SNIP1 12831

Name: SNIP1	Sequence: fasta or formatted (396aa)		NCBI GI: 21314720
Description: Smad nuclear interacting protein		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.3 17 1 C cysteine 0.3 1 1 D aspartate 5.8 23 2 E glutamate 10.4 41 6 F phenylalanine 2.0 8 1 G glycine 7.6 30 4 H histidine 4.5 18 2 I isoleucine 2.5 10 2 K lysine 6.6 26 3 L leucine 4.5 18 2 M methionine 0.5 2 1 N asparagine 3.8 15 2 P proline 7.3 29 2 Q glutamine 4.0 16 1 R arginine 14.9 59 3 S serine 9.3 37 2 T threonine 2.5 10 1 V valine 6.1 24 3 W tryptophan 0.3 1 1 Y tyrosine 2.8 11 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 Smad nuclear interacting protein SFRS12 0.055 splicing factor, arginine/serine-rich 12 isoform a ... SFRS12 0.055 splicing factor, arginine/serine-rich 12 isoform b [... PPP1R8 0.053 protein phosphatase 1 regulatory inhibitor subunit 8... SLC4A1AP 0.051 solute carrier family 4 (anion exchanger), member 1... LOC100170229 0.045 hypothetical protein LOC100170229 DDX46 0.045 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 RSRC2 0.045 arginine/serine-rich coiled-coil 2 isoform a SFRS4 0.042 splicing factor, arginine/serine-rich 4 LOC100286959 0.042 PREDICTED: hypothetical protein XP_002343921 PRPF38B 0.041 PRP38 pre-mRNA processing factor 38 (yeast) domain ... KIAA0284 0.041 hypothetical protein LOC283638 isoform 1 ZC3H13 0.037 zinc finger CCCH-type containing 13 SFRS11 0.037 splicing factor, arginine/serine-rich 11 C2orf16 0.037 hypothetical protein LOC84226 SRRM2 0.037 splicing coactivator subunit SRm300 SFRS18 0.036 splicing factor, arginine/serine-rich 130 SFRS18 0.036 splicing factor, arginine/serine-rich 130 LOC100133599 0.036 PREDICTED: hypothetical protein KIAA1853 0.036 KIAA1853 protein RBM25 0.034 RNA binding motif protein 25 FLG 0.034 filaggrin LOC100133599 0.034 PREDICTED: hypothetical protein FLJ37078 0.034 hypothetical protein LOC222183 LOC100131202 0.033 PREDICTED: hypothetical protein PPIG 0.032 peptidylprolyl isomerase G CIR1 0.032 CBF1 interacting corepressor RNASEN 0.031 ribonuclease III, nuclear isoform 1 MLLT1 0.031 myeloid/lymphoid or mixed-lineage leukemia (trithora... PHRF1 0.031 PHD and ring finger domains 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.