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Search of human proteins with 160333411
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|160333411 early B-cell factor 4 [Homo sapiens]
(598 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|160333411 early B-cell factor 4 [Homo sapiens] 1216 0.0
gi|31415878 early B-cell factor [Homo sapiens] 884 0.0
gi|53828926 early B-cell factor 3 [Homo sapiens] 847 0.0
gi|113930703 early B-cell factor 2 [Homo sapiens] 828 0.0
gi|110832843 TBP-associated factor 4 [Homo sapiens] 52 1e-06
gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo sap... 48 3e-05
gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens] 48 3e-05
gi|18079216 CASK interacting protein 1 [Homo sapiens] 47 7e-05
gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor ... 45 2e-04
gi|149158696 HLA-B associated transcript-3 isoform b [Homo sapiens] 43 7e-04
gi|18375632 HLA-B associated transcript-3 isoform b [Homo sapiens] 43 7e-04
gi|18375630 HLA-B associated transcript-3 isoform b [Homo sapiens] 43 7e-04
gi|149158692 HLA-B associated transcript-3 isoform a [Homo sapiens] 43 7e-04
gi|110556644 zinc finger protein, multitype 1 [Homo sapiens] 43 7e-04
gi|134142824 forkhead box D2 [Homo sapiens] 43 7e-04
gi|24497504 forkhead box A2 isoform 2 [Homo sapiens] 43 0.001
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 43 0.001
gi|12707580 paired-like homeobox 2b [Homo sapiens] 43 0.001
gi|194394143 forkhead box A2 isoform 1 [Homo sapiens] 43 0.001
gi|45439359 triple functional domain (PTPRF interacting) [Homo s... 43 0.001
gi|163965366 nascent polypeptide-associated complex alpha subuni... 43 0.001
gi|55750053 atrophin-1 [Homo sapiens] 42 0.001
gi|55750041 atrophin-1 [Homo sapiens] 42 0.001
gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens] 42 0.001
gi|54607108 zinc finger, MIZ-type containing 2 isoform 1 [Homo s... 42 0.001
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 42 0.002
gi|194363725 SWI/SNF-related matrix-associated actin-dependent r... 42 0.002
gi|4758392 forkhead box D1 [Homo sapiens] 41 0.003
gi|13994236 cat eye syndrome chromosome region, candidate 6 isof... 41 0.004
gi|22748877 basic helix-loop-helix domain containing, class B, 5... 41 0.004
>gi|160333411 early B-cell factor 4 [Homo sapiens]
Length = 598
Score = 1216 bits (3146), Expect = 0.0
Identities = 598/598 (100%), Positives = 598/598 (100%)
Query: 1 MDALPRSGLNLKEEPLLPAGLGSVRSWMQGAGILDASTAAQSGVGLARAHFEKQPPSNLR 60
MDALPRSGLNLKEEPLLPAGLGSVRSWMQGAGILDASTAAQSGVGLARAHFEKQPPSNLR
Sbjct: 1 MDALPRSGLNLKEEPLLPAGLGSVRSWMQGAGILDASTAAQSGVGLARAHFEKQPPSNLR 60
Query: 61 KSNFFHFVLAMYDRQGQPVEVERTAFIDFVEKDREPGAEKTNNGIHYRLRLVYNNGLRTE 120
KSNFFHFVLAMYDRQGQPVEVERTAFIDFVEKDREPGAEKTNNGIHYRLRLVYNNGLRTE
Sbjct: 61 KSNFFHFVLAMYDRQGQPVEVERTAFIDFVEKDREPGAEKTNNGIHYRLRLVYNNGLRTE 120
Query: 121 QDLYVRLIDSMSKQAIIYEGQDKNPEMCRVLLTHEIMCSRCCDRKSCGNRNETPSDPVII 180
QDLYVRLIDSMSKQAIIYEGQDKNPEMCRVLLTHEIMCSRCCDRKSCGNRNETPSDPVII
Sbjct: 121 QDLYVRLIDSMSKQAIIYEGQDKNPEMCRVLLTHEIMCSRCCDRKSCGNRNETPSDPVII 180
Query: 181 DRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVSVDGHVLAVSDNMFVHNNSKHGRR 240
DRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVSVDGHVLAVSDNMFVHNNSKHGRR
Sbjct: 181 DRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVSVDGHVLAVSDNMFVHNNSKHGRR 240
Query: 241 ARRLDPSEAATPCIKAISPGEGWTTGGATVIVIGDNFFDGLQVVFGNVLVWSELITPHAI 300
ARRLDPSEAATPCIKAISPGEGWTTGGATVIVIGDNFFDGLQVVFGNVLVWSELITPHAI
Sbjct: 241 ARRLDPSEAATPCIKAISPGEGWTTGGATVIVIGDNFFDGLQVVFGNVLVWSELITPHAI 300
Query: 301 RVQTPPRHIPGVVEVTLSYKSKQFCKGCPGRFVYTALNEPTIDYGFQRLQKVIPRHPGDP 360
RVQTPPRHIPGVVEVTLSYKSKQFCKGCPGRFVYTALNEPTIDYGFQRLQKVIPRHPGDP
Sbjct: 301 RVQTPPRHIPGVVEVTLSYKSKQFCKGCPGRFVYTALNEPTIDYGFQRLQKVIPRHPGDP 360
Query: 361 ERLPKEVLLKRAADLAEALYGVPGSNQELLLKRAADVAEALYSTPRAPGPLAPLAPSHPH 420
ERLPKEVLLKRAADLAEALYGVPGSNQELLLKRAADVAEALYSTPRAPGPLAPLAPSHPH
Sbjct: 361 ERLPKEVLLKRAADLAEALYGVPGSNQELLLKRAADVAEALYSTPRAPGPLAPLAPSHPH 420
Query: 421 PAVVGINAFSSPLAIAVGDATPGPEPGYARSCSSASPRGFAPSPGSQQSGYGGGLGAGLG 480
PAVVGINAFSSPLAIAVGDATPGPEPGYARSCSSASPRGFAPSPGSQQSGYGGGLGAGLG
Sbjct: 421 PAVVGINAFSSPLAIAVGDATPGPEPGYARSCSSASPRGFAPSPGSQQSGYGGGLGAGLG 480
Query: 481 GYGAPGVAGLGVPGSPSFLNGSTATSPFAIMPSSPPLAAASSMSLPAAAPTTSVFSFSPV 540
GYGAPGVAGLGVPGSPSFLNGSTATSPFAIMPSSPPLAAASSMSLPAAAPTTSVFSFSPV
Sbjct: 481 GYGAPGVAGLGVPGSPSFLNGSTATSPFAIMPSSPPLAAASSMSLPAAAPTTSVFSFSPV 540
Query: 541 NMISAVKQRSAFAPVLRPPSSPPQACPRAHGEGLPDQSFEDSDKFHSPARGLQGLAYS 598
NMISAVKQRSAFAPVLRPPSSPPQACPRAHGEGLPDQSFEDSDKFHSPARGLQGLAYS
Sbjct: 541 NMISAVKQRSAFAPVLRPPSSPPQACPRAHGEGLPDQSFEDSDKFHSPARGLQGLAYS 598
>gi|31415878 early B-cell factor [Homo sapiens]
Length = 591
Score = 884 bits (2285), Expect = 0.0
Identities = 433/581 (74%), Positives = 498/581 (85%), Gaps = 14/581 (2%)
Query: 2 DALPRSGLNLKEEPLLPAGLGSVRSWMQGAGILDASTAAQSGVGLARAHFEKQPPSNLRK 61
+++ RSG ++KEEPL +G+ +VR+WMQGAG+LDA+TAAQSGVGLARAHFEKQPPSNLRK
Sbjct: 6 ESIQRSGSSMKEEPL-GSGMNAVRTWMQGAGVLDANTAAQSGVGLARAHFEKQPPSNLRK 64
Query: 62 SNFFHFVLAMYDRQGQPVEVERTAFIDFVEKDREPGAEKTNNGIHYRLRLVYNNGLRTEQ 121
SNFFHFVLA+YDRQGQPVE+ERTAF+ FVEK++E +EKTNNGIHYRL+L+Y+NG+RTEQ
Sbjct: 65 SNFFHFVLALYDRQGQPVEIERTAFVGFVEKEKEANSEKTNNGIHYRLQLLYSNGIRTEQ 124
Query: 122 DLYVRLIDSMSKQAIIYEGQDKNPEMCRVLLTHEIMCSRCCDRKSCGNRNETPSDPVIID 181
D YVRLIDSM+KQAI+YEGQDKNPEMCRVLLTHEIMCSRCCD+KSCGNRNETPSDPVIID
Sbjct: 125 DFYVRLIDSMTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDPVIID 184
Query: 182 RFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVSVDGHVLAVSDNMFVHNNSKHGRRA 241
RFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTV+VDGHVLAVSDNMFVHNNSKHGRRA
Sbjct: 185 RFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKHGRRA 244
Query: 242 RRLDPSEA-------ATPCIKAISPGEGWTTGGATVIVIGDNFFDGLQVVFGNVLVWSEL 294
RRLDPSE ATPCIKAISP EGWTTGGATVI+IGDNFFDGLQV+FG +LVWSEL
Sbjct: 245 RRLDPSEGTPSYLEHATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVIFGTMLVWSEL 304
Query: 295 ITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGCPGRFVYTALNEPTIDYGFQRLQKVIP 354
ITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKG PGRF+YTALNEPTIDYGFQRLQKVIP
Sbjct: 305 ITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGTPGRFIYTALNEPTIDYGFQRLQKVIP 364
Query: 355 RHPGDPERLPKEVLLKRAADLAEALYGVPGSNQELLLKRAADVAEALYSTPRAPGPLAPL 414
RHPGDPERLPKEV+LKRAADL EALYG+P +NQE++LKRAAD+AEALYS PR L L
Sbjct: 365 RHPGDPERLPKEVILKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHNQLPAL 424
Query: 415 APSHPHPAVVGINAFSSPLAIAVGDATPGPEPGYARSCSSASPRGFAPSPGSQQSGYGGG 474
A + H ++G+N+FS LA+ V +A+ G+ R+ SS SP G+ PS QQ+ Y
Sbjct: 425 ANTSVHAGMMGVNSFSGQLAVNVSEASQATNQGFTRNSSSVSPHGYVPSTTPQQTNY-NS 483
Query: 475 LGAGLGGYGAPGVAGLGVPGSPSFLNGSTATSPFAIMPSSPPLAAASSMSLPAAAPTTS- 533
+ + GYG+ ++ LG GSP+FLNGS A SP+AI+PSSP + ASS SLP+ ++S
Sbjct: 484 VTTSMNGYGSAAMSNLG--GSPTFLNGSAANSPYAIVPSSPTM--ASSTSLPSNCSSSSG 539
Query: 534 VFSFSPVNMISAVKQRSAFAPVLRPPSSPPQACPRAHGEGL 574
+FSFSP NM+SAVKQ+SAFAPV+RP +SPP C +G L
Sbjct: 540 IFSFSPANMVSAVKQKSAFAPVVRPQTSPPPTCTSTNGNSL 580
>gi|53828926 early B-cell factor 3 [Homo sapiens]
Length = 551
Score = 847 bits (2189), Expect = 0.0
Identities = 420/576 (72%), Positives = 473/576 (82%), Gaps = 40/576 (6%)
Query: 4 LPRSGLNLKEEPLLPAGLGSVRSWMQGAGILDASTAAQSGVGLARAHFEKQPPSNLRKSN 63
+PR G +KEEPL +G+ VRSWM AG++DA+TAAQSGVGLARAHFEKQPPSNLRKSN
Sbjct: 8 IPRGGTTMKEEPL-GSGMNPVRSWMHTAGVVDANTAAQSGVGLARAHFEKQPPSNLRKSN 66
Query: 64 FFHFVLAMYDRQGQPVEVERTAFIDFVEKDREPGAEKTNNGIHYRLRLVYNNGLRTEQDL 123
FFHFVLA+YDRQGQPVE+ERTAF+DFVEK++EP EKTNNGIHY+L+L+Y+NG+RTEQDL
Sbjct: 67 FFHFVLALYDRQGQPVEIERTAFVDFVEKEKEPNNEKTNNGIHYKLQLLYSNGVRTEQDL 126
Query: 124 YVRLIDSMSKQAIIYEGQDKNPEMCRVLLTHEIMCSRCCDRKSCGNRNETPSDPVIIDRF 183
YVRLIDSM+KQAI+YEGQDKNPEMCRVLLTHEIMCSRCCD+KSCGNRNETPSDPVIIDRF
Sbjct: 127 YVRLIDSMTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDPVIIDRF 186
Query: 184 FLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVSVDGHVLAVSDNMFVHNNSKHGRRARR 243
FLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTV+VDGHVLAVSDNMFVHNNSKHGRRARR
Sbjct: 187 FLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKHGRRARR 246
Query: 244 LDPSEAATPCIKAISPGEGWTTGGATVIVIGDNFFDGLQVVFGNVLVWSELITPHAIRVQ 303
LDPSE ATPCIKAISP EGWTTGGATVI+IGDNFFDGLQVVFG +LVWSELITPHAIRVQ
Sbjct: 247 LDPSE-ATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVVFGTMLVWSELITPHAIRVQ 305
Query: 304 TPPRHIPGVVEVTLSYKSKQFCKGCPGRFVYTALNEPTIDYGFQRLQKVIPRHPGDPERL 363
TPPRHIPGVVEVTLSYKSKQFCKG PGRFVYTALNEPTIDYGFQRLQKVIPRHPGDPERL
Sbjct: 306 TPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYTALNEPTIDYGFQRLQKVIPRHPGDPERL 365
Query: 364 PKEVLLKRAADLAEALYGVPGSNQELLLKRAADVAEALYSTPRAPGPLAPLAPSHPHPAV 423
PKEVLLKRAADL EALYG+P +NQE++LKRAAD+AEALYS PR + L + H +
Sbjct: 366 PKEVLLKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHNQIPTLGNNPAHTGM 425
Query: 424 VGINAFSSPLAIAVGDAT-PGPEPGYARSCSSASPRGFAPSPGSQQSGYGGGLGAGLGGY 482
+G+N+FSS LA+ V + + + GY+R+ SS SPRG+ PS QQS Y + + GY
Sbjct: 426 MGVNSFSSQLAVNVSETSQANDQVGYSRNTSSVSPRGYVPSSTPQQSNY-NTVSTSMNGY 484
Query: 483 GAPGVAGLGVPGSPSFLNGSTATSPFAIMPSSPPLAAASSMSLPAAAPTTSVFSFSPVNM 542
G+ +A LGVPGSP FLNGS+A SP+
Sbjct: 485 GSGAMASLGVPGSPGFLNGSSANSPY---------------------------------- 510
Query: 543 ISAVKQRSAFAPVLRPPSSPPQACPRAHGEGLPDQS 578
+KQ+SAFAPV+RP +SPP +C A+G GL S
Sbjct: 511 --GMKQKSAFAPVVRPQASPPPSCTSANGNGLQAMS 544
>gi|113930703 early B-cell factor 2 [Homo sapiens]
Length = 575
Score = 828 bits (2139), Expect = 0.0
Identities = 411/572 (71%), Positives = 472/572 (82%), Gaps = 14/572 (2%)
Query: 2 DALPRSGLNLKEEPLLPAGLGSVRSWMQGAGILDASTAAQSGVGLARAHFEKQPPSNLRK 61
D L R G LKE+ L A + SVRSW++ G++DA+ AAQSGV L+RAHFEKQPPSNLRK
Sbjct: 6 DTLGR-GPTLKEKSL-GAEMDSVRSWVRNVGVVDANVAAQSGVALSRAHFEKQPPSNLRK 63
Query: 62 SNFFHFVLAMYDRQGQPVEVERTAFIDFVEKDREPGAEKTNNGIHYRLRLVYNNGLRTEQ 121
SNFFHFVLA+YDRQGQPVE+ERTAF+DFVE D+E G EKTNNG HY+L+L+Y+NG+RTEQ
Sbjct: 64 SNFFHFVLALYDRQGQPVEIERTAFVDFVENDKEQGNEKTNNGTHYKLQLLYSNGVRTEQ 123
Query: 122 DLYVRLIDSMSKQAIIYEGQDKNPEMCRVLLTHEIMCSRCCDRKSCGNRNETPSDPVIID 181
DLYVRLIDS++KQ I YEGQ+KNPEMCRVLLTHE+MCSRCC++KSCGNRNETPSDPVIID
Sbjct: 124 DLYVRLIDSVTKQPIAYEGQNKNPEMCRVLLTHEVMCSRCCEKKSCGNRNETPSDPVIID 183
Query: 182 RFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVSVDGHVLAVSDNMFVHNNSKHGRRA 241
RFFLKFFLKCNQNCLK AGNPRDMRRFQVV+STTV+VDGHVLAVSDNMFVHNNSKHGRRA
Sbjct: 184 RFFLKFFLKCNQNCLKTAGNPRDMRRFQVVLSTTVNVDGHVLAVSDNMFVHNNSKHGRRA 243
Query: 242 RRLDPSEAATPCIKAISPGEGWTTGGATVIVIGDNFFDGLQVVFGNVLVWSELITPHAIR 301
RRLDPSE ATPCIKAISP EGWTTGGA VI+IGDNFFDGLQVVFG +LVWSELITPHAIR
Sbjct: 244 RRLDPSE-ATPCIKAISPSEGWTTGGAMVIIIGDNFFDGLQVVFGTMLVWSELITPHAIR 302
Query: 302 VQTPPRHIPGVVEVTLSYKSKQFCKGCPGRFVYTALNEPTIDYGFQRLQKVIPRHPGDPE 361
VQTPPRHIPGVVEVTLSYKSKQFCKG PGRF+YTALNEPTIDYGFQRLQKVIPRHPGDPE
Sbjct: 303 VQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFIYTALNEPTIDYGFQRLQKVIPRHPGDPE 362
Query: 362 RLPKEVLLKRAADLAEALYGVPGSNQELLLKRAADVAEALYSTPRAPGPLAPLAPSHPHP 421
RL KE+LLKRAADL EALYG P +NQ+++LKRAAD+AEALYS PR P L L+ S H
Sbjct: 363 RLAKEMLLKRAADLVEALYGTPHNNQDIILKRAADIAEALYSVPRNPSQLPALSSSPAHS 422
Query: 422 AVVGINAFSSPLAIAVGDATPGPEPGYARSCSSASPRGFAPSPGSQQSGYGGGLGAGLGG 481
++GIN++ S L +++ ++T G GY R+ SS SPRG++ S QQS Y + + G
Sbjct: 423 GMMGINSYGSQLGVSISESTQGNNQGYIRNTSSISPRGYSSSSTPQQSNYSTSSNS-MNG 481
Query: 482 YGAPGVAGLGVPGSPSFLNGSTATSPFAIMPSSPPLAAASSMSLPAAAPTTSVFSFSPVN 541
Y +A LGVPGSP FLNGS SP+ IM SSP + ++S T+S+ FS +
Sbjct: 482 YSNVPMANLGVPGSPGFLNGSPTGSPYGIMSSSPTVGSSS---------TSSILPFSS-S 531
Query: 542 MISAVKQRSAFAPVLRPPSSPPQACPRAHGEG 573
+ AVKQ+SAFAPV+RP SP AC +G G
Sbjct: 532 VFPAVKQKSAFAPVIRPQGSPSPACSSGNGNG 563
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 52.4 bits (124), Expect = 1e-06
Identities = 56/197 (28%), Positives = 64/197 (32%), Gaps = 40/197 (20%)
Query: 405 PRAPGPLAPLAPSHPHPAVVGI------NAFSSPLAIAVGDATPGPEPGYARSCSSASPR 458
P P P PL P+ P P + +A S A GPEP A A P
Sbjct: 105 PGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPA 164
Query: 459 GFAPSPGSQQSGYGGGLGAGLGGYGAPGVAGLGVPGSPSFLNGSTA-------------- 504
A G G G G G G G PG PG+ LNGS A
Sbjct: 165 ALAARAGP---GPGPGPGPGPG----PGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSL 217
Query: 505 --TSPFAIMPSSPPLAAASSMSLP----AAAPTTSVFSFSPVNMISAVKQRSAFAPVLRP 558
P A++P P A + + P AAAP P A AP P
Sbjct: 218 VNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPA-------APAAAP 270
Query: 559 PSSPPQACPRAHGEGLP 575
P PP A G P
Sbjct: 271 PPPPPAPATLARPPGHP 287
Score = 50.1 bits (118), Expect = 6e-06
Identities = 51/178 (28%), Positives = 69/178 (38%), Gaps = 25/178 (14%)
Query: 394 AADVAEALYSTPRAPGPLAP-LAPSHPHPAVVGINAFSSPLAIAVGDATPGPEPGYARSC 452
AA A A S P AP P AP AP P PA + P G T P +
Sbjct: 247 AAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPA---TLARPPGHPAGPPTAAPAVPPPAAA 303
Query: 453 SSASPRGFAPSPGSQQSGYGGGLGAGLGGYGAPGVAGLGVPGSPSFLNGSTATSPFAIMP 512
+ G AP+P G AG+ G PG A +P+ G A SP ++
Sbjct: 304 QNGGSAGAAPAPAPAAGG-----PAGVSGQPGPGAAA----AAPA--PGVKAESPKRVVQ 352
Query: 513 SSPPLAAASSMSLPAAAPTTSVFSFSPVNMISAVKQRSAFAPVLRPPSSP--PQACPR 568
++PP A + S PA+ + V I Q + +P PP +P P P+
Sbjct: 353 AAPPAAQTLAASGPASTAASMV--------IGPTMQGALPSPAAVPPPAPGTPTGLPK 402
>gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo
sapiens]
Length = 288
Score = 47.8 bits (112), Expect = 3e-05
Identities = 48/185 (25%), Positives = 70/185 (37%), Gaps = 12/185 (6%)
Query: 381 GVPGSNQELLLKRAADVAEALYSTPRAPGPLAPLAPSHPHPAVVGINAFSSPLAIAVGDA 440
G P + + AAD + A P + P+ P G P A A+
Sbjct: 111 GPPAAAPAAVCPAAADPSAASLCAASPPAAVPAAVPAAVRPPAAG------PPAAALAAV 164
Query: 441 TPGPEPGYARSCSSASPRGFAPSPGSQQSGYGGGLGAGLGGYGAPGVAGLGVPGSPSFLN 500
P A S +ASP P+ S + + G G A + P +
Sbjct: 165 YPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAA 224
Query: 501 GSTATSPFAIMPSSPPLAAASSMSLPAAAPTTSVFSFSPVNMISAVKQRSAFAPVLRPPS 560
A +P A+ P+ AAA + + PAAA SV + SP + A+ Q +F P P +
Sbjct: 225 SPAAAAPLAVNPA----AAARAAAAPAAACVQSV-AESPATPL-AIAQPVSFPPAPVPCA 278
Query: 561 SPPQA 565
PP A
Sbjct: 279 VPPLA 283
Score = 32.7 bits (73), Expect = 0.98
Identities = 55/211 (26%), Positives = 78/211 (36%), Gaps = 41/211 (19%)
Query: 382 VPGSNQELLLKRAADVAEALYSTPRAPGPLAPLA--PSHPHPAVVGINAFSSPLAI--AV 437
VP + + R A A+ P AP A P+ P+ + A S P A+ AV
Sbjct: 86 VPSALTRAVAWRPAAAPAAVRPPAAGPPAAAPAAVCPAAADPSAASLCAASPPAAVPAAV 145
Query: 438 GDATPGPEPGY-ARSCSSASPRGFAPSPGSQQSGYGGGLGAGLGGYGAPGVAGLGVPGSP 496
A P G A + ++ P PS S + A +A + SP
Sbjct: 146 PAAVRPPAAGPPAAALAAVYPAAADPSAASLCA--------------ASPLAAVPAAASP 191
Query: 497 SFLNGSTATSPFAIMPSSPPLAAASSMSLPAAAP-TTSVFSFSPVNMISAVKQRSAFAP- 554
+ + A P A PS+ L AAS PAA P S + +P+ + A R+A AP
Sbjct: 192 AAV-APAAVCPGAAGPSAASLCAASQ---PAAVPAAASPAAAAPLAVNPAAAARAAAAPA 247
Query: 555 ----------------VLRPPSSPPQACPRA 569
+ +P S PP P A
Sbjct: 248 AACVQSVAESPATPLAIAQPVSFPPAPVPCA 278
>gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens]
Length = 753
Score = 47.8 bits (112), Expect = 3e-05
Identities = 62/227 (27%), Positives = 87/227 (38%), Gaps = 38/227 (16%)
Query: 398 AEALYSTPRAPGPLAPLAPSHPHPAVVGINAFSSPLAIAVGDATPGPEPGYARSCSSASP 457
A AL +TP G AP AP P+ +G A +P + TP P YA++ + +P
Sbjct: 331 ASALSTTPGNNGVPAPAAP----PSALGPKASPAP---SHNSGTPAP---YAQAVAPPAP 380
Query: 458 RGFA---PSPGSQQSGYGGGLGAGLGGYGAPGVAGLG---------------VPGSP--- 496
G + P P S Q GGG G+G GG + + G V SP
Sbjct: 381 SGPSTTQPRPPSVQPSGGGGGGSGGGGSSSSSNSSAGGGAGKQNGATSYSSVVADSPAEV 440
Query: 497 --SFLNGSTATSPFAIMPSSPPLAAASSMSLPAAAPTTSVFSFSPVNMISAVKQRSAFAP 554
S G+ A+S PS P S+ P+AA T +P + ++
Sbjct: 441 ALSSSGGNNASSQALGPPSGPHNPPPSTSKEPSAAAPTGAGGVAPGSGNNSGGPSLLVPL 500
Query: 555 VLRPPSSPPQACPRAHGEGL-----PDQSFEDSDKFHSPARGLQGLA 596
+ PPSSP + A G P S K P L+ +A
Sbjct: 501 PVNPPSSPTPSFSDAKAAGALLNGPPQFSTAPEIKAPEPLSSLKSMA 547
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 46.6 bits (109), Expect = 7e-05
Identities = 54/203 (26%), Positives = 74/203 (36%), Gaps = 25/203 (12%)
Query: 355 RHPGDPERLPKEVLLKRAADLAEALYGVPGSNQELLLKRAADVAEALYSTPRAPGPLAPL 414
R P P PK VL + L + P S + L + + + TP P P
Sbjct: 1219 RKPAKPPVSPKPVLTQPVPKLQGS--PTPTSKKVPLPGPGSPEVKRAHGTPPPVSPKPPP 1276
Query: 415 APSHPHP--AVVGINAFSSPLAIAVGDATPGPEPGYARSCSSASPRGFAPSPGSQQSGYG 472
P+ P P AV G+ + G A P P P AR P A PG+ S
Sbjct: 1277 PPTAPKPVKAVAGLPS---------GSAGPSPAPSPARQ----PPAALAKPPGTPPS--- 1320
Query: 473 GGLGAGLGGYGAPGVAGLGVPGSPSFLNGSTATSPFAIMPSSPPLAAASSMSLPAAAPTT 532
LGA +PG L VP P + A + A P +PP A+ S T
Sbjct: 1321 --LGASPAKPPSPGAPALHVPAKPP--RAAAAAAAAAAAPPAPPEGASPGDSARQKLEET 1376
Query: 533 SVFSFSPVNMI-SAVKQRSAFAP 554
S + + + ++Q A P
Sbjct: 1377 SACLAAALQAVEEKIRQEDAQGP 1399
Score = 30.0 bits (66), Expect = 6.3
Identities = 46/164 (28%), Positives = 58/164 (35%), Gaps = 15/164 (9%)
Query: 413 PLAPSHPHPAVVGINAFSSPLAIAVGDATPGPEPGYARSCSSASPRGFAPSPGSQQSGYG 472
P P+ P P + A PL G+A +P S P P P Q S
Sbjct: 1194 PPPPAEPPPTDL---AHLPPLPPPEGEARKPAKPPV-----SPKPVLTQPVPKLQGSPTP 1245
Query: 473 GGLGAGLGGYGAPGVA---GLGVPGSPSFLNGSTATSPFAIMPSSPPLAAASSMS-LPAA 528
L G G+P V G P SP TA P + P +A S + PA
Sbjct: 1246 TSKKVPLPGPGSPEVKRAHGTPPPVSPKPPPPPTAPKPVKAVAGLPSGSAGPSPAPSPAR 1305
Query: 529 APTTSVFS---FSPVNMISAVKQRSAFAPVLRPPSSPPQACPRA 569
P ++ P S K S AP L P+ PP+A A
Sbjct: 1306 QPPAALAKPPGTPPSLGASPAKPPSPGAPALHVPAKPPRAAAAA 1349
>gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor [Homo
sapiens]
Length = 1336
Score = 44.7 bits (104), Expect = 2e-04
Identities = 57/193 (29%), Positives = 66/193 (34%), Gaps = 32/193 (16%)
Query: 403 STPRAPGPLAPLAPSHPHPAVVGINAFSSPLAIAVGDATPGPEPGYARSCSS-------- 454
S AP P P P P P+ A+ +P PGP P R +S
Sbjct: 898 SAEAAPPPAKPPPPPQPLPSP----AYPAPRP------APGPAPFVPRERASVDRWRRTK 947
Query: 455 -ASPRGFAPSPGSQQSGYGG----GLGAGLGGYGAPGVAGLGVPGSPSFLNGSTATSP-- 507
A P G A YG GLG GLG A G P SP P
Sbjct: 948 GAGPPGGAGLADGFHRYYGPIEPQGLGLGLGEARAAPRGAAGRPLSPPAAQPPQKPPPSY 1007
Query: 508 FAIM----PSSPPLAAASSMSLPAAAPTTSVFSFSPVNMISAVKQRSAFAPVLRP---PS 560
FAI+ P+ PP A P A P + + P A + S AP P P
Sbjct: 1008 FAIVRDKEPAEPPAGAFPGFPSPPAPPAAAATAVGPPLCRLAFEDESPPAPARWPRSDPE 1067
Query: 561 SPPQACPRAHGEG 573
S P P A G G
Sbjct: 1068 SQPLLGPGAGGAG 1080
Score = 37.0 bits (84), Expect = 0.052
Identities = 30/109 (27%), Positives = 38/109 (34%), Gaps = 17/109 (15%)
Query: 408 PGPLAPLAPSHPHPAVVGINAFSSPLA-IAVGDATPGPEPGYARSCSSASPRGFAPSPGS 466
P P PS P P A PL +A D +P + RS + P
Sbjct: 1020 PAGAFPGFPSPPAPPAAAATAVGPPLCRLAFEDESPPAPARWPRSDPESQPL-------- 1071
Query: 467 QQSGYGGGLGAGLGGYGAPGVAGLGVPGSPSFLNGSTATSPFAIMPSSP 515
LG G GG G G AG G P +P + P+ + SP
Sbjct: 1072 --------LGPGAGGAGGTGGAGGGAPAAPPPCRAAPPPCPYLDLEPSP 1112
>gi|149158696 HLA-B associated transcript-3 isoform b [Homo sapiens]
Length = 1126
Score = 43.1 bits (100), Expect = 7e-04
Identities = 52/184 (28%), Positives = 73/184 (39%), Gaps = 32/184 (17%)
Query: 354 PRHPGDPERLPKEVLLKRA-----ADLAEALYGVPGSNQELLLKRAADVAEALYSTPRAP 408
P HPG P P L+ A A LA+ + G+ G LL + VA+ P
Sbjct: 508 PSHPGGP---PVSGTLQGAGLGTNASLAQMVSGLVGQ----LLMQPVLVAQG------TP 554
Query: 409 GPLAPLAPSHPHPAVVGINAFSSPLAIAVGDATPGPEPGYARSCSSASPRGFAPSPGSQQ 468
G P P PA +A ++ A G A GP S + F+ G+
Sbjct: 555 GMAPP-----PAPATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLGNLL 609
Query: 469 SGYGGGLGAGLGGYGAPGVAGLGVPGSPSFLNG------STATSPFAIMPSSPPLAAASS 522
G GAG G +P + + +PG P+FL G +T T+P P PP A
Sbjct: 610 GP--AGPGAGGSGVASPTIT-VAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPPPPAPEQ 666
Query: 523 MSLP 526
++P
Sbjct: 667 QTMP 670
Score = 33.5 bits (75), Expect = 0.57
Identities = 45/191 (23%), Positives = 64/191 (33%), Gaps = 32/191 (16%)
Query: 383 PGSNQELLLKRAADVAEALYSTPRAPGPLAPLAPSHPHPAVVGINAFSSPLAIAVGDATP 442
PG Q + ++ E+ PGP P A SHP + + + + +
Sbjct: 399 PGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDS 458
Query: 443 GPEPGYARSCSSASPRGFAPSPGSQQSGYGGGLGAGLGGYGAPGVAGLGVPGSPSFLNGS 502
G +PG S +P G PG Q+ G VPG P
Sbjct: 459 GTQPGGVPS----APTGPLGPPGHGQT------------------LGQQVPGFP------ 490
Query: 503 TATSPFAIMPSSPPLAAASSMSLPAAAPTTSVFSF----SPVNMISAVKQRSAFAPVLRP 558
TA + I +PP A S P + T S M+S + + PVL
Sbjct: 491 TAPTRVVIARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVA 550
Query: 559 PSSPPQACPRA 569
+P A P A
Sbjct: 551 QGTPGMAPPPA 561
>gi|18375632 HLA-B associated transcript-3 isoform b [Homo sapiens]
Length = 1126
Score = 43.1 bits (100), Expect = 7e-04
Identities = 52/184 (28%), Positives = 73/184 (39%), Gaps = 32/184 (17%)
Query: 354 PRHPGDPERLPKEVLLKRA-----ADLAEALYGVPGSNQELLLKRAADVAEALYSTPRAP 408
P HPG P P L+ A A LA+ + G+ G LL + VA+ P
Sbjct: 508 PSHPGGP---PVSGTLQGAGLGTNASLAQMVSGLVGQ----LLMQPVLVAQG------TP 554
Query: 409 GPLAPLAPSHPHPAVVGINAFSSPLAIAVGDATPGPEPGYARSCSSASPRGFAPSPGSQQ 468
G P P PA +A ++ A G A GP S + F+ G+
Sbjct: 555 GMAPP-----PAPATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLGNLL 609
Query: 469 SGYGGGLGAGLGGYGAPGVAGLGVPGSPSFLNG------STATSPFAIMPSSPPLAAASS 522
G GAG G +P + + +PG P+FL G +T T+P P PP A
Sbjct: 610 GP--AGPGAGGSGVASPTIT-VAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPPPPAPEQ 666
Query: 523 MSLP 526
++P
Sbjct: 667 QTMP 670
Score = 33.5 bits (75), Expect = 0.57
Identities = 45/191 (23%), Positives = 64/191 (33%), Gaps = 32/191 (16%)
Query: 383 PGSNQELLLKRAADVAEALYSTPRAPGPLAPLAPSHPHPAVVGINAFSSPLAIAVGDATP 442
PG Q + ++ E+ PGP P A SHP + + + + +
Sbjct: 399 PGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDS 458
Query: 443 GPEPGYARSCSSASPRGFAPSPGSQQSGYGGGLGAGLGGYGAPGVAGLGVPGSPSFLNGS 502
G +PG S +P G PG Q+ G VPG P
Sbjct: 459 GTQPGGVPS----APTGPLGPPGHGQT------------------LGQQVPGFP------ 490
Query: 503 TATSPFAIMPSSPPLAAASSMSLPAAAPTTSVFSF----SPVNMISAVKQRSAFAPVLRP 558
TA + I +PP A S P + T S M+S + + PVL
Sbjct: 491 TAPTRVVIARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVA 550
Query: 559 PSSPPQACPRA 569
+P A P A
Sbjct: 551 QGTPGMAPPPA 561
>gi|18375630 HLA-B associated transcript-3 isoform b [Homo sapiens]
Length = 1126
Score = 43.1 bits (100), Expect = 7e-04
Identities = 52/184 (28%), Positives = 73/184 (39%), Gaps = 32/184 (17%)
Query: 354 PRHPGDPERLPKEVLLKRA-----ADLAEALYGVPGSNQELLLKRAADVAEALYSTPRAP 408
P HPG P P L+ A A LA+ + G+ G LL + VA+ P
Sbjct: 508 PSHPGGP---PVSGTLQGAGLGTNASLAQMVSGLVGQ----LLMQPVLVAQG------TP 554
Query: 409 GPLAPLAPSHPHPAVVGINAFSSPLAIAVGDATPGPEPGYARSCSSASPRGFAPSPGSQQ 468
G P P PA +A ++ A G A GP S + F+ G+
Sbjct: 555 GMAPP-----PAPATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLGNLL 609
Query: 469 SGYGGGLGAGLGGYGAPGVAGLGVPGSPSFLNG------STATSPFAIMPSSPPLAAASS 522
G GAG G +P + + +PG P+FL G +T T+P P PP A
Sbjct: 610 GP--AGPGAGGSGVASPTIT-VAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPPPPAPEQ 666
Query: 523 MSLP 526
++P
Sbjct: 667 QTMP 670
Score = 33.5 bits (75), Expect = 0.57
Identities = 45/191 (23%), Positives = 64/191 (33%), Gaps = 32/191 (16%)
Query: 383 PGSNQELLLKRAADVAEALYSTPRAPGPLAPLAPSHPHPAVVGINAFSSPLAIAVGDATP 442
PG Q + ++ E+ PGP P A SHP + + + + +
Sbjct: 399 PGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDS 458
Query: 443 GPEPGYARSCSSASPRGFAPSPGSQQSGYGGGLGAGLGGYGAPGVAGLGVPGSPSFLNGS 502
G +PG S +P G PG Q+ G VPG P
Sbjct: 459 GTQPGGVPS----APTGPLGPPGHGQT------------------LGQQVPGFP------ 490
Query: 503 TATSPFAIMPSSPPLAAASSMSLPAAAPTTSVFSF----SPVNMISAVKQRSAFAPVLRP 558
TA + I +PP A S P + T S M+S + + PVL
Sbjct: 491 TAPTRVVIARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVA 550
Query: 559 PSSPPQACPRA 569
+P A P A
Sbjct: 551 QGTPGMAPPPA 561
>gi|149158692 HLA-B associated transcript-3 isoform a [Homo sapiens]
Length = 1132
Score = 43.1 bits (100), Expect = 7e-04
Identities = 52/184 (28%), Positives = 73/184 (39%), Gaps = 32/184 (17%)
Query: 354 PRHPGDPERLPKEVLLKRA-----ADLAEALYGVPGSNQELLLKRAADVAEALYSTPRAP 408
P HPG P P L+ A A LA+ + G+ G LL + VA+ P
Sbjct: 514 PSHPGGP---PVSGTLQGAGLGTNASLAQMVSGLVGQ----LLMQPVLVAQG------TP 560
Query: 409 GPLAPLAPSHPHPAVVGINAFSSPLAIAVGDATPGPEPGYARSCSSASPRGFAPSPGSQQ 468
G P P PA +A ++ A G A GP S + F+ G+
Sbjct: 561 GMAPP-----PAPATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLGNLL 615
Query: 469 SGYGGGLGAGLGGYGAPGVAGLGVPGSPSFLNG------STATSPFAIMPSSPPLAAASS 522
G GAG G +P + + +PG P+FL G +T T+P P PP A
Sbjct: 616 GP--AGPGAGGSGVASPTIT-VAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPPPPAPEQ 672
Query: 523 MSLP 526
++P
Sbjct: 673 QTMP 676
Score = 33.5 bits (75), Expect = 0.57
Identities = 45/191 (23%), Positives = 64/191 (33%), Gaps = 32/191 (16%)
Query: 383 PGSNQELLLKRAADVAEALYSTPRAPGPLAPLAPSHPHPAVVGINAFSSPLAIAVGDATP 442
PG Q + ++ E+ PGP P A SHP + + + + +
Sbjct: 405 PGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDS 464
Query: 443 GPEPGYARSCSSASPRGFAPSPGSQQSGYGGGLGAGLGGYGAPGVAGLGVPGSPSFLNGS 502
G +PG S +P G PG Q+ G VPG P
Sbjct: 465 GTQPGGVPS----APTGPLGPPGHGQT------------------LGQQVPGFP------ 496
Query: 503 TATSPFAIMPSSPPLAAASSMSLPAAAPTTSVFSF----SPVNMISAVKQRSAFAPVLRP 558
TA + I +PP A S P + T S M+S + + PVL
Sbjct: 497 TAPTRVVIARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVA 556
Query: 559 PSSPPQACPRA 569
+P A P A
Sbjct: 557 QGTPGMAPPPA 567
>gi|110556644 zinc finger protein, multitype 1 [Homo sapiens]
Length = 1006
Score = 43.1 bits (100), Expect = 7e-04
Identities = 49/164 (29%), Positives = 60/164 (36%), Gaps = 31/164 (18%)
Query: 408 PGPLAPLAPSHPHPAV-VGINAFSSPLAIAVGDATPGPEPGYARSCSSASPRGFAPSPGS 466
PGP P AP P PA V + A P P PG+A P+P S
Sbjct: 721 PGPPGPAAPPAPSPAAPVRTRRRRKLYELHAAGAPPPPPPGHA------------PAPES 768
Query: 467 QQSGYGGGLGAGLGGYGAPGVAGLGVPGSPSFLNGSTATSPFAIMPSSPPLAAASSMSLP 526
+ G G G G GL +PG A G P L + P +P +P A A
Sbjct: 769 PRPGSGSGSGPGLAPARSPGPAADG----PIDL----SKKPRRPLPGAPAPALADYHECT 820
Query: 527 AAAPTTSVFSFSPVNMISAVKQRSAFAPVLRPPSS---PPQACP 567
A SF + A K+ S P PP + P ACP
Sbjct: 821 ACR-----VSFHSLEAYLAHKKYS--CPAAPPPGALGLPAAACP 857
>gi|134142824 forkhead box D2 [Homo sapiens]
Length = 495
Score = 43.1 bits (100), Expect = 7e-04
Identities = 59/211 (27%), Positives = 77/211 (36%), Gaps = 27/211 (12%)
Query: 327 GCPGRFVYTALNEPTIDY----GFQRLQKVIPRHP---GDPERLPKEVLLKRAADLAEAL 379
G PG+ Y L+ + D F R +K R P P P LL R A
Sbjct: 193 GNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLPPPHPHPHPHPELLLRGGAAAAGD 252
Query: 380 YG--VPGSNQELLLKRAADVAEALYSTPRAPGPLAPLAPSHPHPAVVGINAFSSPLAIAV 437
G +PG +A Y P PGP AP HPH A ++P ++V
Sbjct: 253 PGAFLPGFAAYGAYGYGYGLALPAYGAP-PPGP-APHPHPHPHAFAFAAAAAAAPCQLSV 310
Query: 438 GDATPGPEPGYARSCSSASPRGFAPSPGSQQSGYGGGLGAGLGGYGAPGVAGLGVPGSPS 497
P + S + G AP+P + SG G G PG AGL P+
Sbjct: 311 PPGRAAAPPPGPPTASVFAGAGSAPAP-APASGSGPG----------PGPAGL-----PA 354
Query: 498 FLNGSTATSPFAIMPSSPPLAAASSMSLPAA 528
FL + S P AA ++ LP A
Sbjct: 355 FLGAELGCAKAFYAASLSPPAAGTAAGLPTA 385
Score = 36.2 bits (82), Expect = 0.088
Identities = 56/220 (25%), Positives = 74/220 (33%), Gaps = 48/220 (21%)
Query: 323 QFCKGCPGRFVYTALNEPTIDYGFQRLQKV------IPRHPGDPERLPKEVLLKRAADLA 376
+ C+ GRF Y P + + IPR PG+P + L +AD+
Sbjct: 152 EICEFISGRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMF 211
Query: 377 EALYGVPGSNQELLLKRAADVAEALYSTPRAPGPLAPLAPSHPHPAVVGINAFSSPLAIA 436
+ N L +R + PL P HPHP P +
Sbjct: 212 D--------NGSFLRRRKRFKRQ-------------PLPPPHPHP-------HPHPELLL 243
Query: 437 VGDATPGPEPGYARSCSSASPRGFAPSPGSQQSGYGGGLGAGLGGYGAPGVAGLGVPGSP 496
G A +PG A GFA GYG GL G PG A P
Sbjct: 244 RGGAAAAGDPG-------AFLPGFAAYGAY---GYGYGLALPAYGAPPPGPAPHPHPHPH 293
Query: 497 SFLNGSTATSPFAIMPSSPPLAAASSMSLPAAAPTTSVFS 536
+F + A + + P AAA P PT SVF+
Sbjct: 294 AFAFAAAAAAAPCQLSVPPGRAAAP----PPGPPTASVFA 329
Score = 33.9 bits (76), Expect = 0.44
Identities = 44/154 (28%), Positives = 56/154 (36%), Gaps = 25/154 (16%)
Query: 407 APGPLAPLAPSHPHPAVVGINAF-----SSPLAIAVGDATPGPEPGYARSCSSASPRGFA 461
AP P AP + S P P G+ AF A +P P G A +A R
Sbjct: 334 APAP-APASGSGPGPGPAGLPAFLGAELGCAKAFYAASLSP-PAAGTAAGLPTALLRQGL 391
Query: 462 PSPGSQQSGYGGGLGAGL-------------GGYGAPGVAGLGVPGSP----SFLNGSTA 504
+ +G GGG GAG GG AP AG G PG P + G
Sbjct: 392 KTDAGGGAG-GGGAGAGQRPSFSIDHIMGHGGGGAAPPGAGEGSPGPPFAAAAGPGGQAQ 450
Query: 505 TSPFAIMPSSPPLAAASSMSLPAAAPTTSVFSFS 538
P+ P+A +S P A +S F+
Sbjct: 451 VLAMLTAPALAPVAGHIRLSHPGDALLSSGSRFA 484
>gi|24497504 forkhead box A2 isoform 2 [Homo sapiens]
Length = 457
Score = 42.7 bits (99), Expect = 0.001
Identities = 37/108 (34%), Positives = 50/108 (46%), Gaps = 11/108 (10%)
Query: 425 GINAFSSPLAIAVGDATPGPEPGYARSCSSASPRGFAPSPGSQQSGYGGGLGAGLGG-YG 483
G+N + S A A+G + G S + +S G SP G G AG+GG G
Sbjct: 39 GMNTYMSMSAAAMGSGSGNMSAG---SMNMSSYVGAGMSPSLAGMSPGAGAMAGMGGSAG 95
Query: 484 APGVAGLGVPGSPSF--LNGSTA-----TSPFAIMPSSPPLAAASSMS 524
A GVAG+G SPS L G A +P+A M S P+ + +S
Sbjct: 96 AAGVAGMGPHLSPSLSPLGGQAAGAMGGLAPYANMNSMSPMYGQAGLS 143
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 42.7 bits (99), Expect = 0.001
Identities = 45/167 (26%), Positives = 65/167 (38%), Gaps = 36/167 (21%)
Query: 405 PRAPGPLAPLAPSHP-HPAVVGINAFSSPLAIAVGDATPGPEPGYARSCSSASPRGFAPS 463
P+ P P LAPS P HP + +++ P A TP P+P SC + PR
Sbjct: 2349 PQEPPPAQALAPSPPSHPDIFRPGSYTDPYAQP--PLTPRPQPPPPESCCALPPRSLPSD 2406
Query: 464 PGSQQSGYGGGLGAGLGGYGAPGVAGLGVPGSPSFLNGSTATSPFAIMPSSPPLAAASSM 523
P S+ VP SP + S++ SP P S S +
Sbjct: 2407 PFSR------------------------VPASPQ--SQSSSQSPLTPRPLSAEAFCPSPV 2440
Query: 524 SLPAAAPTTSVFSFSPVNMISAVKQRSAFAPVLRPP-SSPPQACPRA 569
+ +P +S P S + R FAP+ +PP PP+ +A
Sbjct: 2441 TPRFQSP--DPYSRPP----SRPQSRDPFAPLHKPPRPQPPEVAFKA 2481
Score = 33.5 bits (75), Expect = 0.57
Identities = 57/258 (22%), Positives = 76/258 (29%), Gaps = 63/258 (24%)
Query: 383 PGSNQELLLKRAADV-AEALYSTPRAPGPLAPLAPSHP--------HPAVVGINAFSSPL 433
P S EL LK V A+ P P PL P P +P+ G A P
Sbjct: 2153 PDSPGELFLKLPPQVPAQVPSQDPFGLAPAYPLEPRFPTAPPTYPPYPSPTGAPA--QPP 2210
Query: 434 AIAVGDATPGPEPGYARSCSSASPRGFAPSPGS---------------QQSGYGGG---- 474
+ +PG + +PR +P + G GGG
Sbjct: 2211 MLGASSRPGAGQPGEFHTTPPGTPRHQPSTPDPFLKPRCPSLDNLAVPESPGVGGGKASE 2270
Query: 475 ---------------------LGAGLGGYGAPGVAGLGVPGSPSFLNGSTATSP------ 507
LGA YG P + + P S + L G +P
Sbjct: 2271 PLLSPPPFGESRKALEVKKEELGASSPSYGPPNLGFVDSPSSGTHLGGLELKTPDVFKAP 2330
Query: 508 -----FAIMPSSPPLAAASSMSLPAAAPTTSVFSFSPVNMISAVKQRSAFAPVL-RPPSS 561
+ P SP L PA A S S + + A P+ RP
Sbjct: 2331 LTPRASQVEPQSPGLGLRPQEPPPAQALAPSPPSHPDIFRPGSYTDPYAQPPLTPRPQPP 2390
Query: 562 PPQACPRAHGEGLPDQSF 579
PP++C LP F
Sbjct: 2391 PPESCCALPPRSLPSDPF 2408
>gi|12707580 paired-like homeobox 2b [Homo sapiens]
Length = 314
Score = 42.7 bits (99), Expect = 0.001
Identities = 31/93 (33%), Positives = 40/93 (43%), Gaps = 1/93 (1%)
Query: 439 DATPGPEPGYARSCSSASPRGFAPSPGSQQS-GYGGGLGAGLGGYGAPGVAGLGVPGSPS 497
D++ E A+S S G P+P S G GG G G GAPG AG G PG
Sbjct: 177 DSSRDDESKEAKSTDPDSTGGPGPNPNPTPSCGANGGGGGGPSPAGAPGAAGPGGPGGEP 236
Query: 498 FLNGSTATSPFAIMPSSPPLAAASSMSLPAAAP 530
G+ A + A ++ AAA+ A P
Sbjct: 237 GKGGAAAAAAAAAAAAAAAAAAAAGGLAAAGGP 269
>gi|194394143 forkhead box A2 isoform 1 [Homo sapiens]
Length = 463
Score = 42.7 bits (99), Expect = 0.001
Identities = 37/108 (34%), Positives = 50/108 (46%), Gaps = 11/108 (10%)
Query: 425 GINAFSSPLAIAVGDATPGPEPGYARSCSSASPRGFAPSPGSQQSGYGGGLGAGLGG-YG 483
G+N + S A A+G + G S + +S G SP G G AG+GG G
Sbjct: 45 GMNTYMSMSAAAMGSGSGNMSAG---SMNMSSYVGAGMSPSLAGMSPGAGAMAGMGGSAG 101
Query: 484 APGVAGLGVPGSPSF--LNGSTA-----TSPFAIMPSSPPLAAASSMS 524
A GVAG+G SPS L G A +P+A M S P+ + +S
Sbjct: 102 AAGVAGMGPHLSPSLSPLGGQAAGAMGGLAPYANMNSMSPMYGQAGLS 149
>gi|45439359 triple functional domain (PTPRF interacting) [Homo
sapiens]
Length = 3097
Score = 42.7 bits (99), Expect = 0.001
Identities = 42/131 (32%), Positives = 57/131 (43%), Gaps = 18/131 (13%)
Query: 467 QQSGYGGGLGAGLGGYGAPGVAGLGVPGSPSFLNGSTATSPFAIMPSSPPLAAASSMSLP 526
Q++ GGG G G GG G G +G G G+PS +G + PSS A ++S S P
Sbjct: 2287 QRNHSGGGGGGGSGGSGGGGGSGGG--GAPSGGSGHSGG------PSSCGGAPSTSRSRP 2338
Query: 527 AAAPTTSVFSFSPVNMISAVKQR---------SAFAPVLRPPSSPPQACPRAHGEGLPDQ 577
+ P V PV + SA + S P L PP + P+A P A P
Sbjct: 2339 SRIP-QPVRHHPPVLVSSAASSQAEADKMSGTSTPGPSLPPPGAAPEAGPSAPSRRPPGA 2397
Query: 578 SFEDSDKFHSP 588
E S++ P
Sbjct: 2398 DAEGSEREAEP 2408
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 42.7 bits (99), Expect = 0.001
Identities = 59/198 (29%), Positives = 77/198 (38%), Gaps = 27/198 (13%)
Query: 404 TPRAPGPLAP----LAPSH-PHPAVVGINAFSSPLAIAVGDATPGPEPGYARSCSSASPR 458
TP A PL+P L P P P+VV + G ATP P+ A S +S+SP+
Sbjct: 866 TPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKE------GPATPAPKQAPALSMTSSSPK 919
Query: 459 GFAPSPGSQQSGYGGGLGAGLGGYGAPGVAGLGVP---GSPSFLNGSTATSPFAIMPSSP 515
+P + G+ A GAP P G P+ + A +P A P SP
Sbjct: 920 KARATPAPK------GIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSP 973
Query: 516 PLAAASSMSLPAAAPT-TSVFSFSPVNMISAVKQRSAFAPVLRPPSSP---PQACPRAHG 571
A+ P APT + SP + + A P P SP P A P G
Sbjct: 974 KGGPATPS--PKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKG 1031
Query: 572 EGLPDQSFEDSDKFHSPA 589
P + S K SPA
Sbjct: 1032 ASTPPAATPPSPK-GSPA 1048
Score = 33.5 bits (75), Expect = 0.57
Identities = 36/132 (27%), Positives = 47/132 (35%), Gaps = 17/132 (12%)
Query: 403 STPRAPGPLAPLAPSHPHPAVVGINAFSSPLAIAVGDAT--PGPEPGYARSCSSASPRGF 460
+TP G AP P+ P+ G A SP A P P+ G A +P
Sbjct: 1187 ATPSPKG--APTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTP 1244
Query: 461 APSPGSQQSGYGGGLGAGLGGYGAPGVAGLGVP--GSPSFLNGSTATSPFAIMPSSPPLA 518
A +P S + GG P G P +P L G AT P P+ +
Sbjct: 1245 AATPPSPK-----------GGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVT 1293
Query: 519 AASSMSLPAAAP 530
S PA +P
Sbjct: 1294 PPSPKGGPATSP 1305
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 42.4 bits (98), Expect = 0.001
Identities = 50/171 (29%), Positives = 69/171 (40%), Gaps = 26/171 (15%)
Query: 409 GPLAPLAPSHPHPAVVGINAFSSPLAIAVGDAT--------PGPEPGYARSCS-----SA 455
GP P P P V +A S + V + PGP P R+ S +A
Sbjct: 593 GPQGAPYPFPPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPYGKRAPSPGAYKTA 652
Query: 456 SPRGFAPSPGSQQSGYGGGLGAGLGGYGAPGVAGLGVPGSPSFLNGSTATSPFAIMPSSP 515
+P G+ PGS S + G G G P G PGSP+ G + + +PS P
Sbjct: 653 TPPGY--KPGSPPS-FRTGTPPGYRGTSPPAGPGTFKPGSPTVGPGPLPPAGPSGLPSLP 709
Query: 516 PLAAASSMSLPAAAPTTSVFSFSPVNMISAVKQRSAFAPV--LRPPSSPPQ 564
P AA PA+ P S + + A + + +PV R PS PP+
Sbjct: 710 PPPAA-----PASGPPLSA---TQIKQEPAEEYETPESPVPPARSPSPPPK 752
Score = 35.8 bits (81), Expect = 0.12
Identities = 44/181 (24%), Positives = 68/181 (37%), Gaps = 19/181 (10%)
Query: 404 TPRAPG--PLAPLAPSHPHPAVV--GINAFSSPLAIAVGDATPGPEPGYARSCSSASPRG 459
+P+ P P P A PHP+V G +A P + A PG P + + +
Sbjct: 168 SPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPPGAPPPHPQLYPGGTGGV 227
Query: 460 FAPSP-GSQQSGYGGGLGAGLGGYGAPGVAGLGVPGSPSFLNGSTATSPFAIMPSSPPLA 518
+ P G + G +G GG P P +P ++ S A+ P+ PP
Sbjct: 228 LSGPPMGPKGGGAASSVGGPNGGKQHPP------PTTPISVSSSGASGA---PPTKPPTT 278
Query: 519 AASSMSLPAAAPTTS----VFSFSPVNMISAVKQRSAFAPVLRPPSSPPQ-ACPRAHGEG 573
+LP+A P + + P + + SA P L P P A G+G
Sbjct: 279 PVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNASASPPGLGAQPLPGHLPSPHAMGQG 338
Query: 574 L 574
+
Sbjct: 339 M 339
Score = 34.3 bits (77), Expect = 0.34
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 12/90 (13%)
Query: 394 AADVAEALYSTPRAPGPLAPLAPSHPH--PAVVGINAFSSPLAI--------AVGDATPG 443
AA + + S+ +P P + PS+PH P ++ + P AV P
Sbjct: 384 AASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQGPP 443
Query: 444 PEPGYAR--SCSSASPRGFAPSPGSQQSGY 471
P P Y R + S+A P F PS G+Q + +
Sbjct: 444 PPPPYGRLLANSNAHPGPFPPSTGAQSTAH 473
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 42.4 bits (98), Expect = 0.001
Identities = 50/171 (29%), Positives = 69/171 (40%), Gaps = 26/171 (15%)
Query: 409 GPLAPLAPSHPHPAVVGINAFSSPLAIAVGDAT--------PGPEPGYARSCS-----SA 455
GP P P P V +A S + V + PGP P R+ S +A
Sbjct: 593 GPQGAPYPFPPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPYGKRAPSPGAYKTA 652
Query: 456 SPRGFAPSPGSQQSGYGGGLGAGLGGYGAPGVAGLGVPGSPSFLNGSTATSPFAIMPSSP 515
+P G+ PGS S + G G G P G PGSP+ G + + +PS P
Sbjct: 653 TPPGY--KPGSPPS-FRTGTPPGYRGTSPPAGPGTFKPGSPTVGPGPLPPAGPSGLPSLP 709
Query: 516 PLAAASSMSLPAAAPTTSVFSFSPVNMISAVKQRSAFAPV--LRPPSSPPQ 564
P AA PA+ P S + + A + + +PV R PS PP+
Sbjct: 710 PPPAA-----PASGPPLSA---TQIKQEPAEEYETPESPVPPARSPSPPPK 752
Score = 35.8 bits (81), Expect = 0.12
Identities = 44/181 (24%), Positives = 68/181 (37%), Gaps = 19/181 (10%)
Query: 404 TPRAPG--PLAPLAPSHPHPAVV--GINAFSSPLAIAVGDATPGPEPGYARSCSSASPRG 459
+P+ P P P A PHP+V G +A P + A PG P + + +
Sbjct: 168 SPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPPGAPPPHPQLYPGGTGGV 227
Query: 460 FAPSP-GSQQSGYGGGLGAGLGGYGAPGVAGLGVPGSPSFLNGSTATSPFAIMPSSPPLA 518
+ P G + G +G GG P P +P ++ S A+ P+ PP
Sbjct: 228 LSGPPMGPKGGGAASSVGGPNGGKQHPP------PTTPISVSSSGASGA---PPTKPPTT 278
Query: 519 AASSMSLPAAAPTTS----VFSFSPVNMISAVKQRSAFAPVLRPPSSPPQ-ACPRAHGEG 573
+LP+A P + + P + + SA P L P P A G+G
Sbjct: 279 PVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNASASPPGLGAQPLPGHLPSPHAMGQG 338
Query: 574 L 574
+
Sbjct: 339 M 339
Score = 34.3 bits (77), Expect = 0.34
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 12/90 (13%)
Query: 394 AADVAEALYSTPRAPGPLAPLAPSHPH--PAVVGINAFSSPLAI--------AVGDATPG 443
AA + + S+ +P P + PS+PH P ++ + P AV P
Sbjct: 384 AASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQGPP 443
Query: 444 PEPGYAR--SCSSASPRGFAPSPGSQQSGY 471
P P Y R + S+A P F PS G+Q + +
Sbjct: 444 PPPPYGRLLANSNAHPGPFPPSTGAQSTAH 473
>gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens]
Length = 1711
Score = 42.4 bits (98), Expect = 0.001
Identities = 48/178 (26%), Positives = 70/178 (39%), Gaps = 20/178 (11%)
Query: 403 STPRAPGPLAPLAPSHPHP-AVVGINAFSSPLAIAVGDATPGPEPGYARSCSSASPRGFA 461
S P PLAP+ P P +V + + S+PL+++ P P +SA P G
Sbjct: 244 SVPAPSPPLAPVPALAPAPPSVPTLISDSNPLSVSASVLVPVP--------ASAPPSGPV 295
Query: 462 PSPGSQQSGYGGGLGAGLGGYGAPGVAGLGVP---GSPSFLNGSTATSPFAIMPSSPPLA 518
P + + A P +A + P +P+ + T A MP+S P A
Sbjct: 296 PLSAPAPAPLSVPVSA-------PPLALIQAPVPPSAPTLVLAPVPTPVLAPMPASTPPA 348
Query: 519 AASSMSLPAAAPTTSVFSFSPVNMISAVKQRSAFAPVLRPPSSP-PQACPRAHGEGLP 575
A + S+P PT S S +I A AP P +P P P A +P
Sbjct: 349 APAPPSVPMPTPTPSSGPPSTPTLIPAFAPTPVPAPTPAPIFTPAPTPMPAATPAAIP 406
Score = 38.1 bits (87), Expect = 0.023
Identities = 38/150 (25%), Positives = 57/150 (38%), Gaps = 15/150 (10%)
Query: 398 AEALYSTPRAPGPLAPLAPSHPHPAVVGINAFSSPLAIAVGDATP-------GPEPGYAR 450
A L P + P P+ S P PA + + + PLA+ P P P
Sbjct: 279 ASVLVPVPASAPPSGPVPLSAPAPAPLSVPVSAPPLALIQAPVPPSAPTLVLAPVPTPVL 338
Query: 451 SCSSASPRGFAPSPGSQQSGYGGGLGAGLGGYGAPGVAGLGVPGSPSFLNGSTATSPFAI 510
+ AS AP+P S + G P L +P+ + T F
Sbjct: 339 APMPASTPPAAPAPPSVP------MPTPTPSSGPPSTPTLIPAFAPTPVPAPTPAPIFT- 391
Query: 511 MPSSPPLAAASSMSLPAAAPTTSVFSFSPV 540
P+ P+ AA+ ++P +AP + FS S V
Sbjct: 392 -PAPTPMPAATPAAIPTSAPIPASFSLSRV 420
>gi|54607108 zinc finger, MIZ-type containing 2 isoform 1 [Homo
sapiens]
Length = 920
Score = 42.4 bits (98), Expect = 0.001
Identities = 38/138 (27%), Positives = 49/138 (35%), Gaps = 22/138 (15%)
Query: 407 APGPLAPLAPSHPHPAVVGINAFSSPLAIAVGDATPGPEPGYARSCSSASPRGFAPSPGS 466
AP P P APS +P PL + G +S S P G P
Sbjct: 292 APSPGQPPAPSPSYPG------HRLPL-----------QQGMTQSLSVPGPTGLHYKPTE 334
Query: 467 QQSGYGGGLGAGLGGYGAPGVAG-----LGVPGSPSFLNGSTATSPFAIMPSSPPLAAAS 521
Q +G G G Y PG++G G P SP N + +P + +P P
Sbjct: 335 QFNGQGASFNGGSVSYSQPGLSGPTRSIPGYPSSPLPGNPTPPMTPSSSVPYMSPNQEVK 394
Query: 522 SMSLPAAAPTTSVFSFSP 539
S LP P + SP
Sbjct: 395 SPFLPDLKPNLNSLHSSP 412
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 41.6 bits (96), Expect = 0.002
Identities = 75/275 (27%), Positives = 93/275 (33%), Gaps = 61/275 (22%)
Query: 349 LQKVIPRHPGDPERLPKEVLLKRAADLAEALYGVPGSNQELLLKRAADVAEALYSTPRAP 408
L V+P PG P P G S L L A + + TP P
Sbjct: 1480 LAPVVPAAPGPPSLAPS---------------GASPSASALTLGLATAPSLSSSQTPGHP 1524
Query: 409 GPLAPLAPSHP----------HPAVVGINAFSSPLAIAVGDATPGPEPGYAR------SC 452
LAP + P P +V +A +SP A P P P A S
Sbjct: 1525 LLLAPTSSHVPGLNSTVAPACSPVLVPASALASPFPSA-----PNPAPAQASLLAPASSA 1579
Query: 453 SSASPRGFAPSPGSQQSGYGGGLGAGLGGYGAPGVAGLGV----PGSPSFLNGSTATSPF 508
S A AP Q A L AP +A L V PG+ L S P
Sbjct: 1580 SQALATPLAPMAAPQT--------AILAPSPAPPLAPLPVLAPSPGAAPVLASSQTPVPV 1631
Query: 509 AIMPSSPPLAAASSMSLPAAAPT---TSVFSFSPVNMIS-----AVKQRSAFAPVLRPP- 559
S+P + AS+ +PA P +S + P + S A Q A AP L P
Sbjct: 1632 MAPSSTPGTSLASASPVPAPTPVLAPSSTQTMLPAPVPSPLPSPASTQTLALAPALAPTL 1691
Query: 560 --SSPPQACPRAHGEGLPDQSFEDSDKFHSPARGL 592
SSP Q + G G P F +PA L
Sbjct: 1692 GGSSPSQTL--SLGTGNPQGPFPTQTLSLTPASSL 1724
Score = 38.5 bits (88), Expect = 0.018
Identities = 45/179 (25%), Positives = 70/179 (39%), Gaps = 27/179 (15%)
Query: 410 PLAPLAPSHPHPAVVGINAFSSPLAIAVGDATPGPEPGYARS--------------CSSA 455
P+ PLAP+ P P G+ A +P P P G AR+ S
Sbjct: 1323 PVPPLAPA-PRPPSSGLPAVLNPRPTLTPGRLPTPTLGTARAPMPTPTLVRPLLKLVHSP 1381
Query: 456 SPRGFAPSPGSQQSGYGGGLGAGLGGYGAPGVAGLGVPGSPSFLN--GSTATSPFAI--- 510
SP A +PG+ L G P + + +P S + ST + P +
Sbjct: 1382 SPEVSASAPGAAPLTISSPLHVPSSLPG-PASSPMPIPNSSPLASPVSSTVSVPLSSSLP 1440
Query: 511 --MPSSPPLAAASSMSLPAAAPTTSVFSFSPVNMISAVKQRSAFAPVLRPPSSPPQACP 567
+P++ P A++ +++P +AP T V + P + S APV+ PP P
Sbjct: 1441 ISVPTTLPAPASAPLTIPISAPLT-VSASGPALLTSVTPP---LAPVVPAAPGPPSLAP 1495
Score = 36.6 bits (83), Expect = 0.068
Identities = 42/154 (27%), Positives = 58/154 (37%), Gaps = 32/154 (20%)
Query: 412 APLAPSHPHPAVVGINAFSSPLAIAVGDATPGPEPGYARSCSSASPRGFAPSPGSQQSGY 471
APL S PA+ + + + PLA V A PGP S +P G +PS +
Sbjct: 1461 APLTVSASGPAL--LTSVTPPLAPVV-PAAPGPP--------SLAPSGASPSASALT--- 1506
Query: 472 GGGLGAGLGGYGAPGVAGLGVPGSPSFLNGSTATSPFAIMPSSPPLAAASSMSLPAAAPT 531
LG+ +PS + T P + P+S + +S PA +P
Sbjct: 1507 ------------------LGLATAPSLSSSQTPGHPLLLAPTSSHVPGLNSTVAPACSPV 1548
Query: 532 TSVFSFSPVNMISAVKQRSAFAPVLRPPSSPPQA 565
S SA A A +L P SS QA
Sbjct: 1549 LVPASALASPFPSAPNPAPAQASLLAPASSASQA 1582
Score = 31.6 bits (70), Expect = 2.2
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
Query: 512 PSSPPLAAASSMSLPAAAPTT----SVFSFSPVNMISAVKQRSAFAPVLRPPSSPPQAC- 566
P+S P A + + +P +AP + + PV+++ + S P P +PP AC
Sbjct: 2447 PASAPAAIPALVPVPVSAPVPISAPNPITILPVHILPSPPPPSQIPPCSSPACTPPPACT 2506
Query: 567 -PRAH 570
P AH
Sbjct: 2507 PPPAH 2511
>gi|194363725 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform c [Homo sapiens]
Length = 1152
Score = 41.6 bits (96), Expect = 0.002
Identities = 52/198 (26%), Positives = 75/198 (37%), Gaps = 11/198 (5%)
Query: 346 FQRLQKVIPRHPGDPERLPKEVLLKRAADLAEAL-YGVPGSNQELLLKRAADVAEALYST 404
F+ L+ ++ R E +++L R A E L Y + Q+ + + +
Sbjct: 937 FEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPAL 996
Query: 405 PRAPGPLAPLAPSHPHPAVVGINAFSSPLAIAVGDATPGPEPGYARSCSSASPRGFAPSP 464
P P+ P + P PAV G+ +P ++ A G PG G P
Sbjct: 997 PPGSQPIPPTGAAGP-PAVHGLAV--APASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGP 1053
Query: 465 GSQQSGYGGGLGAGLGGYGAPGVAGLGVPGSPSFLNGSTATS--PFAIMPSSPPLAAASS 522
QQ GA G PGV G G F N T S P A+ S P AA S
Sbjct: 1054 QQQQPA-----GAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAAQS 1108
Query: 523 MSLPAAAPTTSVFSFSPV 540
++ AA + S SP+
Sbjct: 1109 PAIVAAVQGNLLPSASPL 1126
>gi|4758392 forkhead box D1 [Homo sapiens]
Length = 465
Score = 41.2 bits (95), Expect = 0.003
Identities = 50/160 (31%), Positives = 59/160 (36%), Gaps = 25/160 (15%)
Query: 383 PGSNQELLLKRAADVAEALYSTPRAPGPLAPLAPSHPHPAVVGI--NAFS---SPLAIAV 437
P + L AA A A P +P P P PH A + AF PL
Sbjct: 284 PYAPPSALFAAAAAAAAAAAFHPHSPPP-----PPPPHGAAAELARTAFGYRPHPL---- 334
Query: 438 GDATPGPEPGYARSCSSASPRGFAPSPGSQQSGYGGGLGAGLGGYGAPGVAGLGVPGSPS 497
G A PGP P A A SP S +S GG LG P A + +
Sbjct: 335 GAALPGPLPASAAKAGGPGASALARSPFSIESIIGGSLG--------PAAAAAAAAQAAA 386
Query: 498 FLNGSTATSPFAIMP---SSPPLAAASSMSLPAAAPTTSV 534
S + SP A P SS AA + PAAA T S+
Sbjct: 387 AAQASPSPSPVAAPPAPGSSGGGCAAQAAVGPAAALTRSL 426
Score = 31.6 bits (70), Expect = 2.2
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 454 SASPRGFAPSPGSQQSGYGGGLGAGLGGYGAPG 486
S +P G AP+ G+ G GGG GAG GG G
Sbjct: 86 SPAPPGPAPAAGAGAGGGGGGGGAGGGGSAGSG 118
Score = 29.6 bits (65), Expect = 8.3
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Query: 455 ASPRGFAPSPG--SQQSGYGGGLGAGLGGYGAPGVAGLG 491
A P G +P+P + +G G G G G GG G G AG G
Sbjct: 80 APPAGGSPAPPGPAPAAGAGAGGGGGGGGAGGGGSAGSG 118
>gi|13994236 cat eye syndrome chromosome region, candidate 6 isoform
a [Homo sapiens]
Length = 578
Score = 40.8 bits (94), Expect = 0.004
Identities = 30/94 (31%), Positives = 36/94 (38%), Gaps = 7/94 (7%)
Query: 410 PLAPLAPSHPHPAVVGINAFSSPLAIAVGDATPGPEPGYARSCS-------SASPRGFAP 462
PL P A PA VG A +P+A + AT SCS + G
Sbjct: 88 PLVPNAALLGPPAQVGAPAGPAPVAFSSSAATSSSTSTPTSSCSMTAADFGGGAAAGAVG 147
Query: 463 SPGSQQSGYGGGLGAGLGGYGAPGVAGLGVPGSP 496
PGS+ +G GG G G G P G P P
Sbjct: 148 GPGSRSAGGAGGTGTGSGASCCPCCCCCGCPDRP 181
Score = 30.4 bits (67), Expect = 4.8
Identities = 43/186 (23%), Positives = 61/186 (32%), Gaps = 32/186 (17%)
Query: 415 APSHPHPAVVGINAFSSPLAIAVGDATPGPEPGYARSCSSASPRGFAPSPGSQQSGYGGG 474
A HP +F P A A +P + R S RG S S + GGG
Sbjct: 4 ALGHPRSVSSASGSFPPPPAAA------RLQPLFLRGGSFRGRRGSGDSSTSTSTSRGGG 57
Query: 475 LGAGLGGYGAPG--------------------VAGLGVPGSPSFLNGSTATSPFAIMPSS 514
G GG G+P V + G P+ + +P A S+
Sbjct: 58 GGRRGGGGGSPSSSTGAEREDDDESLSVSKPLVPNAALLGPPAQVGAPAGPAPVAFSSSA 117
Query: 515 PPLAAASSMSLPAAAPTTSVFSF---SPVNMISAVKQRSAFAPVLRPPSSPPQACPRAHG 571
A +SS S P ++ + + F + + RSA S CP
Sbjct: 118 ---ATSSSTSTPTSSCSMTAADFGGGAAAGAVGGPGSRSAGGAGGTGTGSGASCCPCCCC 174
Query: 572 EGLPDQ 577
G PD+
Sbjct: 175 CGCPDR 180
>gi|22748877 basic helix-loop-helix domain containing, class B, 5
[Homo sapiens]
Length = 381
Score = 40.8 bits (94), Expect = 0.004
Identities = 44/149 (29%), Positives = 51/149 (34%), Gaps = 28/149 (18%)
Query: 439 DATPGPEPGYARSCSSASPRG------------FAPSPGSQQSGYGGGLGAGLGGYGAPG 486
D + P P + SS+SP G P PG G G G G GG G PG
Sbjct: 43 DLSLAPPPRERPASSSSSPLGCFEPADPEGAGLLLPPPGGGGGGSAGSGGGGGGGVGVPG 102
Query: 487 --VAGLGVPGSPSFLNGSTATSPFAIMPSSPPLAAASSMSLPAAAPTTSVFSFSPVNMIS 544
V GV G PS SS P AA + +A SV S
Sbjct: 103 LLVGSAGVGGDPSL--------------SSLPAGAALCLKYGESASRGSVAESSGGEQSP 148
Query: 545 AVKQRSAFAPVLRPPSSPPQACPRAHGEG 573
VLR + P+A P A G G
Sbjct: 149 DDDSDGRCELVLRAGVADPRASPGAGGGG 177
Score = 32.7 bits (73), Expect = 0.98
Identities = 29/83 (34%), Positives = 34/83 (40%), Gaps = 12/83 (14%)
Query: 433 LAIAVGDATPGPEPGY-------ARSCSSASPRGFAPSPGSQQSGYGGGLGAG--LGGYG 483
L + G A P PG A CS+A G A P G GGG G G G G
Sbjct: 158 LVLRAGVADPRASPGAGGGGAKAAEGCSNAHLHGGASVP---PGGLGGGGGGGSSSGSSG 214
Query: 484 APGVAGLGVPGSPSFLNGSTATS 506
G +G G GS S + S+ S
Sbjct: 215 GGGGSGSGSGGSSSSSSSSSKKS 237
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.135 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,674,707
Number of Sequences: 37866
Number of extensions: 1552951
Number of successful extensions: 11322
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 670
Number of HSP's that attempted gapping in prelim test: 8403
Number of HSP's gapped (non-prelim): 2724
length of query: 598
length of database: 18,247,518
effective HSP length: 108
effective length of query: 490
effective length of database: 14,157,990
effective search space: 6937415100
effective search space used: 6937415100
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.