Guide to the Human Genome
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Name: EBF2 Sequence: fasta or formatted (575aa) NCBI GI: 113930703
Description:

early B-cell factor 2

Referenced in:

B cells
Olfactory Receptors
Helix-Loop-Helix Transcription Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         34           2
 C cysteine            1.7         10           2
 D aspartate           3.7         21           1
 E glutamate           4.2         24           1
 F phenylalanine       4.2         24           2
 G glycine             8.2         47           2
 H histidine           2.1         12           1
 I isoleucine          4.7         27           3
 K lysine              4.3         25           2
 L leucine             7.0         40           2
 M methionine          2.8         16           2
 N asparagine          6.4         37           2
 P proline             7.3         42           2
 Q glutamine           4.5         26           2
 R arginine            5.7         33           2
 S serine             11.1         64           4
 T threonine           5.2         30           2
 V valine              7.7         44           2
 W tryptophan          0.5          3           1
 Y tyrosine            2.8         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   early B-cell factor 2 
EBF3                  0.814   early B-cell factor 3 
EBF1                  0.795   early B-cell factor 
EBF4                  0.706   early B-cell factor 4 
RANBP10               0.015   RAN binding protein 10 
KRT76                 0.014   keratin 76 
MADD                  0.013   MAP-kinase activating death domain-containing prote...
MUC16                 0.013   mucin 16 
CDKL5                 0.013   cyclin-dependent kinase-like 5 
CDKL5                 0.013   cyclin-dependent kinase-like 5 
MADD                  0.013   MAP-kinase activating death domain-containing prote...
MADD                  0.013   MAP-kinase activating death domain-containing prote...
MADD                  0.012   MAP-kinase activating death domain-containing prote...
MADD                  0.012   MAP-kinase activating death domain-containing protei...
MADD                  0.012   MAP-kinase activating death domain-containing prote...
MADD                  0.012   MAP-kinase activating death domain-containing prote...
MADD                  0.012   MAP-kinase activating death domain-containing prote...
MADD                  0.012   MAP-kinase activating death domain-containing prote...
MADD                  0.012   MAP-kinase activating death domain-containing prote...
ADRM1                 0.012   adhesion regulating molecule 1 precursor 
ADRM1                 0.012   adhesion regulating molecule 1 precursor 
GLI2                  0.011   GLI-Kruppel family member GLI2 
MUC3B                 0.011   PREDICTED: mucin 3B, cell surface associated, parti...
POLR2A                0.011   DNA-directed RNA polymerase II A 
CDSN                  0.011   corneodesmosin precursor 
MARK2                 0.011   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.011   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.011   MAP/microtubule affinity-regulating kinase 2 isofor...
PUM2                  0.011   pumilio homolog 2 
TNRC18                0.011   trinucleotide repeat containing 18 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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