Guide to the Human Genome
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Name: CECR6 Sequence: fasta or formatted (578aa) NCBI GI: 13994236
Description:

cat eye syndrome chromosome region, candidate 6 isoform a

Not currently referenced in the text

Other entries for this name:
alt prot {223aa} cat eye syndrome chromosome region, candidate 6 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            14.2         82           7
 C cysteine            3.5         20           5
 D aspartate           2.4         14           3
 E glutamate           2.2         13           1
 F phenylalanine       3.1         18           2
 G glycine            14.7         85           5
 H histidine           2.2         13           4
 I isoleucine          2.1         12           1
 K lysine              0.9          5           1
 L leucine            12.3         71           3
 M methionine          0.9          5           1
 N asparagine          1.6          9           1
 P proline             8.7         50           8
 Q glutamine           2.1         12           2
 R arginine            6.9         40           3
 S serine             10.2         59           3
 T threonine           4.0         23           2
 V valine              4.7         27           4
 W tryptophan          1.4          8           1
 Y tyrosine            2.1         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cat eye syndrome chromosome region, candidate 6 isof... 
CECR6                 0.373   cat eye syndrome chromosome region, candidate 6 iso...
BHLHE22               0.025   basic helix-loop-helix domain containing, class B, 5...
MAF                   0.025   v-maf musculoaponeurotic fibrosarcoma oncogene homol...
MAF                   0.025   v-maf musculoaponeurotic fibrosarcoma oncogene homolo...
DACH1                 0.022   dachshund homolog 1 isoform b 
DACH1                 0.022   dachshund homolog 1 isoform a 
DACH1                 0.022   dachshund homolog 1 isoform c 
SRRM2                 0.022   splicing coactivator subunit SRm300 
CACNG8                0.022   voltage-dependent calcium channel gamma-8 subunit [H...
LOR                   0.021   loricrin 
KCNN2                 0.021   small conductance calcium-activated potassium channe...
HOXD9                 0.020   homeobox D9 
RBM15B                0.020   RNA binding motif protein 15B 
ZIC2                  0.020   zinc finger protein of the cerebellum 2 
SP8                   0.019   Sp8 transcription factor isoform 1 
SP8                   0.019   Sp8 transcription factor isoform 2 
ARID1A                0.019   AT rich interactive domain 1A isoform a 
ARID1A                0.019   AT rich interactive domain 1A isoform b 
KRTAP5-5              0.019   keratin associated protein 5-5 
HRNR                  0.018   hornerin 
SHANK1                0.018   SH3 and multiple ankyrin repeat domains 1 
ANKRD17               0.018   ankyrin repeat domain protein 17 isoform a 
ANKRD17               0.018   ankyrin repeat domain protein 17 isoform b 
KRTAP5-4              0.018   keratin associated protein 5-4 
DMKN                  0.017   dermokine isoform 4 precursor 
DMKN                  0.017   dermokine isoform 5 precursor 
DMKN                  0.017   dermokine isoform 3 precursor 
DMKN                  0.017   dermokine isoform 2 precursor 
NKX2-1                0.017   thyroid transcription factor 1 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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