAPAPPGKTGPAV-AKAQAGKREE 331

Query: 460  GPQRAGSLKREKTEERLGSPSPASRTPARPFGSVGRRSRLAQDFMAQCLRESSPAARPSP 519
              Q + S + +  EE      P+ + P                     +R +S  A+ SP
Sbjct: 332  DSQ-SSSEESDSEEEAPAQAKPSGKAPQ--------------------VRAASAPAKESP 370

Query: 520  EKVPPVLPAPLTPHGTSPVGPPTPPPAPTDPQLTKARKQEEDDSLSDAGTYTIETEAQDT 579
             K            G +P  P    PA    Q+    KQEED   S        +E  D+
Sbjct: 371  RK------------GAAPAPPRKTGPAAAQVQV---GKQEEDSRSS--------SEESDS 407

Query: 580  EVEEARKM-IDQVFGVLESPELSRASSATFRPVIRGDRDESDDGGVAQRMALLQEFASRP 638
            + E    M   QV  + +SP++  AS+    P+ +G                        
Sbjct: 408  DREALAAMNAAQVKPLGKSPQVKPASTMGMGPLGKG------------------------ 443

Query: 639  LGAAPQAEHQGLPVPGSPGGQKWVSRWASLADSYSDPGLTEDGLGRRGGEPEGSLPVRMR 698
             G  P     G   P +P  Q  V +W   ++S S+    E      G  P    P + +
Sbjct: 444  AGPVP----PGKVGPATPSAQ--VGKWEEDSESSSE----ESSDSSDGEVPTAVAPAQEK 493

Query: 699  RRLPQLPSERADSPA-GPESSRRSGPGPPELDSEQP---------SRLFGQEELDPDSLS 748
                 L ++   SPA GP   +++GP   ++ +E+P         S      E  P +++
Sbjct: 494  SLGNILQAKPTSSPAKGP--PQKAGPVAVQVKAEKPMDNSESSEESSDSADSEEAPAAMT 551

Query: 749  DASGSDGGRGPEPGVEPQDSRRRSPQEGPTWSRGRRSPRAPGEPT--------------- 793
             A      + P+    P+ +   +  +      G ++PR  G  T               
Sbjct: 552  AAQAKPALKIPQTKACPKKTNTTASAKVAPVRVGTQAPRKAGTATSPAGSSPAVAGGTQR 611

Query: 794  PASFFIGDQNGDAVLSRKPLA-----APGDGEGLGQTAQPSPPARDGVYVSANGRMVIQL 848
            PA      +  D+   +  LA     A   G+GL Q    S P +  +     G+    +
Sbjct: 612  PAEDSSSSEESDSEEEKTGLAVTVGQAKSVGKGL-QVKAASVPVKGSL-----GQGTAPV 665

Query: 849  RPGRSPEPDGPAPAFLRQES-FTKEPASGPPAPGKPPHISSHPLLQDLAATRAARMDFHS 907
             PG++        A  +++S  ++E +    A   P  + +        A  AA     +
Sbjct: 666  LPGKTGPTVTQVKAEKQEDSESSEEESDSEEAAASPAQVKTSVKKTQAKANPAAARAPSA 725

Query: 908  QDTHLILKETETALAALEARLLSNSVDAECEGGSTPRPPEDALSGDSDVDTASTVSLRSG 967
            + T            +   ++++ +  A+    S  +PP             STV  R  
Sbjct: 726  KGT-----------ISAPGKVVTAAAQAKQRSPSKVKPPVRNPQN-------STVLARGP 767

Query: 968  KSGPSPTTPQPLRAQKEMSPSPPAAQDPGGTALVSAREQSSERQHHPLGPT-DMGRGEPV 1026
             S PS        AQ +  P     +D G     S  E  SE +   L      G+   +
Sbjct: 768  ASVPSVGKAVATAAQAQTGPE----EDSGS----SEEESDSEEEAETLAQVKPSGKTHQI 819

Query: 1027 RRSAIRRGHRPR-GSLDWPSEERGPVLAHLPSSDVMASNHETPEATGAGRLGSRRKPAAP 1085
            R +       PR G+   P  + GP  A     D   S+ E  ++ G             
Sbjct: 820  RAALAPAKESPRKGAAPTPPGKTGPSAAQAGKQDDSGSSSEESDSDGEAPAAVTSAQVIK 879

Query: 1086 PPSPAAREEQSRSSASSQKGPQALTRSNSLSTPRPTRASR-LRRARLGDASDTEAADGER 1144
            P  P    + +RS A     P    ++ + STPR  RAS    R+   ++ D +      
Sbjct: 880  P--PLIFVDPNRSPAGPAATP---AQAQAASTPRKARASESTARSSSSESEDEDVI---- 930

Query: 1145 GSLGNPEPVGRPAAEQAKKLSRLDILAMPRKR-----AGSFTGTSDPEAAPARTSFSGRS 1199
                       PA +      R +++ MP          S  G S  + +   +    + 
Sbjct: 931  -----------PATQCLTPGIRTNVVTMPTAHPRIAPKASMAGASSSKESSRISDGKKQE 979

Query: 1200 VELCCASRKP------TMAEARAVSRKAANTATTTGPRQPFSRARS--GSARYTS--TTQ 1249
                  S+K       T A  + +++KA+         QP S   S  G+   TS  +T 
Sbjct: 980  GPATQVSKKNPASLPLTQAALKVLAQKASEAQPPVARTQPSSGVDSAVGTLPATSPQSTS 1039

Query: 1250 TPRAGSSSRARSRAP-------GPRDTDDDEEEPDPYGFIVQTAEIAEIAR--------- 1293
                G++   + + P        P  +DD E+  D      +  E  + A+         
Sbjct: 1040 VQAKGTNKLRKPKLPEVQQATKAPESSDDSEDSSDSSSGSEEDGEGPQGAKSAHTLGPTP 1099

Query: 1294 -LSQTLVKDVAILAQEIHDVAGDGDTLGSS------EPAHSASLSNMP---STP--ASTI 1341
              ++TLV++ A  + E  DV     +L S        PA+S +    P   S+P  +ST+
Sbjct: 1100 SRTETLVEETAAESSE-DDVVAPSQSLLSGYMTPGLTPANSQASKATPKLDSSPSVSSTL 1158

Query: 1342 SAREE 1346
            +A+++
Sbjct: 1159 AAKDD 1163


>gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e
            [Homo sapiens]
          Length = 1451

 Score = 63.2 bits (152), Expect = 2e-09
 Identities = 243/1198 (20%), Positives = 407/1198 (33%), Gaps = 237/1198 (19%)

Query: 229  PTKETPQPSQPPE---VPAHEMPTKDAEAGGGGAAPVVQSHASFTIEFDDCSPGKMKIKD 285
            P+  T   S+  E   VPA     K      G A    +  +S + E D    GK  +K 
Sbjct: 163  PSANTTLVSETEEEGSVPAFGAAAKPGMVSAGQADSSSEDTSSSSDETD--VEGKPSVKP 220

Query: 286  -HITKFSLRQRRPPGKEATPGEMVSAETKVADWLVQND----PSLLHRVGPGDDRHSTKS 340
              +   S+  +  P ++A P     A  KV D   Q      P       P ++  S++ 
Sbjct: 221  AQVKASSVSTKESPARKAAP-----APGKVGDVTPQVKGGALPPAKRAKKPEEESESSEE 275

Query: 341  DLPVHTRTLKGHKHEDGTQSDSEDPLAKAASAAGVPLEAS-----GEQVRLQRQIKRDPQ 395
                      G + +           A +A A G P + +     G+   +  Q K    
Sbjct: 276  GSESEEEAPAGTRSQVKASEKILQVRAASAPAKGTPGKGATPAPPGKAGAVASQTKAGKP 335

Query: 396  ELLHNQQAFVIEFFDEDTPRKKR--------SQSFTHSPSGDPKADKRRG--PTPADRDR 445
            E      +      +E+TP  K           S   + S   K   R+G  P P  +  
Sbjct: 336  EEDSESSSEESSDSEEETPAAKALLQAKASGKTSQVGAASAPAKESPRKGAAPAPPGKTG 395

Query: 446  PSVPAPVQAGGRSSGPQRAGSLKREKTEERLGSPSPASRTPARPFGSVGRRSRLAQDFMA 505
            P+V A  QAG R    Q + S + +  EE      P+ + P                   
Sbjct: 396  PAV-AKAQAGKREEDSQ-SSSEESDSEEEAPAQAKPSGKAPQ------------------ 435

Query: 506  QCLRESSPAARPSPEKVPPVLPAPLTPHGTSPVGPPTPPPAPTDPQLTKARKQEEDDSLS 565
              +R +S  A+ SP K            G +P  P    PA    Q+    KQEED   S
Sbjct: 436  --VRAASAPAKESPRK------------GAAPAPPRKTGPAAAQVQV---GKQEEDSRSS 478

Query: 566  DAGTYTIETEAQDTEVEEARKM-IDQVFGVLESPELSRASSATFRPVIRGDRDESDDGGV 624
                    +E  D++ E    M   QV  + +SP++  AS+    P+ +G          
Sbjct: 479  --------SEESDSDREALAAMNAAQVKPLGKSPQVKPASTMGMGPLGKG---------- 520

Query: 625  AQRMALLQEFASRPLGAAPQAEHQGLPVPGSPGGQKWVSRWASLADSYSDPGLTEDGLGR 684
                           G  P     G   P +P  Q  V +W   ++S S+    E     
Sbjct: 521  --------------AGPVP----PGKVGPATPSAQ--VGKWEEDSESSSE----ESSDSS 556

Query: 685  RGGEPEGSLPVRMRRRLPQLPSERADSPA-GPESSRRSGPGPPELDSEQP---------S 734
             G  P    P + +     L ++   SPA GP   +++GP   ++ +E+P         S
Sbjct: 557  DGEVPTAVAPAQEKSLGNILQAKPTSSPAKGP--PQKAGPVAVQVKAEKPMDNSESSEES 614

Query: 735  RLFGQEELDPDSLSDASGSDGGRGPEPGVEPQDSRRRSPQEGPTWSRGRRSPRAPGEPT- 793
                  E  P +++ A      + P+    P+ +   +  +      G ++PR  G  T 
Sbjct: 615  SDSADSEEAPAAMTAAQAKPALKIPQTKACPKKTNTTASAKVAPVRVGTQAPRKAGTATS 674

Query: 794  --------------PASFFIGDQNGDAVLSRKPLA-----APGDGEGLGQTAQPSPPARD 834
                          PA      +  D+   +  LA     A   G+GL Q    S P + 
Sbjct: 675  PAGSSPAVAGGTQRPAEDSSSSEESDSEEEKTGLAVTVGQAKSVGKGL-QVKAASVPVKG 733

Query: 835  GVYVSANGRMVIQLRPGRSPEPDGPAPAFLRQES-FTKEPASGPPAPGKPPHISSHPLLQ 893
             +     G+    + PG++        A  +++S  ++E +    A   P  + +     
Sbjct: 734  SL-----GQGTAPVLPGKTGPTVTQVKAEKQEDSESSEEESDSEEAAASPAQVKTSVKKT 788

Query: 894  DLAATRAARMDFHSQDTHLILKETETALAALEARLLSNSVDAECEGGSTPRPPEDALSGD 953
               A  AA     ++ T            +   ++++ +  A+    S  +PP       
Sbjct: 789  QAKANPAAARAPSAKGT-----------ISAPGKVVTAAAQAKQRSPSKVKPPVRNPQN- 836

Query: 954  SDVDTASTVSLRSGKSGPSPTTPQPLRAQKEMSPSPPAAQDPGGTALVSAREQSSERQHH 1013
                  STV  R   S PS        AQ +  P     +D G     S  E  SE +  
Sbjct: 837  ------STVLARGPASVPSVGKAVATAAQAQTGPE----EDSGS----SEEESDSEEEAE 882

Query: 1014 PLGPT-DMGRGEPVRRSAIRRGHRPR-GSLDWPSEERGPVLAHLPSSDVMASNHETPEAT 1071
             L      G+   +R +       PR G+   P  + GP  A     D   S+ E  ++ 
Sbjct: 883  TLAQVKPSGKTHQIRAALAPAKESPRKGAAPTPPGKTGPSAAQAGKQDDSGSSSEESDSD 942

Query: 1072 GAGRLGSRRKPAAPPPSPAAREEQSRSSASSQKGPQALTRSNSLSTPRPTRASR-LRRAR 1130
            G             P  P    + +RS A     P    ++ + STPR  RAS    R+ 
Sbjct: 943  GEAPAAVTSAQVIKP--PLIFVDPNRSPAGPAATP---AQAQAASTPRKARASESTARSS 997

Query: 1131 LGDASDTEAADGERGSLGNPEPVGRPAAEQAKKLSRLDILAMPRKRAGSFTGTSDPEAAP 1190
              ++ D +                 PA +      R +++ MP         T+ P  AP
Sbjct: 998  SSESEDEDVI---------------PATQCLTPGIRTNVVTMP---------TAHPRIAP 1033

Query: 1191 ARTSFSGRSVELCCASRKPTMAEARAVSRKAANTATTTGPRQPFS-RARSGSARYTSTTQ 1249
             + S +G S     +     +++ +     A    +  G     S ++ S  A+ T+  +
Sbjct: 1034 -KASMAGAS----SSKESSRISDGKKQEGPATQVDSAVGTLPATSPQSTSVQAKGTNKLR 1088

Query: 1250 TPRAGSSSRARSRAPGPRDTDDDEEEPDPYGFIVQTAEIAEIARLSQTLV----KDVAIL 1305
             P+     +A      P  +DD E+  D      +  E  + A+ + TLV         L
Sbjct: 1089 KPKLPEVQQA---TKAPESSDDSEDSSDSSSGSEEDGEGPQGAKSAHTLVGPTPSRTETL 1145

Query: 1306 AQEIHDVAGDGDTLGSSE------------PAHSASLSNMP---STP--ASTISAREE 1346
             +E    + + D +  S+            PA+S +    P   S+P  +ST++A+++
Sbjct: 1146 VEETAAESSEDDVVAPSQSLLSGYMTPGLTPANSQASKATPKLDSSPSVSSTLAAKDD 1203



 Score = 53.9 bits (128), Expect = 1e-06
 Identities = 171/923 (18%), Positives = 296/923 (32%), Gaps = 102/923 (11%)

Query: 353  KHEDGTQSDSEDPLAKAASAAGVPLEASGEQVRL-QRQIKRDPQELLHNQQAFVIEFFDE 411
            K E+ +QS SE+  ++  + A         QVR      K  P++               
Sbjct: 405  KREEDSQSSSEESDSEEEAPAQAKPSGKAPQVRAASAPAKESPRKGA------------A 452

Query: 412  DTPRKKRSQSFTHSPSGDPKADKRRGPTPADRDRPSVPA----PVQAGGRSSGPQRAGSL 467
              P +K   +      G  + D R     +D DR ++ A     V+  G+S   + A ++
Sbjct: 453  PAPPRKTGPAAAQVQVGKQEEDSRSSSEESDSDREALAAMNAAQVKPLGKSPQVKPASTM 512

Query: 468  KREKTEERLGSPSPASRTPARPFGSVGRRSRLAQDFMAQCLRESS----PAARPSPEKV- 522
                  +  G   P    PA P   VG+    ++    +    S      A  P+ EK  
Sbjct: 513  GMGPLGKGAGPVPPGKVGPATPSAQVGKWEEDSESSSEESSDSSDGEVPTAVAPAQEKSL 572

Query: 523  -------PPVLPAPLTPHGTSPVGPPTPPPAPTDPQLTKARKQEEDDSLSDAGTYTI--- 572
                   P   PA   P    PV        P D   +     +  DS       T    
Sbjct: 573  GNILQAKPTSSPAKGPPQKAGPVAVQVKAEKPMDNSESSEESSDSADSEEAPAAMTAAQA 632

Query: 573  -------ETEA--QDTEVEEARKMIDQVFGVLESPELSRASS----------ATFRPVIR 613
                   +T+A  + T    + K+     G     +   A+S           T RP   
Sbjct: 633  KPALKIPQTKACPKKTNTTASAKVAPVRVGTQAPRKAGTATSPAGSSPAVAGGTQRPAED 692

Query: 614  GDRDESDDGGVAQRMALLQEFASRPLGAAPQAEHQGLPVPGSPG--------GQKWVSRW 665
                E  D    +    +    ++ +G   Q +   +PV GS G        G+   +  
Sbjct: 693  SSSSEESDSEEEKTGLAVTVGQAKSVGKGLQVKAASVPVKGSLGQGTAPVLPGKTGPTVT 752

Query: 666  ASLADSYSDPGLTEDGLGRRGGEPEGSLPVRMRRRLPQLPSERADSPAGPESSRR--SGP 723
               A+   D   +E+       E   + P +++  + +  ++   + A   S++   S P
Sbjct: 753  QVKAEKQEDSESSEE---ESDSEEAAASPAQVKTSVKKTQAKANPAAARAPSAKGTISAP 809

Query: 724  GPPELDSEQPSRLFGQEELDPDSLSDASGSDGGRGPE--PGVEPQDSRRRSPQEGPTWSR 781
            G     + Q  +     ++ P   +  + +   RGP   P V    +     Q GP    
Sbjct: 810  GKVVTAAAQAKQR-SPSKVKPPVRNPQNSTVLARGPASVPSVGKAVATAAQAQTGPEEDS 868

Query: 782  GRRSPRAPGEPTPASFFIGDQNGDAVLSRKPLAAPGDGEGLGQTAQPSPPARDGVYVSAN 841
            G     +  E    +      +G     R  LA   +    G  A P+PP + G   +  
Sbjct: 869  GSSEEESDSEEEAETLAQVKPSGKTHQIRAALAPAKESPRKG--AAPTPPGKTGPSAAQA 926

Query: 842  GRMVIQLRPGRSPEPDGPAPAFLRQESFTKEPASGPPAPGKPPHISSHPLLQDLAAT-RA 900
            G+           + DG APA +      K P         P   ++ P     A+T R 
Sbjct: 927  GKQDDSGSSSEESDSDGEAPAAVTSAQVIKPPLIFVDPNRSPAGPAATPAQAQAASTPRK 986

Query: 901  ARMDFHSQDTHLILKETETALAALEARLLSNSVDAECEGGSTPR-PPEDALSGDSDVDTA 959
            AR    +  +     E E  + A +        +      + PR  P+ +++G S    +
Sbjct: 987  ARASESTARSSSSESEDEDVIPATQCLTPGIRTNVVTMPTAHPRIAPKASMAGASSSKES 1046

Query: 960  STVSLRSGKSGPSPTTPQPLRAQKEMSPSPPAAQDPGGTALVSAR-EQSSERQHHPLGPT 1018
            S +S    + GP+      +      SP   + Q  G   L   +  +  +    P    
Sbjct: 1047 SRISDGKKQEGPATQVDSAVGTLPATSPQSTSVQAKGTNKLRKPKLPEVQQATKAPESSD 1106

Query: 1019 DMGRGEPVRRSAIRRGHRPRG-----SLDWPSEERGPVL-----AHLPSSDVMA------ 1062
            D          +   G  P+G     +L  P+  R   L     A     DV+A      
Sbjct: 1107 DSEDSSDSSSGSEEDGEGPQGAKSAHTLVGPTPSRTETLVEETAAESSEDDVVAPSQSLL 1166

Query: 1063 SNHETPEATGAGRLGSRRKP-----------AAPPPSPAAREEQSRSSASSQKGPQALTR 1111
            S + TP  T A    S+  P            A    P  ++E     A+    P+   +
Sbjct: 1167 SGYMTPGLTPANSQASKATPKLDSSPSVSSTLAAKDDPDGKQEAKPQQAAGMLSPKTGGK 1226

Query: 1112 SNSLSTPRPTRASRLRRARLGDASDTEAADGE--RGSLGNPEPVGRPAAEQAKKLSRLDI 1169
              +  T  P ++ + ++      + T A      +  LG P P+     + +      ++
Sbjct: 1227 EAASGT-TPQKSRKPKKGAGNPQASTLALQSNITQCLLGQPWPLNEAQVQASVVKVLTEL 1285

Query: 1170 LAMPRKRAGSFTGTSDPEAAPAR 1192
            L   RK+    T  S  +   +R
Sbjct: 1286 LEQERKKVVDTTKESSRKGWESR 1308



 Score = 53.5 bits (127), Expect = 2e-06
 Identities = 156/714 (21%), Positives = 254/714 (35%), Gaps = 142/714 (19%)

Query: 658  GQK-WVSRWASLADSYSDPGLTEDGLGRRGGEPEGSLPVRMRRRLPQLPSERADSPAGPE 716
            GQK ++++  +L D Y+    T + LGR+    E +     + R+    S    S    E
Sbjct: 35   GQKCFLAQPVTLLDIYTHWQQTSE-LGRKRKAEEDAALQAKKTRVSDPISTSESSEEEEE 93

Query: 717  SSRRSGPGPPELDSEQPSRLFGQEELDPDSLSDASGSDGGRGPEPGVEPQDSRRRSPQEG 776
            +   +    P L S   S L       P S+ + + ++  +  + G     +    P  G
Sbjct: 94   AEAETAKATPRLASTNSSVLGADL---PSSMKEKAKAETEKAGKTG-----NSMPHPATG 145

Query: 777  PTWSR--GRRSPRAPGEPTPASFFIGDQNGDAVLSRKPLAAPGDGEGLGQTAQPSPPARD 834
             T +     +SPR   EP+  +  + +   +  +     AA       GQ    S     
Sbjct: 146  KTVANLLSGKSPRKSAEPSANTTLVSETEEEGSVPAFGAAAKPGMVSAGQADSSSEDTS- 204

Query: 835  GVYVSANGRMVIQLRPGRSPEPDGPAPAFLRQESFTKEPASGPPAPGKPPHISSHPLLQD 894
                S++    ++ +P   P     A +   +ES  ++ A   PAPGK   ++  P ++ 
Sbjct: 205  ----SSSDETDVEGKPSVKPA-QVKASSVSTKESPARKAA---PAPGKVGDVT--PQVKG 254

Query: 895  LA---ATRAARMDFHSQDTHLILKETETALA-------ALEARLLSNSVDAECEG----G 940
             A   A RA + +  S+ +    +  E A A       A E  L   +  A  +G    G
Sbjct: 255  GALPPAKRAKKPEEESESSEEGSESEEEAPAGTRSQVKASEKILQVRAASAPAKGTPGKG 314

Query: 941  STPRPPEDA---------------------LSGDSDVDTASTVSL----RSGKSGP--SP 973
            +TP PP  A                      S DS+ +T +  +L     SGK+    + 
Sbjct: 315  ATPAPPGKAGAVASQTKAGKPEEDSESSSEESSDSEEETPAAKALLQAKASGKTSQVGAA 374

Query: 974  TTPQPLRAQKEMSPSPPAAQDPGGTAL---------VSAREQSSERQHHPLGPTDMGRGE 1024
            + P     +K  +P+PP    P               S+ E+S   +  P      G+  
Sbjct: 375  SAPAKESPRKGAAPAPPGKTGPAVAKAQAGKREEDSQSSSEESDSEEEAPAQAKPSGKAP 434

Query: 1025 PVRRSAIRRGHRPR-GSLDWPSEERGPVLAHL----PSSDVMASNHET------------ 1067
             VR ++      PR G+   P  + GP  A +       D  +S+ E+            
Sbjct: 435  QVRAASAPAKESPRKGAAPAPPRKTGPAAAQVQVGKQEEDSRSSSEESDSDREALAAMNA 494

Query: 1068 -------------PEAT-GAGRLGSRRKPAAP----PPSPAAR----EEQSRSSASSQKG 1105
                         P +T G G LG    P  P    P +P+A+    EE S SS+     
Sbjct: 495  AQVKPLGKSPQVKPASTMGMGPLGKGAGPVPPGKVGPATPSAQVGKWEEDSESSSEES-- 552

Query: 1106 PQALTRSNSLSTPRPTRASRLRRARLGDASDTEAADGERGSLGNPEPVGRPAAEQAKKLS 1165
                  S+S     PT  +  +   LG+    +A      + G P+  G P A Q K   
Sbjct: 553  ------SDSSDGEVPTAVAPAQEKSLGNI--LQAKPTSSPAKGPPQKAG-PVAVQVKAEK 603

Query: 1166 RLDILAMPRKRAGSFTGTSDPEAAPARTSFSGRSVELCCASRKPTM--AEARAVSRKAAN 1223
             +D      + + S    +D E APA          +  A  KP +   + +A  +K   
Sbjct: 604  PMDNSESSEESSDS----ADSEEAPA---------AMTAAQAKPALKIPQTKACPKK--- 647

Query: 1224 TATTTGPRQPFSRARSGSARYTSTTQTPRAGSSSRARSRAPGPRDTDDDEEEPD 1277
            T TT   +    R  + + R   T  +P AGSS         P +     EE D
Sbjct: 648  TNTTASAKVAPVRVGTQAPRKAGTATSP-AGSSPAVAGGTQRPAEDSSSSEESD 700


>gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens]
          Length = 2303

 Score = 63.2 bits (152), Expect = 2e-09
 Identities = 177/765 (23%), Positives = 253/765 (33%), Gaps = 164/765 (21%)

Query: 193  ERPKGPVQQDGELHGFRAPAEPQGCSFRREPSYFEIPTK------------ETPQPSQPP 240
            ERP+G  +++       APA P     R +PS     T               P+PS+PP
Sbjct: 1540 ERPQG--RKEAPAPSKAAPAAPPPA--RTQPSLIADETPPCYSLSSSASSLSEPEPSEPP 1595

Query: 241  EV-PAHEMP--TKDAEAGGGGAAPVVQSHASFTIE--FDDCSP-------GKMKIKDHIT 288
             V P    P  TKD   GGG  +      A   ++       P       G  + K   T
Sbjct: 1596 AVHPRGREPAVTKDPGPGGGRDSSPSPRAAEELLQRCISSALPRRRPPVSGLRRRKPRAT 1655

Query: 289  KFSLRQR---RPPGKEATPGEMVS------------AETKVADWLVQNDPSLLHRVGPGD 333
            +   R     R  G+EA   +  S                +  WL Q   +        D
Sbjct: 1656 RLDERPAEGSRERGEEAAGSDRASDLDSVEWRAIQEGANSIVTWLHQAAAATREASSESD 1715

Query: 334  DRHSTKSDLPVHTRTLKGHKHEDGTQSDSEDPLAKAASAAGVP-LEASGEQVRLQRQIKR 392
               S  S L V + TL+  KH  G Q++ E   A+     G   ++ SG       +   
Sbjct: 1716 SILSFVSGLSVGS-TLQPPKHRKGRQAEGEMGSARRPEKRGAASVKTSGSP-----RSPA 1769

Query: 393  DPQELLHNQQAFVIEFFDEDTPRKKRSQSFTHSPSGDPKADKRRGPTPADRDR------- 445
             P++    Q+           P   R ++  + PS  P+A  +  P P    R       
Sbjct: 1770 GPEKPRGTQKT------TPGVPAVLRGRTVIYVPSPAPRAQPKGTPGPRATPRKVAPPCL 1823

Query: 446  --PSVPAPVQAGGRSSGPQRAGSLKREKTEERLGSPSPASRTPARPFGSVGRRSRLAQDF 503
              P+ PA V     S G QR+ SL R      L + S   R+   P       +RLA+  
Sbjct: 1824 AQPAAPAKVP----SPGQQRSRSLHRPAKTSELATLSQPPRSATPP-------ARLAKT- 1871

Query: 504  MAQCLRESSPAARPSPEKVPPVL------------PAPLTPHGT----------SPV--- 538
             +    ++SPA++P P K PPV             P P TP  T          SPV   
Sbjct: 1872 PSSSSSQTSPASQPLPRKRPPVTQAAGALPGPGASPVPKTPARTLLAKQHKTQRSPVRIP 1931

Query: 539  --------GPP-----TPPPAPTDPQLTKARKQEEDDSLSDAGTYTIETE-AQDTEVEEA 584
                    GPP      P P P     T+A        L   G   + +  +  +E  + 
Sbjct: 1932 FMQRPARRGPPPLARAVPEPGPRGRAGTEAGPGARGGRL---GLVRVASALSSGSESSDR 1988

Query: 585  RKMIDQVFGVLESP-------ELSRASSATFRPVIRGDRDESDDGGVAQRMALLQEFASR 637
                 Q+  + ESP       ELS A SA   P     R     G  A     L      
Sbjct: 1989 SGFRRQLTFIKESPGLRRRRSELSSAESAASAPQGASPR----RGRPALPAVFLCSSRCE 2044

Query: 638  PLGAAPQ----AEHQGLPVPGSPGGQKWVSRWASLADS---YSDPGLTEDGLGRRGGEPE 690
             L AAP+       Q  P      G++   R  S + S      P    + + R    P 
Sbjct: 2045 ELRAAPRQGPAPARQRPPAARPSPGERPARRTTSESPSRLPVRAPAARPETVKRYASLPH 2104

Query: 691  GSLPVRMRRRLPQLPSERADSPAGPESSRRSGPGPPE---------------LDSEQPSR 735
             S+  R    +P        +PA  +++RRS  G P                 D + P  
Sbjct: 2105 ISVARRPDGAVPA-------APASADAARRSSDGEPRPLPRVAAPGTTWRRIRDEDVPHI 2157

Query: 736  LFGQEELDPDSLSDASGSDGGRGPEP----GVEPQDSRRRSPQEGPTWSRGRRSPRAPGE 791
            L          L  ++  D   GP P        Q     +P+   + S    +   PG 
Sbjct: 2158 LRSTLPATALPLRGSTPEDAPAGPPPRKTSDAVVQTEEVAAPKTNSSTSPSLETREPPGA 2217

Query: 792  PTPASF-FIGDQNGDAVLSRKPLAAPGDGEGLGQTAQPSPPARDG 835
            P       +G       L++ P++AP   EGLG      P +R G
Sbjct: 2218 PAGGQLSLLGSDVDGPSLAKAPISAPFVHEGLGVAVGGFPASRHG 2262



 Score = 51.2 bits (121), Expect = 8e-06
 Identities = 199/874 (22%), Positives = 289/874 (33%), Gaps = 167/874 (19%)

Query: 451  PVQAGGRS-SGPQRAGSLKREKTEERLGSPSPASRTPARPFGSVGRRSRLAQDFMAQCLR 509
            P + GG   +G   AG  +RE+       P+P   T +RP G+  +   L    + +CL 
Sbjct: 1302 PERGGGAGGAGLHFAGHRRREE------GPAP---TGSRPRGAADQELEL----LRECLG 1348

Query: 510  ESSPAA--RPSPEKVPPVLPAPLTPHGTSPVGPPTPPPAPTDPQLTKARKQEEDDSLSDA 567
             + PA   + +   VP     P+      PV    P PAP           +EDDS +D+
Sbjct: 1349 AAVPARLRKVASALVPGRRALPV------PVYMLVPAPAPA----------QEDDSCTDS 1392

Query: 568  GTYTIETEAQDTEVEEARKMIDQVFGVLESPELSRASSATFRPVIRGDRDESDDGGVAQR 627
                   E        A  + D+    L+ P                 RD+   GG A R
Sbjct: 1393 A------EGTPVNFSSAASLSDET---LQGPP----------------RDQP--GGPAGR 1425

Query: 628  MALLQEFASRPLGAAPQAEHQGLPVPGSPGGQKWVSRWASLADSYSDPGLTEDGLGRRGG 687
                Q    RP  A     H+     G  G     SR A      +  GL E  LGR   
Sbjct: 1426 ----QRPTGRPTSARQAMGHRHKA--GGAGRSAEQSRGAGK----NRAGL-ELPLGRPPS 1474

Query: 688  EP---EGSLPVRMRR--RLPQL----PSERA-------DSPAGPESSRRSGPGPPELDSE 731
             P   +GS P R R    L  L    P+E A       DS   P ++    P P    + 
Sbjct: 1475 APADKDGSKPGRTRGDGALQSLCLTTPTEEAVYCFYGNDSDEEPPAA---APTPTHRRTS 1531

Query: 732  QPSRLFGQEELDPDSLSDASGSDGGRGPEPG-VEPQDSRRRSPQEGPTWSRGRRSPRAPG 790
               R F +E       + A        P P   +P      +P   P +S    S  +  
Sbjct: 1532 AIPRAFTRERPQGRKEAPAPSKAAPAAPPPARTQPSLIADETP---PCYSLSS-SASSLS 1587

Query: 791  EPTPASFFIGDQNGDAVLSRKPLAAPGDGEGLGQTAQPSPPARDGVYVSANGRMVIQLRP 850
            EP P+        G     R+P      G G G+ + PSP A + +      R +    P
Sbjct: 1588 EPEPSEPPAVHPRG-----REPAVTKDPGPGGGRDSSPSPRAAEELLQ----RCISSALP 1638

Query: 851  GRSPEPDGPAPAFLRQESFTKEPASGPPAPGKPPHISSHPLLQDLAATRAARMDFHSQDT 910
             R P   G      R     + PA G    G+    S      D    RA +   +S  T
Sbjct: 1639 RRRPPVSGLRRRKPRATRLDERPAEGSRERGEEAAGSDRASDLDSVEWRAIQEGANSIVT 1698

Query: 911  HLILKETETALAALEARLLSNSVDAECEG---GSTPRPPEDALSGDSDVDTAST------ 961
             L     + A A  EA   S+S+ +   G   GST +PP+      ++ +  S       
Sbjct: 1699 WL----HQAAAATREASSESDSILSFVSGLSVGSTLQPPKHRKGRQAEGEMGSARRPEKR 1754

Query: 962  --VSLRSGKSGPSPTTPQPLRAQKEMSPSPPAAQDPGGTALVSAREQSSERQHHPLGPTD 1019
               S+++  S  SP  P+  R  ++ +P  PA         V +             P  
Sbjct: 1755 GAASVKTSGSPRSPAGPEKPRGTQKTTPGVPAVLRGRTVIYVPSP-----------APRA 1803

Query: 1020 MGRGEPVRRSAIRRGHRPRGSLDWPSEERGPVLAHLPSSDVMASNHETPEATGAGRLGSR 1079
              +G P  R+  R+   P       ++   P     P      S H   + +    L   
Sbjct: 1804 QPKGTPGPRATPRKVAPP-----CLAQPAAPAKVPSPGQQRSRSLHRPAKTSELATLSQP 1858

Query: 1080 RKPAAPPPSPAAREEQSRSSASSQKGPQ----------------ALTRSNSLSTPRPTRA 1123
             + A PP    AR  ++ SS+SSQ  P                 AL    +   P+    
Sbjct: 1859 PRSATPP----ARLAKTPSSSSSQTSPASQPLPRKRPPVTQAAGALPGPGASPVPKTPAR 1914

Query: 1124 SRLRRARLGDASDTEAADGERGSLGNPEPVGRPAAEQAKKLSRLDILAMPRKRAGSFTGT 1183
            + L +      S       +R +   P P+ R   E   +  R    A P  R G     
Sbjct: 1915 TLLAKQHKTQRSPVRIPFMQRPARRGPPPLARAVPEPGPR-GRAGTEAGPGARGGRLGLV 1973

Query: 1184 SDPEAAPARTSFSGRS---VELCCASRKPTMAEARAVSRKAANTATTTGPRQPFSRARSG 1240
                A  + +  S RS    +L      P +   R+    A + A+      P  R R  
Sbjct: 1974 RVASALSSGSESSDRSGFRRQLTFIKESPGLRRRRSELSSAESAASAPQGASP-RRGRPA 2032

Query: 1241 -------SARYTSTTQTPRAGSSSRARSRAPGPR 1267
                   S+R       PR G +  AR R P  R
Sbjct: 2033 LPAVFLCSSRCEELRAAPRQGPAP-ARQRPPAAR 2065



 Score = 50.1 bits (118), Expect = 2e-05
 Identities = 164/801 (20%), Positives = 257/801 (32%), Gaps = 106/801 (13%)

Query: 444  DRPSVPAPVQAGGRSSGPQRAGSLKREKTEERLGSPSPASRTPARPFGSVGRRSRLAQDF 503
            + P   AP     R+S   RA    RE+ + R  +P+P+   PA P  +  + S +A + 
Sbjct: 1516 EEPPAAAPTPTHRRTSAIPRA--FTRERPQGRKEAPAPSKAAPAAPPPARTQPSLIADET 1573

Query: 504  MAQCLRESSPAARPSPEKVPPVLPAPLTPHGTSPVGPPTPPPAPTDPQLTKARKQEEDDS 563
                   SS ++   PE   P  P  + P G  P    T  P P   + +    +  ++ 
Sbjct: 1574 PPCYSLSSSASSLSEPE---PSEPPAVHPRGREPA--VTKDPGPGGGRDSSPSPRAAEEL 1628

Query: 564  LSDAGTYTIETEAQDTEVEEARKMIDQVFGVLESPELSRASSATFRPVIRGDRDESDDGG 623
            L    +  +            RK               RA+    RP   G R+  ++  
Sbjct: 1629 LQRCISSALPRRRPPVSGLRRRK--------------PRATRLDERPA-EGSRERGEEAA 1673

Query: 624  VAQRMALLQEFASRPLGAAPQA----EHQGLPVPGSPGGQKWVSRWASLADSYSDPGLTE 679
             + R + L     R +     +     HQ          +       S     S     +
Sbjct: 1674 GSDRASDLDSVEWRAIQEGANSIVTWLHQAAAATREASSES--DSILSFVSGLSVGSTLQ 1731

Query: 680  DGLGRRGGEPEGSLPVRMRRRLPQLPSERAD----SPAGPESSRRSGPGPPELDSEQPSR 735
                R+G + EG +    R       S +      SPAGPE  R +    P +    P+ 
Sbjct: 1732 PPKHRKGRQAEGEMGSARRPEKRGAASVKTSGSPRSPAGPEKPRGTQKTTPGV----PAV 1787

Query: 736  LFGQEEL---DPDSLSDASGSDGGRGPEPGVEP-----QDSRRRSPQEGPTWSRGRRSPR 787
            L G+  +    P   +   G+ G R     V P       +  + P  G   SR    P 
Sbjct: 1788 LRGRTVIYVPSPAPRAQPKGTPGPRATPRKVAPPCLAQPAAPAKVPSPGQQRSRSLHRPA 1847

Query: 788  APGEPTPASFFIGDQNGDAVLSRKPLAAPGDGEGLGQTAQPSPPARDGVYVSANGRMVIQ 847
               E    S         A L++ P ++          +QP P  R  V  +A       
Sbjct: 1848 KTSELATLSQPPRSATPPARLAKTPSSSSSQ---TSPASQPLPRKRPPVTQAAGALP--- 1901

Query: 848  LRPGRSPEPDGPAPAFLRQESFTKEPASGPPAPGKPPHISSHPLLQDLAATRAARMDFHS 907
              PG SP P  PA   L ++  T+      P   +P      PL + +            
Sbjct: 1902 -GPGASPVPKTPARTLLAKQHKTQRSPVRIPFMQRPARRGPPPLARAVPEPGPRGR---- 1956

Query: 908  QDTHLILKETETALAALEARLLSNSVDAECEGGSTPRPPEDALSGDSDVDTASTVSLRSG 967
                     TE    A   RL    V +    GS         S D          ++  
Sbjct: 1957 -------AGTEAGPGARGGRLGLVRVASALSSGSE--------SSDRSGFRRQLTFIKE- 2000

Query: 968  KSGPSPTTPQPLRAQKEMSPSPPAAQDPGGT----------ALVSAREQSSERQHHP-LG 1016
                   +P   R + E+S +  AA  P G           A+     +  E +  P  G
Sbjct: 2001 -------SPGLRRRRSELSSAESAASAPQGASPRRGRPALPAVFLCSSRCEELRAAPRQG 2053

Query: 1017 PTDMGRGEPVRRSAIRRGHRPRGSLDWPSEERGPVLAHLPSSDVMASNHETPEATGAGRL 1076
            P    +  P  R +   G RP       S  R PV A     + +      P  + A   
Sbjct: 2054 PAPARQRPPAARPS--PGERPARRTTSESPSRLPVRAPAARPETVKRYASLPHISVA--- 2108

Query: 1077 GSRRKPAAPPPSPAAREEQSRSSASSQKG-PQALTRSNSLSTPRPTRASRLRRARLGDAS 1135
              RR   A P +PA+ +   RSS    +  P+      +    R      + R+ L    
Sbjct: 2109 --RRPDGAVPAAPASADAARRSSDGEPRPLPRVAAPGTTWRRIRDEDVPHILRSTL---- 2162

Query: 1136 DTEAADGERGSLGNPEPVGRPAAEQAKKLSRLDILAMPRKRAGSFTG--TSDPEAAPA-- 1191
                A   RGS     P G P  + +  + + + +A P+  + +     T +P  APA  
Sbjct: 2163 -PATALPLRGSTPEDAPAGPPPRKTSDAVVQTEEVAAPKTNSSTSPSLETREPPGAPAGG 2221

Query: 1192 RTSFSGRSVELCCASRKPTMA 1212
            + S  G  V+    ++ P  A
Sbjct: 2222 QLSLLGSDVDGPSLAKAPISA 2242



 Score = 35.8 bits (81), Expect = 0.33
 Identities = 79/333 (23%), Positives = 131/333 (39%), Gaps = 60/333 (18%)

Query: 963  SLRSGKSGPSPTTPQPLRAQKEM---SPSPPAAQDPGGTALVSAREQSSERQHHPL--GP 1017
            +L S +  P    P+P R   ++      PPA +     A V   + S   QH PL  G 
Sbjct: 949  ALASRREDPRCGQPRPSRLDLDLPGCQAEPPAREATSADARVRTIKLSPTYQHVPLLEGA 1008

Query: 1018 TDMGRGEPVRRSAIRRGHRPRGSLDWPSEERGPVLAHLPSSDVMASNHETPEATGAGRLG 1077
            +  G  EP+    I  G R +              A LP+  +     + PE        
Sbjct: 1009 SRAG-AEPLAGPGISPGARKQ--------------AWLPADHLS----KVPE-------- 1041

Query: 1078 SRRKPAAPPPSPAAREEQSRSSASSQKGPQALTRSNSLSTPRPTRASRLRRARLGDASDT 1137
               K AA P S A++  Q     ++Q+GP +L+R +SLS+   + A R   +  GD  D+
Sbjct: 1042 ---KLAAAPLSVASKALQK---LAAQEGPLSLSRCSSLSS--LSSAGRPGPSEGGDLDDS 1093

Query: 1138 EAADGERGSLGNPEPVGRPAAE-----QAKKLSRLDI-LAMPRKRAGSFTGTSDPEAAPA 1191
            ++      SL   E  G   AE     +A   + L + +  PR+  G   G  D  A P+
Sbjct: 1094 DS------SLEGLEEAGPSEAELDSTWRAPGATSLPVAIPAPRRNRGRGLGVED--ATPS 1145

Query: 1192 RTSFSGRSVELCCASRKPTMAEARAVSRKAANTATTTGPRQPFSRARSGSARYTSTTQTP 1251
             +S +         SR    +   ++    + +  ++ P +P S   SG+    S ++ P
Sbjct: 1146 SSSENYVQETPLVLSR---CSSVSSLGSFESPSIASSIPSEPCSGQGSGT---ISPSELP 1199

Query: 1252 RAGSSSRARSRAPGPRDTDDDEEEPDPYGFIVQ 1284
             +   +   SR+  P      +  P+   F +Q
Sbjct: 1200 DSPGQTMPPSRSKTPPLAPAPQGPPEATQFSLQ 1232


>gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d
            [Homo sapiens]
          Length = 1488

 Score = 62.0 bits (149), Expect = 4e-09
 Identities = 175/876 (19%), Positives = 293/876 (33%), Gaps = 125/876 (14%)

Query: 353  KHEDGTQSDSEDPLAKAASAAGVPLEASGEQVRL-QRQIKRDPQELLHNQQAFVIEFFDE 411
            K E+ +QS SE+  ++  + A         QVR      K  P++               
Sbjct: 405  KREEDSQSSSEESDSEEEAPAQAKPSGKAPQVRAASAPAKESPRKGA------------A 452

Query: 412  DTPRKKRSQSFTHSPSGDPKADKRRGPTPADRDRPSVPA----PVQAGGRSSGPQRAGSL 467
              P +K   +      G  + D R     +D DR ++ A     V+  G+S   + A ++
Sbjct: 453  PAPPRKTGPAAAQVQVGKQEEDSRSSSEESDSDREALAAMNAAQVKPLGKSPQVKPASTM 512

Query: 468  KREKTEERLGSPSPASRTPARPFGSVGRRSRLAQDFMAQCLRESS----PAARPSPEKV- 522
                  +  G   P    PA P   VG+    ++    +    S      A  P+ EK  
Sbjct: 513  GMGPLGKGAGPVPPGKVGPATPSAQVGKWEEDSESSSEESSDSSDGEVPTAVAPAQEKSL 572

Query: 523  -------PPVLPAPLTPHGTSPVGPPTPPPAPTDPQLTKARKQEEDDSLSDAGTYTI--- 572
                   P   PA   P    PV        P D   +     +  DS       T    
Sbjct: 573  GNILQAKPTSSPAKGPPQKAGPVAVQVKAEKPMDNSESSEESSDSADSEEAPAAMTAAQA 632

Query: 573  -------ETEA--QDTEVEEARKMIDQVFGVLESPELSRASS----------ATFRPVIR 613
                   +T+A  + T    + K+     G     +   A+S           T RP   
Sbjct: 633  KPALKIPQTKACPKKTNTTASAKVAPVRVGTQAPRKAGTATSPAGSSPAVAGGTQRPAED 692

Query: 614  GDRDESDDGGVAQRMALLQEFASRPLGAAPQAEHQGLPVPGSPG--------GQKWVSRW 665
                E  D    +    +    ++ +G   Q +   +PV GS G        G+   +  
Sbjct: 693  SSSSEESDSEEEKTGLAVTVGQAKSVGKGLQVKAASVPVKGSLGQGTAPVLPGKTGPTVT 752

Query: 666  ASLADSYSDPGLTEDGLGRRGGEPEGSLPVRMRRRLPQLPSERADSPAGPESSRR--SGP 723
               A+   D   +E+       E   + P +++  + +  ++   + A   S++   S P
Sbjct: 753  QVKAEKQEDSESSEE---ESDSEEAAASPAQVKTSVKKTQAKANPAAARAPSAKGTISAP 809

Query: 724  GPPELDSEQPSRLFGQEELDPDSLSDASGSDGGRGPE--PGVEPQDSRRRSPQEGPTWSR 781
            G     + Q  +     ++ P   +  + +   RGP   P V    +     Q GP    
Sbjct: 810  GKVVTAAAQAKQR-SPSKVKPPVRNPQNSTVLARGPASVPSVGKAVATAAQAQTGPEEDS 868

Query: 782  GRRSPRAPGEPTPASFFIGDQNGDAVLSRKPLAAPGDGEGLGQTAQPSPPARDGVYVSAN 841
            G     +  E    +      +G     R  LA   +    G  A P+PP + G   +  
Sbjct: 869  GSSEEESDSEEEAETLAQVKPSGKTHQIRAALAPAKESPRKG--AAPTPPGKTGPSAAQA 926

Query: 842  GRMVIQLRPGRSPEPDGPAPAFLRQESFTKEPASGPPAPGKPPHISSHPLLQDLAAT-RA 900
            G+           + DG APA +      K P         P   ++ P     A+T R 
Sbjct: 927  GKQDDSGSSSEESDSDGEAPAAVTSAQVIKPPLIFVDPNRSPAGPAATPAQAQAASTPRK 986

Query: 901  ARMDFHSQDTHLILKETETALAALEARLLSNSVDAECEGGSTPR-PPEDALSGDSDVDTA 959
            AR    +  +     E E  + A +        +      + PR  P+ +++G S    +
Sbjct: 987  ARASESTARSSSSESEDEDVIPATQCLTPGIRTNVVTMPTAHPRIAPKASMAGASSSKES 1046

Query: 960  STVSLRSGKSGPSPTTPQPLRAQKEMSPSPPAAQDPGGTALVSAREQSSERQHHPLGPTD 1019
            S +S   GK    P T        ++S   PA+      AL    +++SE Q        
Sbjct: 1047 SRIS--DGKKQEGPAT--------QVSKKNPASLPLTQAALKVLAQKASEAQ-------- 1088

Query: 1020 MGRGEPVRRSAIRRGHRPRGSLDWPSEERGPVLAHLPSSDVMASNHETPEATGAGRLGSR 1079
                 PV R+              PS      +  LP++   ++   + +A G  +L   
Sbjct: 1089 ----PPVARTQ-------------PSSGVDSAVGTLPATSPQST---SVQAKGTNKL--- 1125

Query: 1080 RKPAAP--------PPSPAAREEQSRSSASSQ---KGPQALTRSNSLSTPRPTRASRLRR 1128
            RKP  P        P S    E+ S SS+ S+   +GPQ    +++L  P P+R   L  
Sbjct: 1126 RKPKLPEVQQATKAPESSDDSEDSSDSSSGSEEDGEGPQGAKSAHTLG-PTPSRTETLVE 1184

Query: 1129 ARLGDASDTEAADGERGSL-GNPEPVGRPAAEQAKK 1163
                ++S+ +     +  L G   P   PA  QA K
Sbjct: 1185 ETAAESSEDDVVAPSQSLLSGYMTPGLTPANSQASK 1220



 Score = 61.2 bits (147), Expect = 7e-09
 Identities = 249/1219 (20%), Positives = 413/1219 (33%), Gaps = 242/1219 (19%)

Query: 229  PTKETPQPSQPPE---VPAHEMPTKDAEAGGGGAAPVVQSHASFTIEFDDCSPGKMKIKD 285
            P+  T   S+  E   VPA     K      G A    +  +S + E D    GK  +K 
Sbjct: 163  PSANTTLVSETEEEGSVPAFGAAAKPGMVSAGQADSSSEDTSSSSDETD--VEGKPSVKP 220

Query: 286  -HITKFSLRQRRPPGKEATPGEMVSAETKVADWLVQND----PSLLHRVGPGDDRHSTKS 340
              +   S+  +  P ++A P     A  KV D   Q      P       P ++  S++ 
Sbjct: 221  AQVKASSVSTKESPARKAAP-----APGKVGDVTPQVKGGALPPAKRAKKPEEESESSEE 275

Query: 341  DLPVHTRTLKGHKHEDGTQSDSEDPLAKAASAAGVPLEAS-----GEQVRLQRQIKRDPQ 395
                      G + +           A +A A G P + +     G+   +  Q K    
Sbjct: 276  GSESEEEAPAGTRSQVKASEKILQVRAASAPAKGTPGKGATPAPPGKAGAVASQTKAGKP 335

Query: 396  ELLHNQQAFVIEFFDEDTPRKKR--------SQSFTHSPSGDPKADKRRG--PTPADRDR 445
            E      +      +E+TP  K           S   + S   K   R+G  P P  +  
Sbjct: 336  EEDSESSSEESSDSEEETPAAKALLQAKASGKTSQVGAASAPAKESPRKGAAPAPPGKTG 395

Query: 446  PSVPAPVQAGGRSSGPQRAGSLKREKTEERLGSPSPASRTPARPFGSVGRRSRLAQDFMA 505
            P+V A  QAG R    Q + S + +  EE      P+ + P                   
Sbjct: 396  PAV-AKAQAGKREEDSQ-SSSEESDSEEEAPAQAKPSGKAPQ------------------ 435

Query: 506  QCLRESSPAARPSPEKVPPVLPAPLTPHGTSPVGPPTPPPAPTDPQLTKARKQEEDDSLS 565
              +R +S  A+ SP K            G +P  P    PA    Q+    KQEED   S
Sbjct: 436  --VRAASAPAKESPRK------------GAAPAPPRKTGPAAAQVQV---GKQEEDSRSS 478

Query: 566  DAGTYTIETEAQDTEVEEARKM-IDQVFGVLESPELSRASSATFRPVIRGDRDESDDGGV 624
                    +E  D++ E    M   QV  + +SP++  AS+    P+ +G          
Sbjct: 479  --------SEESDSDREALAAMNAAQVKPLGKSPQVKPASTMGMGPLGKG---------- 520

Query: 625  AQRMALLQEFASRPLGAAPQAEHQGLPVPGSPGGQKWVSRWASLADSYSDPGLTEDGLGR 684
                           G  P     G   P +P  Q  V +W   ++S S+    E     
Sbjct: 521  --------------AGPVP----PGKVGPATPSAQ--VGKWEEDSESSSE----ESSDSS 556

Query: 685  RGGEPEGSLPVRMRRRLPQLPSERADSPA-GPESSRRSGPGPPELDSEQP---------S 734
             G  P    P + +     L ++   SPA GP   +++GP   ++ +E+P         S
Sbjct: 557  DGEVPTAVAPAQEKSLGNILQAKPTSSPAKGP--PQKAGPVAVQVKAEKPMDNSESSEES 614

Query: 735  RLFGQEELDPDSLSDASGSDGGRGPEPGVEPQDSRRRSPQEGPTWSRGRRSPRAPGEPT- 793
                  E  P +++ A      + P+    P+ +   +  +      G ++PR  G  T 
Sbjct: 615  SDSADSEEAPAAMTAAQAKPALKIPQTKACPKKTNTTASAKVAPVRVGTQAPRKAGTATS 674

Query: 794  --------------PASFFIGDQNGDAVLSRKPLA-----APGDGEGLGQTAQPSPPARD 834
                          PA      +  D+   +  LA     A   G+GL Q    S P + 
Sbjct: 675  PAGSSPAVAGGTQRPAEDSSSSEESDSEEEKTGLAVTVGQAKSVGKGL-QVKAASVPVKG 733

Query: 835  GVYVSANGRMVIQLRPGRSPEPDGPAPAFLRQES-FTKEPASGPPAPGKPPHISSHPLLQ 893
             +     G+    + PG++        A  +++S  ++E +    A   P  + +     
Sbjct: 734  SL-----GQGTAPVLPGKTGPTVTQVKAEKQEDSESSEEESDSEEAAASPAQVKTSVKKT 788

Query: 894  DLAATRAARMDFHSQDTHLILKETETALAALEARLLSNSVDAECEGGSTPRPPEDALSGD 953
               A  AA     ++ T            +   ++++ +  A+    S  +PP       
Sbjct: 789  QAKANPAAARAPSAKGT-----------ISAPGKVVTAAAQAKQRSPSKVKPPVRNPQN- 836

Query: 954  SDVDTASTVSLRSGKSGPSPTTPQPLRAQKEMSPSPPAAQDPGGTALVSAREQSSERQHH 1013
                  STV  R   S PS        AQ +  P     +D G     S  E  SE +  
Sbjct: 837  ------STVLARGPASVPSVGKAVATAAQAQTGPE----EDSGS----SEEESDSEEEAE 882

Query: 1014 PLGPT-DMGRGEPVRRSAIRRGHRPR-GSLDWPSEERGPVLAHLPSSDVMASNHETPEAT 1071
             L      G+   +R +       PR G+   P  + GP  A     D   S+ E  ++ 
Sbjct: 883  TLAQVKPSGKTHQIRAALAPAKESPRKGAAPTPPGKTGPSAAQAGKQDDSGSSSEESDSD 942

Query: 1072 GAGRLGSRRKPAAPPPSPAAREEQSRSSASSQKGPQALTRSNSLSTPRPTRASR-LRRAR 1130
            G             P  P    + +RS A     P    ++ + STPR  RAS    R+ 
Sbjct: 943  GEAPAAVTSAQVIKP--PLIFVDPNRSPAGPAATP---AQAQAASTPRKARASESTARSS 997

Query: 1131 LGDASDTEAADGERGSLGNPEPVGRPAAEQAKKLSRLDILAMPRKR-----AGSFTGTSD 1185
              ++ D +                 PA +      R +++ MP          S  G S 
Sbjct: 998  SSESEDEDVI---------------PATQCLTPGIRTNVVTMPTAHPRIAPKASMAGASS 1042

Query: 1186 PEAAPARTSFSGRSVELCCASRKP------TMAEARAVSRKAANTATTTGPRQPFSRARS 1239
             + +   +    +       S+K       T A  + +++KA+         QP S   S
Sbjct: 1043 SKESSRISDGKKQEGPATQVSKKNPASLPLTQAALKVLAQKASEAQPPVARTQPSSGVDS 1102

Query: 1240 --GSARYTS--TTQTPRAGSSSRARSRAP-------GPRDTDDDEEEPDPYGFIVQTAEI 1288
              G+   TS  +T     G++   + + P        P  +DD E+  D      +  E 
Sbjct: 1103 AVGTLPATSPQSTSVQAKGTNKLRKPKLPEVQQATKAPESSDDSEDSSDSSSGSEEDGEG 1162

Query: 1289 AEIAR----------LSQTLVKDVAILAQEIHDVAGDGDTLGSS------EPAHSASLSN 1332
             + A+           ++TLV++ A  + E  DV     +L S        PA+S +   
Sbjct: 1163 PQGAKSAHTLGPTPSRTETLVEETAAESSE-DDVVAPSQSLLSGYMTPGLTPANSQASKA 1221

Query: 1333 MP---STP--ASTISAREE 1346
             P   S+P  +ST++A+++
Sbjct: 1222 TPKLDSSPSVSSTLAAKDD 1240



 Score = 53.5 bits (127), Expect = 2e-06
 Identities = 156/714 (21%), Positives = 254/714 (35%), Gaps = 142/714 (19%)

Query: 658  GQK-WVSRWASLADSYSDPGLTEDGLGRRGGEPEGSLPVRMRRRLPQLPSERADSPAGPE 716
            GQK ++++  +L D Y+    T + LGR+    E +     + R+    S    S    E
Sbjct: 35   GQKCFLAQPVTLLDIYTHWQQTSE-LGRKRKAEEDAALQAKKTRVSDPISTSESSEEEEE 93

Query: 717  SSRRSGPGPPELDSEQPSRLFGQEELDPDSLSDASGSDGGRGPEPGVEPQDSRRRSPQEG 776
            +   +    P L S   S L       P S+ + + ++  +  + G     +    P  G
Sbjct: 94   AEAETAKATPRLASTNSSVLGADL---PSSMKEKAKAETEKAGKTG-----NSMPHPATG 145

Query: 777  PTWSR--GRRSPRAPGEPTPASFFIGDQNGDAVLSRKPLAAPGDGEGLGQTAQPSPPARD 834
             T +     +SPR   EP+  +  + +   +  +     AA       GQ    S     
Sbjct: 146  KTVANLLSGKSPRKSAEPSANTTLVSETEEEGSVPAFGAAAKPGMVSAGQADSSSEDTS- 204

Query: 835  GVYVSANGRMVIQLRPGRSPEPDGPAPAFLRQESFTKEPASGPPAPGKPPHISSHPLLQD 894
                S++    ++ +P   P     A +   +ES  ++ A   PAPGK   ++  P ++ 
Sbjct: 205  ----SSSDETDVEGKPSVKPA-QVKASSVSTKESPARKAA---PAPGKVGDVT--PQVKG 254

Query: 895  LA---ATRAARMDFHSQDTHLILKETETALA-------ALEARLLSNSVDAECEG----G 940
             A   A RA + +  S+ +    +  E A A       A E  L   +  A  +G    G
Sbjct: 255  GALPPAKRAKKPEEESESSEEGSESEEEAPAGTRSQVKASEKILQVRAASAPAKGTPGKG 314

Query: 941  STPRPPEDA---------------------LSGDSDVDTASTVSL----RSGKSGP--SP 973
            +TP PP  A                      S DS+ +T +  +L     SGK+    + 
Sbjct: 315  ATPAPPGKAGAVASQTKAGKPEEDSESSSEESSDSEEETPAAKALLQAKASGKTSQVGAA 374

Query: 974  TTPQPLRAQKEMSPSPPAAQDPGGTAL---------VSAREQSSERQHHPLGPTDMGRGE 1024
            + P     +K  +P+PP    P               S+ E+S   +  P      G+  
Sbjct: 375  SAPAKESPRKGAAPAPPGKTGPAVAKAQAGKREEDSQSSSEESDSEEEAPAQAKPSGKAP 434

Query: 1025 PVRRSAIRRGHRPR-GSLDWPSEERGPVLAHL----PSSDVMASNHET------------ 1067
             VR ++      PR G+   P  + GP  A +       D  +S+ E+            
Sbjct: 435  QVRAASAPAKESPRKGAAPAPPRKTGPAAAQVQVGKQEEDSRSSSEESDSDREALAAMNA 494

Query: 1068 -------------PEAT-GAGRLGSRRKPAAP----PPSPAAR----EEQSRSSASSQKG 1105
                         P +T G G LG    P  P    P +P+A+    EE S SS+     
Sbjct: 495  AQVKPLGKSPQVKPASTMGMGPLGKGAGPVPPGKVGPATPSAQVGKWEEDSESSSEES-- 552

Query: 1106 PQALTRSNSLSTPRPTRASRLRRARLGDASDTEAADGERGSLGNPEPVGRPAAEQAKKLS 1165
                  S+S     PT  +  +   LG+    +A      + G P+  G P A Q K   
Sbjct: 553  ------SDSSDGEVPTAVAPAQEKSLGNI--LQAKPTSSPAKGPPQKAG-PVAVQVKAEK 603

Query: 1166 RLDILAMPRKRAGSFTGTSDPEAAPARTSFSGRSVELCCASRKPTM--AEARAVSRKAAN 1223
             +D      + + S    +D E APA          +  A  KP +   + +A  +K   
Sbjct: 604  PMDNSESSEESSDS----ADSEEAPA---------AMTAAQAKPALKIPQTKACPKK--- 647

Query: 1224 TATTTGPRQPFSRARSGSARYTSTTQTPRAGSSSRARSRAPGPRDTDDDEEEPD 1277
            T TT   +    R  + + R   T  +P AGSS         P +     EE D
Sbjct: 648  TNTTASAKVAPVRVGTQAPRKAGTATSP-AGSSPAVAGGTQRPAEDSSSSEESD 700


>gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a [Homo
            sapiens]
          Length = 1450

 Score = 62.0 bits (149), Expect = 4e-09
 Identities = 245/1198 (20%), Positives = 409/1198 (34%), Gaps = 238/1198 (19%)

Query: 229  PTKETPQPSQPPE---VPAHEMPTKDAEAGGGGAAPVVQSHASFTIEFDDCSPGKMKIKD 285
            P+  T   S+  E   VPA     K      G A    +  +S + E D    GK  +K 
Sbjct: 163  PSANTTLVSETEEEGSVPAFGAAAKPGMVSAGQADSSSEDTSSSSDETD--VEGKPSVKP 220

Query: 286  -HITKFSLRQRRPPGKEATPGEMVSAETKVADWLVQND----PSLLHRVGPGDDRHSTKS 340
              +   S+  +  P ++A P     A  KV D   Q      P       P ++  S++ 
Sbjct: 221  AQVKASSVSTKESPARKAAP-----APGKVGDVTPQVKGGALPPAKRAKKPEEESESSEE 275

Query: 341  DLPVHTRTLKGHKHEDGTQSDSEDPLAKAASAAGVPLEAS-----GEQVRLQRQIKRDPQ 395
                      G + +           A +A A G P + +     G+   +  Q K    
Sbjct: 276  GSESEEEAPAGTRSQVKASEKILQVRAASAPAKGTPGKGATPAPPGKAGAVASQTKAGKP 335

Query: 396  ELLHNQQAFVIEFFDEDTPRKKR--------SQSFTHSPSGDPKADKRRG--PTPADRDR 445
            E      +      +E+TP  K           S   + S   K   R+G  P P  +  
Sbjct: 336  EEDSESSSEESSDSEEETPAAKALLQAKASGKTSQVGAASAPAKESPRKGAAPAPPGKTG 395

Query: 446  PSVPAPVQAGGRSSGPQRAGSLKREKTEERLGSPSPASRTPARPFGSVGRRSRLAQDFMA 505
            P+V A  QAG R    Q + S + +  EE      P+ + P                   
Sbjct: 396  PAV-AKAQAGKREEDSQ-SSSEESDSEEEAPAQAKPSGKAPQ------------------ 435

Query: 506  QCLRESSPAARPSPEKVPPVLPAPLTPHGTSPVGPPTPPPAPTDPQLTKARKQEEDDSLS 565
              +R +S  A+ SP K            G +P  P    PA    Q+    KQEED   S
Sbjct: 436  --VRAASAPAKESPRK------------GAAPAPPRKTGPAAAQVQV---GKQEEDSRSS 478

Query: 566  DAGTYTIETEAQDTEVEEARKM-IDQVFGVLESPELSRASSATFRPVIRGDRDESDDGGV 624
                    +E  D++ E    M   QV  + +SP++  AS+    P+ +G          
Sbjct: 479  --------SEESDSDREALAAMNAAQVKPLGKSPQVKPASTMGMGPLGKG---------- 520

Query: 625  AQRMALLQEFASRPLGAAPQAEHQGLPVPGSPGGQKWVSRWASLADSYSDPGLTEDGLGR 684
                           G  P     G   P +P  Q  V +W   ++S S+    E     
Sbjct: 521  --------------AGPVP----PGKVGPATPSAQ--VGKWEEDSESSSE----ESSDSS 556

Query: 685  RGGEPEGSLPVRMRRRLPQLPSERADSPA-GPESSRRSGPGPPELDSEQP---------S 734
             G  P    P + +     L ++   SPA GP   +++GP   ++ +E+P         S
Sbjct: 557  DGEVPTAVAPAQEKSLGNILQAKPTSSPAKGP--PQKAGPVAVQVKAEKPMDNSESSEES 614

Query: 735  RLFGQEELDPDSLSDASGSDGGRGPEPGVEPQDSRRRSPQEGPTWSRGRRSPRAPGEPT- 793
                  E  P +++ A      + P+    P+ +   +  +      G ++PR  G  T 
Sbjct: 615  SDSADSEEAPAAMTAAQAKPALKIPQTKACPKKTNTTASAKVAPVRVGTQAPRKAGTATS 674

Query: 794  --------------PASFFIGDQNGDAVLSRKPLA-----APGDGEGLGQTAQPSPPARD 834
                          PA      +  D+   +  LA     A   G+GL Q    S P + 
Sbjct: 675  PAGSSPAVAGGTQRPAEDSSSSEESDSEEEKTGLAVTVGQAKSVGKGL-QVKAASVPVKG 733

Query: 835  GVYVSANGRMVIQLRPGRSPEPDGPAPAFLRQES-FTKEPASGPPAPGKPPHISSHPLLQ 893
             +     G+    + PG++        A  +++S  ++E +    A   P  + +     
Sbjct: 734  SL-----GQGTAPVLPGKTGPTVTQVKAEKQEDSESSEEESDSEEAAASPAQVKTSVKKT 788

Query: 894  DLAATRAARMDFHSQDTHLILKETETALAALEARLLSNSVDAECEGGSTPRPPEDALSGD 953
               A  AA     ++ T            +   ++++ +  A+    S  +PP       
Sbjct: 789  QAKANPAAARAPSAKGT-----------ISAPGKVVTAAAQAKQRSPSKVKPPVRNPQN- 836

Query: 954  SDVDTASTVSLRSGKSGPSPTTPQPLRAQKEMSPSPPAAQDPGGTALVSAREQSSERQHH 1013
                  STV  R   S PS        AQ +  P     +D G     S  E  SE +  
Sbjct: 837  ------STVLARGPASVPSVGKAVATAAQAQTGPE----EDSGS----SEEESDSEEEAE 882

Query: 1014 PLGPT-DMGRGEPVRRSAIRRGHRPR-GSLDWPSEERGPVLAHLPSSDVMASNHETPEAT 1071
             L      G+   +R +       PR G+   P  + GP  A     D   S+ E  ++ 
Sbjct: 883  TLAQVKPSGKTHQIRAALAPAKESPRKGAAPTPPGKTGPSAAQAGKQDDSGSSSEESDSD 942

Query: 1072 GAGRLGSRRKPAAPPPSPAAREEQSRSSASSQKGPQALTRSNSLSTPRPTRASR-LRRAR 1130
            G             P  P    + +RS A     P    ++ + STPR  RAS    R+ 
Sbjct: 943  GEAPAAVTSAQVIKP--PLIFVDPNRSPAGPAATP---AQAQAASTPRKARASESTARSS 997

Query: 1131 LGDASDTEAADGERGSLGNPEPVGRPAAEQAKKLSRLDILAMPRKRAGSFTGTSDPEAAP 1190
              ++ D +                 PA +      R +++ MP         T+ P  AP
Sbjct: 998  SSESEDEDVI---------------PATQCLTPGIRTNVVTMP---------TAHPRIAP 1033

Query: 1191 ARTSFSGRSVELCCASRKPTMAEARAVSRKAANTATTTGPRQPFS-RARSGSARYTSTTQ 1249
             + S +G S     +     +++ +     A    +  G     S ++ S  A+ T+  +
Sbjct: 1034 -KASMAGAS----SSKESSRISDGKKQEGPATQVDSAVGTLPATSPQSTSVQAKGTNKLR 1088

Query: 1250 TPRAGSSSRARSRAPGPRDTDDDEEEPDPYGFIVQTAEIAEIAR----------LSQTLV 1299
             P+     +A      P  +DD E+  D      +  E  + A+           ++TLV
Sbjct: 1089 KPKLPEVQQA---TKAPESSDDSEDSSDSSSGSEEDGEGPQGAKSAHTLGPTPSRTETLV 1145

Query: 1300 KDVAILAQEIHDVAGDGDTLGSS------EPAHSASLSNMP---STP--ASTISAREE 1346
            ++ A  + E  DV     +L S        PA+S +    P   S+P  +ST++A+++
Sbjct: 1146 EETAAESSE-DDVVAPSQSLLSGYMTPGLTPANSQASKATPKLDSSPSVSSTLAAKDD 1202



 Score = 55.8 bits (133), Expect = 3e-07
 Identities = 175/928 (18%), Positives = 298/928 (32%), Gaps = 113/928 (12%)

Query: 353  KHEDGTQSDSEDPLAKAASAAGVPLEASGEQVRL-QRQIKRDPQELLHNQQAFVIEFFDE 411
            K E+ +QS SE+  ++  + A         QVR      K  P++               
Sbjct: 405  KREEDSQSSSEESDSEEEAPAQAKPSGKAPQVRAASAPAKESPRKGA------------A 452

Query: 412  DTPRKKRSQSFTHSPSGDPKADKRRGPTPADRDRPSVPA----PVQAGGRSSGPQRAGSL 467
              P +K   +      G  + D R     +D DR ++ A     V+  G+S   + A ++
Sbjct: 453  PAPPRKTGPAAAQVQVGKQEEDSRSSSEESDSDREALAAMNAAQVKPLGKSPQVKPASTM 512

Query: 468  KREKTEERLGSPSPASRTPARPFGSVGRRSRLAQDFMAQCLRESS----PAARPSPEKV- 522
                  +  G   P    PA P   VG+    ++    +    S      A  P+ EK  
Sbjct: 513  GMGPLGKGAGPVPPGKVGPATPSAQVGKWEEDSESSSEESSDSSDGEVPTAVAPAQEKSL 572

Query: 523  -------PPVLPAPLTPHGTSPVGPPTPPPAPTDPQLTKARKQEEDDSLSDAGTYTI--- 572
                   P   PA   P    PV        P D   +     +  DS       T    
Sbjct: 573  GNILQAKPTSSPAKGPPQKAGPVAVQVKAEKPMDNSESSEESSDSADSEEAPAAMTAAQA 632

Query: 573  -------ETEA--QDTEVEEARKMIDQVFGVLESPELSRASS----------ATFRPVIR 613
                   +T+A  + T    + K+     G     +   A+S           T RP   
Sbjct: 633  KPALKIPQTKACPKKTNTTASAKVAPVRVGTQAPRKAGTATSPAGSSPAVAGGTQRPAED 692

Query: 614  GDRDESDDGGVAQRMALLQEFASRPLGAAPQAEHQGLPVPGSPG--------GQKWVSRW 665
                E  D    +    +    ++ +G   Q +   +PV GS G        G+   +  
Sbjct: 693  SSSSEESDSEEEKTGLAVTVGQAKSVGKGLQVKAASVPVKGSLGQGTAPVLPGKTGPTVT 752

Query: 666  ASLADSYSDPGLTEDGLGRRGGEPEGSLPVRMRRRLPQLPSERADSPAGPESSRR--SGP 723
               A+   D   +E+       E   + P +++  + +  ++   + A   S++   S P
Sbjct: 753  QVKAEKQEDSESSEE---ESDSEEAAASPAQVKTSVKKTQAKANPAAARAPSAKGTISAP 809

Query: 724  GPPELDSEQPSRLFGQEELDPDSLSDASGSDGGRGPE--PGVEPQDSRRRSPQEGPTWSR 781
            G     + Q  +     ++ P   +  + +   RGP   P V    +     Q GP    
Sbjct: 810  GKVVTAAAQAKQR-SPSKVKPPVRNPQNSTVLARGPASVPSVGKAVATAAQAQTGPEEDS 868

Query: 782  GRRSPRAPGEPTPASFFIGDQNGDAVLSRKPLAAPGDGEGLGQTAQPSPPARDGVYVSAN 841
            G     +  E    +      +G     R  LA   +    G  A P+PP + G   +  
Sbjct: 869  GSSEEESDSEEEAETLAQVKPSGKTHQIRAALAPAKESPRKG--AAPTPPGKTGPSAAQA 926

Query: 842  GRMVIQLRPGRSPEPDGPAPAFLRQESFTKEPASGPPAPGKPPHISSHPLLQDLAAT-RA 900
            G+           + DG APA +      K P         P   ++ P     A+T R 
Sbjct: 927  GKQDDSGSSSEESDSDGEAPAAVTSAQVIKPPLIFVDPNRSPAGPAATPAQAQAASTPRK 986

Query: 901  ARMDFHSQDTHLILKETETALAALEARLLSNSVDAECEGGSTPR-PPEDALSGDSDVDTA 959
            AR    +  +     E E  + A +        +      + PR  P+ +++G S    +
Sbjct: 987  ARASESTARSSSSESEDEDVIPATQCLTPGIRTNVVTMPTAHPRIAPKASMAGASSSKES 1046

Query: 960  STVSLRSGKSGPS-----------PTTPQPLRAQ-----KEMSPSPPAAQDPGGTALVSA 1003
            S +S    + GP+            T+PQ    Q     K   P  P  Q    T    +
Sbjct: 1047 SRISDGKKQEGPATQVDSAVGTLPATSPQSTSVQAKGTNKLRKPKLPEVQQ--ATKAPES 1104

Query: 1004 REQSSERQHHPLGPTDMGRGEPVRRSAIRRGHRPRGSLDWPSEERGPVLAHLPSSDVMA- 1062
             + S +      G  + G G    +SA   G  P  +     E      A     DV+A 
Sbjct: 1105 SDDSEDSSDSSSGSEEDGEGPQGAKSAHTLGPTPSRTETLVEE----TAAESSEDDVVAP 1160

Query: 1063 -----SNHETPEATGAGRLGSRRKP-----------AAPPPSPAAREEQSRSSASSQKGP 1106
                 S + TP  T A    S+  P            A    P  ++E     A+    P
Sbjct: 1161 SQSLLSGYMTPGLTPANSQASKATPKLDSSPSVSSTLAAKDDPDGKQEAKPQQAAGMLSP 1220

Query: 1107 QALTRSNSLSTPRPTRASRLRRARLGDASDTEAADGE--RGSLGNPEPVGRPAAEQAKKL 1164
            +   +  +  T  P ++ + ++      + T A      +  LG P P+     + +   
Sbjct: 1221 KTGGKEAASGT-TPQKSRKPKKGAGNPQASTLALQSNITQCLLGQPWPLNEAQVQASVVK 1279

Query: 1165 SRLDILAMPRKRAGSFTGTSDPEAAPAR 1192
               ++L   RK+    T  S  +   +R
Sbjct: 1280 VLTELLEQERKKVVDTTKESSRKGWESR 1307



 Score = 53.5 bits (127), Expect = 2e-06
 Identities = 156/714 (21%), Positives = 254/714 (35%), Gaps = 142/714 (19%)

Query: 658  GQK-WVSRWASLADSYSDPGLTEDGLGRRGGEPEGSLPVRMRRRLPQLPSERADSPAGPE 716
            GQK ++++  +L D Y+    T + LGR+    E +     + R+    S    S    E
Sbjct: 35   GQKCFLAQPVTLLDIYTHWQQTSE-LGRKRKAEEDAALQAKKTRVSDPISTSESSEEEEE 93

Query: 717  SSRRSGPGPPELDSEQPSRLFGQEELDPDSLSDASGSDGGRGPEPGVEPQDSRRRSPQEG 776
            +   +    P L S   S L       P S+ + + ++  +  + G     +    P  G
Sbjct: 94   AEAETAKATPRLASTNSSVLGADL---PSSMKEKAKAETEKAGKTG-----NSMPHPATG 145

Query: 777  PTWSR--GRRSPRAPGEPTPASFFIGDQNGDAVLSRKPLAAPGDGEGLGQTAQPSPPARD 834
             T +     +SPR   EP+  +  + +   +  +     AA       GQ    S     
Sbjct: 146  KTVANLLSGKSPRKSAEPSANTTLVSETEEEGSVPAFGAAAKPGMVSAGQADSSSEDTS- 204

Query: 835  GVYVSANGRMVIQLRPGRSPEPDGPAPAFLRQESFTKEPASGPPAPGKPPHISSHPLLQD 894
                S++    ++ +P   P     A +   +ES  ++ A   PAPGK   ++  P ++ 
Sbjct: 205  ----SSSDETDVEGKPSVKPA-QVKASSVSTKESPARKAA---PAPGKVGDVT--PQVKG 254

Query: 895  LA---ATRAARMDFHSQDTHLILKETETALA-------ALEARLLSNSVDAECEG----G 940
             A   A RA + +  S+ +    +  E A A       A E  L   +  A  +G    G
Sbjct: 255  GALPPAKRAKKPEEESESSEEGSESEEEAPAGTRSQVKASEKILQVRAASAPAKGTPGKG 314

Query: 941  STPRPPEDA---------------------LSGDSDVDTASTVSL----RSGKSGP--SP 973
            +TP PP  A                      S DS+ +T +  +L     SGK+    + 
Sbjct: 315  ATPAPPGKAGAVASQTKAGKPEEDSESSSEESSDSEEETPAAKALLQAKASGKTSQVGAA 374

Query: 974  TTPQPLRAQKEMSPSPPAAQDPGGTAL---------VSAREQSSERQHHPLGPTDMGRGE 1024
            + P     +K  +P+PP    P               S+ E+S   +  P      G+  
Sbjct: 375  SAPAKESPRKGAAPAPPGKTGPAVAKAQAGKREEDSQSSSEESDSEEEAPAQAKPSGKAP 434

Query: 1025 PVRRSAIRRGHRPR-GSLDWPSEERGPVLAHL----PSSDVMASNHET------------ 1067
             VR ++      PR G+   P  + GP  A +       D  +S+ E+            
Sbjct: 435  QVRAASAPAKESPRKGAAPAPPRKTGPAAAQVQVGKQEEDSRSSSEESDSDREALAAMNA 494

Query: 1068 -------------PEAT-GAGRLGSRRKPAAP----PPSPAAR----EEQSRSSASSQKG 1105
                         P +T G G LG    P  P    P +P+A+    EE S SS+     
Sbjct: 495  AQVKPLGKSPQVKPASTMGMGPLGKGAGPVPPGKVGPATPSAQVGKWEEDSESSSEES-- 552

Query: 1106 PQALTRSNSLSTPRPTRASRLRRARLGDASDTEAADGERGSLGNPEPVGRPAAEQAKKLS 1165
                  S+S     PT  +  +   LG+    +A      + G P+  G P A Q K   
Sbjct: 553  ------SDSSDGEVPTAVAPAQEKSLGNI--LQAKPTSSPAKGPPQKAG-PVAVQVKAEK 603

Query: 1166 RLDILAMPRKRAGSFTGTSDPEAAPARTSFSGRSVELCCASRKPTM--AEARAVSRKAAN 1223
             +D      + + S    +D E APA          +  A  KP +   + +A  +K   
Sbjct: 604  PMDNSESSEESSDS----ADSEEAPA---------AMTAAQAKPALKIPQTKACPKK--- 647

Query: 1224 TATTTGPRQPFSRARSGSARYTSTTQTPRAGSSSRARSRAPGPRDTDDDEEEPD 1277
            T TT   +    R  + + R   T  +P AGSS         P +     EE D
Sbjct: 648  TNTTASAKVAPVRVGTQAPRKAGTATSP-AGSSPAVAGGTQRPAEDSSSSEESD 700


>gi|166706868 synaptopodin 2-like isoform a [Homo sapiens]
          Length = 977

 Score = 61.6 bits (148), Expect = 6e-09
 Identities = 180/758 (23%), Positives = 257/758 (33%), Gaps = 120/758 (15%)

Query: 430  PKADKRRGPTPADRDRPSVPAPVQAGGRSSGPQRAGSLKREKTEERLGSPSPASRTPARP 489
            P ++   G T +D D P+     +   R  GP R         E  L S SPA   P  P
Sbjct: 132  PDSEAYYGETDSDADGPATQEKPRRP-RRRGPTRPTPPGAPPDEVYL-SDSPAEPAPTIP 189

Query: 490  FGSVGRRSRLAQDFMAQCLRESSPAARPSPEKVPPVLPAPLTPHGTSPVGP-------PT 542
                   SR+           SSP+        PP   A L PHG    GP       P 
Sbjct: 190  GPPSQGDSRV-----------SSPSWEDGAALQPPPAEALLLPHGPLRPGPHLIPMVGPV 238

Query: 543  PPPAPTDPQLTKARKQEEDDSLSDAGTYTIETEAQDTEVEEARKMIDQVFGVLESPELSR 602
            P P   D   T  +K ++      A     E+  Q+  ++EA+     +  +L +     
Sbjct: 239  PHPVAEDLTTTYTQKAKQ------AKLQRAES-LQEKSIKEAKTKCRTIASLLTAAPNPH 291

Query: 603  ASSATF--RPVIRGDRDESDDGGVAQRMALLQEFASRPLGAAPQAEHQGLPVPGSPGGQK 660
            +       +   R  +      G A      +E    P   +   E              
Sbjct: 292  SKGVLMFKKRRQRAKKYTLVSFGAAAGTGAEEEDGVPPTSESELDEEAFSDARSLTNQSD 351

Query: 661  WVSRWASLADSYSDPGLTE---DGLGRRGGEPEG---SLPVRMRRRLPQLPSERAD-SPA 713
            W S +  +  + +    +E    GLG +  E  G    L  + R+R      E A   PA
Sbjct: 352  WDSPYLDMELARAGSRASEGQGSGLGGQLSEVSGRGVQLFEQQRQRADSSTQELARVEPA 411

Query: 714  ------GPESSRRSGPGPPELDSEQPSRLFGQEELDPDSLSDASGSDGGRG---PEPGVE 764
                  G +S  R+   PPE     PS L       P  ++       G G   P P + 
Sbjct: 412  AMLNGEGLQSPPRAQSAPPEAAVLPPSPL-------PAPVASPRPFQPGGGAPTPAPSIF 464

Query: 765  PQDSRRRSP---QEGPTWSRGRRSPRAPGEPTPASFFIGDQNGDAVLSRKPLAAPGDGEG 821
             + +R  +P    + PT +     P AP     +   +       + S+ P   P    G
Sbjct: 465  NRSARPFTPGLQGQRPTTTSVIFRPLAPKRANDSLGGLSPAPPPFLSSQGPTPLPSFTSG 524

Query: 822  LGQTA----QPSPPARDG-------VYVSANGRMVIQLRPGRSPEPDGPAPAF------- 863
            +   A     PS P   G       +Y+ A  R V    PG +PEP  P  A        
Sbjct: 525  VPSHAPVSGSPSTPRSSGPVTATSSLYIPAPSRPV---TPGGAPEPPAPPSAAAMTSTAS 581

Query: 864  ------LRQESFTKEPASGPPAPGKPPHISSHPLLQDLAAT----RAARMDFHSQDTHLI 913
                  LR  +  + PA GP AP +PP      +    A T     A R     Q     
Sbjct: 582  IFLSAPLRPSARPEAPAPGPGAP-EPPSAREQRISVPAARTGILQEARRRGTRKQMFRPG 640

Query: 914  LKETETALAALEARLLSNSVDAECEGGSTPRPPEDALS-GDSDVDTASTVSLRSGKSGP- 971
             +ET+ +       L+ N  +    GG+   P EDALS G    +    V  RS K+ P 
Sbjct: 641  KEETKNSPNPELLSLVQNLDEKPRAGGAESGPEEDALSLGAEACNFMQPVGARSYKTLPH 700

Query: 972  -SPTTPQPL--RAQKEMSPS--PPAAQDPGGTALVSAR-EQSSERQHHPLGPTDMGRGEP 1025
             +P TP P+  +    M+P   PP A  P    L+      ++     P  P   GRG  
Sbjct: 701  VTPKTPPPMAPKTPPPMTPKTPPPVAPKPPSRGLLDGLVNGAASSAGIPEPPRLQGRGGE 760

Query: 1026 V---RRSAIRR-----------GHRPRGSLDWPSEERGPVLAHLPSSDVMASNHETPEAT 1071
            +   R+S   R           G RPR     PS         LP S   + N   P   
Sbjct: 761  LFAKRQSRADRYVVEGTPGPGLGPRPRSPSPTPS---------LPPSWKYSPNIRAPPPI 811

Query: 1072 GAGRLGSRRKPAAPPPSPAAREEQSRSSASSQKGPQAL 1109
                L S   P A    P A+ +  R  A+ ++G +AL
Sbjct: 812  AYNPLLSPFFPQAARTLPKAQSQGPR--ATPKQGIKAL 847



 Score = 35.8 bits (81), Expect = 0.33
 Identities = 35/119 (29%), Positives = 44/119 (36%), Gaps = 10/119 (8%)

Query: 416 KKRSQSFTHSPSGDPKADKRRGPTPADRDRPSVPAPVQAGG-----RSSGPQRAGSLKRE 470
           K+ + S        P     +GPTP       VP+     G     RSSGP  A S    
Sbjct: 493 KRANDSLGGLSPAPPPFLSSQGPTPLPSFTSGVPSHAPVSGSPSTPRSSGPVTATSSLYI 552

Query: 471 KTEERLGSPSPASRTPARPFGSVGRRSRLAQDFMAQCLRESSPAARPSPEKVPPVLPAP 529
               R  +P  A   PA P  S    +  A  F++  LR   P+ARP      P  P P
Sbjct: 553 PAPSRPVTPGGAPEPPAPP--SAAAMTSTASIFLSAPLR---PSARPEAPAPGPGAPEP 606



 Score = 33.9 bits (76), Expect = 1.3
 Identities = 35/140 (25%), Positives = 47/140 (33%), Gaps = 15/140 (10%)

Query: 426 PSGDPKADKRR--GPTPADRDRPSVPAPVQAGGRSSGPQRAGSLK---REKTEERLGSPS 480
           PS  P+A       P P       +  P    G     +R G+ K   R   EE   SP+
Sbjct: 590 PSARPEAPAPGPGAPEPPSAREQRISVPAARTGILQEARRRGTRKQMFRPGKEETKNSPN 649

Query: 481 PASRT-------PARPFGSVGRRSRLAQDFMAQCLRESSPAARPSPEKVP---PVLPAPL 530
           P   +         R  G+       A    A+      P    S + +P   P  P P+
Sbjct: 650 PELLSLVQNLDEKPRAGGAESGPEEDALSLGAEACNFMQPVGARSYKTLPHVTPKTPPPM 709

Query: 531 TPHGTSPVGPPTPPPAPTDP 550
            P    P+ P TPPP    P
Sbjct: 710 APKTPPPMTPKTPPPVAPKP 729


>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
          Length = 904

 Score = 60.8 bits (146), Expect = 1e-08
 Identities = 117/518 (22%), Positives = 174/518 (33%), Gaps = 100/518 (19%)

Query: 415 RKKRSQSFTHSPSGDPKADKRRGPTPADRDRPSVPAPVQAGGRSSGPQRAGSLKREKTEE 474
           R+ RS+S ++SP   P    RR P+P  R  P    P     RS  P R    +R  +  
Sbjct: 300 RRHRSRSRSYSPRRRPSP--RRRPSPRRRTPPRRMPPPPRHRRSRSPVRR---RRRSSAS 354

Query: 475 RLGSPSPASRTPARPFGSVGRRSRLAQDFMAQCLRESSPAARPSPEK---VPPVLPAPLT 531
             GS S +S + +R   S  ++         +  R  SP+A P   +    PP  P P T
Sbjct: 355 LSGSSSSSSSSRSR---SPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKT 411

Query: 532 PHGTSPV-------GPPTPPPAPTDPQLTKARKQEEDDSLSDAGTYTIETEAQDTEVEEA 584
            H  +P           +  P  T  ++TK +  E+ +S S A     + E  ++E ++ 
Sbjct: 412 RHSPTPQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPR-KVELSESEEDKG 470

Query: 585 RKMI--DQV-----FGVLESPELSRASSATFRPVIRGDRDESDDGGVAQRMALLQEFASR 637
            KM   D V     +        S + S++     R  R    +G V +R       ++ 
Sbjct: 471 GKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSAS 530

Query: 638 PLG-----------------AAPQAEHQGLPVPGSPGGQKWVSRWASLADSYSDPGLTED 680
           P                   + P    +  P P  P  ++          + S P     
Sbjct: 531 PSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPR--- 587

Query: 681 GLGRRGGEPEGSLPVRMRRRLPQLPSERADSPAGPESSRRSGPGPP-------ELDSEQP 733
              RR   P    P   RR  P  P +R  +   P   RR+ P PP           +Q 
Sbjct: 588 ---RRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQR 644

Query: 734 SRLFGQEELDPDSLSDASGSDGGRGPEPGVEPQDSRRRSPQEGPTWSRGRRSPRAPGEPT 793
           S    +      S     GS   R       PQ ++R SP   P      R+P+    P 
Sbjct: 645 SSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRP------RAPQTSSSPP 698

Query: 794 PASFFIGDQNGDAVLSRKPLAAPGDGEGLGQTAQPSPPARDGVYVSANGRMVIQLRPGRS 853
           P                      G      +   PSP  R    VS            R+
Sbjct: 699 P-------------------VRRGASSSPQRRQSPSPSTRPIRRVS------------RT 727

Query: 854 PEPD------GPAPAFLRQESFTKEPASGP-PAPGKPP 884
           PEP        P+P  +R+ S ++  +  P PA  KPP
Sbjct: 728 PEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPP 765



 Score = 55.8 bits (133), Expect = 3e-07
 Identities = 134/617 (21%), Positives = 208/617 (33%), Gaps = 132/617 (21%)

Query: 432  ADKRRGPTPADRDRPSVPAPVQAGGRSSGPQ--RAGSLKREKTEERLGSPSPASRTPARP 489
            +D  + P P     P  P+P +   +    +  R  S  R K+  R  S SP+   P R 
Sbjct: 242  SDILKVPKPEPIPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRR 301

Query: 490  FGSVGRRSRLAQDFMAQCLRESSPAARPSPEKVPPVLPAPLTPHGTSPVGPPTPPPAPTD 549
                  RSR          R  SP  RPSP + P       +P   +P     PPP    
Sbjct: 302  -----HRSRS---------RSYSPRRRPSPRRRP-------SPRRRTPPRRMPPPPRHRR 340

Query: 550  PQLTKARKQEEDDSLSDAGTYTIETEAQDTEVEEARKMIDQVFGVLESPELSRASSATFR 609
             +    R++    SLS + + +  + ++    +  ++           P  +R  S +  
Sbjct: 341  SRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKR-------TSSPPRKTRRLSPSAS 393

Query: 610  PVIRGDRDE-----------SDDGGVAQRMALLQEFASRPLGAAPQAEHQGLPVPGSPGG 658
            P  R  R             S     + R    +   S    +    +H+G     SP  
Sbjct: 394  PPRRRHRPSPPATPPPKTRHSPTPQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSP 453

Query: 659  QKWVSRWASLADSYSDPGLTEDGLGRRGGEPEGSLPVRMRRRLPQLPSERADSPAGPESS 718
                 R   L++S  D          +GG+   +  V+ RR+  +  ++++ S +G  SS
Sbjct: 454  AP-KPRKVELSESEED----------KGGKMAAADSVQQRRQYRR-QNQQSSSDSGSSSS 501

Query: 719  RRSGPGPPELDSEQPSRLF---GQEELDPDSLSDASGSDGGRGPEPGVEPQDSRRRSPQE 775
                      + E+P R     G+           S S   R  +    P+  RRRSP  
Sbjct: 502  S---------EDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRGRRRRSPSP 552

Query: 776  GPTWSRGRRSPRAPGEPTPASFFIGDQNGDAVLSRKPLAAPGDGEGLGQTAQPSPPARDG 835
             PT  R RRSP +P  P                 R P   P       +   PSPP R  
Sbjct: 553  PPT--RRRRSP-SPAPPPRR-------------RRTPTPPP-------RRRTPSPPPR-- 587

Query: 836  VYVSANGRMVIQLRPGRSPEPDGPAPAFLRQESFTKEP----ASGPP------APGKPP- 884
                            RSP P   +P   R+ S +  P    AS PP      +P  PP 
Sbjct: 588  ---------------RRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPK 632

Query: 885  -HISSHPLLQDLAATRAARMDFHSQDTHLILKETETALAALEARLLSNSVDAECEGGSTP 943
              +S  P  +  ++    R        H   K +  + +  EAR    S         +P
Sbjct: 633  RRVSHSPPPKQRSSPVTKRRSPSLSSKH--RKGSSPSRSTREAR----SPQPNKRHSPSP 686

Query: 944  RPPEDALSGDSDVDTASTVSLRSGKSGPSPT---------TPQPLRAQKEMSPSPPAAQD 994
            RP     S           S    +  PSP+         TP+P + +K  SPSP + + 
Sbjct: 687  RPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRR 746

Query: 995  PGGTALVSAREQSSERQ 1011
               +  VS   + + ++
Sbjct: 747  VSSSRSVSGSPEPAAKK 763



 Score = 55.1 bits (131), Expect = 5e-07
 Identities = 133/618 (21%), Positives = 206/618 (33%), Gaps = 112/618 (18%)

Query: 100 RVQHRVPEEALKHEKYTSQL-QVSVKGLAPKRSEA--------LPEHTPYCEASNPRPEK 150
           R + R P  A + ++ T +L + SVK   P   EA        +P+  P  E   P PEK
Sbjct: 204 RTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQEATSTSDILKVPKPEPIPEPKEPSPEK 263

Query: 151 GDRRPGTEAASYRTPLYGQPSWWGEDDGSTLPDAQRQGEPYPERPKGPVQQDGELHGFRA 210
             ++   E    +T    +         S      R   P   RP+   +     +  R 
Sbjct: 264 NSKK---EKEKEKTRPRSRSR-------SKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRR 313

Query: 211 PAEPQGCSFRREPSYFEIPTKETPQPSQPPEVPAHEMPTKDAEAGGGGAAPVVQSHASFT 270
              P     RR PS    P + TP    PP  P H             +A +  S +S +
Sbjct: 314 RPSP-----RRRPS----PRRRTPPRRMPPP-PRHRRSRSPVRRRRRSSASLSGSSSSSS 363

Query: 271 IEFDDCSPGKMKIKDHITKFSLRQRRPPGKEATPGEMVSAETKVADWLVQNDPSLLHRVG 330
                  P K   +   T    R+ R     A+P       +  A       P   H   
Sbjct: 364 SSRSRSPPKKPPKR---TSSPPRKTRRLSPSASPPRRRHRPSPPAT----PPPKTRHSPT 416

Query: 331 PGDDRHSTKSDLPVHTRTLKGH--KHEDGTQSDSEDPLAKAASAAGVPLE-------ASG 381
           P     + KS + V      G   KH+   + +S  P  K         E       A+ 
Sbjct: 417 PQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAA 476

Query: 382 EQVRLQRQIKRDPQELLHNQQAFVIEFFDEDTP------------RKKRSQSFTHSPSG- 428
           + V+ +RQ +R  Q+   +  +      +++ P            R++ S S + SPS  
Sbjct: 477 DSVQQRRQYRRQNQQ--SSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPR 534

Query: 429 ------DPKADKRRGPTPADRDRPSVPAPVQAGGRSSGPQRAGSLKREKTEERLGSPSPA 482
                  P+  +RR P+P    R   P+P      +  P+R           R  +P P 
Sbjct: 535 KRQKETSPRGRRRRSPSPPPTRRRRSPSP------APPPRR----------RRTPTPPPR 578

Query: 483 SRTPARPFGSVGRRSRLAQDFMAQCLRESSPAARPSPEKVPPVLPAPLTPHGTSPVGPP- 541
            RTP+ P     RRS   + +     R  SP+    P K     P P      SP  PP 
Sbjct: 579 RRTPSPP---PRRRSPSPRRYSPPIQRRYSPS---PPPKRRTASPPPPPKRRASPSPPPK 632

Query: 542 -----TPPPAPTDPQLTKAR------KQEEDDSLSDAGTYTIETEAQDTEVEEARKMIDQ 590
                +PPP      +TK R      K  +  S S +       +         R    Q
Sbjct: 633 RRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQ 692

Query: 591 VF--------GVLESPELSRASSATFRPVIRGDR----DESDDGGVAQRMALLQEFASRP 638
                     G   SP+  ++ S + RP+ R  R     +          ++ +  +SR 
Sbjct: 693 TSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRS 752

Query: 639 LGAAPQAEHQGLPVPGSP 656
           +  +P+   +  P P SP
Sbjct: 753 VSGSPEPAAKKPPAPPSP 770



 Score = 49.3 bits (116), Expect = 3e-05
 Identities = 80/308 (25%), Positives = 107/308 (34%), Gaps = 33/308 (10%)

Query: 1004 REQS-SERQHHPLGPTDMGRGEPVRRSAIRRG-----HRPRGSLDWPSEERGPVLAHLPS 1057
            RE+S S R+     P+   R  PVRR   R       HR +     P+ E+      LP 
Sbjct: 166  RERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPE 225

Query: 1058 SDVMASNHETPEATGAGRLGSRRKPAA-PPPSPAAREEQSRSSASSQKGPQALTRSNSLS 1116
              V        EAT    +    KP   P P   + E+ S+     +K  +  +RS S S
Sbjct: 226  PSVKVKEPSVQEATSTSDILKVPKPEPIPEPKEPSPEKNSKKEKEKEK-TRPRSRSRSKS 284

Query: 1117 -------TPRPTRASRLRRARLGDASD-TEAADGERGSLGNPEPVGRPAAEQAKKLSRLD 1168
                   +P  TR  R  R+R    S     +   R S     P  R       + SR  
Sbjct: 285  RSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSP 344

Query: 1169 ILAMPRKRAGSFTGTSD----------PEAAPARTSFSGRSVELCCASRKPTMAEARAVS 1218
            +    R+ + S +G+S           P+  P RTS   R       S  P     R   
Sbjct: 345  V-RRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSP 403

Query: 1219 RKAANTATTTGPR-QPFSRAR----SGSARYTSTTQTPRAGSSSR-ARSRAPGPRDTDDD 1272
                   T   P  Q  +R R    S S   TS   T   G+  R + S AP PR  +  
Sbjct: 404  PATPPPKTRHSPTPQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELS 463

Query: 1273 EEEPDPYG 1280
            E E D  G
Sbjct: 464  ESEEDKGG 471



 Score = 49.3 bits (116), Expect = 3e-05
 Identities = 90/423 (21%), Positives = 142/423 (33%), Gaps = 60/423 (14%)

Query: 958  TASTVSLRSGKSGPSPTTPQPLRAQKEMSPSPPAAQDPGG--TALVSAREQSSERQHHPL 1015
            T+  V+   G       +P P   + E+S S    +D GG   A  S +++   R+ +  
Sbjct: 435  TSGKVTKHKGTEKRESPSPAPKPRKVELSESE---EDKGGKMAAADSVQQRRQYRRQNQQ 491

Query: 1016 GPTDMGRGEPVRRSAIRRGHRPRGSLDWPSEERGPVLAHLPSSDVMASNHETPEATGAGR 1075
              +D G          +R H   G       E G    H PS     S  +  + T    
Sbjct: 492  SSSDSGSSSSSEDERPKRSHVKNG-------EVGRRRRHSPSRSASPSPRKRQKETSPR- 543

Query: 1076 LGSRRKPAAPPPSPAAREEQSRSSASSQKGPQALTRSNSLSTPRPTRASRLRRARLGDAS 1135
             G RR+  +PPP+   R          ++ P    R  + S P   R+   RR       
Sbjct: 544  -GRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRR------- 595

Query: 1136 DTEAADGERGSLGNPEPVGRPAAEQAKKLSRLDILAMPRKRAGSFTGTSDPEAAPARTSF 1195
               +   +R    +P P  R A+       R      P++R       S P    +    
Sbjct: 596  --YSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSH----SPPPKQRSSPVT 649

Query: 1196 SGRSVELCCASRKPTMAEARAVSRKAANTATTTGPRQPFSRARSGSARYTSTTQTP--RA 1253
              RS  L    RK +         ++   A +  P +  S +    A  TS++  P  R 
Sbjct: 650  KRRSPSLSSKHRKGSSPS------RSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRRG 703

Query: 1254 GSSSRARSRAPGPRDTDDDEEEPDPYGFIVQTAEIAEIARLSQ--TLVKDVAILAQEIHD 1311
             SSS  R ++P P                  T  I  ++R  +   + K  +   Q +  
Sbjct: 704  ASSSPQRRQSPSP-----------------STRPIRRVSRTPEPKKIKKAASPSPQSVRR 746

Query: 1312 VAGDGDTLGSSEPAHSASLSNMPSTPASTISAREELVQRIPEASLNFQKVP-PGSLNSRD 1370
            V+      GS EPA     +  P  P S + ++       P   +   K P P     R+
Sbjct: 747  VSSSRSVSGSPEPA-----AKKPPAPPSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPPRN 801

Query: 1371 FDQ 1373
             DQ
Sbjct: 802  SDQ 804



 Score = 46.2 bits (108), Expect = 2e-04
 Identities = 142/629 (22%), Positives = 206/629 (32%), Gaps = 75/629 (11%)

Query: 596  ESPELSRASSATFRPVIRGDRDESDDGGVAQRMALLQEFASRPLGAAPQAEHQGLPVPGS 655
            ++PEL   S     P ++     SD   V +   + +     P   + + + +    P S
Sbjct: 219  KTPELPEPSVKVKEPSVQEATSTSDILKVPKPEPIPEPKEPSPEKNSKKEKEKEKTRPRS 278

Query: 656  PGGQKWVSRWASLADSYSDPGLTEDGLGRRGGEPEGSLPVRMRRRLPQLPSERADSPAGP 715
                K  SR  S + S++ P        RR      S   R R    + PS R  +P   
Sbjct: 279  RSRSKSRSRTRSRSPSHTRPR-------RRHRSRSRSYSPRRRPSPRRRPSPRRRTPP-- 329

Query: 716  ESSRRSGPGPPELDSEQPSRLFGQEELDPDSLSDASGSDGGRGP------EPGVEPQDSR 769
               RR  P P    S  P R   +        S +S S   R P           P+ +R
Sbjct: 330  ---RRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTR 386

Query: 770  RRSPQEGPTWSRGRRSPRAPGEPTPASFFIGDQNGDAVLSRKPLAAPG-------DGEGL 822
            R SP   P   R R SP A   P         Q+     SR  + +PG         +G 
Sbjct: 387  RLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQSNRTRKSRVSV-SPGRTSGKVTKHKGT 445

Query: 823  GQTAQPSP-PARDGVYVSANGRMVIQLRPGRSPEPDG-PAPAFLRQESFTKEPASGPPAP 880
             +   PSP P    V +S +     + + G+    D        R+++      SG  + 
Sbjct: 446  EKRESPSPAPKPRKVELSESE----EDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSS 501

Query: 881  GKPPHISSHPLLQDLAATRAARMDFHSQDTHLILKETETALAALEARLLSNSVDAECEGG 940
             +        +       R       S       ++ ET+      R  S          
Sbjct: 502  SEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSP 561

Query: 941  STPRPPEDALSGDSDVDTASTVSLRSGKSGPSPTTPQPLRAQKEMSPSPP-----AAQDP 995
            S P PP       +      T S    +  PSP    P   Q+  SPSPP     A+  P
Sbjct: 562  S-PAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSP-PIQRRYSPSPPPKRRTASPPP 619

Query: 996  GGTALVSAREQSSERQHHPLGPTDMGRGEPV--RRSAIRRGHRPRGSLDWPSEERGPVLA 1053
                  S       R  H   P    R  PV  RRS        +GS    S  R    A
Sbjct: 620  PPKRRASPSPPPKRRVSH--SPPPKQRSSPVTKRRSPSLSSKHRKGS----SPSRSTREA 673

Query: 1054 HLPSSDVMASNHETPEATGAGRLGSRRKPAAPPP--SPAAREEQSRSSASSQKGP-QALT 1110
              P  +   S    P A         +  ++PPP    A+   Q R S S    P + ++
Sbjct: 674  RSPQPNKRHSPSPRPRAP--------QTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVS 725

Query: 1111 RSNSLSTPRPTRASRLRRARLGDASDTEAADGERGSLGNPEPVGR-----PAAEQAKKLS 1165
            R     TP P    ++++A              R   G+PEP  +     P+  Q++  S
Sbjct: 726  R-----TPEP---KKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAPPSPVQSQSPS 777

Query: 1166 RLDILAMPRKRAGSFTGTSDPEAAPARTS 1194
                 A+P K+A S T    P  +P R S
Sbjct: 778  TNWSPAVPVKKAKSPT----PSPSPPRNS 802



 Score = 43.1 bits (100), Expect = 0.002
 Identities = 93/465 (20%), Positives = 158/465 (33%), Gaps = 56/465 (12%)

Query: 129 KRSEALPEHTPY-CEASNPRPEKGDRRPGTEAASYRTPLYGQPSWWGEDDGSTLPDAQRQ 187
           KR    P   P   E S    +KG +    ++   R     Q      D GS+       
Sbjct: 447 KRESPSPAPKPRKVELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSED-- 504

Query: 188 GEPYPERPKGPVQQDGELHGFRAPAEPQGCS---------------FRREPSYFEIPTKE 232
                ERPK    ++GE+   R  +  +  S                RR PS      + 
Sbjct: 505 -----ERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRR 559

Query: 233 TPQPSQPPEVPAHEMPTKDAEAGGGGAAPVVQSHAS------FTIEFDDCSPGKMKIKDH 286
           +P P+ PP       PT           P  +S +           +    P K +    
Sbjct: 560 SPSPAPPPR--RRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASP 617

Query: 287 ITKFSLRQRRPPGKEATPGEMVSAETKVADWLVQNDPSLL--HRVGPGDDRHSTKSDLPV 344
                 R    P  +         + + +    +  PSL   HR G    R + ++  P 
Sbjct: 618 PPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQ 677

Query: 345 HTRTLKGHKHEDGTQ-SDSEDPLAKAASAAGVPLEASGEQVRLQRQIKRDPQELLHNQQA 403
             +           Q S S  P+ + AS++    ++     R  R++ R P+     + A
Sbjct: 678 PNKRHSPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAA 737

Query: 404 FVIEFFDEDTPRKKRSQSFTHSPSGDPKADKRRGPTPADRDRPSVPAPVQAGGRSSGPQR 463
                    +P+  R  S + S SG P+        PA +  P+ P+PVQ+   S+    
Sbjct: 738 -------SPSPQSVRRVSSSRSVSGSPE--------PAAKKPPAPPSPVQSQSPSTNWSP 782

Query: 464 AGSLKREKTEERLGSPSPASRTPARPFGSVGRRSRLAQDFMAQCLRESSPAARPSPEK-V 522
           A  +K+ K+     +PSP+    +   G  G++ +  +D   +  ++     +   EK V
Sbjct: 783 AVPVKKAKSP----TPSPSPPRNSDQEGG-GKKKKKKKDKKHKKDKKHKKHKKHKKEKAV 837

Query: 523 PPVLPAPLTPHGTSPVGPPTPPPAP-TDPQLTKARKQEEDDSLSD 566
                A +TP   +          P   P+  K  + E +D+L D
Sbjct: 838 AAAAAAAVTPAAIAAATTTLAQEEPVAAPEPKKETESEAEDNLDD 882


>gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens]
          Length = 1626

 Score = 58.5 bits (140), Expect = 5e-08
 Identities = 134/538 (24%), Positives = 180/538 (33%), Gaps = 70/538 (13%)

Query: 648  QGLP-VPGSPGGQKWVSRWASLADSYSDPGLTEDGLGRRGGEP--EGSLPVRMRRRLP-- 702
            +G P +PGSPG             S  DPG+   G     G P  +GS   R     P  
Sbjct: 1027 RGAPGIPGSPG-------------SRGDPGIGVAGPPGPSGPPGDKGSPGSRGLPGFPGP 1073

Query: 703  QLPSERADSPAGPESSRRSGPGPPELDSE-QPSRLFGQEELDPDSLSDASGSDGGRGPEP 761
            Q P+ R  +P  P    R  PG P L S   P  +     L  D  +D      G    P
Sbjct: 1074 QGPAGRDGAPGNP--GERGPPGKPGLSSLLSPGDI---NLLAKDVCNDCPPGPPGLPGLP 1128

Query: 762  GVEPQDSRRRSP-QEGPTWSRGRRSPRAPGEPTPASFF-----IGDQNGDAVLSRK-PLA 814
            G +        P +EG    +G   P  PG P P          G++  D  + +K    
Sbjct: 1129 GFKGDKGVPGKPGREGTEGKKGEAGP--PGLPGPPGIAGPQGSQGERGADGEVGQKGDQG 1186

Query: 815  APGDGEGLGQTAQPSPPARDGVYVSANGRMVIQLRPGRS--PEPDGPA--PAFLRQESFT 870
             PG    +G    P PP  DG+   A G   IQ  PG+   P P GP+  P    +E   
Sbjct: 1187 HPGVPGFMGPPGNPGPPGADGI-AGAAGPPGIQGSPGKEGPPGPQGPSGLPGIPGEEG-- 1243

Query: 871  KEPASGPPAPGKPPHISSHPLLQDLAATRA-ARMDFHSQDTHLILKETETALAALEAR-- 927
            KE   G P P   P  +  P L      R       H+ D+       E+    L  +  
Sbjct: 1244 KEGRDGKPGPPGEPGKAGEPGLPGPEGARGPPGFKGHTGDSGAPGPRGESGAMGLPGQEG 1303

Query: 928  LLSNSVDAECEGGSTPRPPEDALSGDSDVDTASTVSLRSGKSGPSPTTPQPLRAQKEMSP 987
            L     D    G   P+ P      +    +        G+ GPS T  Q     +  SP
Sbjct: 1304 LPGKDGDTGPTGPQGPQGPRGPPGKNGSPGS-------PGEPGPSGTPGQKGSKGENGSP 1356

Query: 988  SPPAAQDPGGTALVSAREQSSERQHHPLGPTDMG----RGEPVRRSAIRRGHRPRGSLDW 1043
              P    P G       +    ++  P  P + G    RG+P     I+    P G    
Sbjct: 1357 GLPGFLGPRGPPGEPGEKGVPGKEGVPGKPGEPGFKGERGDP----GIKGDKGPPGGKGQ 1412

Query: 1044 PSEERGPVLAHLPSSDVMASNHETPEATGAGRLGSRRKPAAP---PPSPAAREEQSRSSA 1100
            P +   P   H   + +M       E    G  G   +P  P     SP+   E  R   
Sbjct: 1413 PGDPGIP--GHKGHTGLMGPQGLPGENGPVGPPGPPGQPGFPGLRGESPSM--ETLRRLI 1468

Query: 1101 SSQKGPQALTRSNSLSTPRPTRASRLRRARLGDAS--DTEAADGERGSLGNPEPVGRP 1156
              + G Q  TR   L    P    +  + R G       +   G  G +G P   GRP
Sbjct: 1469 QEELGKQLETRLAYLLAQMPPAYMKSSQGRPGPPGPPGKDGLPGRAGPMGEP---GRP 1523



 Score = 45.4 bits (106), Expect = 4e-04
 Identities = 97/367 (26%), Positives = 123/367 (33%), Gaps = 67/367 (18%)

Query: 532 PHGTSPVGPPTPPPAPTDPQLTKARKQEEDDSLSDAGTYTIETEAQDTEVEEARKMIDQV 591
           P G   V   T PP P  PQ       E+   L      TI       E  E       V
Sbjct: 439 PSGPCQVTVVTEPPPPPPPQRPPTPGSEQIGFLK-----TINCSCPAGEKGEMG-----V 488

Query: 592 FGVLESPELSRASSATFRPVIRGDRDESDDGGVAQRMALLQEFASRPLGAAPQAEHQGLP 651
            G +  P       A       G + E  D G+             P G   + E   L 
Sbjct: 489 AGPMGLPGPKGDIGAIGPVGAPGPKGEKGDVGIG------------PFGQGEKGEKGSLG 536

Query: 652 VPGSPG--GQKWVSRWASLADSYSDPGLTEDGLGRRGGEPEGSLPVRMRR-RLPQLPSER 708
           +PG PG  G K +           +PGL  + +G RG +    LP    R   P L  ER
Sbjct: 537 LPGPPGRDGSKGM---RGEPGELGEPGLPGE-VGMRGPQGPPGLPGPPGRVGAPGLQGER 592

Query: 709 ADSPAGPESSRRSGPGPPELDSEQPSRLFGQEELDPDSLSDASGSDGGRGP--EPGVEPQ 766
            +     E   R   G P     +P     Q    P  ++   G  G  GP   PGV   
Sbjct: 593 GEKGTRGEKGERGLDGFP----GKPGDTGQQGRPGPSGVAGPQGEKGDVGPAGPPGVPGS 648

Query: 767 DSRRRSPQEGPTWSRGRRSPR----APGEPTPASFFIGDQNGDAVLSRKPLAAPGDGEGL 822
             +    QEG    +G   PR    APG P  A   IG +  D          P   +GL
Sbjct: 649 VVQ----QEGLKGEQGAPGPRGHQGAPG-PPGARGPIGPEGRD---------GPPGLQGL 694

Query: 823 -GQTAQPSPPARDGVYVSANGRMVIQLRPGRS--PEPDGP--APAFLRQESFTKEPASGP 877
            G+     PP   G+       + +Q  PG    P P GP  +P    +  F  +P  GP
Sbjct: 695 RGKKGDMGPPGIPGL-------LGLQGPPGPPGVPGPPGPGGSPGLPGEIGFPGKP--GP 745

Query: 878 PAPGKPP 884
           P P  PP
Sbjct: 746 PGPTGPP 752


>gi|50301232 synaptopodin 2-like isoform b [Homo sapiens]
          Length = 753

 Score = 58.5 bits (140), Expect = 5e-08
 Identities = 113/450 (25%), Positives = 165/450 (36%), Gaps = 67/450 (14%)

Query: 689  PEGSLPVRMRRRLPQLPSERADSPAGPESSRRSGPGPPELDSEQPSRLFGQEELDPDSLS 748
            P   LP  +    P  P   A +PA    +R + P  P L  ++P+         P +  
Sbjct: 212  PPSPLPAPVASPRPFQPGGGAPTPAPSIFNRSARPFTPGLQGQRPTTT--SVIFRPLAPK 269

Query: 749  DASGSDGGRGPEPGVEPQDSRRRSPQEGPTWSRGRRSPRAPGEPTPASFFIGDQNGDAVL 808
             A+ S GG  P P   P     + P   P+++ G  S  AP   +P++     ++   V 
Sbjct: 270  RANDSLGGLSPAP---PPFLSSQGPTPLPSFTSGVPS-HAPVSGSPST----PRSSGPVT 321

Query: 809  SRKPLAAPGDGEGL---GQTAQPSPPARDGVYVSANGRMVIQLRPGRSPEPDGPAPAFLR 865
            +   L  P     +   G    P+PP+   +  +A+  +   LRP   PE          
Sbjct: 322  ATSSLYIPAPSRPVTPGGAPEPPAPPSAAAMTSTASIFLSAPLRPSARPE---------- 371

Query: 866  QESFTKEPASGPPAPGKPPHISSHPLLQDLAAT----RAARMDFHSQDTHLILKETETAL 921
                   PA GP AP +PP      +    A T     A R     Q      +ET+ + 
Sbjct: 372  ------APAPGPGAP-EPPSAREQRISVPAARTGILQEARRRGTRKQMFRPGKEETKNSP 424

Query: 922  AALEARLLSNSVDAECEGGSTPRPPEDALS-GDSDVDTASTVSLRSGKSGP--SPTTPQP 978
                  L+ N  +    GG+   P EDALS G    +    V  RS K+ P  +P TP P
Sbjct: 425  NPELLSLVQNLDEKPRAGGAESGPEEDALSLGAEACNFMQPVGARSYKTLPHVTPKTPPP 484

Query: 979  L--RAQKEMSPS--PPAAQDPGGTALVSAR-EQSSERQHHPLGPTDMGRGEPV---RRSA 1030
            +  +    M+P   PP A  P    L+      ++     P  P   GRG  +   R+S 
Sbjct: 485  MAPKTPPPMTPKTPPPVAPKPPSRGLLDGLVNGAASSAGIPEPPRLQGRGGELFAKRQSR 544

Query: 1031 IRR-----------GHRPRGSLDWPSEERGPVLAHLPSSDVMASNHETPEATGAGRLGSR 1079
              R           G RPR     PS         LP S   + N   P       L S 
Sbjct: 545  ADRYVVEGTPGPGLGPRPRSPSPTPS---------LPPSWKYSPNIRAPPPIAYNPLLSP 595

Query: 1080 RKPAAPPPSPAAREEQSRSSASSQKGPQAL 1109
              P A    P A+ +  R  A+ ++G +AL
Sbjct: 596  FFPQAARTLPKAQSQGPR--ATPKQGIKAL 623



 Score = 35.8 bits (81), Expect = 0.33
 Identities = 35/119 (29%), Positives = 44/119 (36%), Gaps = 10/119 (8%)

Query: 416 KKRSQSFTHSPSGDPKADKRRGPTPADRDRPSVPAPVQAGG-----RSSGPQRAGSLKRE 470
           K+ + S        P     +GPTP       VP+     G     RSSGP  A S    
Sbjct: 269 KRANDSLGGLSPAPPPFLSSQGPTPLPSFTSGVPSHAPVSGSPSTPRSSGPVTATSSLYI 328

Query: 471 KTEERLGSPSPASRTPARPFGSVGRRSRLAQDFMAQCLRESSPAARPSPEKVPPVLPAP 529
               R  +P  A   PA P  S    +  A  F++  LR   P+ARP      P  P P
Sbjct: 329 PAPSRPVTPGGAPEPPAPP--SAAAMTSTASIFLSAPLR---PSARPEAPAPGPGAPEP 382



 Score = 33.9 bits (76), Expect = 1.3
 Identities = 35/140 (25%), Positives = 47/140 (33%), Gaps = 15/140 (10%)

Query: 426 PSGDPKADKRR--GPTPADRDRPSVPAPVQAGGRSSGPQRAGSLK---REKTEERLGSPS 480
           PS  P+A       P P       +  P    G     +R G+ K   R   EE   SP+
Sbjct: 366 PSARPEAPAPGPGAPEPPSAREQRISVPAARTGILQEARRRGTRKQMFRPGKEETKNSPN 425

Query: 481 PASRT-------PARPFGSVGRRSRLAQDFMAQCLRESSPAARPSPEKVP---PVLPAPL 530
           P   +         R  G+       A    A+      P    S + +P   P  P P+
Sbjct: 426 PELLSLVQNLDEKPRAGGAESGPEEDALSLGAEACNFMQPVGARSYKTLPHVTPKTPPPM 485

Query: 531 TPHGTSPVGPPTPPPAPTDP 550
            P    P+ P TPPP    P
Sbjct: 486 APKTPPPMTPKTPPPVAPKP 505


>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
          Length = 1312

 Score = 57.0 bits (136), Expect = 1e-07
 Identities = 189/810 (23%), Positives = 268/810 (33%), Gaps = 207/810 (25%)

Query: 510  ESSPAARPSPEKVPPVLPAPLTPHGTSPVGPPTPPP-APTDPQLTK-------------- 554
            +  PA  P+P       P+P +P  +SP  PP PPP AP  P   +              
Sbjct: 181  DGGPAPPPAPSSASSS-PSP-SPSSSSPSPPPPPPPPAPPAPPAPRFDIYDPFHPTDEAY 238

Query: 555  ----ARKQEED-------DSLSDAGTYTIETEAQDTEVEEARKMIDQVFGVLESPELSRA 603
                A +Q+ D       +  S AGT + E E ++ E EE  +  ++     E   LS++
Sbjct: 239  SPPPAPEQKYDPFEPTGSNPSSSAGTPSPEEEEEEEEEEEEEEEDEE-----EEEGLSQS 293

Query: 604  SSATFRPVIRGDRDESDDGGVAQRMALLQEFASRPLGAAPQAEHQGLPVPGSPGGQKWVS 663
             S          R      G+    +L Q+F             Q  P PG+P       
Sbjct: 294  IS----------RISETLAGIYDDNSLSQDFPGDESPRPDAQPTQPTPAPGTP------- 336

Query: 664  RWASLADSYSDPGLTEDGLGRRGGEPEGSLPVRMRRRLPQLPSERADSPAGPESSRRSGP 723
                  DS        DG  RR     G+     R     +    A   A P       P
Sbjct: 337  ---PQVDS-----TRADGAMRRRVFVVGTEAEACREGKVSVEVVTAGGAALPP------P 382

Query: 724  GPPELDSEQPSRLFGQEELDPDSLSDASGSDGGRGPEPGVEPQDSRRRSPQEGPTWSRGR 783
              P  DSE       Q E +P  L+ +    GGR   P      +    P   P      
Sbjct: 383  LLPPGDSEIEEGEIVQPEEEP-RLALSLFRPGGRAARPTPAASATPTAQPLPQPP----- 436

Query: 784  RSPRAPGEPTPASFFIGDQNGDAVLSRKPLAAPGDGEG-----LGQTAQPSPPARDGVY- 837
             +PRAP              GD  LS   L A  DGEG     LG+ A P+PPA D  + 
Sbjct: 437  -APRAP-------------EGDDFLS---LHAESDGEGALQVDLGEPA-PAPPAADSRWG 478

Query: 838  -VSANGRMVIQLRP---GRSPEP-DGPAPAFL-------------RQESFTKEPAS---- 875
             +    +++ Q R     RSP P   PAPA               ++    KE AS    
Sbjct: 479  GLDLRRKILTQRRERYRQRSPSPAPAPAPAAAAGPPTRKKSRRERKRSGEAKEAASSSSG 538

Query: 876  ---GPPAPGKPPHISSHPLLQDLAATRAARMDFHSQDTHLILKETETALAALEARLLSNS 932
                PPAP  P     H        +R  +   H+  +           A   +R  S S
Sbjct: 539  TQPAPPAPASPWDSKKH-------RSRDRKPGSHASSS-----------ARRRSRSRSRS 580

Query: 933  VDAECEGGSTPRPPEDALSGDSDVDTASTVSLRSGKSGPSPTTPQPLRAQKEMSPSPPAA 992
                    ST R                    R G S  S +  +  R ++  SP PPA 
Sbjct: 581  RSTRRRSRSTDR--------------------RRGGSRRSRSREKRRRRRRSASP-PPA- 618

Query: 993  QDPGGTALVSAREQSSERQHHPLGPTDMGRGEPVRRSAIRRGHRPRGSLDWPSEERGPVL 1052
                     ++   SS R+ H     D G  +  ++ +  RG +  G       E+ P  
Sbjct: 619  ---------TSSSSSSRRERHRGKHRDGGGSKKKKKRSRSRGEKRSGD----GSEKAPAP 665

Query: 1053 AHLPSSDVMASNHETPEATGAGRLGSRRKPAAPPPSPAAREEQ----------SRSSASS 1102
            A  PS            +T  G   SRR+ A PP      +             R   S 
Sbjct: 666  APPPSG-----------STSCGDRDSRRRGAVPPSIQDLTDHDLFAIKRTITVGRLDKSD 714

Query: 1103 QKGP----------QALTRSNSLS-TPRPTRASRLRRARLGDASDTEAADGERGSLGNPE 1151
             +GP          + L  S  LS   R  ++S+  R R G AS + ++  E+GS     
Sbjct: 715  PRGPSPAPASSPKREVLYDSEGLSGEERGGKSSQKDRRRSGAAS-SSSSSREKGSRRKAL 773

Query: 1152 PVGRPAAEQAKKLSRLDILAMPRKRAGSFTGTSDPEAAPARTSFSGRSVELCCASRKPTM 1211
              G    ++ +   R       R    S   +  P   P  +     S    C+SRK  +
Sbjct: 774  DGGDRDRDRDRDRDRDRSSKKARPPKESAPSSGPPPKPPVSSGSGSSSSSSSCSSRKVKL 833

Query: 1212 AEARAVSRKAANTATTTGPRQPFSRARSGS 1241
                AV  +   ++TT  P +  + A  GS
Sbjct: 834  QSKVAVLIREGVSSTT--PAKDAASAGLGS 861



 Score = 52.8 bits (125), Expect = 3e-06
 Identities = 135/593 (22%), Positives = 198/593 (33%), Gaps = 130/593 (21%)

Query: 702  PQLPSERADSPAGPESSRRSGPGPPELDSEQPSRLFGQEEL-DPDSLSDASGSDGGRGPE 760
            P  PS  + SP+   SS    P PP      P+    + ++ DP   +D + S     P 
Sbjct: 187  PPAPSSASSSPSPSPSSSSPSPPPPPPPPAPPAPPAPRFDIYDPFHPTDEAYS-----PP 241

Query: 761  PGVEPQDSRRRSPQEGPTWSRGRRSPRAPGEPTPASFFIGDQNGDAVLSRKPLAAPGDGE 820
            P  E +          P+ S G  SP    E         ++  D            + E
Sbjct: 242  PAPEQKYDPFEPTGSNPSSSAGTPSPEEEEEEEEEE---EEEEEDEE----------EEE 288

Query: 821  GLGQTAQPSPPARDGVYVSANGRMVIQLRPG-RSPEPDGPAPAFLRQESFTKEPASGPPA 879
            GL Q+         G+Y   +   + Q  PG  SP PD              +P    PA
Sbjct: 289  GLSQSISRISETLAGIY---DDNSLSQDFPGDESPRPDA-------------QPTQPTPA 332

Query: 880  PGKPPHISSHPLLQDLAATRAARMDFHSQDTHLILKETETALAALEARLLSNSVDAECEG 939
            PG PP + S         TRA      +    + +  TE A A  E ++   SV+    G
Sbjct: 333  PGTPPQVDS---------TRADG----AMRRRVFVVGTE-AEACREGKV---SVEVVTAG 375

Query: 940  GSTPRPPEDALSGDSDVDTASTVS-----------LRSGKSGPSPTTPQPLRAQKEMSPS 988
            G+   PP     GDS+++    V             R G     PT         +  P 
Sbjct: 376  GAA-LPPPLLPPGDSEIEEGEIVQPEEEPRLALSLFRPGGRAARPTPAASATPTAQPLPQ 434

Query: 989  PPAAQDPGGTALVSAREQSSERQHHPLGPTDMGRGEPVRRSAIRRGHRPRGSLDWPSEER 1048
            PPA + P G   +S   +S       +   D+G   P   +A  R     G LD   +  
Sbjct: 435  PPAPRAPEGDDFLSLHAESDGEGALQV---DLGEPAPAPPAADSRW----GGLDLRRK-- 485

Query: 1049 GPVLAHLPSSDVMASNHETPEATGAGRLGSRRKPAAPPPSPAAREEQSRSSASSQKGPQA 1108
                       ++    E        R   R    AP P+PAA             GP  
Sbjct: 486  -----------ILTQRRE--------RYRQRSPSPAPAPAPAA-----------AAGP-- 513

Query: 1109 LTRSNSLSTPRPTR-ASRLRRARLGDASDTEAADGERGSLGNPEPVGRPAAEQAKKLSRL 1167
                       PTR  SR  R R G+A   EAA    G+   P P    +   +KK    
Sbjct: 514  -----------PTRKKSRRERKRSGEAK--EAASSSSGT--QPAPPAPASPWDSKKHRSR 558

Query: 1168 DILAMPRKRAGSFTGTSDPEAAPART-SFSGRSVELCCASRKPTMAEARAVSRKAANTAT 1226
            D      ++ GS   +S    + +R+ S S R        R+     +R+  ++     +
Sbjct: 559  D------RKPGSHASSSARRRSRSRSRSRSTRRRSRSTDRRRGGSRRSRSREKRRRRRRS 612

Query: 1227 TTGPRQPFSRARSGSARYTSTTQTPRAGSSSRARSRAPG-PRDTDDDEEEPDP 1278
             + P    S + S   R+    +        + RSR+ G  R  D  E+ P P
Sbjct: 613  ASPPPATSSSSSSRRERHRGKHRDGGGSKKKKKRSRSRGEKRSGDGSEKAPAP 665



 Score = 32.7 bits (73), Expect = 2.8
 Identities = 67/318 (21%), Positives = 102/318 (32%), Gaps = 62/318 (19%)

Query: 229 PTKETPQPSQPPEVPAH-----------------------EMPTKDAEAGGGGAAPVVQS 265
           PT+ TP P  PP+V +                        ++  +   AGG    P +  
Sbjct: 326 PTQPTPAPGTPPQVDSTRADGAMRRRVFVVGTEAEACREGKVSVEVVTAGGAALPPPLLP 385

Query: 266 HASFTIEFDDCSPGKMKIKDHITKFSLRQRRPPGKEATPGEMVSAETKVADWLVQ----- 320
                IE      G++   +   + +L   RP G+ A P    SA T  A  L Q     
Sbjct: 386 PGDSEIE-----EGEIVQPEEEPRLALSLFRPGGRAARPTPAASA-TPTAQPLPQPPAPR 439

Query: 321 ----NDPSLLHRVGPGDDR---------------HSTKSDLPVHTRTLKGHKHEDGTQSD 361
               +D   LH    G+                  S    L +  + L   +     +S 
Sbjct: 440 APEGDDFLSLHAESDGEGALQVDLGEPAPAPPAADSRWGGLDLRRKILTQRRERYRQRSP 499

Query: 362 SEDPLAKAASAAGVPLEASGEQVRLQR-QIKRDPQELLHNQQAFVIEFFDEDTPRKKRSQ 420
           S  P    A+AAG P      + R +  + K         Q A        D+   K+ +
Sbjct: 500 SPAPAPAPAAAAGPPTRKKSRRERKRSGEAKEAASSSSGTQPAPPAPASPWDS---KKHR 556

Query: 421 SFTHSPSGDPKADKRRGPTPADRDRPSVPAPVQAGGRSSGPQRAGSLKREKTEERLGSPS 480
           S    P     +  RR      R R +         R  G +R+ S ++ +   R  SP 
Sbjct: 557 SRDRKPGSHASSSARRRSRSRSRSRSTRRRSRSTDRRRGGSRRSRSREKRRRRRRSASPP 616

Query: 481 PASRTPARPFGSVGRRSR 498
           PA+ +      S  RR R
Sbjct: 617 PATSS-----SSSSRRER 629


>gi|21314720 Smad nuclear interacting protein [Homo sapiens]
          Length = 396

 Score = 57.0 bits (136), Expect = 1e-07
 Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 11/94 (11%)

Query: 16  HRLPRELIFVGREECELMLQSRSVDKQHAVINYDQ-----------DRDEHWVKDLGSLN 64
           HR    L+   R   ++ +   S  KQHAV  Y              R + ++ DLGS N
Sbjct: 276 HRQSAYLLGRHRRIADIPIDHPSCSKQHAVFQYRLVEYTRADGTVGRRVKPYIIDLGSGN 335

Query: 65  GTFVNDMRIPDQKYVTLKLNDVIRFGYDSNMYVL 98
           GTF+N+ RI  Q+Y  LK  DV++FG+ S  YVL
Sbjct: 336 GTFLNNKRIEPQRYYELKEKDVLKFGFSSREYVL 369


>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 [Homo
            sapiens]
          Length = 2231

 Score = 57.0 bits (136), Expect = 1e-07
 Identities = 149/715 (20%), Positives = 232/715 (32%), Gaps = 126/715 (17%)

Query: 641  AAPQAEHQGLPVPGSPGGQKWVSRWASLADSYSDPGLTEDGLGRRGGE---PEGSLPVRM 697
            ++P+ +  G+ +    GG   +S+ A+        G    G  R  G+   P G+ P   
Sbjct: 311  SSPRQQGGGMMMGPGGGGAASLSKAAA--------GSAAGGFQRFAGQNQHPSGATPTLN 362

Query: 698  RRRLPQLPSERADSPAGPESSRRSGPGPPELDSEQPSRLFG------QEELDPDSLSDAS 751
            +      P  R+   + PE S  S P PP    +  +   G      Q         D  
Sbjct: 363  QLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMG 422

Query: 752  GSDGGRGPEPGVEPQDSR-RRSP-QEGPTWSRGRRSPRAP----------------GEPT 793
                   P      Q S    SP   GPT  R + SP  P                 +P 
Sbjct: 423  AQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQ 482

Query: 794  PASFFIGDQNGDAVLSRKPLA----APGDGEGLGQTAQPSPPARDGVYVSANGRMVIQLR 849
             +S + G   G     R P+      PG   G+    Q  PP      VS   +   Q  
Sbjct: 483  QSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQMPPQYGQQGVSGYCQQGQQPY 542

Query: 850  PGRSPEPDGPAP-----------AFLRQESFTKE---PASGPP-APGKPPHISSHPLLQD 894
              + P+P    P            +  Q+  ++E     S PP APGKP H         
Sbjct: 543  YSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNH--------- 593

Query: 895  LAATRAARMDFHSQDTHLILKETETALAALEARL----------LSNSVDAECEGGSTPR 944
                         +D +LI +E  ++L  L   +          LS++V A    GST  
Sbjct: 594  -------------EDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSA---SGSTSS 637

Query: 945  PPEDALSGDSDVDTASTVSLRSGKSGPSPT-TPQPLRAQKEMSPSPPAAQDPGGTALVSA 1003
              + +    S     ++  L S   GPSP+    P+ + +  S     A  PG       
Sbjct: 638  QGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQP 697

Query: 1004 REQSSERQHHP-LGPTDMGRGEPVRRSAIRRGHRPRGSLDWPSEERGPVLAHLPS--SDV 1060
                SE   HP L  + M    P  R  +    R      +  ++ GP ++  PS    +
Sbjct: 698  PGSQSESSSHPALSQSPM----PQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQM 753

Query: 1061 MASNHETPEATGAGRLGSRRKPAAP------PPSPAAREEQSRSSASSQKGPQALTRSNS 1114
             A      ++  +G  G +     P      PP+ +     S S      G  A  + + 
Sbjct: 754  HAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHG 813

Query: 1115 LSTPRPTRASRLRR------------ARLGDASDTEAADGERG--SLGNPEPVGRPAAEQ 1160
                +P  A  L R              +   + +     ++G   +G P P     A++
Sbjct: 814  QGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQE 873

Query: 1161 AKKLSRLDILAMPRKRAGSFTG--------TSDPEAAPARTSFSGRSVELCCASRKPTMA 1212
            A            + R GSF G        +S P + P   S S  + +    S  P M 
Sbjct: 874  AAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMV 933

Query: 1213 EARAVSRKAANTATTTGPRQPFSRARSGSARYTSTTQTPRAGS-SSRARSRAPGP 1266
             + A S   A+  +    + P      G    T   ++    S SS+  S+ P P
Sbjct: 934  NSSAASVGLADMMSPGESKLPLPLKADGKEEGTPQPESKSKDSYSSQGISQPPTP 988



 Score = 33.5 bits (75), Expect = 1.6
 Identities = 55/258 (21%), Positives = 94/258 (36%), Gaps = 44/258 (17%)

Query: 691  GSLPVRMRRRLPQLPSERADSPAGPESSRRSGPGPP-------ELDSEQPSRLFGQEELD 743
            G+   +M +  PQ    R  + +G  S+  SGPGP        ++  + PS+  G   L 
Sbjct: 767  GTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLG 826

Query: 744  ------------PDSLSDASGSDGGRGPE--PGV-EPQDSRRRSPQEGPTWSRGRRSPRA 788
                        P ++S  + S  G   +  PG+  P  +  R  QE    +       A
Sbjct: 827  RMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEA---AAAVMQAAA 883

Query: 789  PGEPTPASFFIGDQNGDAVLSRKPLAAPGDGEGLGQTAQPSPPARDGVYVSANGRMV--- 845
                +    F G      + S  P + P +        Q  P +     V+++   V   
Sbjct: 884  NSAQSRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLA 943

Query: 846  IQLRPGRSPEP-----DG-----PAPAFLRQESFTKEPASGPPAPGKPPHISSHPLLQDL 895
              + PG S  P     DG     P P    ++S++ +  S PP PG      + P+   +
Sbjct: 944  DMMSPGESKLPLPLKADGKEEGTPQPESKSKDSYSSQGISQPPTPG------NLPVPSPM 997

Query: 896  AATRAARMDFHSQDTHLI 913
            + + A+   FH  ++  I
Sbjct: 998  SPSSASISSFHGDESDSI 1015



 Score = 33.5 bits (75), Expect = 1.6
 Identities = 48/212 (22%), Positives = 79/212 (37%), Gaps = 15/212 (7%)

Query: 686  GGEPEGSLPVRMRRRLPQLPSERADSPAGPESSRRSGPGP----PELDSEQPSRLFGQEE 741
            G  P G +P    +  P   +  + +P+ P  S++ GPG     P ++ +         +
Sbjct: 821  GAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQ 880

Query: 742  LDPDSLSDASGSDGGRGPEPGVEPQDSRRRSPQEGPTWSRGRRSPRAPGEP-----TPAS 796
               +S     GS  G   + G+    S    P    +     ++P     P     + AS
Sbjct: 881  AAANSAQSRQGSFPGMN-QSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAAS 939

Query: 797  FFIGDQNGDAVLSRKPLAAPGDGEGLGQTAQPSPPARDGVYVSANGRMVIQLRPGRSPEP 856
              + D       S+ PL    DG+  G T QP   ++D    S+ G +     PG  P P
Sbjct: 940  VGLADMMSPGE-SKLPLPLKADGKEEG-TPQPESKSKDSY--SSQG-ISQPPTPGNLPVP 994

Query: 857  DGPAPAFLRQESFTKEPASGPPAPGKPPHISS 888
               +P+     SF  + +    +PG P   SS
Sbjct: 995  SPMSPSSASISSFHGDESDSISSPGWPKTPSS 1026


>gi|18079216 CASK interacting protein 1 [Homo sapiens]
          Length = 1431

 Score = 56.6 bits (135), Expect = 2e-07
 Identities = 186/779 (23%), Positives = 255/779 (32%), Gaps = 133/779 (17%)

Query: 540  PPTPPPAPTDPQLTKARKQEEDDSLSDAGTYTIETEAQDTEVEEARKMIDQVFGVLESPE 599
            PP P P P D Q  K    + D  LSD      E +A  T   E     ++    L  P 
Sbjct: 634  PPPPEPTPADCQSPKMTTFQ-DSELSD------ELQAAMTGPAEVGPTTEKPSSHL--PP 684

Query: 600  LSRASSATFRPVIRGDRDESDDGGVAQRMALLQEFASR--PLGAAPQAEHQGL-----PV 652
              RA++          R +S  GG A+ M+  QE      P  ++P +  Q       P 
Sbjct: 685  TPRATT----------RQDSSLGGRARHMSSSQELLGDGPPGPSSPMSRSQEYLLDEGPA 734

Query: 653  PGSPGGQKWVSRWASLADSYSDPGLTEDGLGRRGGEPEGSLPVRMRRRLPQLPSERADSP 712
            PG+P  +             + PG     + R    P   +P + R+ LP  P     +P
Sbjct: 735  PGTPPRE-------------ARPGRHGHSIKRASVPP---VPGKPRQVLP--PGTSHFTP 776

Query: 713  AGPESSRRSGPGPPEL--DSEQPSRLFGQEELDPDSLSDASGSDGGRGPEPGVEPQDSRR 770
              P++  ++ PG P+       P+    + +  P  L         R   P   PQ    
Sbjct: 777  --PQTPTKTRPGSPQALGGPHGPAPATAKVKPTPQLLPPTE-----RPMSPRSLPQSPTH 829

Query: 771  RS-PQEGPTWSRGRRSPRAPGE-----PTPASFFIGDQNGDAVLSRKPLAAPGDGEGLGQ 824
            R      P    G   P APG      PT           DA   R    A         
Sbjct: 830  RGFAYVLPQPVEGEVGPAAPGPAPPPVPTAVPTLCLPPEADAEPGRPKKRAHSLNR---Y 886

Query: 825  TAQPSPPARDGVYV--SANGRMVIQLRPGRSPEPDGPAPA---FLRQESFTKEPAS-GPP 878
             A  S P RD + V  +A     +Q R GRS     PA A     R +SF   P   GPP
Sbjct: 887  AASDSEPERDELLVPAAAGPYATVQRRVGRSHSVRAPAGADKNVNRSQSFAVRPRKKGPP 946

Query: 879  APGKPPHISSHPLLQDLAATRAARMDFHSQDTHLILKETETALAALEARL-----LSNSV 933
             P  PP  SS  L     A           D  +   E E  L  + A+      L+ SV
Sbjct: 947  PP--PPKRSSSALASANLA-----------DEPVPDAEPEDGLLGVRAQCRRASDLAGSV 993

Query: 934  DAECEGGSTPRPPEDALSGDSDVDTASTVSLR--SGKSGPSPTTPQPLRAQKEM-SPSPP 990
            D    G         A+   S +      + R   G   P P +P+P R    + S    
Sbjct: 994  DTGSAGSVKSIA---AMLELSSIGGGGRAARRPPEGHPTPRPASPEPGRVATVLASVKHK 1050

Query: 991  AAQDPGGTALVSAREQSSERQHHPLGPTDMGRGE-----PVRRSAIRRGHRPRGSLDWPS 1045
             A  PGG  +V+ R   S      L     G GE     P       R  RPRG     +
Sbjct: 1051 EAIGPGGE-VVNRRRTLSGPVTGLLATARRGPGESADPGPFVEDGTGR-QRPRGPSKGEA 1108

Query: 1046 EERGPVLAHLPSSDVMA------SNHE-------TPEATGAGRLGSRRKPAAPPPSPAAR 1092
               GP LA + +S  +        N +       T   T   R  ++ + A P P P   
Sbjct: 1109 GVEGPPLAKVEASATLKRRIRAKQNQQENVKFILTESDTVKRRPKAKEREAGPEPPPPLS 1168

Query: 1093 EEQS------RSSASSQKGPQALTRSNSLSTPRPTRASRLRRARLGDASDTEAADGERGS 1146
               +      R  AS Q GP  L      + P PT  + L              +GE   
Sbjct: 1169 VYHNGTGTVRRRPASEQAGPPELPPPPPPAEPPPTDLAHL--------PPLPPPEGEARK 1220

Query: 1147 LGNPEPVGRPAAEQAKKLSRLDILAMPRKRAGSFTGTSDPEAAPARTSFSGRSVELCCAS 1206
               P    +P   Q   + +L     P  +     G   PE   A  +    S +     
Sbjct: 1221 PAKPPVSPKPVLTQP--VPKLQGSPTPTSKKVPLPGPGSPEVKRAHGTPPPVSPK----- 1273

Query: 1207 RKPTMAEARAVSRKAANTATTTGPRQPFSRARSGSARYTSTTQTPRAGSSSRARSRAPG 1265
              P     + V   A   + + GP    S AR   A       TP +  +S A+  +PG
Sbjct: 1274 PPPPPTAPKPVKAVAGLPSGSAGPSPAPSPARQPPAALAKPPGTPPSLGASPAKPPSPG 1332



 Score = 56.6 bits (135), Expect = 2e-07
 Identities = 103/417 (24%), Positives = 143/417 (34%), Gaps = 82/417 (19%)

Query: 190  PYPERPKGPVQQD-GELHGFRAPAEPQGCSFRREPSYFEIPTKETPQPSQPPEVPAH--- 245
            P    P   VQ+  G  H  RAPA     +  R  S+   P K+ P P  P    +    
Sbjct: 901  PAAAGPYATVQRRVGRSHSVRAPAGADK-NVNRSQSFAVRPRKKGPPPPPPKRSSSALAS 959

Query: 246  ----EMPTKDAEAGGG--GAAPVVQSHASFTIEFDDCSPGKMKIKDHITKFSL------R 293
                + P  DAE   G  G     +  +      D  S G +K    + + S        
Sbjct: 960  ANLADEPVPDAEPEDGLLGVRAQCRRASDLAGSVDTGSAGSVKSIAAMLELSSIGGGGRA 1019

Query: 294  QRRPPGKEATPGEMVSAETKVADWLVQNDPSLLHR--VGPGDDRHSTKSDLPVHTRTL-- 349
             RRPP    TP        +VA  L     S+ H+  +GPG +  + +  L      L  
Sbjct: 1020 ARRPPEGHPTPRPASPEPGRVATVLA----SVKHKEAIGPGGEVVNRRRTLSGPVTGLLA 1075

Query: 350  -----------KGHKHEDGT-QSDSEDPLAKAASAAGVPLEASGEQVRLQRQIKRDPQEL 397
                        G   EDGT +     P    A   G PL        L+R+I+      
Sbjct: 1076 TARRGPGESADPGPFVEDGTGRQRPRGPSKGEAGVEGPPLAKVEASATLKRRIRAK---- 1131

Query: 398  LHNQQAFVIEFFDEDTPRKKRSQSFTHSPSGDPKADKRR-GPTPADRDRPSVPAPVQAGG 456
              NQQ  V     E    K+R           PKA +R  GP P        P P+    
Sbjct: 1132 -QNQQENVKFILTESDTVKRR-----------PKAKEREAGPEP--------PPPLSVYH 1171

Query: 457  RSSGPQRAGSLKREKTEERLGSPSPASRTPAR----------PFGSVGRRSR---LAQDF 503
              +G  R      +     L  P P +  P            P G   + ++     +  
Sbjct: 1172 NGTGTVRRRPASEQAGPPELPPPPPPAEPPPTDLAHLPPLPPPEGEARKPAKPPVSPKPV 1231

Query: 504  MAQCLRESSPAARPSPEKVPPVLPAPLTP-----HGTSPVGPPTPPPAPTDPQLTKA 555
            + Q + +   +  P+ +KVP  LP P +P     HGT P   P PPP PT P+  KA
Sbjct: 1232 LTQPVPKLQGSPTPTSKKVP--LPGPGSPEVKRAHGTPPPVSPKPPPPPTAPKPVKA 1286



 Score = 46.2 bits (108), Expect = 2e-04
 Identities = 185/853 (21%), Positives = 261/853 (30%), Gaps = 194/853 (22%)

Query: 229  PTKETPQPSQPPEVPAHEMPTKDAEAGGGGAAPVVQSHASFTIEFDDCSPGKMKIKDHIT 288
            PT E P    PP   A    T   ++  GG A  + S         D  PG         
Sbjct: 673  PTTEKPSSHLPPTPRA----TTRQDSSLGGRARHMSSSQEL---LGDGPPGPSSPMSRSQ 725

Query: 289  KFSLRQRRPPG---KEATPGEMVSAETKVADWLVQNDPSLLHRVGPGDDRHSTKSDLPVH 345
            ++ L +   PG   +EA PG    +  + +   V   P    +V P    H T    P  
Sbjct: 726  EYLLDEGPAPGTPPREARPGRHGHSIKRAS---VPPVPGKPRQVLPPGTSHFTPPQTPTK 782

Query: 346  TRTLKGHKHEDGTQSDSEDPLAKAASAAGVP----LEASGEQVRLQRQIKRDPQELLHNQ 401
            TR         G+      P   A + A V     L    E+    R +   PQ   H  
Sbjct: 783  TRP--------GSPQALGGPHGPAPATAKVKPTPQLLPPTERPMSPRSL---PQSPTHRG 831

Query: 402  QAFVIEFFDEDTPRKKRSQSFTHSPSGDPKADKRRGPTPADRDRPSVPAPVQAGGRSSGP 461
             A+V+       P+    +    +P           P P     P++  P +A      P
Sbjct: 832  FAYVL-------PQPVEGEVGPAAPGP--------APPPVPTAVPTLCLPPEADAEPGRP 876

Query: 462  Q-RAGSLKR----EKTEERLGSPSPASRTPARPFGSVGRRSRLAQDFMAQC------LRE 510
            + RA SL R    +   ER     PA+   A P+ +V RR   +    A         R 
Sbjct: 877  KKRAHSLNRYAASDSEPERDELLVPAA---AGPYATVQRRVGRSHSVRAPAGADKNVNRS 933

Query: 511  SSPAARPSPEKVPPVLPAPLTPHGTSPVGPPTPPPAPTDPQLTKARKQEEDDSLSDAGTY 570
             S A RP  +                  GPP PPP  +   L  A   +E    ++    
Sbjct: 934  QSFAVRPRKK------------------GPPPPPPKRSSSALASANLADEPVPDAEPEDG 975

Query: 571  TIETEAQDTEVEEARKMID--------QVFGVLESPELSRASSATFRPVIRGDRDES--- 619
             +   AQ     +    +D         +  +LE   +     A  RP            
Sbjct: 976  LLGVRAQCRRASDLAGSVDTGSAGSVKSIAAMLELSSIGGGGRAARRPPEGHPTPRPASP 1035

Query: 620  DDGGVAQRMALLQEFASRPLGAAPQAEHQGLPVPGSPGGQKWVSRWASLADSYSDPG-LT 678
            + G VA  +A ++      +G   +  ++   + G   G    +R        +DPG   
Sbjct: 1036 EPGRVATVLASVKH--KEAIGPGGEVVNRRRTLSGPVTGLLATARRGP--GESADPGPFV 1091

Query: 679  EDGLGR---RG---------GEP----EGSLPVRMRRRLPQLPSERAD-----------S 711
            EDG GR   RG         G P    E S  ++ R R  Q   E               
Sbjct: 1092 EDGTGRQRPRGPSKGEAGVEGPPLAKVEASATLKRRIRAKQNQQENVKFILTESDTVKRR 1151

Query: 712  PAGPESSRRSGPGPPE-----------LDSEQPSRLFGQEELDPDSLSDASGSDGGRGPE 760
            P   E  R +GP PP            +     S   G  EL P     A          
Sbjct: 1152 PKAKE--REAGPEPPPPLSVYHNGTGTVRRRPASEQAGPPELPPPP-PPAEPPPTDLAHL 1208

Query: 761  PGVEPQDSRRRSPQEGPTWSRG---RRSPRAPGEPTPASFFIGDQNGDAVLSRKPLAAPG 817
            P + P +   R P + P   +    +  P+  G PTP S             + PL  PG
Sbjct: 1209 PPLPPPEGEARKPAKPPVSPKPVLTQPVPKLQGSPTPTS------------KKVPLPGPG 1256

Query: 818  DGE-----GLGQTAQPSPPARDGVYVSANGRMVIQLRPGRSPEPDGPAPAFLRQESFTKE 872
              E     G      P PP              ++   G      GP+PA          
Sbjct: 1257 SPEVKRAHGTPPPVSPKPPP------PPTAPKPVKAVAGLPSGSAGPSPA--------PS 1302

Query: 873  PASGPPA-----PGKPPHISSHPLLQDLAATRAARMDFHSQDTHLILKETETALAALEAR 927
            PA  PPA     PG PP + + P         A          H+  K    A AA  A 
Sbjct: 1303 PARQPPAALAKPPGTPPSLGASPAKPPSPGAPAL---------HVPAKPPRAAAAAAAA- 1352

Query: 928  LLSNSVDAECEGGSTPRPPEDALSGDSDVDTASTVSLRSGKSGPSPTTPQPLRAQKEMSP 987
                         + P PPE A  GDS        S  +  +       + +R +    P
Sbjct: 1353 -----------AAAPPAPPEGASPGDSARQKLEETS--ACLAAALQAVEEKIRQEDAQGP 1399

Query: 988  SPPAAQDPGGTAL 1000
               AA+   G+ L
Sbjct: 1400 RDSAAEKSTGSIL 1412


>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapiens]
          Length = 816

 Score = 56.6 bits (135), Expect = 2e-07
 Identities = 172/761 (22%), Positives = 252/761 (33%), Gaps = 97/761 (12%)

Query: 477  GSPSPASR-TPAR-----PFGSVGRR--SRLAQDFMAQCLRESSPAARPSPEKVPPVLPA 528
            GSP P    TPA        G+VGR+  +  A       + ES+P A P+    PP    
Sbjct: 31   GSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRAGPTRTSRPPA--- 87

Query: 529  PLTPHGTSPVGPPTPPPAPTDP-QLTKARKQEEDDSLSDAGTYTIETEAQDTEVEEARKM 587
                   S  G   PP   T P  ++   +          G   +   A++T        
Sbjct: 88   -------SGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGK--- 137

Query: 588  IDQVFGVLESPELSRASSATFRPVIRGDRDESDDGGVAQRMALLQEFASRPLGAAPQAEH 647
                    E+P+ S  S+       R D      G  +  MA     A   +G  P+   
Sbjct: 138  ------ATEAPKRSALSAGA-----RRDTSGPTPGTPSPAMARRSRAAGTEVGL-PRPAP 185

Query: 648  QGLPVPGSPGGQKWVSRWASLADSYSDPGLTEDGLGRRGGEPEGSLPVRMRRRLPQLPSE 707
               P P + G +K VS       S S+   TE     R     G    R   R     + 
Sbjct: 186  SARPRPPTEGPRKSVS-------SASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSAT 238

Query: 708  RADSPAGPESSRRSGPGPPELDSEQPSRLFGQEELDPDSLS----DASGSDGGRGPEPGV 763
               SPA    S R  P  P   S+   +  G + L P  ++    DA+ + G     P  
Sbjct: 239  PLSSPARSGPSARGTPRAPAHPSQPKPK--GLQALRPPQVTPPRKDAAPALGPLSSSPLA 296

Query: 764  EPQDSRRRSPQEGPTWSRGRRSPRAPGEPTPASFFIGDQNGDAVLS------RKPLAAPG 817
             P  S   SP   P+       P  P  P+ A+  +G     A  S        PLA P 
Sbjct: 297  TPSPSAPPSPSAPPSLQTLPSPPATP--PSQATTSLGSPTLQATHSFLPSPPLSPLATPP 354

Query: 818  DGEGLGQT-----AQPSPPARDGVYVSA-------NGRMVIQLRPGRSPEPDGPAPA-FL 864
                         A PSPPA   +   A       N   V  L+   SP P  P  A F 
Sbjct: 355  PQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFS 414

Query: 865  RQESFTKEPASGPPAPGKPPHISSHPLLQDLAATRAARMDFHSQDTHLILKETETALAAL 924
               S    P++ PP+   PP +++ PL    +   +  M   +        +    LAA 
Sbjct: 415  PPASPPVSPSATPPSQA-PPSLAAPPLQVPPSPPASPPMSPSATPP----PQAPPPLAAP 469

Query: 925  EARLLSNSVDAECEGGSTPRP----PEDALSGDSDVDTASTVSLRSGKSGPSPTTPQPLR 980
              +L      A     + P      P  +  G +    ++++ + S  + P P  P  L 
Sbjct: 470  PLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPM-SPLATPPPQAPPVLA 528

Query: 981  AQK-EMSPSPPAAQD---------PGGTALVSAREQSSERQHHP-----LGPTDMGRGEP 1025
            A   ++ PSPPA+           PG    VS    +      P       P+    G  
Sbjct: 529  APLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPD 588

Query: 1026 VRRSAIRRGHRPRGSLDWPSEERGPVLAHLPSSDVMASNHETPEATG-AGRLGSRRKPAA 1084
            +   +      P     + S   G   A  P    +A+ H    + G A  L  R  P A
Sbjct: 589  LAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGA 648

Query: 1085 PPPSPAAREEQSRSSASS---QKGPQALTRSNSLSTPRPTRASRLRRARLGDASDTEAAD 1141
            P P P A    S     +    +GP++ T +     P P+  +   +A  G  +   +  
Sbjct: 649  PLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSPGTSGGKAAAGAGAGASSRS 708

Query: 1142 GERGSLGNPEPVGRPAAEQAKKLSRLDILAMPRKRAGSFTG 1182
             ++  LG        A+     LSR  +LA     AG   G
Sbjct: 709  PKQARLGELPLGALQASVVQHLLSRTLLLAAAEGAAGGSGG 749



 Score = 51.2 bits (121), Expect = 8e-06
 Identities = 113/503 (22%), Positives = 155/503 (30%), Gaps = 96/503 (19%)

Query: 414 PRKKRSQSFTHSPSGDPKADKRRGPT-------PADRDRPSVPAPVQAGGRSSGPQRAGS 466
           PRK  S +  HS + +P    RR P+       PA R   S   P+ +  R SGP   G+
Sbjct: 196 PRKSVSSASEHSTT-EPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPAR-SGPSARGT 253

Query: 467 LKREKTEERLGSPSPASRTPARPFGSVGRRSRLAQ---DFMAQCLRESSPAARPSPEKVP 523
               +       P P      RP      R   A       +  L   SP+A PSP   P
Sbjct: 254 ---PRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPP 310

Query: 524 PV--LPA-PLTP--HGTSPVGPPT-----------------PPPAPTDPQLTKARKQEED 561
            +  LP+ P TP    T+ +G PT                  PP    P L     Q   
Sbjct: 311 SLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPP 370

Query: 562 DSLSDAGTYTIETEAQDTEVEEARKMIDQVFGVLESPELSRASSATFRPVIRGDRDESDD 621
              +      + T +       A  ++   F    SP +    S    P +         
Sbjct: 371 SPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQ 430

Query: 622 GGVAQRMALLQEFASRPLGAAPQAEHQGLPVPGSPGGQKWVSRWASLADSYSDPGLTEDG 681
              +     LQ   S P  A+P       P P +P          +     + P L    
Sbjct: 431 APPSLAAPPLQVPPSPP--ASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPP 488

Query: 682 L-----------GRRGGEPEGSLPVR------------MRRRLPQLPSERADSP------ 712
           L           G+    P  SLP+             +   L Q+P     SP      
Sbjct: 489 LQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPR 548

Query: 713 -----------AGPESSRRSGPGPPELDSEQPSRLFGQEELDPDSLSDASGSDGGRGPEP 761
                      +GP  +    PGPP   S  PS      +L   S S  S  +  RG + 
Sbjct: 549 RPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDS 608

Query: 762 GVE------PQDSRRRSPQEGPTWSRGRRSP----RAPGEPTPASFFIGDQNGDAVLSRK 811
           G E      P      +      WSRG   P     APG P P     G  + D + +  
Sbjct: 609 GPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIY 668

Query: 812 PLAAPGDGEGLGQTAQPSPPARD 834
               P       ++A P+P A D
Sbjct: 669 ETEGP-------ESATPAPGALD 684



 Score = 48.1 bits (113), Expect = 6e-05
 Identities = 89/347 (25%), Positives = 124/347 (35%), Gaps = 66/347 (19%)

Query: 1067 TPEATGAGRL-----GSRRKPAAPPPSPAAREEQSRSSASSQKG-------------PQA 1108
            TP A   G L     GS R P  PP +PAA      + A  +K              P++
Sbjct: 16   TPAARAPGLLTPRPPGSPRPP--PPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPES 73

Query: 1109 LTRSNSLSTPRPTRASRLRRA------RLGDASDTEAADGER--GSLGNP-------EPV 1153
              R+    T RP  + R  RA        G  S    A G    G LG         E V
Sbjct: 74   APRAGPTRTSRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETV 133

Query: 1154 GRPAAEQAKKLSRLDILAMPRKRAGSFTGTSDPEAAPARTSFSGRSVEL-----CCASRK 1208
             R  A +A K S L   A  R  +G   GT  P  A  R+  +G  V L         R 
Sbjct: 134  ARGKATEAPKRSALSAGAR-RDTSGPTPGTPSPAMA-RRSRAAGTEVGLPRPAPSARPRP 191

Query: 1209 PTMAEARAVSRKAANTATTTGP------------RQPFSRARSGSARYTSTTQTPRAGSS 1256
            PT    ++VS  + ++ T   P            ++P SR+ S SA  T  +   R+G S
Sbjct: 192  PTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSA--TPLSSPARSGPS 249

Query: 1257 SRARSRAPGPRDTDDDEEEPDPYGFIVQTAEIAEIARLSQTLVKDVAILAQEIHDVAGDG 1316
            +R   RAP          +P P G  +Q     ++    +     +  L+          
Sbjct: 250  ARGTPRAPA------HPSQPKPKG--LQALRPPQVTPPRKDAAPALGPLSSSPLATPSPS 301

Query: 1317 DTLGSSEPAHSASLSNMPSTPASTISAREELVQRIPEASLNFQKVPP 1363
                 S P    +L + P+TP S   A   L     +A+ +F   PP
Sbjct: 302  APPSPSAPPSLQTLPSPPATPPS--QATTSLGSPTLQATHSFLPSPP 346


>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
          Length = 416

 Score = 56.6 bits (135), Expect = 2e-07
 Identities = 97/462 (20%), Positives = 141/462 (30%), Gaps = 101/462 (21%)

Query: 424 HSPSGDPKAD-KRRGPTPADRDRPSVPAPVQAGGRSSGPQRAGSLKREKTEERLGSPSPA 482
           + P G P    K +GP P   ++P  P P    G+  GP   G  K +      G P P 
Sbjct: 45  NKPQGPPSPPGKPQGPPPQGGNQPQGPPPPP--GKPQGPPPQGGNKPQ------GPPPPG 96

Query: 483 SRTPARPFGSVGRRSRLAQDFMAQCLRESSPAARPSPEKVPPVLPAPLTPHGTSPVGPPT 542
                 P G   R  R             SP  +P           P    G  P GPP 
Sbjct: 97  KPQGPPPQGDKSRSPR-------------SPPGKPQ---------GPPPQGGNQPQGPPP 134

Query: 543 PPPAPTDPQLTKARKQEEDDSLSDAGTYTIETEAQDTEVEEARKMIDQVFGVLESPELSR 602
           PP  P  P      K +             + +    + +   +      G  + P    
Sbjct: 135 PPGKPQGPPPQGGNKPQGPPPPG-------KPQGPPPQGDNKSRSSRSPPGKPQGP---- 183

Query: 603 ASSATFRPVIRGDRDESDDGGVAQRMALLQEFASRPLGAAPQAEHQGLPVPGSPGGQKWV 662
                  P   G++ +       +      +  ++P G  P  + QG P  G    Q   
Sbjct: 184 -------PPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQ--- 233

Query: 663 SRWASLADSYSDPGLTEDGLGRRGGEPEGSLPVRMRRRLPQLPSERADSPAGPESSRRSG 722
                   + S PG  +    + G +P+G  P   + + P  P +  + P GP    +  
Sbjct: 234 -------SARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGP--PPQGGNKPQGPPPPGKPQ 284

Query: 723 PGPPELDSEQPSRLFGQEELDPDSLSDASGSDGGRGPEPGVEPQDSRRRSPQEGPTWSRG 782
             PP+  S+  S         P          GG  P+    P    +  P +G    +G
Sbjct: 285 GPPPQGGSKSRS------SRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQG 338

Query: 783 RRSPRAPGEPTPASFFIGDQNGDAVLSRKPLAAPGDGEGLGQTAQPSPPARDGVYVSANG 842
              P  P  P P       Q G    SR   + PG  +G        PP ++G       
Sbjct: 339 PPPPGKPQGPPP-------QGGSK--SRSARSPPGKPQG--------PPQQEG------- 374

Query: 843 RMVIQLRPGRSPEPDGPAPAFLRQESFTKEPASGPPAPGKPP 884
                  P   P P G  P     +     PA  P  P +PP
Sbjct: 375 -----NNPQGPPPPAGGNP-----QQPQAPPAGQPQGPPRPP 406



 Score = 53.5 bits (127), Expect = 2e-06
 Identities = 65/270 (24%), Positives = 89/270 (32%), Gaps = 35/270 (12%)

Query: 637 RPLGAAPQAEH--QGLPVPGSPGGQKWVSRWASLADSYSDPGLTEDGLGRRGGEPEGSLP 694
           +P G  PQ  +  QG P PG P G        S + S S PG  +    + G +P+G  P
Sbjct: 138 KPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRS-SRSPPGKPQGPPPQGGNQPQGPPP 196

Query: 695 VRMRRRLPQLPSERADSPAGPESSRRSGPGPPELDSEQPSRLFGQEELDPDSLSDASGSD 754
              + + P  P +  + P GP    +    PP+ D++       Q    P          
Sbjct: 197 PPGKPQGP--PPQGGNKPQGPPPPGKPQGPPPQGDNKS------QSARSPPGKPQGPPPQ 248

Query: 755 GGRGPEPGVEPQDSRRRSPQEGPTWSRGRRSPRAPGEPTPASFFIGDQNGDAVLSR---- 810
           GG  P+    P    +  P +G    +G   P  P  P P       Q G    S     
Sbjct: 249 GGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPP-------QGGSKSRSSRSPP 301

Query: 811 -KPLAAPGDGEGLGQTAQPSPPARDGVYVSANGRMVIQLRPGRSPEPDGPAPAFLRQESF 869
            KP   P  G    Q   P P    G       +      PG+   P GP P    +   
Sbjct: 302 GKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGK---PQGPPPQGGSKSRS 358

Query: 870 TKEPASGPPAP---------GKPPHISSHP 890
            + P   P  P         G PP    +P
Sbjct: 359 ARSPPGKPQGPPQQEGNNPQGPPPPAGGNP 388



 Score = 52.0 bits (123), Expect = 4e-06
 Identities = 71/267 (26%), Positives = 94/267 (35%), Gaps = 54/267 (20%)

Query: 635 ASRPLGAAPQAEH--QGLPVP-GSPGGQKWVSRWASLADSYSDPGLTEDGLGRRGG---- 687
           A  P GA PQ  +  QG P P G P G     +  +       P     G   +GG    
Sbjct: 33  AGNPQGAPPQGGNKPQGPPSPPGKPQGPP--PQGGNQPQGPPPPPGKPQGPPPQGGNKPQ 90

Query: 688 ------EPEGSLPVRMRRRLPQLPSERADSPAGPESSRRSGPGPPELDSEQPSRLFGQEE 741
                 +P+G  P   + R P+ P  +   P     ++  GP PP    + P        
Sbjct: 91  GPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGP-------- 142

Query: 742 LDPDSLSDASGSDGGRGPEPGVEPQDSRRRSPQEGPTWSRGRRSPRAPGEPTPASFFIGD 801
                     G +  +GP P  +PQ      P +G   SR  RSP  PG+P       G+
Sbjct: 143 -------PPQGGNKPQGPPPPGKPQG----PPPQGDNKSRSSRSP--PGKPQGPPPQGGN 189

Query: 802 Q-NGDAVLSRKPLAAPGDG----EGLGQTAQPSPPARDGVYVSANGRMVIQLRPGRSPEP 856
           Q  G      KP   P  G    +G     +P  P   G   S + R      PG+   P
Sbjct: 190 QPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARS----PPGK---P 242

Query: 857 DGPAPAFLRQESFTKEPASGPPAPGKP 883
            GP P          +P   PP PGKP
Sbjct: 243 QGPPP------QGGNQPQGPPPPPGKP 263



 Score = 51.2 bits (121), Expect = 8e-06
 Identities = 98/432 (22%), Positives = 129/432 (29%), Gaps = 104/432 (24%)

Query: 705  PSERADSPAGPESSRRSGPGPPELDSEQPSRLFGQEELDPDSLSDASGSDGGRGPEPGVE 764
            P +  + P GP S      GPP     QP     Q    P          GG  P+ G  
Sbjct: 40   PPQGGNKPQGPPSPPGKPQGPPPQGGNQP-----QGPPPPPGKPQGPPPQGGNKPQ-GPP 93

Query: 765  PQDSRRRSPQEGPTWSRGRRSPRAPGEPTPASFFIGDQ-NGDAVLSRKPLAAPGDGEGLG 823
            P    +  P +G   SR  RSP  PG+P       G+Q  G      KP   P  G    
Sbjct: 94   PPGKPQGPPPQGDK-SRSPRSP--PGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKP 150

Query: 824  QTAQPSPPAR-DGVYVSANGRMVIQLRPGRSP--EPDGPAPAFLRQESFTKEPASGPPAP 880
            Q   P PP +  G     + +     R  RSP  +P GP P    Q      P   P  P
Sbjct: 151  QG--PPPPGKPQGPPPQGDNKS----RSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGP 204

Query: 881  GKPPHISSHPLLQDLAATRAARMDFHSQDTHLILKETETALAALEARLLSNSVDAECEGG 940
              PP                                                     +GG
Sbjct: 205  --PP-----------------------------------------------------QGG 209

Query: 941  STPR--PPEDALSGDSDVDTASTVSLRSGKSGPSPTTPQPLRAQKEMSPSPPAAQDPGGT 998
            + P+  PP     G        + S RS      P  P P    +   P PP  +  G  
Sbjct: 210  NKPQGPPPPGKPQGPPPQGDNKSQSARSPPG--KPQGPPPQGGNQPQGPPPPPGKPQGPP 267

Query: 999  ALVSAREQSSERQHHPLGPTDMGRGEPVRRSAI----------RRGHRPRGSLDWPSEER 1048
                 + Q       P GP   G G   R S            + G++P+G    P + +
Sbjct: 268  PQGGNKPQGPPPPGKPQGPPPQG-GSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQ 326

Query: 1049 GPVLAHLPSSDVMASNHETPEATGAGRLGSRRKPAAPPPSPAAREEQSRSSASSQKGPQA 1108
            GP     P      +  + P   G        KP  PPP   ++   +RS     +GP  
Sbjct: 327  GPP----PQG---GNKPQGPPPPG--------KPQGPPPQGGSKSRSARSPPGKPQGPPQ 371

Query: 1109 LTRSNSLSTPRP 1120
               +N    P P
Sbjct: 372  QEGNNPQGPPPP 383



 Score = 47.8 bits (112), Expect = 8e-05
 Identities = 89/382 (23%), Positives = 121/382 (31%), Gaps = 75/382 (19%)

Query: 414 PRKKRSQSFTHSPSGDPKADKRRGPTPADRDRPSVPAPVQAGGRSSGPQRAGSLKREKTE 473
           P+  +S+S   SP G P+     GP P   ++P  P P    G+  GP   G  K +   
Sbjct: 103 PQGDKSRS-PRSPPGKPQ-----GPPPQGGNQPQGPPPPP--GKPQGPPPQGGNKPQ--- 151

Query: 474 ERLGSPSPASRTPARPFGSVGRRSRLAQDFMAQCLRESSPAARPSPEKVPPVLPAPLTPH 533
              G P P       P G    RS              SP  +P           P    
Sbjct: 152 ---GPPPPGKPQGPPPQGDNKSRS------------SRSPPGKPQ---------GPPPQG 187

Query: 534 GTSPVGPPTPPPAPTDPQLTKARKQEEDDSLSDAGTYTIETEAQDTEVEEARKMIDQVFG 593
           G  P GPP PP  P  P      K +        G         D + + AR       G
Sbjct: 188 GNQPQGPPPPPGKPQGPPPQGGNKPQ---GPPPPGKPQGPPPQGDNKSQSARSPP----G 240

Query: 594 VLESPELSRASSATFRPVIRGDRDESDDGGVAQRMALLQEFASRPLGAAPQA--EHQGLP 651
             + P     +     P   G                      +P G  PQ   + QG P
Sbjct: 241 KPQGPPPQGGNQPQGPPPPPG----------------------KPQGPPPQGGNKPQGPP 278

Query: 652 VPGSPGGQKWVSRWASLADSYSDPGLTEDGLGRRGGEPEGSLPVRMRRRLPQLPSERADS 711
            PG P G       +    S S PG  +    + G +P+G  P   + + P  P +  + 
Sbjct: 279 PPGKPQGPP-PQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGP--PPQGGNK 335

Query: 712 PAGPESSRRSGPGPPELDSEQPSRLFGQEELDPDSLSDASGSDGGRGPEPG----VEPQD 767
           P GP    +    PP+  S+  SR        P       G++    P P      +PQ 
Sbjct: 336 PQGPPPPGKPQGPPPQGGSK--SRSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQA 393

Query: 768 SRRRSPQEGPTWSRGRRSPRAP 789
                PQ  P   +G R  R P
Sbjct: 394 PPAGQPQGPPRPPQGGRPSRPP 415



 Score = 31.6 bits (70), Expect = 6.2
 Identities = 30/121 (24%), Positives = 42/121 (34%), Gaps = 16/121 (13%)

Query: 136 EHTPYCEASNPR--PEKGDRRPGTEAASYRTPLYGQPSWWGEDDGSTLPDAQRQGEPY-- 191
           E +P   A NP+  P +G  +P    +    P    P    +  G   P  + QG P   
Sbjct: 26  EESPSLIAGNPQGAPPQGGNKPQGPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQG 85

Query: 192 ---------PERPKGPVQQDGELHGFRAPAEPQGCSFRREPSYFEIPTKETPQPSQPPEV 242
                    P +P+GP  Q  +    R+P  P G      P     P    P P +P   
Sbjct: 86  GNKPQGPPPPGKPQGPPPQGDK---SRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGP 142

Query: 243 P 243
           P
Sbjct: 143 P 143


>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 [Homo
            sapiens]
          Length = 2178

 Score = 55.8 bits (133), Expect = 3e-07
 Identities = 146/705 (20%), Positives = 227/705 (32%), Gaps = 125/705 (17%)

Query: 641  AAPQAEHQGLPVPGSPGGQKWVSRWASLADSYSDPGLTEDGLGRRGGE---PEGSLPVRM 697
            ++P+ +  G+ +    GG   +S+ A+        G    G  R  G+   P G+ P   
Sbjct: 311  SSPRQQGGGMMMGPGGGGAASLSKAAA--------GSAAGGFQRFAGQNQHPSGATPTLN 362

Query: 698  RRRLPQLPSERADSPAGPESSRRSGPGPPELDSEQPSRLFG------QEELDPDSLSDAS 751
            +      P  R+   + PE S  S P PP    +  +   G      Q         D  
Sbjct: 363  QLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMG 422

Query: 752  GSDGGRGPEPGVEPQDSR-RRSP-QEGPTWSRGRRSPRAP----------------GEPT 793
                   P      Q S    SP   GPT  R + SP  P                 +P 
Sbjct: 423  AQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQ 482

Query: 794  PASFFIGDQNGDAVLSRKPLA----APGDGEGLGQTAQPSPPARDGVYVSANGRMVIQLR 849
             +S + G   G     R P+      PG   G+    Q  PP      VS   +   Q  
Sbjct: 483  QSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQMPPQYGQQGVSGYCQQGQQPY 542

Query: 850  PGRSPEPDGPAP-----------AFLRQESFTKE---PASGPP-APGKPPHISSHPLLQD 894
              + P+P    P            +  Q+  ++E     S PP APGKP H         
Sbjct: 543  YSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNH--------- 593

Query: 895  LAATRAARMDFHSQDTHLILKETETALAALEARL----------LSNSVDAECEGGSTPR 944
                         +D +LI +E  ++L  L   +          LS++V A    GST  
Sbjct: 594  -------------EDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSA---SGSTSS 637

Query: 945  PPEDALSGDSDVDTASTVSLRSGKSGPSPT-TPQPLRAQKEMSPSPPAAQDPGGTALVSA 1003
              + +    S     ++  L S   GPSP+    P+ + +  S     A  PG       
Sbjct: 638  QGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQP 697

Query: 1004 REQSSERQHHP-LGPTDMGRGEPVRRSAIRRGHRPRGSLDWPSEERGPVLAHLPS--SDV 1060
                SE   HP L  + M    P  R  +    R      +  ++ GP ++  PS    +
Sbjct: 698  PGSQSESSSHPALSQSPM----PQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQM 753

Query: 1061 MASNHETPEATGAGRLGSRRKPAAP------PPSPAAREEQSRSSASSQKGPQALTRSNS 1114
             A      ++  +G  G +     P      PP+ +     S S      G  A  + + 
Sbjct: 754  HAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHG 813

Query: 1115 LSTPRPTRASRLRR------------ARLGDASDTEAADGERG--SLGNPEPVGRPAAEQ 1160
                +P  A  L R              +   + +     ++G   +G P P     A++
Sbjct: 814  QGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQE 873

Query: 1161 AKKLSRLDILAMPRKRAGSFTG--------TSDPEAAPARTSFSGRSVELCCASRKPTMA 1212
            A            + R GSF G        +S P + P   S S  + +    S  P M 
Sbjct: 874  AAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMV 933

Query: 1213 EARAVSRKAANTATTTGPRQPFSRARSGSARYTSTTQTPRAGSSS 1257
             + A S   A+  +    + P      G    T   ++    SSS
Sbjct: 934  NSSAASVGLADMMSPGESKLPLPLKADGKEEGTPQPESKSKKSSS 978


>gi|178557734 microtubule-associated protein tau isoform 6 [Homo
            sapiens]
          Length = 776

 Score = 55.5 bits (132), Expect = 4e-07
 Identities = 130/548 (23%), Positives = 197/548 (35%), Gaps = 112/548 (20%)

Query: 641  AAPQAEHQGLPV--PGSPGGQKWVSRWASLADSYS--------DPGLTEDGLGRRGGEPE 690
            + P AE    P+   G+PG Q        + +  +         P L ++  G    EPE
Sbjct: 68   STPTAEDVTAPLVDEGAPGKQAAAQPHTEIPEGTTAEEAGIGDTPSLEDEAAGHVTQEPE 127

Query: 691  GSLPVR---MRRRLP-----QLPSERADSPAGPESSRR-----SGPGPPELDSEQPS--- 734
                V+   +R   P     QL S    +P  PE  R      SG GP + +  + +   
Sbjct: 128  SGKVVQEGFLREPGPPGLSHQLMSGMPGAPLLPEGPREATRQPSGTGPEDTEGGRHAPEL 187

Query: 735  ---RLFGQEELDPDSLSDASGSDGGRGPEPGVEPQDSRRRSPQEGPT------------W 779
               +L G    +   L  A G +     E   E +D    SPQ+ P              
Sbjct: 188  LKHQLLGDLHQEGPPLKGAGGKERPGSKEEVDEDRDVDESSPQDSPPSKASPAQDGRPPQ 247

Query: 780  SRGRRSPRAPGEPTPASFFIGDQNGDAVLSRKPLAAPGDGEGLGQTAQPSPPARDGVYVS 839
            +  R +   PG P   +  +       V +  P + P DG  +G+      P     +V 
Sbjct: 248  TAAREATSIPGFPAEGAIPLPVDFLSKVSTEIPASEP-DGPSVGRAKGQDAPLEFTFHVE 306

Query: 840  AN--------------GRMVIQLRPGRSPEPDGPAPAFLRQESFTKEPASGPPAP---GK 882
                            GR      PG  PE  GP+     +E+   EP+   PA    GK
Sbjct: 307  ITPNVQKEQAHSEEHLGRAAFPGAPGEGPEARGPSLGEDTKEADLPEPSEKQPAAAPRGK 366

Query: 883  PPHISSHPLLQDLAATRAARMDFHSQD-THLILKETETALAALEARLLSN----SVDAEC 937
            P  +S  P L+       ARM   S+D T    K+ +T+  +  A+ L N    S     
Sbjct: 367  P--VSRVPQLK-------ARMVSKSKDGTGSDDKKAKTSTRS-SAKTLKNRPCLSPKHPT 416

Query: 938  EGGSTP--RPPEDALSGD--SDVDTASTVSLRSGKSG-----------------PSPTTP 976
             G S P  +P   A+  +  S     S+V+ R+G SG                 P    P
Sbjct: 417  PGSSDPLIQPSSPAVCPEPPSSPKHVSSVTSRTGSSGAKEMKLKGADGKTKIATPRGAAP 476

Query: 977  QPLRAQKEM----SPSPPAAQDPGGTALVSAREQSSERQHHPLGPTDMGRGEPVRRSAIR 1032
               + Q       + +PPA + P  +A      +  +R+  P GP    RGEP  +S  R
Sbjct: 477  PGQKGQANATRIPAKTPPAPKTPPSSA-----TKQVQRRPPPAGPRS-ERGEP-PKSGDR 529

Query: 1033 RGHRPRGSLDWP-SEERGPVLAHLPSSD--VMASNHETPEATGAGRLGSRRKPAAPPPSP 1089
             G+   GS   P S  R P L   P+ +   +A     P++  + +    R   AP P P
Sbjct: 530  SGYSSPGSPGTPGSRSRTPSLPTPPTREPKKVAVVRTPPKSPSSAK---SRLQTAPVPMP 586

Query: 1090 AAREEQSR 1097
              +  +S+
Sbjct: 587  DLKNVKSK 594


>gi|73476377 LBXCOR1 homolog [Homo sapiens]
          Length = 921

 Score = 55.5 bits (132), Expect = 4e-07
 Identities = 90/383 (23%), Positives = 129/383 (33%), Gaps = 62/383 (16%)

Query: 782  GRRSPRAPGEPTPASFFIGDQNGDAVLSRKPLAAPGDGEGLGQ-----TAQPSPPARDGV 836
            G   P    EP   S    ++   + LSR PL   G  E L          P PPAR G 
Sbjct: 487  GAPEPLDGAEPAKESGLGAEERCPSALSRGPLDEDGTDEALPPPLAPLPPPPPPPARKGS 546

Query: 837  YVSANGRMVIQLRPGRSPEPDGPAPAFLRQESFTKEPASGP-PAPGKPPHISSHPLLQDL 895
            YVSA        RP               +E++   PA GP P  G   ++S   L +  
Sbjct: 547  YVSA-------FRPVVKDTESIAKLYGSAREAYGAGPARGPGPGAGSGGYVSPDFLSEGS 599

Query: 896  AATRAARMDFHSQDTHLILKETETALAALEARLLSNSVDAECEGGSTPRPPEDALSGDSD 955
            ++  +A  D  + D                       VD E     + R P+D    D+ 
Sbjct: 600  SSYNSASPDVDTAD--------------------EPEVDVE-----SNRFPDDE---DAQ 631

Query: 956  VDT-ASTVSLRSGKSGPSPTTPQPLRAQKEMSPSPPAAQDPGGTALVSAREQSSERQHHP 1014
             +T  S  S   G  G  PT              PP+A   G     ++ +  S R    
Sbjct: 632  EETEPSAPSAGGGPDGEQPT-------------GPPSATSSGADGPANSPDGGSPRPRRR 678

Query: 1015 LGPTDMGR---GEPVRRSAIRRGHR--PRGSLDWPSEER-GPVLAHLPSSDVMASNHETP 1068
            LGP   GR   G+      +RR  R  P G   +   E  GP+    P+  V A   +  
Sbjct: 679  LGPPPAGRPAFGDLAAEDLVRRPERSPPSGGGGYELREPCGPLGGPAPAK-VFAPERDEH 737

Query: 1069 EATGAGRLGSRRKPAAPPPSPAAREEQSRSSASSQKGPQALTRSNSLSTPRPTRASRLRR 1128
              + A  LG        P +    +E + S A   +  ++     S+S P P    R   
Sbjct: 738  VKSAAVALGPAASYVCTPEAHEPDKEDNHSPADDLETRKSYPDQRSISQPSPANTDRGED 797

Query: 1129 ARLGDASDTEAADGERGSLGNPE 1151
                D + T   + +  +L   E
Sbjct: 798  GLTLDVTGTHLVEKDIENLAREE 820



 Score = 36.2 bits (82), Expect = 0.25
 Identities = 63/237 (26%), Positives = 84/237 (35%), Gaps = 58/237 (24%)

Query: 726 PELDSEQ---PSRLFGQEELDPDSLSDASGSDGGR--GPEPGVEP-QDSRRRSPQEGPTW 779
           PE+D E    P     QEE +P + S   G DG +  GP        D    SP  G   
Sbjct: 615 PEVDVESNRFPDDEDAQEETEPSAPSAGGGPDGEQPTGPPSATSSGADGPANSPDGGSPR 674

Query: 780 SRGRRSPRAPGEPTPASFFIGDQNGDAVLSRKPLAAPGDGEGLGQTAQPSPPARDGVYVS 839
            R R  P   G P       GD           LAA    E L +  + SPP+  G Y  
Sbjct: 675 PRRRLGPPPAGRPA-----FGD-----------LAA----EDLVRRPERSPPSGGGGY-- 712

Query: 840 ANGRMVIQLRPGRSPEPDGPAPAFLRQESFTKEPASGPPAPGKPPHISSHPLLQDLAATR 899
                  +LR    P   GPAPA +              AP +  H+ S  +    AA+ 
Sbjct: 713 -------ELREPCGP-LGGPAPAKVF-------------APERDEHVKSAAVALGPAASY 751

Query: 900 AARMDFH---SQDTHLILKETETALAALEARLLSNSVDAECEGGSTPRPPEDALSGD 953
               + H    +D H    + ET  +  + R +S    A  + G      ED L+ D
Sbjct: 752 VCTPEAHEPDKEDNHSPADDLETRKSYPDQRSISQPSPANTDRG------EDGLTLD 802


>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
          Length = 1464

 Score = 55.1 bits (131), Expect = 5e-07
 Identities = 123/491 (25%), Positives = 157/491 (31%), Gaps = 75/491 (15%)

Query: 712  PAGPESSRRSGPGPPELDSEQPSRLFGQEELDPDSLSDASGSDGGRGPE--PGVEPQDSR 769
            P GP S  R  PGPP     Q  +    E  +P     ASG  G RGP   PG    D  
Sbjct: 180  PMGP-SGPRGLPGPPGAPGPQGFQGPPGEPGEPG----ASGPMGPRGPPGPPGKNGDDGE 234

Query: 770  RRSPQEGPTWSRGRRSPRAPGEPTPASFFIGDQNGDAVLSRKPLA----APGDGEGLGQT 825
               P        GR   R P  P  A    G      +   +  +    A GD    G  
Sbjct: 235  AGKP--------GRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPK 286

Query: 826  AQPSPPARDGVYVSANGRMVIQLRPGRSPEPDGPAPAFLRQESFTKEPASGPPAPGKPPH 885
             +P  P  +G    A G+M  +  PG    P  P PA  R        A+GPP P  P  
Sbjct: 287  GEPGSPGENG----APGQMGPRGLPGERGRPGAPGPAGARGNDGATG-AAGPPGPTGPAG 341

Query: 886  ISSHPLLQDLAATRAARMDFHSQDTHLILKETETALAALEARLLSNSVDAECEGGSTPRP 945
                P           +    S+    +  E      A  A    N        G+  +P
Sbjct: 342  PPGFPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNP-------GADGQP 394

Query: 946  PEDALSGDSDVDTASTVSLRSGKSGPSPTTPQPLRAQKEMSPSPPAAQDPGGTALVSARE 1005
                 +G   +  A       G SGP      P    K  S  P A    G T   +  E
Sbjct: 395  GAKGANGAPGIAGAPGFPGARGPSGPQGPGGPP--GPKGNSGEPGAPGSKGDTG--AKGE 450

Query: 1006 QSSERQHHPLGPTDMGRGEPVRRSAIRRGHRPRGSLDWPSEERGPVLAHLPSSDVMAS-- 1063
                    P GP     GE  +R A R    P G    P E  GP     P +D +A   
Sbjct: 451  PGPVGVQGPPGPA----GEEGKRGA-RGEPGPTGLPGPPGERGGPGSRGFPGADGVAGPK 505

Query: 1064 ----NHETPEATG-------AGRLGSRRKPAAP-----PPSPAAREEQSRSSASSQKG-- 1105
                   +P   G       AGR G    P A      P SP    +      + Q G  
Sbjct: 506  GPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRP 565

Query: 1106 -----PQALTRSNSLSTPRPTRASRLRRARLGD--------ASDTEAADGERGSLGNPEP 1152
                 P A  ++  +  P P  A+     + G+        A      DGE G+ G P P
Sbjct: 566  GPPGPPGARGQAGVMGFPGPKGAAG-EPGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGP 624

Query: 1153 VGRPAAEQAKK 1163
             G PA E+ ++
Sbjct: 625  AG-PAGERGEQ 634



 Score = 53.9 bits (128), Expect = 1e-06
 Identities = 140/589 (23%), Positives = 171/589 (29%), Gaps = 99/589 (16%)

Query: 640  GAAPQAEHQGLPVPGSPGGQKWVSRWASLADSYSDPGLT----EDGL-GRRGGE-PEGSL 693
            G A     QGLP P  P G+        +      PG +    E G  G RG + P G  
Sbjct: 635  GPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPA 694

Query: 694  PVRMRRRLPQLPSERADSPAGPESSRRSGPGPPELDSEQ-----PSRLFGQEELDPDSLS 748
              R     P     + D+ A      +  PG   +  E+     P     + +  P    
Sbjct: 695  GPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDAGPKGAD 754

Query: 749  DASGSDGGRG-------PEPGVEPQDSRRRSPQ--EGPTWSRGRRSPRA-PGEPTPASFF 798
             + G DG RG       P P   P D     P    GPT +RG    R  PG P PA  F
Sbjct: 755  GSPGKDGVRGLTGPIGPPGPAGAPGDKGESGPSGPAGPTGARGAPGDRGEPGPPGPAG-F 813

Query: 799  IGDQNGDAVLSRKPLAAPGDGEGLGQTAQPSP---------------PARDGV------- 836
             G    D     K    PGD    G    P P               P   G        
Sbjct: 814  AGPPGADGQPGAK--GEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGARGSAGPP 871

Query: 837  ----YVSANGRMVIQLRPGRSPEPDGPAPAFLRQESFTK---EPAS-----GPPAPGKPP 884
                +  A GR+      G +  P  P PA        +    PA      GPP P  P 
Sbjct: 872  GATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGPRGETGPAGRPGEVGPPGPPGPA 931

Query: 885  HISSHPLLQDLAATRAARMDFHSQDTHLILKETETALAALEARLLSNSVDAECEGGSTPR 944
                 P     A                    T         R +        E G    
Sbjct: 932  GEKGSPGADGPAGAPG----------------TPGPQGIAGQRGVVGLPGQRGERGFPGL 975

Query: 945  PPEDALSGDSDVDTASTVSLRSGKSGPSPTTPQPLRAQKEMSPSPPAAQDPGGTALVSAR 1004
            P      G      AS      G  GP      P  + +E +P    +    G+      
Sbjct: 976  PGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGAEGSPGRDGSPGAKGD 1035

Query: 1005 EQSSERQHHPLGPTDMGRGEPVRRSAIRRGHRPRGSLDWPSEERGPVLAHLPS--SDVMA 1062
               +     P  P   G   PV   A + G R       P+   GPV A  P+       
Sbjct: 1036 RGETGPAGPPGAPGAPGAPGPV-GPAGKSGDRGETGPAGPAGPVGPVGARGPAGPQGPRG 1094

Query: 1063 SNHETPEATGAGRLGSR-----RKPAAPPPSPAAREEQSRSSASSQKGPQALTRSNSLST 1117
               ET E    G  G R     + P  PP SP    EQ  S AS   GP+      S   
Sbjct: 1095 DKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPG---EQGPSGASGPAGPRG--PPGSAGA 1149

Query: 1118 PRPTRASRL--------RRARLGDASDTEAADGERGSLGNPEPVGRPAA 1158
            P     + L         R R GDA       G  G  G P P G P+A
Sbjct: 1150 PGKDGLNGLPGPIGPPGPRGRTGDAGPV----GPPGPPGPPGPPGPPSA 1194



 Score = 48.5 bits (114), Expect = 5e-05
 Identities = 126/517 (24%), Positives = 155/517 (29%), Gaps = 102/517 (19%)

Query: 683  GRRGGEPEGSLPVRMRRRLPQLPSERADSPAGPESSRRSGPGPPELDSE-QPSRLFGQEE 741
            G RG  P G      R  +P  P      P GP       PGPP L     P   +G +E
Sbjct: 118  GPRG--PRGPAGPPGRDGIPGQPG--LPGPPGPPGP----PGPPGLGGNFAPQLSYGYDE 169

Query: 742  LDPDSLS-----DASGSDGGRGPEPGVEPQDSRRRSPQEGPTWSRGRRSPRAPGEPTPAS 796
                 +S       SG  G  GP     PQ  +    + G   + G   PR P  P    
Sbjct: 170  KSTGGISVPGPMGPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPP--- 226

Query: 797  FFIGDQNGDAVLSRKP-----------------------------------LAAPGDGEG 821
                 +NGD   + KP                                     A GD   
Sbjct: 227  ----GKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGP 282

Query: 822  LGQTAQPSPPARDGVYVSANGRMVIQLRPGRSPEPDGPAPAFLRQESFTKEPASGPPAPG 881
             G   +P  P  +G    A G+M  +  PG    P  P PA  R        A+GPP P 
Sbjct: 283  AGPKGEPGSPGENG----APGQMGPRGLPGERGRPGAPGPAGARGND-GATGAAGPPGPT 337

Query: 882  KPPHISSHPLLQDLAATRAARMDFHSQDTHLILKETETALAALEARLLSNSVDAECEGGS 941
             P      P           +    S+    +  E      A  A    N        G+
Sbjct: 338  GPAGPPGFPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNP-------GA 390

Query: 942  TPRPPEDALSGDSDVDTASTVSLRSGKSGPSPTTPQPLRAQKEMSPSPPAAQDPGGTALV 1001
              +P     +G   +  A       G SGP      P    K  S  P A    G T   
Sbjct: 391  DGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPGGPP--GPKGNSGEPGAPGSKGDTG-- 446

Query: 1002 SAREQSSERQHHPLGPTDMGRGEPVRRSAIRRGHRPRGSLDWPSEERGPVLAHLPSSDVM 1061
            +  E        P GP     GE  +R A R    P G    P E  GP     P +D +
Sbjct: 447  AKGEPGPVGVQGPPGPA----GEEGKRGA-RGEPGPTGLPGPPGERGGPGSRGFPGADGV 501

Query: 1062 ASNHETPEATGAGRLGSRRKPAAPPPSPAAREEQSRSSASSQKGPQALTRSNSLSTPRPT 1121
            A     P+   AG  GS   PA P  SP    E  R   +   G + LT   S  +P P 
Sbjct: 502  AG----PKGP-AGERGS-PGPAGPKGSPG---EAGRPGEAGLPGAKGLT--GSPGSPGP- 549

Query: 1122 RASRLRRARLGDASDTEAADGERGSLGNPEPVGRPAA 1158
                                G  G  G P P G P A
Sbjct: 550  -------------DGKTGPPGPAGQDGRPGPPGPPGA 573



 Score = 46.6 bits (109), Expect = 2e-04
 Identities = 182/820 (22%), Positives = 242/820 (29%), Gaps = 148/820 (18%)

Query: 428  GDPKADKRRGPT--PADRDRPSVPAPVQAGGRSSGPQRAGSLKREKTEERLGSP----SP 481
            G+  A  + GP   P +R RP  P P  A G       AG           G P    + 
Sbjct: 293  GENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAK 352

Query: 482  ASRTPARPFGSVGRRSRLAQDFMAQCLRESSPAARPSPE---------KVPPVLPAPLTP 532
                P  P GS G +    +         + PA  P  +           P +  AP  P
Sbjct: 353  GEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFP 412

Query: 533  HGTSPVGPPTP--PPAPTDPQLTKARKQEEDDSLSDAGTYTIETEAQDTEVEEARKMIDQ 590
                P GP  P  PP P            + D+ +      +  +       E  K    
Sbjct: 413  GARGPSGPQGPGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKR--- 469

Query: 591  VFGVLESPELSRASSATFRPVIRGDRDESDDGGVAQRMALLQEFASRPLGAAPQAEHQGL 650
              G    P        T  P   G+R     GG   R     +  + P G A +    G 
Sbjct: 470  --GARGEP------GPTGLPGPPGER-----GGPGSRGFPGADGVAGPKGPAGERGSPGP 516

Query: 651  PVP-GSPG-----GQKWVSRWASLADSYSDPGLTEDGL----------GRRGGEPEGSLP 694
              P GSPG     G+  +     L  S   PG   DG           GR G  P G   
Sbjct: 517  AGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPG--PDGKTGPPGPAGQDGRPG--PPGPPG 572

Query: 695  VRMRRRLPQLPSERADSPAGPESSRRSGPGPP----------ELDSEQPSRLFG----QE 740
             R +  +   P  +  +    ++  R  PGPP          E  ++ P    G    + 
Sbjct: 573  ARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERG 632

Query: 741  ELDPDSLSDASGSDGGRGPEPGVEPQDSRRRSPQE----GPTWSRGRRSPRAPGE----- 791
            E  P       G  G  GP PG   +   +  P +    GP+ +RG R    PGE     
Sbjct: 633  EQGPAGSPGFQGLPGPAGP-PGEAGKPGEQGVPGDLGAPGPSGARGERG--FPGERGVQG 689

Query: 792  -PTPASFFIGDQNGDAVLSRKPLAAPGDGEGLGQTAQPSPPARDGVYVSANGRMVIQLRP 850
             P PA              R    APG+    G    P  P   G    A G   +Q  P
Sbjct: 690  PPGPAG------------PRGANGAPGNDGAKGDAGAPGAPGSQG----APG---LQGMP 730

Query: 851  GRSPEPDGPAPAFLRQESFTK----EPAS----------GPPAPGKPPHISSHPLLQDLA 896
            G       P P   R ++  K     P            GPP P   P           A
Sbjct: 731  GERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGESGPSGPA 790

Query: 897  ---ATRAARMDFHSQDTHLILKETETALAALEARLLSNSVDAECEGGSTPRPPEDALSGD 953
                 R A  D                 A  +        DA  +G + P  P       
Sbjct: 791  GPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPP 850

Query: 954  SDVDTASTVSLRS--GKSGPSPTTPQPLRAQKEMSPSPPAAQDPGGTALVSAREQSSERQ 1011
              +        +   G +GP   T  P  A +   P P     P G    + +E      
Sbjct: 851  GPIGNVGAPGAKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEG----- 905

Query: 1012 HHPLGPTDMGRGEPVRRSAIRRGHRPRGSLDWPSEERGPVLAHLPSSDVMASNHETPEAT 1071
                G    G   P  R        P G    P+ E+G      P +D  A    TP   
Sbjct: 906  ----GKGPRGETGPAGRPGEVGPPGPPG----PAGEKGS-----PGADGPAGAPGTPGPQ 952

Query: 1072 G----------AGRLGSRRKPAAPPPSPAAREEQSRSSASSQKGPQALTRSNSLSTPRPT 1121
            G           G+ G R  P  P PS     +Q  S AS ++GP        L+ P P 
Sbjct: 953  GIAGQRGVVGLPGQRGERGFPGLPGPS-GEPGKQGPSGASGERGPPGPMGPPGLAGP-PG 1010

Query: 1122 RASRLRRARLGDASDTEAADGERGSLGNPEPVGRPAAEQA 1161
             + R        +   + + G +G  G   P G P A  A
Sbjct: 1011 ESGREGAPGAEGSPGRDGSPGAKGDRGETGPAGPPGAPGA 1050



 Score = 41.2 bits (95), Expect = 0.008
 Identities = 63/223 (28%), Positives = 82/223 (36%), Gaps = 36/223 (16%)

Query: 418  RSQSFTHSPSGDPKADKRRGPT-PADR--DR----PSVPA----PVQAGGRSSGPQRAGS 466
            R ++    P G P A    GP  PA +  DR    P+ PA    PV A G  +GPQ    
Sbjct: 1036 RGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGPVGARG-PAGPQGPRG 1094

Query: 467  LKREKTEE-----RLGSPSPASRTPARPFGSVGRRSRLAQDFMAQCLRESSPAARPSPEK 521
             K E  E+     +        + P  P GS G +        A        A  P  + 
Sbjct: 1095 DKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPPGSAGAPGKDG 1154

Query: 522  VPPVLPAPLTPHG-------TSPVGPPTPPPAPTDPQLTKA------RKQEEDDSLSDAG 568
            +   LP P+ P G         PVGPP PP  P  P    A        Q   +   D G
Sbjct: 1155 LNG-LPGPIGPPGPRGRTGDAGPVGPPGPPGPPGPPGPPSAGFDFSFLPQPPQEKAHDGG 1213

Query: 569  TYTIETEA-----QDTEVEEARKMIDQVFGVLESPELSRASSA 606
             Y    +A     +D EV+   K + Q    + SPE SR + A
Sbjct: 1214 RYYRADDANVVRDRDLEVDTTLKSLSQQIENIRSPEGSRKNPA 1256



 Score = 37.0 bits (84), Expect = 0.15
 Identities = 121/534 (22%), Positives = 161/534 (30%), Gaps = 123/534 (23%)

Query: 419  SQSFTHSPSGDPKADKRRGPT-PADRD-RPSVPAPVQAGGRSS-----GPQRAGSLKREK 471
            ++  T SP G P  D + GP  PA +D RP  P P  A G++      GP+ A     + 
Sbjct: 537  AKGLTGSP-GSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKA 595

Query: 472  TEERLGSP----SPASRT----------PARPFGSVGRRSRLAQDFMAQCLRESSP---A 514
             E  +  P     PA +           PA P G  G +              + P   A
Sbjct: 596  GERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEA 655

Query: 515  ARPSPEKVPPVLPAPLTPHGTSPVGPPTP-----PPAPTDPQLTKARKQEEDDSLSDAGT 569
             +P  + VP  L AP         G P       PP P  P+         D +  DAG 
Sbjct: 656  GKPGEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGN-DGAKGDAGA 714

Query: 570  YTIETEA-----QDTEVEEARKMIDQVFGVLESPELSRASSATFRPVIRG---------- 614
                        Q    E     +    G         A  +  +  +RG          
Sbjct: 715  PGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGP 774

Query: 615  -----DRDESDDGGVAQRMALLQEFASRPLGAAPQAEHQGLPVPGSPGGQKWVSRWASLA 669
                 D+ ES   G A            P GA      +G P P  P G      +A   
Sbjct: 775  AGAPGDKGESGPSGPAG-----------PTGARGAPGDRGEPGPPGPAG------FAGPP 817

Query: 670  DSYSDPGLTEDGLGRRGGEPEGSLPVRMRRRLPQLPSERADSPAGPESSRRSGP------ 723
             +   PG   +  G  G + +   P       P  P     +P    +   +GP      
Sbjct: 818  GADGQPGAKGEP-GDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGARGSAGPPGATGF 876

Query: 724  -------GPPELDSEQPSRLFGQEELDPDSLSDASGSDGGRGPEPGVEPQDSRRRSPQEG 776
                   GPP      PS   G     P      +G +GG+GP              + G
Sbjct: 877  PGAAGRVGPPG-----PSGNAG-----PPGPPGPAGKEGGKGPR------------GETG 914

Query: 777  PTWSRGRRSPRAPGEPTPASFFIGDQNGDAVLSRKPLAAPGDGEGLGQTAQPSPPARDGV 836
            P    G   P  PG P PA    G++      +  P  APG     G   Q       G 
Sbjct: 915  PAGRPGEVGP--PGPPGPA----GEKGSPG--ADGPAGAPGTPGPQGIAGQRGVVGLPG- 965

Query: 837  YVSANGRMVIQLRPGRSPEPDGPAPAFLRQESFTKEPASGPPAPGKPPHISSHP 890
                 G       PG S EP    P+    E        GPP P  PP ++  P
Sbjct: 966  ---QRGERGFPGLPGPSGEPGKQGPSGASGE-------RGPPGPMGPPGLAGPP 1009



 Score = 36.6 bits (83), Expect = 0.19
 Identities = 70/302 (23%), Positives = 94/302 (31%), Gaps = 58/302 (19%)

Query: 608 FRPVIRGDRDESDDGGVAQRMALLQEFASRPLGAAPQAEHQGLP-VPGSPGGQKWVSRWA 666
           F P +    DE   GG++            P+G +     +GLP  PG+PG Q +     
Sbjct: 159 FAPQLSYGYDEKSTGGIS---------VPGPMGPSGP---RGLPGPPGAPGPQGFQGPPG 206

Query: 667 SLADSYSDPGLTEDGL----GRRGGEPEGSLPVRMRRRLPQLPSERADSPA-----GPES 717
              +  +   +   G     G+ G + E   P R   R P  P      P      G + 
Sbjct: 207 EPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKG 266

Query: 718 SRR----------SGPGPPELDSEQPSRLFGQEELDPDSLSDASGSDGGRGPEPGVEPQD 767
            R           +GP  P+ +   P       ++ P  L    G  G  GP  G    D
Sbjct: 267 HRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPGP-AGARGND 325

Query: 768 SRRRSPQEGPTWSRGRRSPRAPGEPTPASFFIGDQNGDAVLSRKPLAAPGDGEGLGQTAQ 827
                   G T + G   P  P  P      +G   G+A     P    G     G   +
Sbjct: 326 --------GATGAAGPPGPTGPAGPPGFPGAVG-AKGEA----GPQGPRGSEGPQGVRGE 372

Query: 828 PSPPARDGVYVSANGRMVIQLRPGRSPEPDGP----APAFLRQESFT-KEPASGPPAPGK 882
           P PP   G    A         PG   +P       AP       F      SGP  PG 
Sbjct: 373 PGPPGPAGAAGPAG-------NPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPGG 425

Query: 883 PP 884
           PP
Sbjct: 426 PP 427



 Score = 34.7 bits (78), Expect = 0.74
 Identities = 27/83 (32%), Positives = 31/83 (37%), Gaps = 2/83 (2%)

Query: 717  SSRRSGPGPPELDSEQ-PSRLFGQE-ELDPDSLSDASGSDGGRGPEPGVEPQDSRRRSPQ 774
            S  +  PGPP    EQ PS   G      P   + A G DG  G    + P   R R+  
Sbjct: 1114 SGLQGPPGPPGSPGEQGPSGASGPAGPRGPPGSAGAPGKDGLNGLPGPIGPPGPRGRTGD 1173

Query: 775  EGPTWSRGRRSPRAPGEPTPASF 797
             GP    G   P  P  P  A F
Sbjct: 1174 AGPVGPPGPPGPPGPPGPPSAGF 1196


>gi|157785645 SPEG complex locus [Homo sapiens]
          Length = 3267

 Score = 54.7 bits (130), Expect = 7e-07
 Identities = 150/605 (24%), Positives = 208/605 (34%), Gaps = 96/605 (15%)

Query: 685  RGGEPEGSLPVRMRRRLPQLPSERADSPAGPESSRRSGPGPPELDSEQPSRLFGQEELDP 744
            RGG  EG    R++    +L         GPE  + SG   P L+S       G    DP
Sbjct: 2055 RGGLGEGEYAQRLQALRQRLLR------GGPEDGKVSGLRGPLLES------LGGRARDP 2102

Query: 745  DSLSDASGSDGGRGPEPGVEPQDSRRRSPQEGPTWSRGRRSPRAPGEPTPASFFIGDQNG 804
              ++ A+ S+     +P +E      R  Q+  ++S+G   PR       A   I     
Sbjct: 2103 -RMARAASSEAAPHHQPPLE-----NRGLQKSSSFSQGEAEPRGRHRRAGAPLEIPV--- 2153

Query: 805  DAVLSRKPLAAPGDGEGLGQTAQPSPPARDGVYVSANGRMVIQLRPGRSPEPDGPAPAFL 864
             A L  + L        L + AQPS PAR                   +P+P  P  A  
Sbjct: 2154 -ARLGARRLQESPSLSALSE-AQPSSPARPS-----------------APKPSTPKSA-- 2192

Query: 865  RQESFTKEPASGPPAPGKPPHISSHPLLQDLAATRAARMDFHSQDTHLILKETETALAAL 924
               + T   A  PPAP      +  P  + + A++ A      Q   L L      + +L
Sbjct: 2193 EPSATTPSDAPQPPAPQPAQDKAPEPRPEPVRASKPAPPPQALQTLALPLTPYAQIIQSL 2252

Query: 925  EARLLSNSVDAECEGGSTPRPPEDALSGDSDVDTASTVSLRSGKSGPSPTTPQPLRAQKE 984
            +   LS       +G + P P E           AS       K  PS   P P+ A+K 
Sbjct: 2253 Q---LSGHAQGPSQGPAAP-PSEPKPHAAVFARVASPPPGAPEKRVPSAGGP-PVLAEKA 2307

Query: 985  MSPSPPAAQDPGGTALVSAREQSSERQHHPLGPTDMGRGEPVRRSAIRRGHRPRGSLDWP 1044
              P+ P    PG +   S     SE            + +  R S +  G R        
Sbjct: 2308 RVPTVPPR--PGSSLSSSIENLESEAVFE-------AKFKRSRESPLSLGLRLLSRS--R 2356

Query: 1045 SEERGPVLAHLPSSDVMASNHETPEATGAGRLGSRRKPAAPPPSPAAREEQSRSSASSQK 1104
            SEERGP         +                  R  PA  P     R E+SRS    + 
Sbjct: 2357 SEERGPFRGAEEEDGIY-----------------RPSPAGTPLELVRRPERSRSVQDLRA 2399

Query: 1105 -GPQALTRSNSLSTPRPTRASRLRRARLGDASDTEAADGERGSLGNPEPVGRPAAEQAKK 1163
             G   L R  SLS  +  R  R   A+   A +    DGE  S G     G P     ++
Sbjct: 2400 VGEPGLVRRLSLSLSQ--RLRRTPPAQRHPAWEARGGDGE-SSEGGSSARGSPVLAMRRR 2456

Query: 1164 LS-RLDILAMPRKRAGSFTGTSDPEAAPARTSFSGRSVELCCASRKPTMAEARAVSRKAA 1222
            LS  L+ L+   +R+GS   + D   A      SGRS  L    R+ T +E  ++ R   
Sbjct: 2457 LSFTLERLSSRLQRSGS---SEDSGGA------SGRSTPLFGRLRRAT-SEGESLRRLGL 2506

Query: 1223 ---NTATTTGPRQPFSRARSGSARYTSTTQTPRAGSSSRARSRAPGPRDTDDDEEEPDPY 1279
                 A   G   P + +    A  TS +  P     SR+R R    R   D    P   
Sbjct: 2507 PHNQLAAQAGATTPSAESLGSEASATSGSSAP---GESRSRLRWGFSRPRKDKGLSPPNL 2563

Query: 1280 GFIVQ 1284
               VQ
Sbjct: 2564 SASVQ 2568



 Score = 45.4 bits (106), Expect = 4e-04
 Identities = 96/427 (22%), Positives = 147/427 (34%), Gaps = 87/427 (20%)

Query: 945  PPEDALSGDSDVDTASTVSLRSGKSGPSPTTPQPLRAQKEMSPSPPAAQDPGGTALVSAR 1004
            PP   LS  SD +      L        P+ P+PL  Q E S S  +  D          
Sbjct: 1913 PPSGGLSSSSDSEEEELEEL--------PSVPRPL--QPEFSGSRVSLTD---------- 1952

Query: 1005 EQSSERQHHPLGPTDMGRGEPVRRSAIRRGHRPRGSLDWPSEERGPVL-AHLPSSDVMAS 1063
                  +   LG  + G   P               +DW  + R P      PS + + S
Sbjct: 1953 ---IPTEDEALGTPETGAATP---------------MDWQEQGRAPSQDQEAPSPEALPS 1994

Query: 1064 NHETPEATGAGRLGSRRKPAAPPPSPAAREEQSRSSASSQKGPQALTRS--NSLSTPRPT 1121
              + P A  + R G  R+ +            S  SA  + GP+ L R    + S   P 
Sbjct: 1995 PGQEPAAGASPRRGELRRGS------------SAESALPRAGPRELGRGLHKAASVELPQ 2042

Query: 1122 R------ASRLRRARLGDASDTEAADGERGSL--GNPEPVGRPAAEQAKKLSRLDILAMP 1173
            R      A+RL R  LG+    +     R  L  G PE  G+ +  +   L  L   A  
Sbjct: 2043 RRSPSPGATRLARGGLGEGEYAQRLQALRQRLLRGGPED-GKVSGLRGPLLESLGGRARD 2101

Query: 1174 RKRAGSFTGTSDPEAAPA--------RTSFSGRSVELCCASRKPTMAEARAVSRKAAN-- 1223
             + A + +  + P   P          +SFS    E     R+        V+R  A   
Sbjct: 2102 PRMARAASSEAAPHHQPPLENRGLQKSSSFSQGEAEPRGRHRRAGAPLEIPVARLGARRL 2161

Query: 1224 ----TATTTGPRQPFSRARSGSARYTSTTQTPRAGSSSRARSRAPGPRDTDDDEEEPDPY 1279
                + +     QP S AR  + + ++      + ++     + P P+   D   EP P 
Sbjct: 2162 QESPSLSALSEAQPSSPARPSAPKPSTPKSAEPSATTPSDAPQPPAPQPAQDKAPEPRPE 2221

Query: 1280 GFIVQTAEIAEIARLSQTLVKDVAILAQEIHDVAGDGDTLGSSE-PA--------HSASL 1330
               V+ ++ A   +  QTL   +   AQ I  +   G   G S+ PA        H+A  
Sbjct: 2222 P--VRASKPAPPPQALQTLALPLTPYAQIIQSLQLSGHAQGPSQGPAAPPSEPKPHAAVF 2279

Query: 1331 SNMPSTP 1337
            + + S P
Sbjct: 2280 ARVASPP 2286



 Score = 44.3 bits (103), Expect = 0.001
 Identities = 128/508 (25%), Positives = 173/508 (34%), Gaps = 93/508 (18%)

Query: 427 SGDPKADKRRGPTPADRDRPSVPAPVQAGGRSSGPQRAG--SLKREKTEERLGSP--SPA 482
           SG    ++  G     R  P  P   QA G  +GP+  G   L R      +G+   S  
Sbjct: 190 SGQTVLEQEAGSGGGTRRLPGSPRQAQATG--AGPRHLGVEPLVRASRANLVGASWGSED 247

Query: 483 SRTPARP-FGSV-----GRRSRLAQDFMAQCLRESSPAARPS--------PEKVPP---- 524
           S + A   +GS      GR   +        LR   P  +P         P + PP    
Sbjct: 248 SLSVASDLYGSAFSLYRGRALSIHVSVPQSGLRREEPDLQPQLASEAPRRPAQPPPSKSA 307

Query: 525 VLPAPLTPHGT-SPVGPPTPPPA-PTDPQ------------LTKARKQEEDDSLSDAGTY 570
           +LP P    G  SP GPP  P A PT P              T+ ++ ++  S   +   
Sbjct: 308 LLPPPSPRVGKRSPPGPPAQPAATPTSPHRRTQEPVLPEDTTTEEKRGKKSKSSGPSLAG 367

Query: 571 TIETEAQDTEVEEARKMIDQVFGVLESPELSRASSAT-----FRPVIRGDRDESDDGG-- 623
           T E+  Q T + EA   +  +     SP L RA S       F    R   + SD     
Sbjct: 368 TAESRPQ-TPLSEASGRLSALG---RSPRLVRAGSRILDKLQFFEERRRSLERSDSPPAP 423

Query: 624 ----VAQRMALLQEFASRPLGA---APQAEHQGLPVPGSPGGQK--WVSRWASLADSYSD 674
               V  R A   E      GA    P A  + L  PGS   ++  +  + ASL +    
Sbjct: 424 LRPWVPLRKARSLEQPKSERGAPWGTPGASQEELRAPGSVAERRRLFQQKAASLDERTRQ 483

Query: 675 PGLTED-------GLGRRGGEPEGSLPVR----MRRRLPQLPSERADS-------PAGPE 716
                D        LGR          VR    +R  L + PS R          P+ P+
Sbjct: 484 RSPASDLELRFAQELGRIRRSTSREELVRSHESLRATLQRAPSPREPGEPPLFSRPSTPK 543

Query: 717 SSRRSGPGPPELDSEQPSRLFGQEELDPDSLSDASGSDGGRGPEPGVEPQDSRRRSPQEG 776
           +SR   P   +  S   +   G E   P S   A  ++ G GP+  V      RR  Q  
Sbjct: 544 TSRAVSPAAAQPPSPSSAEKPGDEPGRPRSRGPAGRTEPGEGPQQEV------RRRDQFP 597

Query: 777 PTWSRGRRSPRAPGEPTPASFFIGDQNGDAVLSRKPLA-----APGDGEGLGQTAQPSPP 831
            T SR  +  R+P  P  A              R+P A      P    GL   A P   
Sbjct: 598 LTRSRAIQECRSPVPPPAADPPEARTKAPPGRKREPPAQAVRFLPWATPGLEGAAVPQTL 657

Query: 832 ARDGVYVSANGRMVIQLRPGRSPEPDGP 859
            ++     A  R+       R PE DGP
Sbjct: 658 EKNRAGPEAEKRL------RRGPEEDGP 679



 Score = 36.6 bits (83), Expect = 0.19
 Identities = 46/186 (24%), Positives = 69/186 (37%), Gaps = 33/186 (17%)

Query: 718  SRRSGPGPPELDSEQPSRLFGQEELDPDSLSDASGSDGGRGPEPGVEPQDSRRRSPQEGP 777
            + R+G GP    SE   ++F +   D  ++  A+  +      P        R  P + P
Sbjct: 2751 ANRAGQGPFSNSSE---KVFVRGTQDSSAVPSAAHQEAPVTSRPA-------RARPPDSP 2800

Query: 778  TWSRGRRSPRAPGEPTPASFFIGDQN-----GDAVLSRK-----PLAAPGDGEGLGQTAQ 827
            T       P AP  PTP S  +   +       A+ S K     P   P    GL Q A+
Sbjct: 2801 T---SLAPPLAPAAPTPPSVTVSPSSPPTPPSQALSSLKAVGPPPQTPPRRHRGL-QAAR 2856

Query: 828  PSPPARDGVYVSANGRMVIQLR-----PGRSPEPDGPA----PAFLRQESFTKEPASGPP 878
            P+ P     +V+ +      L      P  +P+   P     P ++     +  PA  PP
Sbjct: 2857 PAEPTLPSTHVTPSEPKPFVLDTGTPIPASTPQGVKPVSSSTPVYVVTSFVSAPPAPEPP 2916

Query: 879  APGKPP 884
            AP  PP
Sbjct: 2917 APEPPP 2922



 Score = 35.4 bits (80), Expect = 0.43
 Identities = 111/547 (20%), Positives = 180/547 (32%), Gaps = 71/547 (12%)

Query: 357 GTQSDSEDPLAKAASAAGVPLEA-SGEQVRLQRQIKRDPQELLHNQQAFVIEFFDEDTPR 415
           G    SED L+ A+   G       G  + +   +   PQ  L  ++  +      + PR
Sbjct: 240 GASWGSEDSLSVASDLYGSAFSLYRGRALSIHVSV---PQSGLRREEPDLQPQLASEAPR 296

Query: 416 KKRSQSFTHS---PSGDPKADKRRGPTPADRDRPSVPAPVQAGGRSSGPQRAGSLKREKT 472
           +      + S   P   P+  KR  P P  +   +  +P +       P+   + ++   
Sbjct: 297 RPAQPPPSKSALLPPPSPRVGKRSPPGPPAQPAATPTSPHRRTQEPVLPEDTTTEEKRGK 356

Query: 473 EERLGSPSPASRTPARP----FGSVGRRSRLAQDFMAQCLRESSPAARPSPEKVPPVLPA 528
           + +   PS A    +RP      + GR S L +          SP    +  ++   L  
Sbjct: 357 KSKSSGPSLAGTAESRPQTPLSEASGRLSALGR----------SPRLVRAGSRILDKL-- 404

Query: 529 PLTPHGTSPVGPPTPPPAPTDP--QLTKARKQEEDDSLSDAGTYTIETEAQDT----EVE 582
                    +     PPAP  P   L KAR  E+  S   A   T     ++      V 
Sbjct: 405 QFFEERRRSLERSDSPPAPLRPWVPLRKARSLEQPKSERGAPWGTPGASQEELRAPGSVA 464

Query: 583 EARKMIDQVFGVLESPELSRASSATFRPVIRGDRDESDDGGVAQRMALLQEFASRPLGAA 642
           E R++  Q    L+     R+ ++        +          + +    E     L  A
Sbjct: 465 ERRRLFQQKAASLDERTRQRSPASDLELRFAQELGRIRRSTSREELVRSHESLRATLQRA 524

Query: 643 PQAEHQGLPV----PGSPGGQKWVSRWASLADSYSDPGLTEDGLGR------RGGEPEGS 692
           P     G P     P +P   + VS  A+   S S      D  GR       G    G 
Sbjct: 525 PSPREPGEPPLFSRPSTPKTSRAVSPAAAQPPSPSSAEKPGDEPGRPRSRGPAGRTEPGE 584

Query: 693 LPVRMRRRLPQLPSERADS---------PAGPESSRRSGPGPPELDSEQPSRLFGQEELD 743
            P +  RR  Q P  R+ +         P   +        PP    E P++        
Sbjct: 585 GPQQEVRRRDQFPLTRSRAIQECRSPVPPPAADPPEARTKAPPGRKREPPAQAVRFLPWA 644

Query: 744 PDSLSDASGSDGGRGPEPGVEPQDSRRRSPQEGPTWS----RGRRS--------PRAPGE 791
              L  A+          G E +   RR P+E   W     RG RS        P +P  
Sbjct: 645 TPGLEGAAVPQTLEKNRAGPEAEKRLRRGPEEDGPWGPWDRRGARSQGKGRRARPTSPEL 704

Query: 792 PTPASFFI--GDQNGDAVLSRKPL----AAPGDGEGLGQTAQPSPPA-----RDGVYVSA 840
            +    ++  G++  +A +   PL     APG    L      +PP      +DG  + +
Sbjct: 705 ESSDDSYVSAGEEPLEAPVFEIPLQNVVVAPGADVLLKCIITANPPPQVSWHKDGSALRS 764

Query: 841 NGRMVIQ 847
            GR++++
Sbjct: 765 EGRLLLR 771



 Score = 35.4 bits (80), Expect = 0.43
 Identities = 32/132 (24%), Positives = 49/132 (37%), Gaps = 7/132 (5%)

Query: 428  GDPKADKRRGPTPADRDRPSVPAPVQAGGRSSGPQRAGSLKREKTEERLGSPSPASRTPA 487
            G    D R     +    P    P++    + G Q++ S  + + E R G    A     
Sbjct: 2096 GGRARDPRMARAASSEAAPHHQPPLE----NRGLQKSSSFSQGEAEPR-GRHRRAGAPLE 2150

Query: 488  RPFGSVGRRSRLAQDFMAQCLRESSPAARPSPEKVPPVLPAPLTPHGTSPVGPPTPP-PA 546
             P   +G R RL +      L E+ P++   P    P  P    P  T+P   P PP P 
Sbjct: 2151 IPVARLGAR-RLQESPSLSALSEAQPSSPARPSAPKPSTPKSAEPSATTPSDAPQPPAPQ 2209

Query: 547  PTDPQLTKARKQ 558
            P   +  + R +
Sbjct: 2210 PAQDKAPEPRPE 2221



 Score = 33.1 bits (74), Expect = 2.1
 Identities = 73/340 (21%), Positives = 109/340 (32%), Gaps = 70/340 (20%)

Query: 236  PSQPPEVPAHEMPTKDAEAGGGGAAP---VVQSHASFTIEFDDCSPGKMKIKDH-ITKFS 291
            PSQ  E P+ E      +    GA+P    ++  +S         P ++    H      
Sbjct: 1980 PSQDQEAPSPEALPSPGQEPAAGASPRRGELRRGSSAESALPRAGPRELGRGLHKAASVE 2039

Query: 292  LRQRRPPGKEATPGEMVSAETKVADWLVQNDPSLLHRVGPGDDRHSTKSDLPVHTRTLKG 351
            L QRR P   AT                      L R G G+  ++ +    +  R L+G
Sbjct: 2040 LPQRRSPSPGATR---------------------LARGGLGEGEYAQRLQA-LRQRLLRG 2077

Query: 352  HKHEDGTQSDSEDPLAKAASAAGVPLEASGEQVRLQRQIKRDPQELLHNQQAFVIEFFDE 411
               EDG  S    PL          LE+ G + R  R  +    E   + Q  +      
Sbjct: 2078 GP-EDGKVSGLRGPL----------LESLGGRARDPRMARAASSEAAPHHQPPL------ 2120

Query: 412  DTPRKKRSQSFTHSPSGDPKADKRRGPTPADRDRPSVPAPVQAGGRSSGPQRAGSLKREK 471
            +    ++S SF+   + +P+   RR   P +     +P       R        +L   +
Sbjct: 2121 ENRGLQKSSSFSQGEA-EPRGRHRRAGAPLE-----IPVARLGARRLQESPSLSALSEAQ 2174

Query: 472  TEERLGSPSPASRTPARPFGSVGRRSRLAQDFMAQCLRESSPAARPSP----EKVPP--- 524
                    +P   TP     S    S   Q    Q  ++ +P  RP P    +  PP   
Sbjct: 2175 PSSPARPSAPKPSTPKSAEPSATTPSDAPQPPAPQPAQDKAPEPRPEPVRASKPAPPPQA 2234

Query: 525  --VLPAPLTP------------HGTSPVGPPTPPPAPTDP 550
               L  PLTP            H   P   P  PP+   P
Sbjct: 2235 LQTLALPLTPYAQIIQSLQLSGHAQGPSQGPAAPPSEPKP 2274


>gi|116268127 kinase non-catalytic C-lobe domain (KIND) containing 1
            isoform a [Homo sapiens]
          Length = 1749

 Score = 54.7 bits (130), Expect = 7e-07
 Identities = 71/277 (25%), Positives = 103/277 (37%), Gaps = 45/277 (16%)

Query: 841  NGRMVIQLRPGRSPEPDGPAPAFLRQESFTKEPASGPPAPGKPPHISSHPLLQDLAATRA 900
            N   V++L+P  +P P+ P+P FL   S T   A   P PG+      HP  ++     A
Sbjct: 616  NAFSVVELKPSVAPAPE-PSPGFLPVNSDTGLVAVPGPVPGQ------HPCGEEATQLPA 668

Query: 901  ARMDFHSQDTHL--ILKETETALAALEARLLSNSVDAECEGGSTPRPPEDALSGDSDVDT 958
            A   F S+ TH   I+     ++A  +  L     ++E  GG      E+ LS ++   +
Sbjct: 669  A---FTSEATHFKPIVLAQNASVARDQPALAQE--ESEERGGQREGEGEEKLSLEAHAGS 723

Query: 959  ASTVSLRSGKSGPSP--TTPQPLRAQKEMS---------PSPPAAQDPGGTALVSAREQS 1007
             S  +      GP P    P+PL A  +           P  PA Q  G ++        
Sbjct: 724  PSLKTPDGPVPGPGPQGAAPEPLGASVQRDSAQGRPCPPPQAPANQPEGASSAAPGSPVP 783

Query: 1008 SERQHHPLGPTDMGRGEPVRRSAIRRGHRPRGSLDWPSEERGPVLAH--------LPSSD 1059
            +        P + G  EP+       G RP        +  GP  AH         P S 
Sbjct: 784  APPTKASALPVEQGPAEPIPPGVASGGLRP--------DALGPTTAHHGPRHPPKPPRSK 835

Query: 1060 VMASNHETPEATGAGRLGSR--RKPAAPP--PSPAAR 1092
                  + PE  GA   G R  + P + P  P PA R
Sbjct: 836  ATERPGQEPEGPGATPAGERDDQSPDSVPERPRPADR 872



 Score = 40.8 bits (94), Expect = 0.010
 Identities = 33/99 (33%), Positives = 41/99 (41%), Gaps = 6/99 (6%)

Query: 449 PAPVQAGGRSSGPQRAGSLKREKTEERLGSPSPASRTPARPFGSVGRRSRLAQDFMAQCL 508
           PA  Q      G QR G    EK      + SP+ +TP  P    G +    +   A   
Sbjct: 693 PALAQEESEERGGQREGE-GEEKLSLEAHAGSPSLKTPDGPVPGPGPQGAAPEPLGASVQ 751

Query: 509 RESSPAARPSPEKVPPVLPAPLTPHGTSPVGPPTPPPAP 547
           R+S+   RP P   PP  PA   P G S   P +P PAP
Sbjct: 752 RDSAQG-RPCP---PPQAPAN-QPEGASSAAPGSPVPAP 785



 Score = 38.1 bits (87), Expect = 0.067
 Identities = 97/397 (24%), Positives = 141/397 (35%), Gaps = 89/397 (22%)

Query: 678  TEDGLGRRGGEPEGSLPVRMRRRLPQLPSERADSPAGPESSRRSGPGP----PELDSEQP 733
            +E+  G+R GE E  L +      P L +     P GP      GPGP    PE      
Sbjct: 700  SEERGGQREGEGEEKLSLEAHAGSPSLKT-----PDGPVP----GPGPQGAAPEPLGASV 750

Query: 734  SRLFGQEELDPDSLSDASGSDGGRGPEPGVEPQDSRRRSPQEGP-TWSRGRRSPRAPGEP 792
             R   Q    P   + A+  +G     PG         SP   P T +      + P EP
Sbjct: 751  QRDSAQGRPCPPPQAPANQPEGASSAAPG---------SPVPAPPTKASALPVEQGPAEP 801

Query: 793  TPASFFIGDQNGDAVLSRKPLAAPGDGEGLGQTAQPSPPARDGVYVSANGRMVIQLRPGR 852
             P     G    DA+    P  A       G    P PP           R     RPG+
Sbjct: 802  IPPGVASGGLRPDAL---GPTTAHH-----GPRHPPKPP-----------RSKATERPGQ 842

Query: 853  SPEPDGPAPAFLRQESFTKEPASGPPAPGKP-------PHISSHPL--------LQDLAA 897
             PE  G  PA  R +   + P S P  P +P       P + + PL        LQ+  A
Sbjct: 843  EPEGPGATPAGERDD---QSPDSVPERP-RPADRRLCLPCVDASPLPGRTACPSLQE--A 896

Query: 898  TRAARMDFHSQD------THLILKETETALAALEARLLSNSVDAE-CEGGSTPRPPEDAL 950
            TR  + +F            LI+ E   AL  L       ++  + C+           L
Sbjct: 897  TRLIQEEFAFDGYLDNGLEALIMGEYIFALKDLTFATFCGAISEKFCD-----------L 945

Query: 951  SGDSDVDTASTVSLRSGKSGPSPTTPQPLRAQKEMSPSP--PAAQDPG----GTALVSAR 1004
              D  +   +   + +G++ PSP+T +   +Q E S SP  P+++ P     G    +  
Sbjct: 946  YWDEKL-LQNLFKVVNGQASPSPSTAEEAGSQLEGSQSPRSPSSKRPSLHRLGKEKPAMA 1004

Query: 1005 EQSSERQHHPLGPTDMGRGEPVRRSAIRRGHRPRGSL 1041
              SS     P   +D+   + + R     G RP+ S+
Sbjct: 1005 RTSSRAPCSPTSVSDVD-SDALSRGNFEVGFRPQRSV 1040



 Score = 35.8 bits (81), Expect = 0.33
 Identities = 55/242 (22%), Positives = 77/242 (31%), Gaps = 30/242 (12%)

Query: 1069 EATGAGRLGSRRKPAAPPPSPAAREEQSRSSASSQKGPQALTRSNSLSTPRPTRASRLRR 1128
            E    G  G RR P  P   P          + + +GP+A      LSTP     S  R 
Sbjct: 217  ERPAPGNAGPRRPPGDPSTDPEVLPTPEGPESETSRGPRASPTKALLSTPVRNGESHSRE 276

Query: 1129 ARLGDASDTEAADGERGSLGNPEPVGRPAAEQAKKLSRL------DILAMPRKRAGSFTG 1182
               G   D E   GE     + + + R    + +   RL        L +P  R  S   
Sbjct: 277  GLAGLVLDAERTLGEL----DRDALRRSRLRKVQTFPRLLSDSPEATLCLPLTRGKSQLP 332

Query: 1183 TSDPEAAPARTSFSGRSVELCCASRKPTM-------AEARAVSRKAANTATTTGPRQPFS 1235
             S+  +   R +F  R   L     +P          E +      A  +T  GP  P S
Sbjct: 333  ISELFSPDPRKAFLDRKNGLSSFQAQPKCRLWPEQEPEHQLGRVPCAGRSTDRGPGVPGS 392

Query: 1236 RARSGSARYTSTTQTPRAGSSSRARSRAPG-PRDTDDDEEEPDPYGFIVQTAEIAEIARL 1294
              +            P     S+  + AP  PRD   + + P     I + A   E A  
Sbjct: 393  PGQ------------PETSHPSQGPAEAPADPRDASGEAQTPRDDERIPEGARQLESAAA 440

Query: 1295 SQ 1296
             Q
Sbjct: 441  EQ 442


>gi|239754955 PREDICTED: similar to COL22A1 protein [Homo sapiens]
          Length = 1073

 Score = 54.3 bits (129), Expect = 9e-07
 Identities = 144/608 (23%), Positives = 197/608 (32%), Gaps = 85/608 (13%)

Query: 593  GVLESPELSRASSATFRPVIRGDRDESDDGGVAQRMALLQEFASRPLGAAPQAEHQGLPV 652
            G + +P  S    +   P +RG   +  DG   ++ A  +E +  P+G        GLP 
Sbjct: 404  GHVGAPGPSGPPGSVGAPGLRGTPGK--DGERGEKGAAGEEGSPGPVGPRGDPGAPGLPG 461

Query: 653  P------------GSPG--------GQKWVSRWASLADSYSDPGLTEDGLGRRGGEPEGS 692
            P            GSPG        G +          S  DPG+   G     G P G 
Sbjct: 462  PPGKGKDGEPGLRGSPGLPGPLGTKGDRGAPGIPGSPGSRGDPGIGVAGPPGPSGPP-GD 520

Query: 693  LPVRMRRRLPQLPSERADSPAGPES-SRRSGPGPPELDSEQPSRLFGQEELDPDSLSDAS 751
                  R LP  P  +   PAG +  S    PG   L             L  D  +D  
Sbjct: 521  KGSPGSRGLPGFPGPQG--PAGRDGLSSLLSPGDINL-------------LAKDVCNDCP 565

Query: 752  GSDGGRGPEPGVEPQDSRRRSP-QEGPTWSRGRRSPRAPGEPTPASFF-----IGDQNGD 805
                G    PG +        P +EG    +G   P  PG P P          G++  D
Sbjct: 566  PGPPGLPGLPGFKGDKGVPGKPGREGTEGKKGEAGP--PGLPGPPGIAGPQGSQGERGAD 623

Query: 806  AVLSRK-PLAAPGDGEGLGQTAQPSPPARDGVYVSANGRMVIQLRPGRS--PEPDGPA-- 860
              + +K     PG    +G    P PP  DG+   A G   IQ  PG+   P P GP+  
Sbjct: 624  GEVGQKGDQGHPGVPGFMGPPGNPGPPGADGI-AGAAGPPGIQGSPGKEGPPGPQGPSGL 682

Query: 861  PAFLRQESFTKEPASGPPAPGKPPHISSHPLLQDLAATRA-ARMDFHSQDTHLILKETET 919
            P    +E   KE   G P P   P  +  P L      R       H+ D+       E+
Sbjct: 683  PGIPGEEG--KEGRDGKPGPPGEPGKAGEPGLPGPEGARGPPGFKGHTGDSGAPGPRGES 740

Query: 920  ALAALEAR--LLSNSVDAECEGGSTPRPPEDALSGDSDVDTASTVSLRSGKSGPSPTTPQ 977
                L  +  L     D    G   P+ P      +    +        G+ GPS T  Q
Sbjct: 741  GAMGLPGQEGLPGKDGDTGPTGPQGPQGPRGPPGKNGSPGS-------PGEPGPSGTPGQ 793

Query: 978  PLRAQKEMSPSPPAAQDPGGTALVSAREQSSERQHHPLGPTDMG----RGEPVRRSAIRR 1033
                 +  SP  P    P G       +    ++  P  P + G    RG+P     I+ 
Sbjct: 794  KGSKGENGSPGLPGFLGPRGPPGEPGEKGVPGKEGVPGKPGEPGFKGERGDP----GIKG 849

Query: 1034 GHRPRGSLDWPSEERGPVLAHLPSSDVMASNHETPEATGAGRLGSRRKPAAP---PPSPA 1090
               P G    P +   P   H   + +M       E    G  G   +P  P     SP+
Sbjct: 850  DKGPPGGKGQPGDPGIP--GHKGHTGLMGPQGLPGENGPVGPPGPPGQPGFPGLRGESPS 907

Query: 1091 AREEQSRSSASSQKGPQALTRSNSLSTPRPTRASRLRRARLGDAS--DTEAADGERGSLG 1148
               E  R     + G Q  TR   L    P    +  + R G       +   G  G +G
Sbjct: 908  M--ETLRRLIQEELGKQLETRLAYLLAQMPPAYMKSSQGRPGPPGPPGKDGLPGRAGPMG 965

Query: 1149 NPEPVGRP 1156
             P   GRP
Sbjct: 966  EP---GRP 970



 Score = 45.8 bits (107), Expect = 3e-04
 Identities = 134/582 (23%), Positives = 170/582 (29%), Gaps = 125/582 (21%)

Query: 610  PVIRGDRDESDDGGVAQRMALLQEFASRPLGAAPQAEHQGLPVPGSPGGQKWVSRWASLA 669
            P ++GDR E  + G A    L       P   +    H  +P    P G+K         
Sbjct: 312  PGLKGDRGEKGEAGPAGPPGL-------PGTTSLFTPHPRMPGEQGPKGEK--------- 355

Query: 670  DSYSDPGLT-EDGLGRRGGE-----PEGSLPVRMRRRLPQLPSERADSPAGPESSRRSGP 723
                DPGL  E GL  R GE     P G    + +      P   A +P  P      GP
Sbjct: 356  ---GDPGLPGEPGLQGRPGELGPQGPTGPPGAKGQEGAHGAPGA-AGNPGAPGHVGAPGP 411

Query: 724  -GPPELDSEQPSRLFGQEELDPDSLSDASGSDGGRGPEPGVEPQDSRRRSPQEGPTWSRG 782
             GPP               +    L    G DG RG E G   ++    SP  GP   RG
Sbjct: 412  SGPPG-------------SVGAPGLRGTPGKDGERG-EKGAAGEEG---SP--GPVGPRG 452

Query: 783  RRSPRAPGEPTPASFFIGDQNGDAVLSRKPLAAPGDGEGLGQTAQPSPPARDGVYVSANG 842
               P APG P P       ++G+  L   P   PG     G    P  P           
Sbjct: 453  --DPGAPGLPGPPG---KGKDGEPGLRGSP-GLPGPLGTKGDRGAPGIPGS--------- 497

Query: 843  RMVIQLRPGRSPEPDGPAPAFLRQESFTKEPASGPPAPGKPPHISSHPLLQDLAATRAAR 902
                   PG   +P                  +GPP P  PP     P  + L       
Sbjct: 498  -------PGSRGDPG--------------IGVAGPPGPSGPPGDKGSPGSRGLPG----- 531

Query: 903  MDFHSQDTHLILKETETALAALEARLLSNSVDAECEGGSTPRPPEDALSGDSDVDTASTV 962
              F             + L+  +  LL+  V  +C  G    P      GD  V      
Sbjct: 532  --FPGPQGPAGRDGLSSLLSPGDINLLAKDVCNDCPPGPPGLPGLPGFKGDKGVP----- 584

Query: 963  SLRSGKSGPSPTTPQPLRAQKEMSPSPPAAQDPGGTALVSAREQSSER---QHHPLGPTD 1019
                GK G   T  +   A     P PP    P G+      +    +   Q HP  P  
Sbjct: 585  ----GKPGREGTEGKKGEAGPPGLPGPPGIAGPQGSQGERGADGEVGQKGDQGHPGVPGF 640

Query: 1020 MG---RGEPVRRSAIRRGHRPRGSLDWPSEERGPVLAHLPSSDVMASNHETPEATGA--- 1073
            MG      P     I     P G    P +E GP     PS        E  E       
Sbjct: 641  MGPPGNPGPPGADGIAGAAGPPGIQGSPGKE-GPPGPQGPSGLPGIPGEEGKEGRDGKPG 699

Query: 1074 --GRLGSRRKPAAPPPSPAAREEQSRSSASSQKGPQALTRSNSLSTPRPTRASRLRRARL 1131
              G  G   +P  P P  A      +        P     S ++  P           + 
Sbjct: 700  PPGEPGKAGEPGLPGPEGARGPPGFKGHTGDSGAPGPRGESGAMGLPGQEGLP----GKD 755

Query: 1132 GDASDT-----------EAADGERGSLGNPEPVGRPAAEQAK 1162
            GD   T              +G  GS G P P G P  + +K
Sbjct: 756  GDTGPTGPQGPQGPRGPPGKNGSPGSPGEPGPSGTPGQKGSK 797


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.310    0.129    0.375 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,906,492
Number of Sequences: 37866
Number of extensions: 4901611
Number of successful extensions: 38623
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 142
Number of HSP's successfully gapped in prelim test: 1531
Number of HSP's that attempted gapping in prelim test: 25290
Number of HSP's gapped (non-prelim): 12648
length of query: 1554
length of database: 18,247,518
effective HSP length: 116
effective length of query: 1438
effective length of database: 13,855,062
effective search space: 19923579156
effective search space used: 19923579156
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 69 (31.2 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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