Guide to the Human Genome
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Search of human proteins with 157743245

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|157743245 WD repeat domain 43 [Homo sapiens]
         (677 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|157743245 WD repeat domain 43 [Homo sapiens]                      1375   0.0  
gi|83779014 katanin p80 subunit B 1 [Homo sapiens]                     66   1e-10
gi|7657439 PCAF associated factor 65 beta isoform a [Homo sapiens]     65   3e-10
gi|23199987 WD repeat domain 5B [Homo sapiens]                         63   1e-09
gi|21361639 DIPB protein [Homo sapiens]                                62   2e-09
gi|155030232 proline, glutamic acid and leucine rich protein 1 [...    59   1e-08
gi|17975763 myelin transcription factor 1 [Homo sapiens]               58   3e-08
gi|109948304 smu-1 suppressor of mec-8 and unc-52 homolog [Homo ...    58   3e-08
gi|239756368 PREDICTED: similar to acidic (leucine-rich) nuclear...    58   3e-08
gi|239750893 PREDICTED: similar to acidic (leucine-rich) nuclear...    58   3e-08
gi|4557741 platelet-activating factor acetylhydrolase, isoform I...    57   4e-08
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom...    57   6e-08
gi|60498973 myelin transcription factor 1-like [Homo sapiens]          57   6e-08
gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32 famil...    57   7e-08
gi|16554629 WD repeat domain 5 [Homo sapiens]                          56   1e-07
gi|16554627 WD repeat domain 5 [Homo sapiens]                          56   1e-07
gi|21735415 centromere protein B [Homo sapiens]                        56   1e-07
gi|115529449 upstream binding transcription factor, RNA polymera...    56   1e-07
gi|115529451 upstream binding transcription factor, RNA polymera...    56   1e-07
gi|7657671 upstream binding transcription factor, RNA polymerase...    56   1e-07
gi|115298668 WD repeat domain 57 (U5 snRNP specific) [Homo sapiens]    55   2e-07
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa...    55   3e-07
gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens]           55   3e-07
gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens]           55   3e-07
gi|169210053 PREDICTED: hypothetical protein [Homo sapiens]            54   4e-07
gi|4759276 RNA, U3 small nucleolar interacting protein 2 [Homo s...    54   5e-07
gi|21071067 TBP-associated factor 5 [Homo sapiens]                     54   5e-07
gi|5803221 WD repeat-containing protein 3 [Homo sapiens]               53   8e-07
gi|55956788 nucleolin [Homo sapiens]                                   53   1e-06
gi|156071450 nardilysin isoform a [Homo sapiens]                       52   1e-06

>gi|157743245 WD repeat domain 43 [Homo sapiens]
          Length = 677

 Score = 1375 bits (3558), Expect = 0.0
 Identities = 677/677 (100%), Positives = 677/677 (100%)

Query: 1   MAAGGGGSCDPLAPAGVPCAFSPHSQAYFALASTDGHLRVWETANNRLHQEYVPSAHLSG 60
           MAAGGGGSCDPLAPAGVPCAFSPHSQAYFALASTDGHLRVWETANNRLHQEYVPSAHLSG
Sbjct: 1   MAAGGGGSCDPLAPAGVPCAFSPHSQAYFALASTDGHLRVWETANNRLHQEYVPSAHLSG 60

Query: 61  TCTCLAWAPARLQAKESPQRKKRKSEAVGMSNQTDLLALGTAVGSILLYSTVKGELHSKL 120
           TCTCLAWAPARLQAKESPQRKKRKSEAVGMSNQTDLLALGTAVGSILLYSTVKGELHSKL
Sbjct: 61  TCTCLAWAPARLQAKESPQRKKRKSEAVGMSNQTDLLALGTAVGSILLYSTVKGELHSKL 120

Query: 121 ISGGHDNRVNCIQWHQDSGCLYSCSDDKHIVEWNVQTCKVKCKWKGDNSSVSSLCISPDG 180
           ISGGHDNRVNCIQWHQDSGCLYSCSDDKHIVEWNVQTCKVKCKWKGDNSSVSSLCISPDG
Sbjct: 121 ISGGHDNRVNCIQWHQDSGCLYSCSDDKHIVEWNVQTCKVKCKWKGDNSSVSSLCISPDG 180

Query: 181 KMLLSAGRTIKLWVLETKEVYRHFTGHATPVSSLMFTTIRPPNESQPFDGITGLYFLSGA 240
           KMLLSAGRTIKLWVLETKEVYRHFTGHATPVSSLMFTTIRPPNESQPFDGITGLYFLSGA
Sbjct: 181 KMLLSAGRTIKLWVLETKEVYRHFTGHATPVSSLMFTTIRPPNESQPFDGITGLYFLSGA 240

Query: 241 VHDRLLNVWQVRSENKEKSAVMSFTVTDEPVYIDLTLSENKEEPVKLAVVCRDGQVHLFE 300
           VHDRLLNVWQVRSENKEKSAVMSFTVTDEPVYIDLTLSENKEEPVKLAVVCRDGQVHLFE
Sbjct: 241 VHDRLLNVWQVRSENKEKSAVMSFTVTDEPVYIDLTLSENKEEPVKLAVVCRDGQVHLFE 300

Query: 301 HILNGYCKKPLTSNCTIQIATPGKGKKSTPKPIPILAAGFCSDKMSLLLVYGSWFQPTIE 360
           HILNGYCKKPLTSNCTIQIATPGKGKKSTPKPIPILAAGFCSDKMSLLLVYGSWFQPTIE
Sbjct: 301 HILNGYCKKPLTSNCTIQIATPGKGKKSTPKPIPILAAGFCSDKMSLLLVYGSWFQPTIE 360

Query: 361 RVALNSREPHMCLVRDISNCWAPKVETAITKVRTPVMNSEAKVLVPGIPGHHAAIKPAPP 420
           RVALNSREPHMCLVRDISNCWAPKVETAITKVRTPVMNSEAKVLVPGIPGHHAAIKPAPP
Sbjct: 361 RVALNSREPHMCLVRDISNCWAPKVETAITKVRTPVMNSEAKVLVPGIPGHHAAIKPAPP 420

Query: 421 QTEQVESKRKSGGNEVSIEERLGAMDIDTHKKGKEDLQTNSFPVLLTQGLESNDFEMLNK 480
           QTEQVESKRKSGGNEVSIEERLGAMDIDTHKKGKEDLQTNSFPVLLTQGLESNDFEMLNK
Sbjct: 421 QTEQVESKRKSGGNEVSIEERLGAMDIDTHKKGKEDLQTNSFPVLLTQGLESNDFEMLNK 480

Query: 481 VLQTRNVNLIKKTVLRMPLHTIIPLLQELTKRLQGHPNSAVLMVQWLKCVLTVHASYLST 540
           VLQTRNVNLIKKTVLRMPLHTIIPLLQELTKRLQGHPNSAVLMVQWLKCVLTVHASYLST
Sbjct: 481 VLQTRNVNLIKKTVLRMPLHTIIPLLQELTKRLQGHPNSAVLMVQWLKCVLTVHASYLST 540

Query: 541 LPDLVPQLGTLYQLMESRVKTFQKLSHLHGKLILLITQVTASEKTKGATSPGQKAKLVYE 600
           LPDLVPQLGTLYQLMESRVKTFQKLSHLHGKLILLITQVTASEKTKGATSPGQKAKLVYE
Sbjct: 541 LPDLVPQLGTLYQLMESRVKTFQKLSHLHGKLILLITQVTASEKTKGATSPGQKAKLVYE 600

Query: 601 EESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDEDAEGKDEENGEDRDTASEK 660
           EESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDEDAEGKDEENGEDRDTASEK
Sbjct: 601 EESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDEDAEGKDEENGEDRDTASEK 660

Query: 661 ELNGDSDLDPENESEEE 677
           ELNGDSDLDPENESEEE
Sbjct: 661 ELNGDSDLDPENESEEE 677


>gi|83779014 katanin p80 subunit B 1 [Homo sapiens]
          Length = 655

 Score = 65.9 bits (159), Expect = 1e-10
 Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 18/168 (10%)

Query: 86  EAVGMSNQTDLLALGTAVGSILLYSTVKGELHSKLISGGHDNRVNCIQWHQDSGCLYSCS 145
           E+V ++   +L+  G+  GSI ++     ++   L+  GH   +  + +H     + S S
Sbjct: 67  ESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLM--GHKANICSLDFHPYGEFVASGS 124

Query: 146 DDKHIVEWNVQTCKVKCKWKGDNSSVSSLCISPDGKMLLSAG--RTIKLWVLETKEVYRH 203
            D +I  W+++      +++G + +V  L  SPDGK L SA    T+KLW L   ++   
Sbjct: 125 QDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSE 184

Query: 204 FTGHATPVSSLMFTTIRPPNESQPFDGITGLYFLSGAVHDRLLNVWQV 251
           F GH  PV+ + F     PNE          Y L+    DR +  W +
Sbjct: 185 FPGHTGPVNVVEF----HPNE----------YLLASGSSDRTIRFWDL 218



 Score = 49.3 bits (116), Expect = 1e-05
 Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 2/95 (2%)

Query: 124 GHDNRVNCIQWHQDSGCLYSCSDDKHIVEWNVQTCKVKCKWKGDNSSVSSLCISPDGKML 183
           GH   V C+++  D   L S +DD  +  W++   K+  ++ G    V+ +   P+  +L
Sbjct: 145 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLL 204

Query: 184 LSAG--RTIKLWVLETKEVYRHFTGHATPVSSLMF 216
            S    RTI+ W LE  +V     G   PV S++F
Sbjct: 205 ASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLF 239



 Score = 41.2 bits (95), Expect = 0.003
 Identities = 41/178 (23%), Positives = 70/178 (39%), Gaps = 28/178 (15%)

Query: 86  EAVGMSNQTDLLALGTAVGSIL----------LYSTVKGELHSKLISGGHDNRVNCIQWH 135
           E V  ++    L LG A G +L          L+S  K      L   GH + V  ++ +
Sbjct: 15  EIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT--GHTSPVESVRLN 72

Query: 136 QDSGCLYSCSDDKHIVEWNVQTCKVKCKWKGDNSSVSSLCISPDGKMLLSAGR--TIKLW 193
                + + S    I  W+++  K+     G  +++ SL   P G+ + S  +   IKLW
Sbjct: 73  TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132

Query: 194 VLETKEVYRHFTGHATPVSSLMFTTIRPPNESQPFDGITGLYFLSGAVHDRLLNVWQV 251
            +  K     + GH+  V  L F+           DG     +L+ A  D  + +W +
Sbjct: 133 DIRRKGCVFRYRGHSQAVRCLRFSP----------DG----KWLASAADDHTVKLWDL 176



 Score = 38.5 bits (88), Expect = 0.021
 Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 2/81 (2%)

Query: 105 SILLYSTVKGELHSKLISGGHDNRVNCIQWHQDSGCLYSCSDDKHIVEWNVQTCKVKCKW 164
           ++ L+    G++ S+    GH   VN +++H +   L S S D+ I  W+++  +V    
Sbjct: 170 TVKLWDLTAGKMMSEF--PGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCI 227

Query: 165 KGDNSSVSSLCISPDGKMLLS 185
           +G+   V S+  +PDG  L S
Sbjct: 228 EGEPGPVRSVLFNPDGCCLYS 248


>gi|7657439 PCAF associated factor 65 beta isoform a [Homo sapiens]
          Length = 589

 Score = 64.7 bits (156), Expect = 3e-10
 Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 16/135 (11%)

Query: 121 ISGGHDNRVNCIQWHQDSGCLYSCSDDKHIVEWNVQTCKVKCKWKGDNSSVSSLCISPDG 180
           I  GH   V+C+++H +S  L + S DK +  W+ Q       + G    V SL  SP+G
Sbjct: 421 IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNG 480

Query: 181 KMLLSAG--RTIKLWVLETKEVYRHFTGHATPVSSLMFTTIRPPNESQPFDGITGLYFLS 238
           K L SAG  + +KLW L +  +Y+   GH   ++SL F+         P  G+     ++
Sbjct: 481 KYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFS---------PDSGL-----IA 526

Query: 239 GAVHDRLLNVWQVRS 253
            A  D  + VW +R+
Sbjct: 527 SASMDNSVRVWDIRN 541



 Score = 43.5 bits (101), Expect = 6e-04
 Identities = 55/207 (26%), Positives = 84/207 (40%), Gaps = 28/207 (13%)

Query: 124 GHDNRVNCIQWHQDSGCLYSCSDDKHIVEWNVQTCKVKCKWKGDNSSVSSLCISPDGKML 183
           GH   V   ++  DS  L SCS+D  I  W++ +      ++G    V  L ISP     
Sbjct: 340 GHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYF 399

Query: 184 LSAG--RTIKLWVLETKEVYRHFTGHATPVSSLMFTTIRPPNESQPFDGITGLYFLSGAV 241
            S    RT +LW  +     R + GH   V  + F     PN +         Y  +G+ 
Sbjct: 400 ASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKF----HPNSN---------YLATGST 446

Query: 242 HDRLLNVWQVRSENKEKSAVMSFTVTDEPVYIDLTLSENKEEPVKLAVVCRDGQVHLFEH 301
            D+ + +W  +  N    +V  FT    PV + L  S N +    LA    D ++ L++ 
Sbjct: 447 -DKTVRLWSAQQGN----SVRLFTGHRGPV-LSLAFSPNGK---YLASAGEDQRLKLWD- 496

Query: 302 ILNGYCKKPL---TSNCTIQIATPGKG 325
           + +G   K L   T N T    +P  G
Sbjct: 497 LASGTLYKELRGHTDNITSLTFSPDSG 523



 Score = 41.2 bits (95), Expect = 0.003
 Identities = 44/208 (21%), Positives = 89/208 (42%), Gaps = 42/208 (20%)

Query: 22  SPHSQAYFALASTDGHLRVWETANNRLHQEYVPSAHLSGTCTCLAWAPARLQAKESPQRK 81
           SP+S  YFA  S D   R+W    +R +   + + HL+    C+ + P            
Sbjct: 393 SPYS-LYFASGSHDRTARLWSF--DRTYPLRIYAGHLADV-DCVKFHP------------ 436

Query: 82  KRKSEAVGMSNQTDLLALGTAVGSILLYSTVKGELHSKLISGGHDNRVNCIQWHQDSGCL 141
                       ++ LA G+   ++ L+S  +G  +S  +  GH   V  + +  +   L
Sbjct: 437 -----------NSNYLATGSTDKTVRLWSAQQG--NSVRLFTGHRGPVLSLAFSPNGKYL 483

Query: 142 YSCSDDKHIVEWNVQTCKVKCKWKGDNSSVSSLCISPDGKMLLSAG--RTIKLWVL---- 195
            S  +D+ +  W++ +  +  + +G   +++SL  SPD  ++ SA    ++++W +    
Sbjct: 484 ASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDIRNTY 543

Query: 196 -------ETKEVYRHFTGHATPVSSLMF 216
                   + E+   +TG  + V S+ F
Sbjct: 544 CSAPADGSSSELVGVYTGQMSNVLSVQF 571



 Score = 32.0 bits (71), Expect = 1.9
 Identities = 36/157 (22%), Positives = 60/157 (38%), Gaps = 32/157 (20%)

Query: 15  AGVPCA-FSPHSQAYFALASTDGHLRVWETANNRLHQEYVPSAHLSGTCTCLAWAPARLQ 73
           A V C  F P+S  Y A  STD  +R+W        + +  + H  G    LA++P    
Sbjct: 427 ADVDCVKFHPNSN-YLATGSTDKTVRLWSAQQGNSVRLF--TGH-RGPVLSLAFSPNGKY 482

Query: 74  AKESPQRKKRKSEAVGMSNQTDLLALGTAVGSILLYSTVKGELHSKLISGGHDNRVNCIQ 133
              + + ++ K                       L+    G L+ +L   GH + +  + 
Sbjct: 483 LASAGEDQRLK-----------------------LWDLASGTLYKEL--RGHTDNITSLT 517

Query: 134 WHQDSGCLYSCSDDKHIVEWNVQTCKVKCKWKGDNSS 170
           +  DSG + S S D  +  W+++     C    D SS
Sbjct: 518 FSPDSGLIASASMDNSVRVWDIR--NTYCSAPADGSS 552


>gi|23199987 WD repeat domain 5B [Homo sapiens]
          Length = 330

 Score = 62.8 bits (151), Expect = 1e-09
 Identities = 45/177 (25%), Positives = 82/177 (46%), Gaps = 18/177 (10%)

Query: 87  AVGMSNQTDLLALGTAVGSILLYSTVKGELHSKLISGGHDNRVNCIQWHQDSGCLYSCSD 146
           +V  S   + LA  +A   I+++    G+    L   GH+  ++ + W  DS  L S SD
Sbjct: 46  SVKFSPNGEWLASSSADRLIIIWGAYDGKYEKTLY--GHNLEISDVAWSSDSSRLVSASD 103

Query: 147 DKHIVEWNVQTCKVKCKWKGDNSSVSSLCISPDGKMLLSAG--RTIKLWVLETKEVYRHF 204
           DK +  W+V++ K     KG ++ V     +P   +++S     T+K+W ++T +  +  
Sbjct: 104 DKTLKLWDVRSGKCLKTLKGHSNYVFCCNFNPPSNLIISGSFDETVKIWEVKTGKCLKTL 163

Query: 205 TGHATPVSSLMFTTIRPPNESQPFDGITGLYFLSGAVHDRLLNVWQVRSENKEKSAV 261
           + H+ PVS++ F               +G   +SG+ +D L  +W   S    K+ V
Sbjct: 164 SAHSDPVSAVHF-------------NCSGSLIVSGS-YDGLCRIWDAASGQCLKTLV 206



 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 16/132 (12%)

Query: 124 GHDNRVNCIQWHQDSGCLYSCSDDKHIVEWNVQTCKVKCKWKGDNSSVSSLCISPDGKML 183
           GH   V+ +++  +   L S S D+ I+ W     K +    G N  +S +  S D   L
Sbjct: 39  GHTEAVSSVKFSPNGEWLASSSADRLIIIWGAYDGKYEKTLYGHNLEISDVAWSSDSSRL 98

Query: 184 LSAG--RTIKLWVLETKEVYRHFTGHATPVSSLMFTTIRPPNESQPFDGITGLYFLSGAV 241
           +SA   +T+KLW + + +  +   GH+  V    F    PP+             +SG+ 
Sbjct: 99  VSASDDKTLKLWDVRSGKCLKTLKGHSNYVFCCNF---NPPSN----------LIISGS- 144

Query: 242 HDRLLNVWQVRS 253
            D  + +W+V++
Sbjct: 145 FDETVKIWEVKT 156



 Score = 36.6 bits (83), Expect = 0.078
 Identities = 48/200 (24%), Positives = 74/200 (37%), Gaps = 27/200 (13%)

Query: 19  CAFSPHSQAYFALASTDGHLRVWETANNRL------HQEYVPSAHL--SGTCT------- 63
           C F+P S    +  S D  +++WE    +       H + V + H   SG+         
Sbjct: 131 CNFNPPSNLIIS-GSFDETVKIWEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDG 189

Query: 64  -CLAWAPARLQA-KESPQRKKRKSEAVGMSNQTDLLALGTAVGSILLYSTVKGELHSKLI 121
            C  W  A  Q  K            V  S     +   T   ++ L+   +G       
Sbjct: 190 LCRIWDAASGQCLKTLVDDDNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYT 249

Query: 122 SGGHDNRVNCI--QWHQDSG-CLYSCSDDKHIVEWNVQTCKVKCKWKGDNSSVSSLCISP 178
             GH N   CI   +    G  + S S+D  +  WN+QT ++  K +G    V S    P
Sbjct: 250 --GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISAACHP 307

Query: 179 DGKMLLSAG----RTIKLWV 194
              ++ SA     +TIKLW+
Sbjct: 308 TENLIASAALENDKTIKLWM 327



 Score = 33.5 bits (75), Expect = 0.66
 Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 16/96 (16%)

Query: 160 VKCKWKGDNSSVSSLCISPDGKMLL--SAGRTIKLWVLETKEVYRHFTGHATPVSSLMFT 217
           +KC   G   +VSS+  SP+G+ L   SA R I +W     +  +   GH   +S + ++
Sbjct: 33  LKCTLVGHTEAVSSVKFSPNGEWLASSSADRLIIIWGAYDGKYEKTLYGHNLEISDVAWS 92

Query: 218 TIRPPNESQPFDGITGLYFLSGAVHDRLLNVWQVRS 253
           +    + S+          L  A  D+ L +W VRS
Sbjct: 93  S----DSSR----------LVSASDDKTLKLWDVRS 114


>gi|21361639 DIPB protein [Homo sapiens]
          Length = 344

 Score = 62.0 bits (149), Expect = 2e-09
 Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 2/78 (2%)

Query: 600 EEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDEDAEGKDEENGEDRDTASE 659
           EE  SEEES+ E   +  E++  EDE + ESE+D + E EDE     +E+N E+ ++ +E
Sbjct: 97  EESESEEESESEEESETEEES--EDESDEESEEDSEEEMEDEQESEAEEDNQEEGESEAE 154

Query: 660 KELNGDSDLDPENESEEE 677
            E   +S+ DPE E E E
Sbjct: 155 GETEAESEFDPEIEMEAE 172



 Score = 52.8 bits (125), Expect = 1e-06
 Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 2/78 (2%)

Query: 600 EEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDEDAEGKDEENGEDRDTASE 659
           EE   + E + EI  +  E++  E EEESESE++ + EEE ED   ++ E   + +   E
Sbjct: 79  EEAEVKVEQEREIESEAGEES--ESEEESESEEESETEEESEDESDEESEEDSEEEMEDE 136

Query: 660 KELNGDSDLDPENESEEE 677
           +E   + D   E ESE E
Sbjct: 137 QESEAEEDNQEEGESEAE 154



 Score = 46.2 bits (108), Expect = 1e-04
 Identities = 26/83 (31%), Positives = 44/83 (53%)

Query: 595 AKLVYEEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDEDAEGKDEENGEDR 654
           A+ V+  ++    +D E A K+  +   E E E ESE  E+ E E+E    ++ E  E+ 
Sbjct: 58  AEYVHGSQAWTPPADGEGAGKEEAEVKVEQEREIESEAGEESESEEESESEEESETEEES 117

Query: 655 DTASEKELNGDSDLDPENESEEE 677
           +  S++E   DS+ + E+E E E
Sbjct: 118 EDESDEESEEDSEEEMEDEQESE 140


>gi|155030232 proline, glutamic acid and leucine rich protein 1
           [Homo sapiens]
          Length = 1130

 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 6/76 (7%)

Query: 600 EEESSEEESDDEIADKDSEDNWDEDEE------ESESEKDEDVEEEDEDAEGKDEENGED 653
           EEE  EEE ++E  +++ E++++E+EE      E E E++E+ EEE E+ EG+ EE  E+
Sbjct: 889 EEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGELEEEEEE 948

Query: 654 RDTASEKELNGDSDLD 669
            D   E+EL    DL+
Sbjct: 949 EDEEEEEELEEVEDLE 964



 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 24/64 (37%), Positives = 40/64 (62%)

Query: 614 DKDSEDNWDEDEEESESEKDEDVEEEDEDAEGKDEENGEDRDTASEKELNGDSDLDPENE 673
           +++ E+  +E+EEE E E++ED EEE+ED E   EE  E+ +   E+    + +L+ E E
Sbjct: 888 EEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGELEEEEE 947

Query: 674 SEEE 677
            E+E
Sbjct: 948 EEDE 951



 Score = 51.2 bits (121), Expect = 3e-06
 Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 3/78 (3%)

Query: 600 EEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDEDAEGKDEENGEDRDTASE 659
           EEE  EEE ++E   ++ E+  +ED EE E +++E  EEE+E+ E  +EE  E+     E
Sbjct: 888 EEEEEEEEEEEE---EEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGELEE 944

Query: 660 KELNGDSDLDPENESEEE 677
           +E   D + + E E  E+
Sbjct: 945 EEEEEDEEEEEELEEVED 962



 Score = 50.4 bits (119), Expect = 5e-06
 Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 4/96 (4%)

Query: 583 EKTKGATSPG--QKAKLVYEEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEED 640
           E T G   P   ++   V    SS+EE ++E  +++ E+  +E+EEE + E++E+ EEE 
Sbjct: 863 EGTPGGGGPPALEEDLTVININSSDEEEEEE--EEEEEEEEEEEEEEEDFEEEEEDEEEY 920

Query: 641 EDAEGKDEENGEDRDTASEKELNGDSDLDPENESEE 676
            + E ++EE  E+     E EL  + + + E E EE
Sbjct: 921 FEEEEEEEEEFEEEFEEEEGELEEEEEEEDEEEEEE 956



 Score = 49.7 bits (117), Expect = 9e-06
 Identities = 24/70 (34%), Positives = 44/70 (62%)

Query: 608 SDDEIADKDSEDNWDEDEEESESEKDEDVEEEDEDAEGKDEENGEDRDTASEKELNGDSD 667
           SD+E  +++ E+  +E+EEE E + +E+ E+E+E  E ++EE  E  +   E+E   + +
Sbjct: 886 SDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGELEEE 945

Query: 668 LDPENESEEE 677
            + E+E EEE
Sbjct: 946 EEEEDEEEEE 955



 Score = 42.0 bits (97), Expect = 0.002
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 12/74 (16%)

Query: 600 EEESSEEESDDEIADKDSEDNWDEDEEESE------------SEKDEDVEEEDEDAEGKD 647
           EEE  EEE D E  ++D E+ ++E+EEE E             E++E+ E+E+E+ E ++
Sbjct: 900 EEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGELEEEEEEEDEEEEEELEE 959

Query: 648 EENGEDRDTASEKE 661
            E+ E      E E
Sbjct: 960 VEDLEFGTAGGEVE 973



 Score = 38.5 bits (88), Expect = 0.021
 Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 1/53 (1%)

Query: 600 EEESSEEESDDEIADKDSE-DNWDEDEEESESEKDEDVEEEDEDAEGKDEENG 651
           EEE  EEE ++E  +++ E +  +E+E+E E E+ E+VE+ +    G + E G
Sbjct: 923 EEEEEEEEFEEEFEEEEGELEEEEEEEDEEEEEELEEVEDLEFGTAGGEVEEG 975


>gi|17975763 myelin transcription factor 1 [Homo sapiens]
          Length = 1121

 Score = 58.2 bits (139), Expect = 3e-08
 Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 8/99 (8%)

Query: 583 EKTKGATSPGQKAKLVYEEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDED 642
           E      S  QK  L +EEE  EEE ++E  ++D E+  +E+EEE E E++E+ EEE+E+
Sbjct: 241 EDAASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEE 300

Query: 643 AEGKDE--------ENGEDRDTASEKELNGDSDLDPENE 673
            E ++E        E+          EL G     P+ E
Sbjct: 301 EEEEEEAAPDVIFQEDTSHTSAQKAPELRGPESPSPKPE 339



 Score = 48.9 bits (115), Expect = 2e-05
 Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 1/108 (0%)

Query: 570 GKLILLITQVTASEKTKGATSPGQKAKLVYEEESSEEESDDEIADKDSEDNWDEDEEESE 629
           G+  L I    A E  +  T   Q       E+++ EES  +      E+  +E+EEE E
Sbjct: 210 GEKGLFIQPEDAEEVVEVTTERSQDLCPQSLEDAASEESSKQKGILSHEEEDEEEEEE-E 268

Query: 630 SEKDEDVEEEDEDAEGKDEENGEDRDTASEKELNGDSDLDPENESEEE 677
            E++ED EEE+E+ E ++EE  E+ +   E+E   + +  P+   +E+
Sbjct: 269 EEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDVIFQED 316



 Score = 47.4 bits (111), Expect = 4e-05
 Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 9/104 (8%)

Query: 583 EKTKGATSPGQKAKLVYEEESSEE------ESDDEIADKDSEDNWDEDEEESE---SEKD 633
           E  +GA S   +  L  + E +EE      E   ++  +  ED   E+  + +   S ++
Sbjct: 200 EAAEGAASEEGEKGLFIQPEDAEEVVEVTTERSQDLCPQSLEDAASEESSKQKGILSHEE 259

Query: 634 EDVEEEDEDAEGKDEENGEDRDTASEKELNGDSDLDPENESEEE 677
           ED EEE+E+ E +++E  E+ +   E+E   + + + E E EEE
Sbjct: 260 EDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 303



 Score = 29.6 bits (65), Expect = 9.5
 Identities = 32/138 (23%), Positives = 47/138 (34%), Gaps = 16/138 (11%)

Query: 538 LSTLPDLVPQLGTLYQLMESRVKTFQKLSHLHGKLILLITQVTASEKTKGATSPGQKAKL 597
           LST P  +P      ++ E+   T     H H K        ++   + G  SP    + 
Sbjct: 647 LSTKPQDLPSKSVDIEVDENG--TLDLSMHKHRKRENAFPSSSSCSSSPGVKSPDASQRH 704

Query: 598 VYEEESSEEESDDEIADKDSEDNWD-------------EDEEESESEKDEDVEEEDEDAE 644
                 S   +  + +    +D WD             E+ EESE         E +D E
Sbjct: 705 SSTSAPSSSMTSPQSSQASRQDEWDRPLDYTKPSRLREEEPEESEPAAHSFASSEADDQE 764

Query: 645 GKDEENGEDRDTASEKEL 662
              EEN E+R    E  L
Sbjct: 765 -VSEENFEERKYPGEVTL 781


>gi|109948304 smu-1 suppressor of mec-8 and unc-52 homolog [Homo
           sapiens]
          Length = 513

 Score = 58.2 bits (139), Expect = 3e-08
 Identities = 46/191 (24%), Positives = 82/191 (42%), Gaps = 23/191 (12%)

Query: 17  VPCA-FSPHSQAYFALASTDGHLRVWETANNRLHQEYVPSAHLSGTCTCLAWAPARLQAK 75
           V CA FSP  Q Y    S DG + VW     ++ ++                   + QA+
Sbjct: 217 VECARFSPDGQ-YLVTGSVDGFIEVWNFTTGKIRKDL------------------KYQAQ 257

Query: 76  ESPQRKKRKSEAVGMSNQTDLLALGTAVGSILLYSTVKGELHSKLISGGHDNRVNCIQWH 135
           ++          +  S  T++LA G   G I ++    G+   +     H   V C+ + 
Sbjct: 258 DNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLRRF-ERAHSKGVTCLSFS 316

Query: 136 QDSGCLYSCSDDKHIVEWNVQTCKVKCKWKGDNSSVSSLCISPDGKMLLSAGR--TIKLW 193
           +DS  + S S D+ I    +++ K   +++G +S V+    + DG  ++SA    T+K+W
Sbjct: 317 KDSSQILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIW 376

Query: 194 VLETKEVYRHF 204
            ++T E    F
Sbjct: 377 NMKTTECSNTF 387



 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 48/213 (22%), Positives = 93/213 (43%), Gaps = 25/213 (11%)

Query: 81  KKRKSEAVGMSNQTDLLALGTAVGSILLYSTVKGELHSKLISGGHDN------RVNCIQW 134
           +K   E    S     L  G+  G I +++   G++   L     DN       V C+ +
Sbjct: 213 QKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCF 272

Query: 135 HQDSGCLYSCSDDKHIVEWNVQTCKVKCKWKGDNSS-VSSLCISPDGKMLLSAG--RTIK 191
            +D+  L + + D  I  W +Q+ +   +++  +S  V+ L  S D   +LSA   +TI+
Sbjct: 273 SRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIR 332

Query: 192 LWVLETKEVYRHFTGHATPVSSLMFTTIRPPNESQPFDGITGLYFLSGAVHDRLLNVWQV 251
           +  L++ +  + F GH++ V+   FT           DG    +++  A  D  + +W +
Sbjct: 333 IHGLKSGKTLKEFRGHSSFVNEATFTQ----------DG----HYIISASSDGTVKIWNM 378

Query: 252 RSENKEKS--AVMSFTVTDEPVYIDLTLSENKE 282
           ++     +  ++ S   TD  V   + L +N E
Sbjct: 379 KTTECSNTFKSLGSTAGTDITVNSVILLPKNPE 411



 Score = 40.0 bits (92), Expect = 0.007
 Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 11/123 (8%)

Query: 118 SKLISGGHDNRVNCIQWHQDSGCLYSCSDDKHIVEWNVQTCKVKCKWK---GDN-----S 169
           S+ I  G  + V C ++  D   L + S D  I  WN  T K++   K    DN      
Sbjct: 206 SRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDD 265

Query: 170 SVSSLCISPDGKMLLSAGR--TIKLWVLETKEVYRHF-TGHATPVSSLMFTTIRPPNESQ 226
           +V  +C S D +ML +  +   IK+W +++ +  R F   H+  V+ L F+       S 
Sbjct: 266 AVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSA 325

Query: 227 PFD 229
            FD
Sbjct: 326 SFD 328


>gi|239756368 PREDICTED: similar to acidic (leucine-rich) nuclear
           phosphoprotein 32 family, member B [Homo sapiens]
          Length = 272

 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 4/82 (4%)

Query: 600 EEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDEDAEGKDEENGEDRDTASE 659
           ++E+ + ++  +  DK+ ED   EDE++ E+E  E+ E ++E+ E +D E  +D+D  SE
Sbjct: 172 DQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVSE 231

Query: 660 KE----LNGDSDLDPENESEEE 677
           +E    L+ D D + E+E EEE
Sbjct: 232 EEEEFGLDKDEDDEDEDEDEEE 253



 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 26/65 (40%), Positives = 40/65 (61%)

Query: 600 EEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDEDAEGKDEENGEDRDTASE 659
           EE   EE+ D+++   D +D   E+EEE   +KDED E+EDED E ++   GE+R   ++
Sbjct: 208 EELDEEEDEDEDVEGDDDKDEVSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETD 267

Query: 660 KELNG 664
            E +G
Sbjct: 268 DEEDG 272



 Score = 48.9 bits (115), Expect = 2e-05
 Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 5/82 (6%)

Query: 600 EEESSEEESDDEIADKDSED---NWDEDEE-ESESEKDEDVEEEDEDAEGKDEENGEDRD 655
           E+E  E+E D E  D + E+     DEDE+ E + +KDE  EEE+E    KDE++ ED D
Sbjct: 190 EDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVSEEEEEFGLDKDEDD-EDED 248

Query: 656 TASEKELNGDSDLDPENESEEE 677
              E+E +G  +       +EE
Sbjct: 249 EDEEEEESGKGENRKRETDDEE 270



 Score = 39.3 bits (90), Expect = 0.012
 Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 8/70 (11%)

Query: 616 DSEDNWDEDEEESESEKD------EDVEEEDE-DAEGKDEENGE-DRDTASEKELNGDSD 667
           D+ D  D++  +S+++ D      ED E EDE D E +D E  E D +   ++++ GD D
Sbjct: 166 DTYDPEDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDD 225

Query: 668 LDPENESEEE 677
            D  +E EEE
Sbjct: 226 KDEVSEEEEE 235


>gi|239750893 PREDICTED: similar to acidic (leucine-rich) nuclear
           phosphoprotein 32 family, member B [Homo sapiens]
          Length = 272

 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 4/82 (4%)

Query: 600 EEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDEDAEGKDEENGEDRDTASE 659
           ++E+ + ++  +  DK+ ED   EDE++ E+E  E+ E ++E+ E +D E  +D+D  SE
Sbjct: 172 DQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVSE 231

Query: 660 KE----LNGDSDLDPENESEEE 677
           +E    L+ D D + E+E EEE
Sbjct: 232 EEEEFGLDKDEDDEDEDEDEEE 253



 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 26/65 (40%), Positives = 40/65 (61%)

Query: 600 EEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDEDAEGKDEENGEDRDTASE 659
           EE   EE+ D+++   D +D   E+EEE   +KDED E+EDED E ++   GE+R   ++
Sbjct: 208 EELDEEEDEDEDVEGDDDKDEVSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETD 267

Query: 660 KELNG 664
            E +G
Sbjct: 268 DEEDG 272



 Score = 48.9 bits (115), Expect = 2e-05
 Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 5/82 (6%)

Query: 600 EEESSEEESDDEIADKDSED---NWDEDEE-ESESEKDEDVEEEDEDAEGKDEENGEDRD 655
           E+E  E+E D E  D + E+     DEDE+ E + +KDE  EEE+E    KDE++ ED D
Sbjct: 190 EDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVSEEEEEFGLDKDEDD-EDED 248

Query: 656 TASEKELNGDSDLDPENESEEE 677
              E+E +G  +       +EE
Sbjct: 249 EDEEEEESGKGENRKRETDDEE 270



 Score = 39.3 bits (90), Expect = 0.012
 Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 8/70 (11%)

Query: 616 DSEDNWDEDEEESESEKD------EDVEEEDE-DAEGKDEENGE-DRDTASEKELNGDSD 667
           D+ D  D++  +S+++ D      ED E EDE D E +D E  E D +   ++++ GD D
Sbjct: 166 DTYDPEDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDD 225

Query: 668 LDPENESEEE 677
            D  +E EEE
Sbjct: 226 KDEVSEEEEE 235


>gi|4557741 platelet-activating factor acetylhydrolase, isoform Ib,
           alpha subunit [Homo sapiens]
          Length = 410

 Score = 57.4 bits (137), Expect = 4e-08
 Identities = 63/233 (27%), Positives = 98/233 (42%), Gaps = 31/233 (13%)

Query: 119 KLISGGHDNRVNCIQWHQDSGCLYSCSDDKHIVEWNVQTCKVKCKWKGDNSSVSSLCISP 178
           K    GH + V  + +H     + S S+D  I  W+ +T   +   KG   SV  +    
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160

Query: 179 DGKML--LSAGRTIKLWVLETKEVYRHFTGHATPVSSLMFTTIRPPNESQPFDGITGLYF 236
            GK+L   SA  TIKLW  +  E  R   GH   VSS+    I P  +            
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSV---AIMPNGD-----------H 206

Query: 237 LSGAVHDRLLNVWQVRSENKEKSAVMSFTVTDEPVYI-------DLTLSENKEEPVKLAV 289
           +  A  D+ + +W+V++       V +FT   E V +        L  S + ++ V++ V
Sbjct: 207 IVSASRDKTIKMWEVQT----GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262

Query: 290 VCR---DGQVHLFEHILNGYCKKPLTSNCTIQIATPGKGKKSTPKPIPILAAG 339
           V       ++   EH++      P +S  +I  AT  + KKS  KP P L +G
Sbjct: 263 VATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKS-GKPGPFLLSG 314



 Score = 47.8 bits (112), Expect = 3e-05
 Identities = 40/166 (24%), Positives = 66/166 (39%), Gaps = 10/166 (6%)

Query: 30  ALASTDGHLRVWETANNRLHQEYVPSAHLSGTCTCLAWAPARLQAKESPQRKKRKSEAVG 89
           A  S D  +RVW  A      E     H+     C++WAP   ++  S   +   SE   
Sbjct: 250 ASCSNDQTVRVWVVATKECKAELREHEHV---VECISWAP---ESSYSSISEATGSETKK 303

Query: 90  MSNQTDLLALGTAVGSILLYSTVKGELHSKLISGGHDNRVNCIQWHQDSGCLYSCSDDKH 149
                  L  G+   +I ++    G     L+  GHDN V  + +H     + SC+DDK 
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV--GHDNWVRGVLFHSGGKFILSCADDKT 361

Query: 150 IVEWNVQTCKVKCKWKGDNSSVSSLCISPDGKMLL--SAGRTIKLW 193
           +  W+ +  +           V+SL        ++  S  +T+K+W
Sbjct: 362 LRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407



 Score = 40.8 bits (94), Expect = 0.004
 Identities = 37/150 (24%), Positives = 58/150 (38%), Gaps = 36/150 (24%)

Query: 125 HDNRVNCIQWHQDSGC--------------------LYSCSDDKHIVEWNVQTCKVKCKW 164
           H++ V CI W  +S                      L S S DK I  W+V T       
Sbjct: 275 HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL 334

Query: 165 KGDNSSVSSLCISPDGKMLLSAG--RTIKLWVLETKEVYRHFTGHATPVSSLMFTTIRPP 222
            G ++ V  +     GK +LS    +T+++W  + K   +    H   V+SL F    P 
Sbjct: 335 VGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAP- 393

Query: 223 NESQPFDGITGLYFLSGAVHDRLLNVWQVR 252
                       Y ++G+V D+ + VW+ R
Sbjct: 394 ------------YVVTGSV-DQTVKVWECR 410


>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
            sapiens]
          Length = 1152

 Score = 57.0 bits (136), Expect = 6e-08
 Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 6/92 (6%)

Query: 592  GQKAKLVYEEESSEEESDD-EIADKDSEDNWDEDEEESESEKDEDVEEEDEDAEGKDEE- 649
            G++ +   EEE  E E +D E   ++ E  W+ +EEE E E +E+ E E E+ EG+ EE 
Sbjct: 925  GEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEGEGEGEEE 984

Query: 650  ----NGEDRDTASEKELNGDSDLDPENESEEE 677
                 GE+ +   E E  G+ + + E E EEE
Sbjct: 985  EGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEE 1016



 Score = 56.6 bits (135), Expect = 7e-08
 Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 1/92 (1%)

Query: 586 KGATSPGQKAKLVYEEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDEDAEG 645
           +G    G++     E E  EEE + E  +++ E   +E+E E E E++ + E E+E+ EG
Sbjct: 861 EGEEGEGEEEGEEGEGEGEEEEGEGE-GEEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEG 919

Query: 646 KDEENGEDRDTASEKELNGDSDLDPENESEEE 677
           K EE GE+ +   E+E       D E E EEE
Sbjct: 920 KGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEE 951



 Score = 53.1 bits (126), Expect = 8e-07
 Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)

Query: 600  EEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDEDAEGKDEENGEDRDTASE 659
            EEE  EEE ++E   +  E+   E EEE E E + +VE E+ + EG++EE GE+     E
Sbjct: 991  EEEEGEEEGEEE--GEGEEEGEGEGEEEEEGEVEGEVEGEEGEGEGEEEE-GEEEGEERE 1047

Query: 660  KELNGDSDLDPENESEEE 677
            KE  G+ +     E EEE
Sbjct: 1048 KEGEGEENRRNREEEEEE 1065



 Score = 51.2 bits (121), Expect = 3e-06
 Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 11/89 (12%)

Query: 600  EEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVE-----------EEDEDAEGKDE 648
            EEE   E  D E   ++ E  W+ +EEE E E +E+ E           EE+ + EG++E
Sbjct: 934  EEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEGEGEGEEEEGEGEGEEE 993

Query: 649  ENGEDRDTASEKELNGDSDLDPENESEEE 677
            E  E+ +   E E  G+ + + E E E E
Sbjct: 994  EGEEEGEEEGEGEEEGEGEGEEEEEGEVE 1022



 Score = 50.4 bits (119), Expect = 5e-06
 Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 3/79 (3%)

Query: 600 EEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDEDAEGKDEENGEDRDTASE 659
           EEE  E E ++E   ++ E   +E+E E E E++ + E E+E+ EG+ EE GE      E
Sbjct: 859 EEEGEEGEGEEE--GEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEE 916

Query: 660 KELNGDSD-LDPENESEEE 677
            E  G+ +  + E E EEE
Sbjct: 917 GEGKGEEEGEEGEGEGEEE 935



 Score = 50.1 bits (118), Expect = 7e-06
 Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 5/102 (4%)

Query: 577 TQVTASEKTKGATSPGQKAKLVYEEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDV 636
           T+    EK +G    G +   V E +   EE ++E   ++ E   +E+E E E E+ E  
Sbjct: 801 TEGRGEEKEEGGEVEGGE---VEEGKGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGK 857

Query: 637 -EEEDEDAEGKDEENGEDRDTASEKELNGDSDLDPENESEEE 677
            EEE E+ EG +EE  E      E+E  G+ + + E E EEE
Sbjct: 858 GEEEGEEGEG-EEEGEEGEGEGEEEEGEGEGEEEGEGEGEEE 898



 Score = 49.3 bits (116), Expect = 1e-05
 Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 8/93 (8%)

Query: 592 GQKAKLVYEEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEE--------EDEDA 643
           G++ +   E E  EEE + E  + + E+   E + E E E+ E  EE        E+E+ 
Sbjct: 824 GEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEG 883

Query: 644 EGKDEENGEDRDTASEKELNGDSDLDPENESEE 676
           EG+ EE GE      E E  G+ + + E E EE
Sbjct: 884 EGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEE 916



 Score = 46.6 bits (109), Expect = 8e-05
 Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 4/78 (5%)

Query: 600  EEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDEDAEGKDEENGEDRDTASE 659
            E E   EE + E  +++ E   +E+E E E E++ + EEE E  EG++EE GE       
Sbjct: 969  EGEGEGEEGEGEGEEEEGEGEGEEEEGEEEGEEEGEGEEEGE-GEGEEEEEGEVEGEVEG 1027

Query: 660  KELNGDSDLDPENESEEE 677
            +E  G+ +   E E EEE
Sbjct: 1028 EEGEGEGE---EEEGEEE 1042



 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 13/108 (12%)

Query: 583 EKTKGATS---PGQKAKLVYEEESSEEESDDEIADKDSEDNWDED----------EEESE 629
           EK KG      PG+  K + E+E  ++   +E   K+ E    ++          EE  E
Sbjct: 678 EKDKGRGEMERPGEGEKELAEKEEWKKRDGEEQEQKEREQGHQKERNQEMEEGGEEEHGE 737

Query: 630 SEKDEDVEEEDEDAEGKDEENGEDRDTASEKELNGDSDLDPENESEEE 677
            E++E   EE+E+ EG+ +E GE  +   E+E         E   +EE
Sbjct: 738 GEEEEGDREEEEEKEGEGKEEGEGEEVEGEREKEEGERKKEERAGKEE 785



 Score = 44.7 bits (104), Expect = 3e-04
 Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 3/98 (3%)

Query: 583 EKTKGATSPGQKAKLVYEEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDED 642
           E  +G    G + +   +E   +EE + E  + + E    E ++E  + K+E  EEE + 
Sbjct: 734 EHGEGEEEEGDREEEEEKEGEGKEEGEGEEVEGEREKEEGERKKEERAGKEEKGEEEGDQ 793

Query: 643 AEGKDEE---NGEDRDTASEKELNGDSDLDPENESEEE 677
            EG++EE    GE+++   E E     +   E E EEE
Sbjct: 794 GEGEEEETEGRGEEKEEGGEVEGGEVEEGKGEREEEEE 831



 Score = 44.7 bits (104), Expect = 3e-04
 Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 1/77 (1%)

Query: 600  EEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDEDAEGKDEENGEDRDTASE 659
            EEE   E  ++E  + + E   +E E E E E+ E+ E E+ + EG+ EEN  +R+   E
Sbjct: 1006 EEEGEGEGEEEEEGEVEGEVEGEEGEGEGEEEEGEE-EGEEREKEGEGEENRRNREEEEE 1064

Query: 660  KELNGDSDLDPENESEE 676
            +E       + ENE ++
Sbjct: 1065 EEGKYQETGEEENERQD 1081



 Score = 44.3 bits (103), Expect = 4e-04
 Identities = 21/62 (33%), Positives = 36/62 (58%)

Query: 600  EEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDEDAEGKDEENGEDRDTASE 659
            E E   EE + E  +++ E+  +E E+E E E++    EE+E+ EGK +E GE+ +   +
Sbjct: 1022 EGEVEGEEGEGEGEEEEGEEEGEEREKEGEGEENRRNREEEEEEEGKYQETGEEENERQD 1081

Query: 660  KE 661
             E
Sbjct: 1082 GE 1083



 Score = 43.9 bits (102), Expect = 5e-04
 Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 10/101 (9%)

Query: 583 EKTKGATSPGQKAKLVYEEESSEEESDD-EIADKDSEDNWDEDEEESESEKDE------D 635
           EK +G     ++A    +EE  EEE D  E  ++++E   +E EE  E E  E      +
Sbjct: 769 EKEEGERKKEERAG---KEEKGEEEGDQGEGEEEETEGRGEEKEEGGEVEGGEVEEGKGE 825

Query: 636 VEEEDEDAEGKDEENGEDRDTASEKELNGDSDLDPENESEE 676
            EEE+E+ EG++EE   + +    +E  G+   + E E  E
Sbjct: 826 REEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGE 866



 Score = 43.9 bits (102), Expect = 5e-04
 Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 2/78 (2%)

Query: 600 EEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDEDAEGKDEENGEDRDTASE 659
           E E  EEE + +  ++  E   + +EEE E E  ED E E E+ EG+ E   E+ +   E
Sbjct: 909 EGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGE-GEDGEGEGEEEEGEWEGEEEEGEGEGE 967

Query: 660 KELNGDSDLDPENESEEE 677
           +E  G+ + + E E EEE
Sbjct: 968 EEGEGEGE-EGEGEGEEE 984



 Score = 43.9 bits (102), Expect = 5e-04
 Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 8/81 (9%)

Query: 600  EEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEE---EDEDAEGKDEENGEDRDT 656
            EEE  E E ++E  + + E+  + + EE E E +E+  E   E+E+ E + EE GE    
Sbjct: 949  EEEEGEWEGEEEEGEGEGEEEGEGEGEEGEGEGEEEEGEGEGEEEEGEEEGEEEGE---- 1004

Query: 657  ASEKELNGDSDLDPENESEEE 677
              E+E  G+ + + E E E E
Sbjct: 1005 -GEEEGEGEGEEEEEGEVEGE 1024



 Score = 43.5 bits (101), Expect = 6e-04
 Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 15/100 (15%)

Query: 592 GQKAKLVYEEESSEEESDDE-IADKDSEDNWDEDEEESESEKDEDV-----EEEDEDAEG 645
           G++ +   EEE  E E ++E   + + E+   E EEE E E +E+      EEE E+ EG
Sbjct: 871 GEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEG 930

Query: 646 KDE--------ENGEDRDTASEKELNGDSDLDPENESEEE 677
           + E        E+GE      E E  G+ + + E E EEE
Sbjct: 931 EGEEEEGEGEGEDGEGEGEEEEGEWEGEEE-EGEGEGEEE 969



 Score = 42.7 bits (99), Expect = 0.001
 Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 1/91 (1%)

Query: 586  KGATSPGQKAKLVYEEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDEDAEG 645
            +G    G+  +   E E  EEE + E  +++ E   +E E E E E+ E   EE+E  E 
Sbjct: 940  EGEDGEGEGEEEEGEWEGEEEEGEGE-GEEEGEGEGEEGEGEGEEEEGEGEGEEEEGEEE 998

Query: 646  KDEENGEDRDTASEKELNGDSDLDPENESEE 676
             +EE   + +   E E   + +++ E E EE
Sbjct: 999  GEEEGEGEEEGEGEGEEEEEGEVEGEVEGEE 1029



 Score = 42.4 bits (98), Expect = 0.001
 Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 10/101 (9%)

Query: 583 EKTKGATSPGQKAKLVYEEESSEEESDDEIADKDSEDNW---DEDEEESESEKDEDVEEE 639
           EK +     G+  +   E    E+E   E+   + E+     +E+EEE E E++E  E E
Sbjct: 785 EKGEEEGDQGEGEEEETEGRGEEKEEGGEVEGGEVEEGKGEREEEEEEGEGEEEEG-EGE 843

Query: 640 DEDAEGKDEE---NGEDRDTASEKELNGDSDLDPENESEEE 677
           +E+ EG++EE    GE+     E E  G+   + E E EEE
Sbjct: 844 EEEGEGEEEEGEGKGEEEGEEGEGEEEGE---EGEGEGEEE 881



 Score = 42.4 bits (98), Expect = 0.001
 Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 4/81 (4%)

Query: 600 EEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDEDAEGKD-EENGEDRD--- 655
           EEE  E E ++E   +  E+  +   EE   E + + EEE+ + EG+D E  GE+ +   
Sbjct: 896 EEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEW 955

Query: 656 TASEKELNGDSDLDPENESEE 676
              E+E  G+ + + E E EE
Sbjct: 956 EGEEEEGEGEGEEEGEGEGEE 976



 Score = 42.4 bits (98), Expect = 0.001
 Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 4/78 (5%)

Query: 601  EESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDEDAEGKDEENGEDRDTASEK 660
            E   EEE + E  + + E   +E E E E E+ E  EE +E+ EG++E  GE  +   E 
Sbjct: 963  EGEGEEEGEGEGEEGEGEGEEEEGEGEGEEEEGE--EEGEEEGEGEEEGEGEGEE-EEEG 1019

Query: 661  ELNGDSD-LDPENESEEE 677
            E+ G+ +  + E E EEE
Sbjct: 1020 EVEGEVEGEEGEGEGEEE 1037



 Score = 40.4 bits (93), Expect = 0.005
 Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 18/106 (16%)

Query: 583 EKTKGATSPGQKAKLVYEEESSEEESDDEIADKDSEDNWD-EDEEESESEKDEDVEEEDE 641
           E+ KG    G+       E     E + E+A+K+     D E++E+ E E+    E   E
Sbjct: 673 EREKGEKDKGRG------EMERPGEGEKELAEKEEWKKRDGEEQEQKEREQGHQKERNQE 726

Query: 642 DAEGKDEENGE------DRDTASEKELNG-----DSDLDPENESEE 676
             EG +EE+GE      DR+   EKE  G       +++ E E EE
Sbjct: 727 MEEGGEEEHGEGEEEEGDREEEEEKEGEGKEEGEGEEVEGEREKEE 772



 Score = 40.4 bits (93), Expect = 0.005
 Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 1/69 (1%)

Query: 600  EEESSEEESDDEIADKDSEDNWDEDEEESES-EKDEDVEEEDEDAEGKDEENGEDRDTAS 658
            EEE  E E + E  + + E   +E EEE E  EK+ + EE   + E ++EE G+ ++T  
Sbjct: 1015 EEEEGEVEGEVEGEEGEGEGEEEEGEEEGEEREKEGEGEENRRNREEEEEEEGKYQETGE 1074

Query: 659  EKELNGDSD 667
            E+    D +
Sbjct: 1075 EENERQDGE 1083



 Score = 38.5 bits (88), Expect = 0.021
 Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 4/89 (4%)

Query: 593 QKAKLVYEEESSEEE---SDDEIADKDSEDNWD-EDEEESESEKDEDVEEEDEDAEGKDE 648
           QK +    EE  EEE    ++E  D++ E+  + E +EE E E+ E   E++E    K+E
Sbjct: 720 QKERNQEMEEGGEEEHGEGEEEEGDREEEEEKEGEGKEEGEGEEVEGEREKEEGERKKEE 779

Query: 649 ENGEDRDTASEKELNGDSDLDPENESEEE 677
             G++     E +     + + E   EE+
Sbjct: 780 RAGKEEKGEEEGDQGEGEEEETEGRGEEK 808



 Score = 37.7 bits (86), Expect = 0.035
 Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 8/96 (8%)

Query: 583 EKTKGATSPGQKAKLVYEEESSE-EESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDE 641
           EK       G+  ++  E E  E E   +E A K+ +   + D+ E E E+ E   EE E
Sbjct: 750 EKEGEGKEEGEGEEVEGEREKEEGERKKEERAGKEEKGEEEGDQGEGEEEETEGRGEEKE 809

Query: 642 DAEGKDEENGEDRDTASEKELNGDSDLDPENESEEE 677
             EG + E GE  +   E+E     + + E E EEE
Sbjct: 810 --EGGEVEGGEVEEGKGERE-----EEEEEGEGEEE 838



 Score = 37.7 bits (86), Expect = 0.035
 Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 5/88 (5%)

Query: 592 GQKAKLVYEEESSEEESDDEIA-DKDSEDNWDEDE-EESESEKDEDVEEEDEDAEGKDEE 649
           G++ +   E+E  E + ++    ++  E+  D+ E EE E+E   + +EE  + EG + E
Sbjct: 761 GEEVEGEREKEEGERKKEERAGKEEKGEEEGDQGEGEEEETEGRGEEKEEGGEVEGGEVE 820

Query: 650 NGEDRDTASEKELNGDSDLDPENESEEE 677
            G+      E+E  G+ +   E E EEE
Sbjct: 821 EGKGEREEEEEEGEGEEE---EGEGEEE 845



 Score = 36.6 bits (83), Expect = 0.078
 Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 27/128 (21%)

Query: 577 TQVTASEKTKGATSPGQKAKLVYEEESSEEESDDEIADKDSE--DNW-DEDEEESE---- 629
           T++ + + T  A     KAK V E E   E   D   ++ S   ++W DE+ E+ E    
Sbjct: 623 TEILSDDLTDKAEVSEGKAKSVGEAEDGPEGRGDGTCEEGSSGAEHWQDEEREKGEKDKG 682

Query: 630 --------------SEKDEDVEEEDEDAEGKDEENGEDRDTASEKELNGDSDL------D 669
                         +EK+E  + + E+ E K+ E G  ++   E E  G+ +       +
Sbjct: 683 RGEMERPGEGEKELAEKEEWKKRDGEEQEQKEREQGHQKERNQEMEEGGEEEHGEGEEEE 742

Query: 670 PENESEEE 677
            + E EEE
Sbjct: 743 GDREEEEE 750



 Score = 32.0 bits (71), Expect = 1.9
 Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 3/64 (4%)

Query: 584  KTKGATSPGQKAKLVYEEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDEDA 643
            + +G    G+  +   EEE  E E + E   +++  N +E+EEE E +  E  EEE+E  
Sbjct: 1024 EVEGEEGEGEGEEEEGEEEGEEREKEGE--GEENRRNREEEEEE-EGKYQETGEEENERQ 1080

Query: 644  EGKD 647
            +G++
Sbjct: 1081 DGEE 1084


>gi|60498973 myelin transcription factor 1-like [Homo sapiens]
          Length = 1184

 Score = 57.0 bits (136), Expect = 6e-08
 Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 5/77 (6%)

Query: 601 EESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDEDAEGKDEENGED-RDTASE 659
           +E  E+E ++   D D   + DE++EE + E++E++EEEDED    D+E+GED  D   E
Sbjct: 100 DEKEEDEGEEYSEDNDEPGDEDEEDEEGDREEEEEIEEEDED----DDEDGEDVEDEEEE 155

Query: 660 KELNGDSDLDPENESEE 676
           +E   + + + ENE  +
Sbjct: 156 EEEEEEEEEEEENEDHQ 172



 Score = 54.7 bits (130), Expect = 3e-07
 Identities = 29/95 (30%), Positives = 49/95 (51%)

Query: 583 EKTKGATSPGQKAKLVYEEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDED 642
           +K     +P +K   V  + SS +E DD    +D ++  +++ EE   + DE  +E++ED
Sbjct: 65  DKQPQEPAPKRKPFAVKADSSSVDECDDSDGTEDMDEKEEDEGEEYSEDNDEPGDEDEED 124

Query: 643 AEGKDEENGEDRDTASEKELNGDSDLDPENESEEE 677
            EG  EE  E  +   + + +G+   D E E EEE
Sbjct: 125 EEGDREEEEEIEEEDEDDDEDGEDVEDEEEEEEEE 159



 Score = 53.9 bits (128), Expect = 5e-07
 Identities = 31/76 (40%), Positives = 45/76 (59%), Gaps = 4/76 (5%)

Query: 600 EEESSEE--ESDDEIADKDSED-NWDEDEEESESEKDEDVEEEDEDAEGKDEENGEDRDT 656
           EE+  EE  E +DE  D+D ED   D +EEE   E+DED +E+ ED E ++EE  E+ + 
Sbjct: 103 EEDEGEEYSEDNDEPGDEDEEDEEGDREEEEEIEEEDEDDDEDGEDVEDEEEEEEEEEEE 162

Query: 657 ASEKELNGDSDLDPEN 672
             E+E N D  ++  N
Sbjct: 163 EEEEE-NEDHQMNCHN 177



 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 4/79 (5%)

Query: 601 EESSEEESDDEIADKDSEDNWDE----DEEESESEKDEDVEEEDEDAEGKDEENGEDRDT 656
           +E  +E+ +DE  D++ E+  +E    D+E+ E  +DE+ EEE+E+ E ++EEN + +  
Sbjct: 115 DEPGDEDEEDEEGDREEEEEIEEEDEDDDEDGEDVEDEEEEEEEEEEEEEEEENEDHQMN 174

Query: 657 ASEKELNGDSDLDPENESE 675
                +  D++ D  N  E
Sbjct: 175 CHNTRIMQDTEKDDNNNDE 193



 Score = 48.1 bits (113), Expect = 3e-05
 Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 3/73 (4%)

Query: 601 EESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDEDAEGKDEENGEDRDTASEK 660
           EE  E E +DE  D+D ED  DE+EEE E E++E+ EEE+ED +         +DT  EK
Sbjct: 130 EEEEEIEEEDEDDDEDGEDVEDEEEEE-EEEEEEEEEEENEDHQMNCHNTRIMQDT--EK 186

Query: 661 ELNGDSDLDPENE 673
           + N + + D  +E
Sbjct: 187 DDNNNDEYDNYDE 199



 Score = 39.3 bits (90), Expect = 0.012
 Identities = 18/66 (27%), Positives = 37/66 (56%), Gaps = 5/66 (7%)

Query: 598 VYEEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEED----EDAEGKDEENGED 653
           + EE+  ++E  +++ D++ E+  +E+EEE E  +D  +   +    +D E KD+ N ++
Sbjct: 135 IEEEDEDDDEDGEDVEDEEEEEEEEEEEEEEEENEDHQMNCHNTRIMQDTE-KDDNNNDE 193

Query: 654 RDTASE 659
            D   E
Sbjct: 194 YDNYDE 199



 Score = 33.5 bits (75), Expect = 0.66
 Identities = 24/104 (23%), Positives = 50/104 (48%), Gaps = 11/104 (10%)

Query: 583 EKTKGATSPGQKAKLVYEEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDED 642
           E+ +     G+  +   EEE  EEE ++E  ++D + N        ++EKD++  +E ++
Sbjct: 137 EEDEDDDEDGEDVEDEEEEEEEEEEEEEEEENEDHQMNCHNTRIMQDTEKDDNNNDEYDN 196

Query: 643 AE----------GKDEENGEDRDTASEKELNGDSDLDPENESEE 676
            +          GK  E+   R   +E E+N ++    E++S++
Sbjct: 197 YDELVAKSLLNLGKIAEDAAYR-ARTESEMNSNTSNSLEDDSDK 239


>gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32 family,
           member B [Homo sapiens]
          Length = 251

 Score = 56.6 bits (135), Expect = 7e-08
 Identities = 34/82 (41%), Positives = 44/82 (53%), Gaps = 5/82 (6%)

Query: 599 YEEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEED---EDAEGKDEENGEDRD 655
           Y+ E  E    D   D   E+  DE+ E+ E E DED EEE+   ED E +D E  ED D
Sbjct: 148 YDREDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDD 207

Query: 656 TASEKELNGDSDLDPENESEEE 677
             SE+E   +  LD E+E E+E
Sbjct: 208 EVSEEE--EEFGLDEEDEDEDE 227



 Score = 56.6 bits (135), Expect = 7e-08
 Identities = 27/78 (34%), Positives = 47/78 (60%)

Query: 600 EEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDEDAEGKDEENGEDRDTASE 659
           ++E+ + +++ +  D++ ED   EDEE+ + E  E+ E ++ED E +D E  ED D  SE
Sbjct: 152 DQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVSE 211

Query: 660 KELNGDSDLDPENESEEE 677
           +E     D + E+E E+E
Sbjct: 212 EEEEFGLDEEDEDEDEDE 229



 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 27/81 (33%), Positives = 48/81 (59%), Gaps = 4/81 (4%)

Query: 600 EEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDEDAEGKDEENGEDRDTASE 659
           EE   EE+ DDE  +++  D  D+++E+ E ++D+D   E+E+  G DEE+ ED D   E
Sbjct: 172 EEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEEEEEFGLDEED-EDEDEDEE 230

Query: 660 KELNGDSD---LDPENESEEE 677
           +E  G  +    + ++E E++
Sbjct: 231 EEEGGKGEKRKRETDDEGEDD 251



 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 8/73 (10%)

Query: 605 EEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDEDAEGKDEENGEDRDTASEKELNG 664
           EEE D+E  D++ ED  DED EE E ++++D   EDED EG ++   +D  +  E+E   
Sbjct: 167 EEEEDEEGEDEEDED--DEDGEEEEFDEEDD---EDEDVEGDED---DDEVSEEEEEFGL 218

Query: 665 DSDLDPENESEEE 677
           D + + E+E EEE
Sbjct: 219 DEEDEDEDEDEEE 231



 Score = 49.7 bits (117), Expect = 9e-06
 Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 13/79 (16%)

Query: 600 EEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVE--EEDEDAEGKDEENGEDRDTA 657
           +EE  +EE +DE  D+D ED  +E+E + E ++DEDVE  E+D++   ++EE G D +  
Sbjct: 166 DEEEEDEEGEDE-EDEDDEDG-EEEEFDEEDDEDEDVEGDEDDDEVSEEEEEFGLDEE-- 221

Query: 658 SEKELNGDSDLDPENESEE 676
                  D D D + E EE
Sbjct: 222 -------DEDEDEDEEEEE 233



 Score = 44.7 bits (104), Expect = 3e-04
 Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 2/63 (3%)

Query: 616 DSEDNWDEDEEESESEKDEDVEEEDEDAEGKDEENGEDRDTASEK-ELNGDSDLDPENES 674
           D  D  D++  +S++E D  V+EE+ED EG+DEE+ +D D   E+ +   D D D E + 
Sbjct: 146 DGYDREDQEAPDSDAEVD-GVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDE 204

Query: 675 EEE 677
           +++
Sbjct: 205 DDD 207


>gi|16554629 WD repeat domain 5 [Homo sapiens]
          Length = 334

 Score = 56.2 bits (134), Expect = 1e-07
 Identities = 36/151 (23%), Positives = 70/151 (46%), Gaps = 4/151 (2%)

Query: 87  AVGMSNQTDLLALGTAVGSILLYSTVKGELHSKLISGGHDNRVNCIQWHQDSGCLYSCSD 146
           +V  S   + LA  +A   I ++    G+    +   GH   ++ + W  DS  L S SD
Sbjct: 50  SVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI--SGHKLGISDVAWSSDSNLLVSASD 107

Query: 147 DKHIVEWNVQTCKVKCKWKGDNSSVSSLCISPDGKMLLSAG--RTIKLWVLETKEVYRHF 204
           DK +  W+V + K     KG ++ V     +P   +++S     ++++W ++T +  +  
Sbjct: 108 DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL 167

Query: 205 TGHATPVSSLMFTTIRPPNESQPFDGITGLY 235
             H+ PVS++ F        S  +DG+  ++
Sbjct: 168 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 198



 Score = 41.2 bits (95), Expect = 0.003
 Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 2/102 (1%)

Query: 112 VKGELHSKLISGGHDNRVNCIQWHQDSGCLYSCSDDKHIVEWNVQTCKVKCKWKGDNSSV 171
           VK     K    GH   V+ +++  +   L S S DK I  W     K +    G    +
Sbjct: 31  VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 90

Query: 172 SSLCISPDGKMLLSAG--RTIKLWVLETKEVYRHFTGHATPV 211
           S +  S D  +L+SA   +T+K+W + + +  +   GH+  V
Sbjct: 91  SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYV 132



 Score = 37.0 bits (84), Expect = 0.060
 Identities = 47/199 (23%), Positives = 73/199 (36%), Gaps = 27/199 (13%)

Query: 19  CAFSPHSQAYFALASTDGHLRVWETANNRL------HQEYVPSAHLSGTCT--------- 63
           C F+P S    +  S D  +R+W+    +       H + V + H +   +         
Sbjct: 135 CNFNPQSNLIVS-GSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 193

Query: 64  -CLAWAPARLQA-KESPQRKKRKSEAVGMSNQTDLLALGTAVGSILLYSTVKGELHSKLI 121
            C  W  A  Q  K            V  S     +   T   ++ L+   KG+      
Sbjct: 194 LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT 253

Query: 122 SGGHDNRVNCI--QWHQDSG-CLYSCSDDKHIVEWNVQTCKVKCKWKGDNSSVSSLCISP 178
             GH N   CI   +    G  + S S+D  +  WN+QT ++  K +G    V S    P
Sbjct: 254 --GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHP 311

Query: 179 DGKMLLSAG----RTIKLW 193
              ++ SA     +TIKLW
Sbjct: 312 TENIIASAALENDKTIKLW 330


>gi|16554627 WD repeat domain 5 [Homo sapiens]
          Length = 334

 Score = 56.2 bits (134), Expect = 1e-07
 Identities = 36/151 (23%), Positives = 70/151 (46%), Gaps = 4/151 (2%)

Query: 87  AVGMSNQTDLLALGTAVGSILLYSTVKGELHSKLISGGHDNRVNCIQWHQDSGCLYSCSD 146
           +V  S   + LA  +A   I ++    G+    +   GH   ++ + W  DS  L S SD
Sbjct: 50  SVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI--SGHKLGISDVAWSSDSNLLVSASD 107

Query: 147 DKHIVEWNVQTCKVKCKWKGDNSSVSSLCISPDGKMLLSAG--RTIKLWVLETKEVYRHF 204
           DK +  W+V + K     KG ++ V     +P   +++S     ++++W ++T +  +  
Sbjct: 108 DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL 167

Query: 205 TGHATPVSSLMFTTIRPPNESQPFDGITGLY 235
             H+ PVS++ F        S  +DG+  ++
Sbjct: 168 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 198



 Score = 41.2 bits (95), Expect = 0.003
 Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 2/102 (1%)

Query: 112 VKGELHSKLISGGHDNRVNCIQWHQDSGCLYSCSDDKHIVEWNVQTCKVKCKWKGDNSSV 171
           VK     K    GH   V+ +++  +   L S S DK I  W     K +    G    +
Sbjct: 31  VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 90

Query: 172 SSLCISPDGKMLLSAG--RTIKLWVLETKEVYRHFTGHATPV 211
           S +  S D  +L+SA   +T+K+W + + +  +   GH+  V
Sbjct: 91  SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYV 132



 Score = 37.0 bits (84), Expect = 0.060
 Identities = 47/199 (23%), Positives = 73/199 (36%), Gaps = 27/199 (13%)

Query: 19  CAFSPHSQAYFALASTDGHLRVWETANNRL------HQEYVPSAHLSGTCT--------- 63
           C F+P S    +  S D  +R+W+    +       H + V + H +   +         
Sbjct: 135 CNFNPQSNLIVS-GSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 193

Query: 64  -CLAWAPARLQA-KESPQRKKRKSEAVGMSNQTDLLALGTAVGSILLYSTVKGELHSKLI 121
            C  W  A  Q  K            V  S     +   T   ++ L+   KG+      
Sbjct: 194 LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT 253

Query: 122 SGGHDNRVNCI--QWHQDSG-CLYSCSDDKHIVEWNVQTCKVKCKWKGDNSSVSSLCISP 178
             GH N   CI   +    G  + S S+D  +  WN+QT ++  K +G    V S    P
Sbjct: 254 --GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHP 311

Query: 179 DGKMLLSAG----RTIKLW 193
              ++ SA     +TIKLW
Sbjct: 312 TENIIASAALENDKTIKLW 330


>gi|21735415 centromere protein B [Homo sapiens]
          Length = 599

 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 24/61 (39%), Positives = 40/61 (65%)

Query: 617 SEDNWDEDEEESESEKDEDVEEEDEDAEGKDEENGEDRDTASEKELNGDSDLDPENESEE 676
           SE   +E+EEE E E++ + EEE+E+ E ++EE GE  +   E+E+  + D+D + E EE
Sbjct: 403 SEGEEEEEEEEEEEEEEGEGEEEEEEGEEEEEEGGEGEELGEEEEVEEEGDVDSDEEEEE 462

Query: 677 E 677
           +
Sbjct: 463 D 463



 Score = 52.0 bits (123), Expect = 2e-06
 Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 14/78 (17%)

Query: 600 EEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDEDAEGKDEENGEDRDTASE 659
           + E  EEE ++E          +E+EEE E E++E+  EE+E+  G+ EE GE+ +   E
Sbjct: 402 KSEGEEEEEEEE----------EEEEEEGEGEEEEEEGEEEEEEGGEGEELGEEEEVEEE 451

Query: 660 KELNGDSDLDPENESEEE 677
               GD D D E E +EE
Sbjct: 452 ----GDVDSDEEEEEDEE 465



 Score = 43.9 bits (102), Expect = 5e-04
 Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 42/139 (30%)

Query: 579 VTASEKTKGATSPGQKAKLVYEEESSEEESDDEIADKDSEDNWDEDE--EESESEKDEDV 636
           +T S K++G     ++ +   EEE  E E ++E  +++ E+  + +E  EE E E++ DV
Sbjct: 397 ITTSLKSEGEEEEEEEEE--EEEEEGEGEEEEEEGEEEEEEGGEGEELGEEEEVEEEGDV 454

Query: 637 ---EEEDEDAEGKDE-----------------------------------ENGEDRDTAS 658
              EEE+ED E   E                                   E GED D+ S
Sbjct: 455 DSDEEEEEDEESSSEGLEAEDWAQGVVEAGGSFGAYGAQEEAQCPTLHFLEGGEDSDSDS 514

Query: 659 EKELNGDSDLDPENESEEE 677
           E+E + + D + E++ ++E
Sbjct: 515 EEEDDEEEDDEDEDDDDDE 533



 Score = 36.2 bits (82), Expect = 0.10
 Identities = 17/48 (35%), Positives = 26/48 (54%)

Query: 587 GATSPGQKAKLVYEEESSEEESDDEIADKDSEDNWDEDEEESESEKDE 634
           GA    Q   L + E   + +SD E  D + ED+ DED+++ E + DE
Sbjct: 491 GAQEEAQCPTLHFLEGGEDSDSDSEEEDDEEEDDEDEDDDDDEEDGDE 538



 Score = 34.7 bits (78), Expect = 0.30
 Identities = 13/29 (44%), Positives = 21/29 (72%)

Query: 614 DKDSEDNWDEDEEESESEKDEDVEEEDED 642
           D DS+   ++DEEE + ++D+D +EED D
Sbjct: 509 DSDSDSEEEDDEEEDDEDEDDDDDEEDGD 537



 Score = 33.9 bits (76), Expect = 0.51
 Identities = 25/98 (25%), Positives = 37/98 (37%), Gaps = 45/98 (45%)

Query: 601 EESSEEESDDEIADKDSEDNWDEDEE---------------------------------- 626
           EE  EEE  +E  D DS++  +EDEE                                  
Sbjct: 440 EELGEEEEVEEEGDVDSDEEEEEDEESSSEGLEAEDWAQGVVEAGGSFGAYGAQEEAQCP 499

Query: 627 -----------ESESEKDEDVEEEDEDAEGKDEENGED 653
                      +S+SE+++D EE+DED +  D+E   D
Sbjct: 500 TLHFLEGGEDSDSDSEEEDDEEEDDEDEDDDDDEEDGD 537



 Score = 33.5 bits (75), Expect = 0.66
 Identities = 13/31 (41%), Positives = 22/31 (70%)

Query: 611 EIADKDSEDNWDEDEEESESEKDEDVEEEDE 641
           E +D DSE+  DE+E++ + + D+D E+ DE
Sbjct: 508 EDSDSDSEEEDDEEEDDEDEDDDDDEEDGDE 538



 Score = 33.5 bits (75), Expect = 0.66
 Identities = 13/31 (41%), Positives = 22/31 (70%)

Query: 618 EDNWDEDEEESESEKDEDVEEEDEDAEGKDE 648
           ED+  + EEE + E+D++ E++D+D E  DE
Sbjct: 508 EDSDSDSEEEDDEEEDDEDEDDDDDEEDGDE 538



 Score = 32.7 bits (73), Expect = 1.1
 Identities = 13/32 (40%), Positives = 24/32 (75%), Gaps = 1/32 (3%)

Query: 622 DEDEEESESEKDEDVEEEDEDAEGKDEENGED 653
           ++ + +SE E DE+ ++EDED +  DEE+G++
Sbjct: 508 EDSDSDSEEEDDEEEDDEDED-DDDDEEDGDE 538


>gi|115529449 upstream binding transcription factor, RNA polymerase
           I isoform b [Homo sapiens]
          Length = 727

 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 7/99 (7%)

Query: 582 SEKTKGATS---PGQKAKLVYEEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEE 638
           S K K  T    P  K+     +  SE E DDE    + ED+ DEDEEE + E  +  E+
Sbjct: 613 SNKRKSMTKLRGPNPKSSRTTLQSKSESEEDDE----EDEDDEDEDEEEEDDENGDSSED 668

Query: 639 EDEDAEGKDEENGEDRDTASEKELNGDSDLDPENESEEE 677
             + +E   E+  ED D   E + + D D D + + + E
Sbjct: 669 GGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNE 707



 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 5/78 (6%)

Query: 600 EEESSEEESDDEIADK-----DSEDNWDEDEEESESEKDEDVEEEDEDAEGKDEENGEDR 654
           +E+  EEE DDE  D      DS ++  EDE E   E +ED E+ED+D +  ++E+ E  
Sbjct: 650 DEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESE 709

Query: 655 DTASEKELNGDSDLDPEN 672
            ++S    +GDS     N
Sbjct: 710 GSSSSSSSSGDSSDSDSN 727



 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 31/85 (36%), Positives = 43/85 (50%), Gaps = 10/85 (11%)

Query: 601 EESSEEESDDEIADKD---------SEDNWDEDEEESESE-KDEDVEEEDEDAEGKDEEN 650
           EE  EE+ DDE  D++         SED  D  E  SE E +D D  EED++ E  DE++
Sbjct: 641 EEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDD 700

Query: 651 GEDRDTASEKELNGDSDLDPENESE 675
            ED D  SE   +  S     ++S+
Sbjct: 701 DEDEDNESEGSSSSSSSSGDSSDSD 725



 Score = 31.6 bits (70), Expect = 2.5
 Identities = 15/62 (24%), Positives = 29/62 (46%)

Query: 582 SEKTKGATSPGQKAKLVYEEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDE 641
           S +  G +S         + + +EE+ +DE  D+D +++ D + E S S      +  D 
Sbjct: 665 SSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSDS 724

Query: 642 DA 643
           D+
Sbjct: 725 DS 726


>gi|115529451 upstream binding transcription factor, RNA polymerase
           I isoform b [Homo sapiens]
          Length = 727

 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 7/99 (7%)

Query: 582 SEKTKGATS---PGQKAKLVYEEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEE 638
           S K K  T    P  K+     +  SE E DDE    + ED+ DEDEEE + E  +  E+
Sbjct: 613 SNKRKSMTKLRGPNPKSSRTTLQSKSESEEDDE----EDEDDEDEDEEEEDDENGDSSED 668

Query: 639 EDEDAEGKDEENGEDRDTASEKELNGDSDLDPENESEEE 677
             + +E   E+  ED D   E + + D D D + + + E
Sbjct: 669 GGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNE 707



 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 5/78 (6%)

Query: 600 EEESSEEESDDEIADK-----DSEDNWDEDEEESESEKDEDVEEEDEDAEGKDEENGEDR 654
           +E+  EEE DDE  D      DS ++  EDE E   E +ED E+ED+D +  ++E+ E  
Sbjct: 650 DEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESE 709

Query: 655 DTASEKELNGDSDLDPEN 672
            ++S    +GDS     N
Sbjct: 710 GSSSSSSSSGDSSDSDSN 727



 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 31/85 (36%), Positives = 43/85 (50%), Gaps = 10/85 (11%)

Query: 601 EESSEEESDDEIADKD---------SEDNWDEDEEESESE-KDEDVEEEDEDAEGKDEEN 650
           EE  EE+ DDE  D++         SED  D  E  SE E +D D  EED++ E  DE++
Sbjct: 641 EEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDD 700

Query: 651 GEDRDTASEKELNGDSDLDPENESE 675
            ED D  SE   +  S     ++S+
Sbjct: 701 DEDEDNESEGSSSSSSSSGDSSDSD 725



 Score = 31.6 bits (70), Expect = 2.5
 Identities = 15/62 (24%), Positives = 29/62 (46%)

Query: 582 SEKTKGATSPGQKAKLVYEEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDE 641
           S +  G +S         + + +EE+ +DE  D+D +++ D + E S S      +  D 
Sbjct: 665 SSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSDS 724

Query: 642 DA 643
           D+
Sbjct: 725 DS 726


>gi|7657671 upstream binding transcription factor, RNA polymerase I
           isoform a [Homo sapiens]
          Length = 764

 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 7/99 (7%)

Query: 582 SEKTKGATS---PGQKAKLVYEEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEE 638
           S K K  T    P  K+     +  SE E DDE    + ED+ DEDEEE + E  +  E+
Sbjct: 650 SNKRKSMTKLRGPNPKSSRTTLQSKSESEEDDE----EDEDDEDEDEEEEDDENGDSSED 705

Query: 639 EDEDAEGKDEENGEDRDTASEKELNGDSDLDPENESEEE 677
             + +E   E+  ED D   E + + D D D + + + E
Sbjct: 706 GGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNE 744



 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 5/78 (6%)

Query: 600 EEESSEEESDDEIADK-----DSEDNWDEDEEESESEKDEDVEEEDEDAEGKDEENGEDR 654
           +E+  EEE DDE  D      DS ++  EDE E   E +ED E+ED+D +  ++E+ E  
Sbjct: 687 DEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESE 746

Query: 655 DTASEKELNGDSDLDPEN 672
            ++S    +GDS     N
Sbjct: 747 GSSSSSSSSGDSSDSDSN 764



 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 31/85 (36%), Positives = 43/85 (50%), Gaps = 10/85 (11%)

Query: 601 EESSEEESDDEIADKD---------SEDNWDEDEEESESE-KDEDVEEEDEDAEGKDEEN 650
           EE  EE+ DDE  D++         SED  D  E  SE E +D D  EED++ E  DE++
Sbjct: 678 EEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDD 737

Query: 651 GEDRDTASEKELNGDSDLDPENESE 675
            ED D  SE   +  S     ++S+
Sbjct: 738 DEDEDNESEGSSSSSSSSGDSSDSD 762



 Score = 31.6 bits (70), Expect = 2.5
 Identities = 15/62 (24%), Positives = 29/62 (46%)

Query: 582 SEKTKGATSPGQKAKLVYEEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDE 641
           S +  G +S         + + +EE+ +DE  D+D +++ D + E S S      +  D 
Sbjct: 702 SSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSDS 761

Query: 642 DA 643
           D+
Sbjct: 762 DS 763


>gi|115298668 WD repeat domain 57 (U5 snRNP specific) [Homo sapiens]
          Length = 357

 Score = 55.5 bits (132), Expect = 2e-07
 Identities = 40/151 (26%), Positives = 66/151 (43%), Gaps = 20/151 (13%)

Query: 120 LISGGHDNRVNCIQWHQDSGCLYSCSDDKHIVEWNVQ-TCKVKCKWKGDNSSVSSLCISP 178
           ++  GH+  V C ++H +   L S   D+ I+ WNV   C      KG + +V  L  + 
Sbjct: 60  MLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNT 119

Query: 179 DGKMLLSAG--RTIKLWVLETKEVYRHFTGHATPVSSLMFTTIRPPNESQPFDGITGLYF 236
           DG ML SA   +T+ +W  ET E  +   GH + V+S              +    G   
Sbjct: 120 DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC-------------YPARRGPQL 166

Query: 237 LSGAVHDRLLNVWQVRSENKEKSAVMSFTVT 267
           +     D  + +W +R    +K+A+ +F  T
Sbjct: 167 VCTGSDDGTVKLWDIR----KKAAIQTFQNT 193



 Score = 44.7 bits (104), Expect = 3e-04
 Identities = 50/213 (23%), Positives = 84/213 (39%), Gaps = 34/213 (15%)

Query: 106 ILLYSTVKGELHSKLISGGHDNRVNCIQWHQDSGCLYSCSDDKHIVEWNVQTCKVKCKWK 165
           ++L   V G+  +     GH   V  + ++ D   L+S S DK +  W+ +T +   + K
Sbjct: 89  LILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLK 148

Query: 166 GDNSSVSSLCISPDGKMLLSAGR---TIKLWVLETKEVYRHFTGHATPVSSLMFTTIRPP 222
           G  S V+S   +  G  L+  G    T+KLW +  K   + F  +   V ++ F      
Sbjct: 149 GHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFND---- 203

Query: 223 NESQPFDGITGLYFLSGAVHDRLLNVWQVRSENK-------EKSAVMSFTVTDEPVYIDL 275
                    T    +SG + D  + VW +R +NK          +V   +++ E  Y+  
Sbjct: 204 ---------TSDQIISGGI-DNDIKVWDLR-QNKLTYTMRGHADSVTGLSLSSEGSYLLS 252

Query: 276 TLSENKEE--------PVKLAVVCRDGQVHLFE 300
              +N           P +  V    G VH FE
Sbjct: 253 NAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFE 285



 Score = 32.3 bits (72), Expect = 1.5
 Identities = 16/70 (22%), Positives = 34/70 (48%), Gaps = 1/70 (1%)

Query: 127 NRVNCIQWHQDSGCLYSCSDDKHIVEWNVQTCKVKCKWKGDNSSVSSLCISPDGKMLLSA 186
           N + C  W  D   + + S D+ +  W+  + ++  K  G   S++ +   PD  +++SA
Sbjct: 287 NLLRC-SWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISA 345

Query: 187 GRTIKLWVLE 196
               +L++ E
Sbjct: 346 SSDKRLYMGE 355


>gi|84043963 eukaryotic translation initiation factor 5B [Homo
           sapiens]
          Length = 1220

 Score = 54.7 bits (130), Expect = 3e-07
 Identities = 26/77 (33%), Positives = 51/77 (66%), Gaps = 2/77 (2%)

Query: 601 EESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDEDAEGKDEENGEDRDTASEK 660
           +E+ EEE ++E  +++ E++ +E+EEE ESE  E  EE+++ ++ KD  +G+  D    K
Sbjct: 528 KENPEEEEEEEEEEEEDEESEEEEEEEGESEGSEGDEEDEKVSDEKD--SGKTLDKKPSK 585

Query: 661 ELNGDSDLDPENESEEE 677
           E++ DS+ D +++  +E
Sbjct: 586 EMSSDSEYDSDDDRTKE 602



 Score = 43.5 bits (101), Expect = 6e-04
 Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 3/76 (3%)

Query: 605 EEESDDEIADKDSEDNWDEDEEESESEKDE---DVEEEDEDAEGKDEENGEDRDTASEKE 661
           EEE D E A  D  +    DEE  + E ++   +V+E  E+ E ++EE  ED ++  E+E
Sbjct: 493 EEEEDTEDAGLDDWEAMASDEETEKVEGNKVHIEVKENPEEEEEEEEEEEEDEESEEEEE 552

Query: 662 LNGDSDLDPENESEEE 677
             G+S+    +E +E+
Sbjct: 553 EEGESEGSEGDEEDEK 568



 Score = 35.8 bits (81), Expect = 0.13
 Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 12/101 (11%)

Query: 585 TKGATSPGQKAKLVYEEESSEEESDDEIADKDSEDNWDED---EEESESEKDEDVEEEDE 641
           +K     GQK K    ++S ++   +E+ DKDS+         E  S S+ D+D  +  +
Sbjct: 93  SKDKKKKGQKGK----KQSFDDNDSEELEDKDSKSKKTAKPKVEMYSGSDDDDDFNKLPK 148

Query: 642 DAEGKDEE-----NGEDRDTASEKELNGDSDLDPENESEEE 677
            A+GK ++     +G + D  + K++   S ++   ES +E
Sbjct: 149 KAKGKAQKSNKKWDGSEEDEDNSKKIKERSRINSSGESGDE 189



 Score = 31.6 bits (70), Expect = 2.5
 Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 9/91 (9%)

Query: 593 QKAKLV--YEEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDV----EEEDEDAEGK 646
           +KAKL    E+E  E    D+   K+S+  ++E+  +S+   D  V    EE+ E     
Sbjct: 246 EKAKLRKLKEKEELETGKKDQSKQKESQRKFEEETVKSKVTVDTGVIPASEEKAETPTAA 305

Query: 647 DEENGEDRDTASEKELNGDSDLDPENESEEE 677
           +++N  D+    +K+  G+ +   E E E++
Sbjct: 306 EDDNEGDKKKKDKKKKKGEKE---EKEKEKK 333



 Score = 30.8 bits (68), Expect = 4.3
 Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 6/76 (7%)

Query: 583 EKTKGATSPGQKA------KLVYEEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDV 636
           EK KG +    KA      KL  EEE  + E ++ I   +  +   ++EE  E EK E  
Sbjct: 331 EKKKGPSKATVKAMQEALAKLKEEEERQKREEEERIKRLEELEAKRKEEERLEQEKRERK 390

Query: 637 EEEDEDAEGKDEENGE 652
           ++++++ + + ++ G+
Sbjct: 391 KQKEKERKERLKKEGK 406


>gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens]
          Length = 709

 Score = 54.7 bits (130), Expect = 3e-07
 Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 2/69 (2%)

Query: 600 EEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDEDAEGKDEENGEDRDTASE 659
           +EE  E+  +DE  D+D E+  +E+EEE E E++E+ EEE E  E   +E G D DT SE
Sbjct: 212 DEEVEEDAEEDEEVDEDGEE--EEEEEEEEEEEEEEEEEEYEQDERDQKEEGNDYDTRSE 269

Query: 660 KELNGDSDL 668
              +G   +
Sbjct: 270 ASDSGSESV 278



 Score = 50.4 bits (119), Expect = 5e-06
 Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 3/72 (4%)

Query: 600 EEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDEDAEGKDEENGEDRDTASE 659
           EEE  EE+ ++   D++ E++ +EDEE  E  ++E+ EEE+E+ E ++EE   ++D   +
Sbjct: 201 EEEGVEEDVEE---DEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQ 257

Query: 660 KELNGDSDLDPE 671
           KE   D D   E
Sbjct: 258 KEEGNDYDTRSE 269



 Score = 48.1 bits (113), Expect = 3e-05
 Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 4/95 (4%)

Query: 583 EKTKGATSPGQKAKLVYEEESSEEE-SDDEIADKDSEDNWDEDEEESESEKDEDVEEEDE 641
           E  + A+   Q +K   EE +SEE  SD E     S D    + E  E   +EDVEE++E
Sbjct: 158 EVDRRASRSSQSSK---EEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEE 214

Query: 642 DAEGKDEENGEDRDTASEKELNGDSDLDPENESEE 676
             E  +E+   D D   E+E   + + + E E EE
Sbjct: 215 VEEDAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEE 249



 Score = 48.1 bits (113), Expect = 3e-05
 Identities = 27/101 (26%), Positives = 55/101 (54%), Gaps = 7/101 (6%)

Query: 583 EKTKGATSPGQKAKLVYEEESSEEE------SDDEIADKDSEDNWDEDEEESESEKDEDV 636
           ++    +S   K ++  EE  S+ E      SD++  + ++E+   E++ E + E +ED 
Sbjct: 160 DRRASRSSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEEDA 219

Query: 637 EEEDE-DAEGKDEENGEDRDTASEKELNGDSDLDPENESEE 676
           EE++E D +G++EE  E+ +   E+E   + + D  ++ EE
Sbjct: 220 EEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEE 260



 Score = 48.1 bits (113), Expect = 3e-05
 Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 7/85 (8%)

Query: 600 EEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDEDAEGKD-EENGEDRDTAS 658
           EE++ E+E  DE  +++ E+  +E+EEE E E++ + +E D+  EG D +   E  D+ S
Sbjct: 216 EEDAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEEGNDYDTRSEASDSGS 275

Query: 659 EK------ELNGDSDLDPENESEEE 677
           E        +   S  D  +E ++E
Sbjct: 276 ESVSFTDGSVRSGSGTDGSDEKKKE 300



 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 22/73 (30%), Positives = 40/73 (54%)

Query: 604 SEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDEDAEGKDEENGEDRDTASEKELN 663
           +EEE  +E  ++D E   D +E+E   E  E+ EEE+E+ E ++EE  E+ +     +  
Sbjct: 200 NEEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKE 259

Query: 664 GDSDLDPENESEE 676
             +D D  +E+ +
Sbjct: 260 EGNDYDTRSEASD 272



 Score = 42.4 bits (98), Expect = 0.001
 Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 4/75 (5%)

Query: 603 SSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDEDAEGKDEENGEDRDTASEKEL 662
           SS+E+ ++   +++  +   E++EE E + +ED EE DED E ++EE  E+ +   E+E 
Sbjct: 190 SSDEQGNNTENEEEGVEEDVEEDEEVEEDAEED-EEVDEDGEEEEEEEEEEEEEEEEEEE 248

Query: 663 NGDSDLDPENESEEE 677
             + D   E + +EE
Sbjct: 249 EYEQD---ERDQKEE 260



 Score = 39.7 bits (91), Expect = 0.009
 Identities = 23/94 (24%), Positives = 40/94 (42%)

Query: 584 KTKGATSPGQKAKLVYEEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDEDA 643
           + K  T  G +   +  +  +   S     + +SE+   + E  S    DE     + + 
Sbjct: 143 RAKSPTPDGSERIGLEVDRRASRSSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEE 202

Query: 644 EGKDEENGEDRDTASEKELNGDSDLDPENESEEE 677
           EG +E+  ED +   + E + + D D E E EEE
Sbjct: 203 EGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEE 236


>gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens]
          Length = 727

 Score = 54.7 bits (130), Expect = 3e-07
 Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 2/69 (2%)

Query: 600 EEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDEDAEGKDEENGEDRDTASE 659
           +EE  E+  +DE  D+D E+  +E+EEE E E++E+ EEE E  E   +E G D DT SE
Sbjct: 212 DEEVEEDAEEDEEVDEDGEE--EEEEEEEEEEEEEEEEEEYEQDERDQKEEGNDYDTRSE 269

Query: 660 KELNGDSDL 668
              +G   +
Sbjct: 270 ASDSGSESV 278



 Score = 50.4 bits (119), Expect = 5e-06
 Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 3/72 (4%)

Query: 600 EEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDEDAEGKDEENGEDRDTASE 659
           EEE  EE+ ++   D++ E++ +EDEE  E  ++E+ EEE+E+ E ++EE   ++D   +
Sbjct: 201 EEEGVEEDVEE---DEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQ 257

Query: 660 KELNGDSDLDPE 671
           KE   D D   E
Sbjct: 258 KEEGNDYDTRSE 269



 Score = 48.1 bits (113), Expect = 3e-05
 Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 4/95 (4%)

Query: 583 EKTKGATSPGQKAKLVYEEESSEEE-SDDEIADKDSEDNWDEDEEESESEKDEDVEEEDE 641
           E  + A+   Q +K   EE +SEE  SD E     S D    + E  E   +EDVEE++E
Sbjct: 158 EVDRRASRSSQSSK---EEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEE 214

Query: 642 DAEGKDEENGEDRDTASEKELNGDSDLDPENESEE 676
             E  +E+   D D   E+E   + + + E E EE
Sbjct: 215 VEEDAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEE 249



 Score = 48.1 bits (113), Expect = 3e-05
 Identities = 27/101 (26%), Positives = 55/101 (54%), Gaps = 7/101 (6%)

Query: 583 EKTKGATSPGQKAKLVYEEESSEEE------SDDEIADKDSEDNWDEDEEESESEKDEDV 636
           ++    +S   K ++  EE  S+ E      SD++  + ++E+   E++ E + E +ED 
Sbjct: 160 DRRASRSSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEEDA 219

Query: 637 EEEDE-DAEGKDEENGEDRDTASEKELNGDSDLDPENESEE 676
           EE++E D +G++EE  E+ +   E+E   + + D  ++ EE
Sbjct: 220 EEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEE 260



 Score = 48.1 bits (113), Expect = 3e-05
 Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 7/85 (8%)

Query: 600 EEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDEDAEGKD-EENGEDRDTAS 658
           EE++ E+E  DE  +++ E+  +E+EEE E E++ + +E D+  EG D +   E  D+ S
Sbjct: 216 EEDAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEEGNDYDTRSEASDSGS 275

Query: 659 EK------ELNGDSDLDPENESEEE 677
           E        +   S  D  +E ++E
Sbjct: 276 ESVSFTDGSVRSGSGTDGSDEKKKE 300



 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 22/73 (30%), Positives = 40/73 (54%)

Query: 604 SEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDEDAEGKDEENGEDRDTASEKELN 663
           +EEE  +E  ++D E   D +E+E   E  E+ EEE+E+ E ++EE  E+ +     +  
Sbjct: 200 NEEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKE 259

Query: 664 GDSDLDPENESEE 676
             +D D  +E+ +
Sbjct: 260 EGNDYDTRSEASD 272



 Score = 42.4 bits (98), Expect = 0.001
 Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 4/75 (5%)

Query: 603 SSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDEDAEGKDEENGEDRDTASEKEL 662
           SS+E+ ++   +++  +   E++EE E + +ED EE DED E ++EE  E+ +   E+E 
Sbjct: 190 SSDEQGNNTENEEEGVEEDVEEDEEVEEDAEED-EEVDEDGEEEEEEEEEEEEEEEEEEE 248

Query: 663 NGDSDLDPENESEEE 677
             + D   E + +EE
Sbjct: 249 EYEQD---ERDQKEE 260



 Score = 39.7 bits (91), Expect = 0.009
 Identities = 23/94 (24%), Positives = 40/94 (42%)

Query: 584 KTKGATSPGQKAKLVYEEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDEDA 643
           + K  T  G +   +  +  +   S     + +SE+   + E  S    DE     + + 
Sbjct: 143 RAKSPTPDGSERIGLEVDRRASRSSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEE 202

Query: 644 EGKDEENGEDRDTASEKELNGDSDLDPENESEEE 677
           EG +E+  ED +   + E + + D D E E EEE
Sbjct: 203 EGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEE 236


>gi|169210053 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 185

 Score = 54.3 bits (129), Expect = 4e-07
 Identities = 27/61 (44%), Positives = 39/61 (63%)

Query: 593 QKAKLVYEEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDEDAEGKDEENGE 652
           Q+   V EEE  EEE + E  +K+ E   DE+EEE E EK+ED EEE+++ +  +EE  E
Sbjct: 113 QQGLPVEEEEVEEEEEEVEEEEKEEEKEEDEEEEEKEEEKEEDEEEEEKEGKKMEEEKVE 172

Query: 653 D 653
           +
Sbjct: 173 E 173



 Score = 47.4 bits (111), Expect = 4e-05
 Identities = 26/82 (31%), Positives = 49/82 (59%), Gaps = 1/82 (1%)

Query: 590 SPGQKAKLVYEEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDEDAEGKDEE 649
           S  + A LV EE S+++    E  + + E+  + +EEE E EK+ED EEE+++ E +++E
Sbjct: 98  SVARTAALVAEECSAQQGLPVEEEEVEEEEE-EVEEEEKEEEKEEDEEEEEKEEEKEEDE 156

Query: 650 NGEDRDTASEKELNGDSDLDPE 671
             E+++    +E   + ++D E
Sbjct: 157 EEEEKEGKKMEEEKVEEEIDTE 178



 Score = 37.4 bits (85), Expect = 0.046
 Identities = 19/56 (33%), Positives = 31/56 (55%)

Query: 622 DEDEEESESEKDEDVEEEDEDAEGKDEENGEDRDTASEKELNGDSDLDPENESEEE 677
           +E+E E E E+ E+ E+E+E  E ++EE  E+     E+E   +     E + EEE
Sbjct: 119 EEEEVEEEEEEVEEEEKEEEKEEDEEEEEKEEEKEEDEEEEEKEGKKMEEEKVEEE 174



 Score = 30.4 bits (67), Expect = 5.6
 Identities = 15/52 (28%), Positives = 27/52 (51%)

Query: 626 EESESEKDEDVEEEDEDAEGKDEENGEDRDTASEKELNGDSDLDPENESEEE 677
           EE  +++   VEEE+ + E ++ E  E  +   E E   + + + E + EEE
Sbjct: 108 EECSAQQGLPVEEEEVEEEEEEVEEEEKEEEKEEDEEEEEKEEEKEEDEEEE 159


>gi|4759276 RNA, U3 small nucleolar interacting protein 2 [Homo
           sapiens]
          Length = 475

 Score = 53.9 bits (128), Expect = 5e-07
 Identities = 39/141 (27%), Positives = 60/141 (42%), Gaps = 27/141 (19%)

Query: 124 GHDNRVNCIQWHQDSGCLYSCSDDKHIVEWNVQTCK-----------VKCKWKGDNSSVS 172
           GH   + C+    D   ++S + D  I++W+V++ +            + K  G +S V 
Sbjct: 144 GHQLSITCLVVTPDDSAIFSAAKDCSIIKWSVESGRKLHVIPRAKKGAEGKPPGHSSHVL 203

Query: 173 SLCISPDGKMLLSAGRT--IKLWVLETKEVYRHFTGHATPVSSLMFTTIRPPNESQPFDG 230
            + IS DGK L S  R+  I +W  ++ +    FTGH   VS L F              
Sbjct: 204 CMAISSDGKYLASGDRSKLILIWEAQSCQHLYTFTGHRDAVSGLAFR------------- 250

Query: 231 ITGLYFLSGAVHDRLLNVWQV 251
             G + L    HDR + VW V
Sbjct: 251 -RGTHQLYSTSHDRSVKVWNV 270



 Score = 39.7 bits (91), Expect = 0.009
 Identities = 30/135 (22%), Positives = 52/135 (38%), Gaps = 16/135 (11%)

Query: 124 GHDNRVNCIQWHQDSGCLYSCSDDKHIVEWNVQTCKVKCKWKGDNSSVSSLCISPDGKML 183
           GH + V C+    D   L S    K I+ W  Q+C+    + G   +VS L        L
Sbjct: 197 GHSSHVLCMAISSDGKYLASGDRSKLILIWEAQSCQHLYTFTGHRDAVSGLAFRRGTHQL 256

Query: 184 LSAG--RTIKLWVLETKEVYRHFTGHATPVSSLMFTTIRPPNESQPFDGITGLYFLSGAV 241
            S    R++K+W +          GH   V++L              D ++    ++   
Sbjct: 257 YSTSHDRSVKVWNVAENSYVETLFGHQDAVAAL--------------DALSRECCVTAGG 302

Query: 242 HDRLLNVWQVRSENK 256
            D  + VW++  E++
Sbjct: 303 RDGTVRVWKIPEESQ 317


>gi|21071067 TBP-associated factor 5 [Homo sapiens]
          Length = 800

 Score = 53.9 bits (128), Expect = 5e-07
 Identities = 56/206 (27%), Positives = 86/206 (41%), Gaps = 27/206 (13%)

Query: 124 GHDNRVNCIQWHQDSGCLYSCSDDKHIVEWNVQTCKVKCKWKGDNSSVSSLCISPDGKML 183
           GH   V    +  D   L S S+D  +  W++QT      +KG N  V     SP G   
Sbjct: 541 GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYF 600

Query: 184 LSAG--RTIKLWVLETKEVYRHFTGHATPVSSLMFTTIRPPNESQPFDGITGLYFLSGAV 241
           +S G  R  +LW  +  +  R F GH   V+   F     PN +         Y  +G+ 
Sbjct: 601 VSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRF----HPNSN---------YVATGSA 647

Query: 242 HDRLLNVWQVRSENKEKSAVMSFTVTDEPVYIDLTLSENKEEPVKLAVVCRDGQVHLFE- 300
            DR + +W V + N     V  FT    P++  LT S N      LA    DG+V L++ 
Sbjct: 648 -DRTVRLWDVLNGN----CVRIFTGHKGPIH-SLTFSPNGR---FLATGATDGRVLLWDI 698

Query: 301 --HILNGYCKKPLTSNCTIQIATPGK 324
              ++ G  K    + C+++ +  G+
Sbjct: 699 GHGLMVGELKGHTDTVCSLRFSRDGE 724



 Score = 42.0 bits (97), Expect = 0.002
 Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 4/100 (4%)

Query: 121 ISGGHDNRVNCIQWHQDSGCLYSCSDDKHIVEWNVQTCKVKCKWKGDNSSVSSLCISPDG 180
           I  GH   VNC ++H +S  + + S D+ +  W+V        + G    + SL  SP+G
Sbjct: 622 IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNG 681

Query: 181 KMLLSA---GRTIKLWVLETKEVYRHFTGHATPVSSLMFT 217
           + L +    GR + LW +    +     GH   V SL F+
Sbjct: 682 RFLATGATDGRVL-LWDIGHGLMVGELKGHTDTVCSLRFS 720



 Score = 36.2 bits (82), Expect = 0.10
 Identities = 36/171 (21%), Positives = 67/171 (39%), Gaps = 8/171 (4%)

Query: 26  QAYFALASTDGH-LRVWETANNRLHQEYVPSAHLSGTCTCLAWAPARLQAKESPQRKKRK 84
           Q +  L    GH   VW+T  +     +V   H         WA    Q           
Sbjct: 573 QTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGH---DRVARLWATDHYQPLRIFAGHLAD 629

Query: 85  SEAVGMSNQTDLLALGTAVGSILLYSTVKGELHSKLISGGHDNRVNCIQWHQDSGCLYSC 144
                    ++ +A G+A  ++ L+  + G  +   I  GH   ++ + +  +   L + 
Sbjct: 630 VNCTRFHPNSNYVATGSADRTVRLWDVLNG--NCVRIFTGHKGPIHSLTFSPNGRFLATG 687

Query: 145 SDDKHIVEWNVQTCKVKCKWKGDNSSVSSLCISPDGKMLLSAG--RTIKLW 193
           + D  ++ W++    +  + KG   +V SL  S DG++L S     T++LW
Sbjct: 688 ATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLW 738


>gi|5803221 WD repeat-containing protein 3 [Homo sapiens]
          Length = 943

 Score = 53.1 bits (126), Expect = 8e-07
 Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 4/121 (3%)

Query: 97  LALGTAVGSILLYSTVKGELHSKLISGGHDNRVNCIQWHQDSGCLYSCSDDKHIVEWNVQ 156
           LA+G   GSI ++S + GE    +   GH   +  +++ Q  G L S S D  I+ W+V 
Sbjct: 80  LAVGYEDGSIRIFSLLSGE--GNVTFNGHKAAITTLKYDQLGGRLASGSKDTDIIVWDVI 137

Query: 157 TCKVKCKWKGDNSSVSSLCISPDGKMLLSAGR--TIKLWVLETKEVYRHFTGHATPVSSL 214
                 + KG   +++      +  +L+++G+   +K W L+T+  ++   GH T V  L
Sbjct: 138 NESGLYRLKGHKDAITQALFLREKNLLVTSGKDTMVKWWDLDTQHCFKTMVGHRTEVWGL 197

Query: 215 M 215
           +
Sbjct: 198 V 198



 Score = 40.8 bits (94), Expect = 0.004
 Identities = 24/106 (22%), Positives = 53/106 (50%), Gaps = 4/106 (3%)

Query: 90  MSNQTDLLALGTAVGSILLYSTVKGELHSKLISGGHDNRVNCIQWHQDSGCLYSCSDDKH 149
           +S+   L+A G+A  ++ ++    G+ H  L +  HD+ V  +Q+   S   ++   D  
Sbjct: 599 ISHDGALIATGSADRNVKIWGLDFGDCHKSLFA--HDDSVMYLQFVPKSHLFFTAGKDHK 656

Query: 150 IVEWNVQTCKVKCKWKGDNSSVSSLCISPDGKMLLSAG--RTIKLW 193
           I +W+    +     +G +  +  L +SP G  ++S+   ++++LW
Sbjct: 657 IKQWDADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSSSHDKSLRLW 702


>gi|55956788 nucleolin [Homo sapiens]
          Length = 710

 Score = 52.8 bits (125), Expect = 1e-06
 Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 17/92 (18%)

Query: 600 EEESSEEESDDEIADKDSEDNWDEDEEESESEK-----------------DEDVEEEDED 642
           E+E  E++ DDE  D D ED+ +E+  E+   K                 DED EE+DED
Sbjct: 185 EDEDDEDDEDDEDDDDDEEDDSEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDDED 244

Query: 643 AEGKDEENGEDRDTASEKELNGDSDLDPENES 674
            +  D+E+ ED D   ++E   + + +P  E+
Sbjct: 245 EDDDDDEDDEDDDDEDDEEEEEEEEEEPVKEA 276



 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 1/82 (1%)

Query: 578 QVTASEKTKGATSPGQKAKLVYEEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVE 637
           + T ++  K A     KAK V E+E  EE+ +DE  D D +D  D+DE++ E E++E+ E
Sbjct: 212 ETTPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDDDDDEDDEDDDDEDDEEEEEEEE-E 270

Query: 638 EEDEDAEGKDEENGEDRDTASE 659
           E  ++A GK ++    +  A E
Sbjct: 271 EPVKEAPGKRKKEMAKQKAAPE 292



 Score = 50.1 bits (118), Expect = 7e-06
 Identities = 43/151 (28%), Positives = 65/151 (43%), Gaps = 52/151 (34%)

Query: 579 VTASEKTKGATSPGQKAKL----------VYEEESSEE-ESDDEIADKDSED-------- 619
           + A+   KGA  P + AK             E++ SEE E DDE  D+D ++        
Sbjct: 118 LVATPGKKGAAIPAKGAKNGKNAKKEDSDEEEDDDSEEDEEDDEDEDEDEDEIEPAAMKA 177

Query: 620 ------NWDEDEEESESEKDEDVEEEDED---------AEGK------------------ 646
                 + DED+E+ E ++D+D +EED+          A+GK                  
Sbjct: 178 AAAAPASEDEDDEDDEDDEDDDDDEEDDSEEEAMETTPAKGKKAAKVVPVKAKNVAEDED 237

Query: 647 DEENGEDRDTASEKELNGDSDLDPENESEEE 677
           +EE+ ED D   +++   D D D E E EEE
Sbjct: 238 EEEDDEDEDDDDDEDDEDDDDEDDEEEEEEE 268



 Score = 45.4 bits (106), Expect = 2e-04
 Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 21/94 (22%)

Query: 588 ATSPGQKAKLVYEEESSEEESDDEIADKDSE--------------------DNWDEDEEE 627
           A +P  + +   ++E  E++ DDE  D + E                     N  EDE+E
Sbjct: 179 AAAPASEDEDDEDDEDDEDDDDDEEDDSEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDE 238

Query: 628 SESEKDEDVEEEDEDAEGKDEENGEDRDTASEKE 661
            E ++DED +++DED E  D+E+ E+ +   E+E
Sbjct: 239 EEDDEDED-DDDDEDDEDDDDEDDEEEEEEEEEE 271


>gi|156071450 nardilysin isoform a [Homo sapiens]
          Length = 1219

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 31/102 (30%), Positives = 56/102 (54%), Gaps = 2/102 (1%)

Query: 560 KTFQKLSHLHGKLILLITQVTASEKTKGATSPGQKAKLVYEEESSEEESDDEIADKDSED 619
           K ++ +   +G   LLI+ ++  E   G T+  ++ + V EEE  ++E      + D E+
Sbjct: 111 KQYRYIKLQNGLQALLISDLSNMEGKTGNTTDDEEEEEVEEEEEDDDEDSGAEIEDDDEE 170

Query: 620 NWDEDEEESESEKDEDVEEEDEDAEGKDEENGEDRDTASEKE 661
            +D DE+E + E D+D++ ED + E + EE  E R   +EK+
Sbjct: 171 GFD-DEDEFDDEHDDDLDTEDNELE-ELEERAEARKKTTEKQ 210



 Score = 43.1 bits (100), Expect = 8e-04
 Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 3/56 (5%)

Query: 622 DEDEEESESEKDEDVEEEDEDAEGKDEENGEDRDTASEKELNGDSDLDPENESEEE 677
           DE+EEE E E+++D E+   + E  DEE  +D D   ++    D DLD E+   EE
Sbjct: 143 DEEEEEVEEEEEDDDEDSGAEIEDDDEEGFDDEDEFDDEH---DDDLDTEDNELEE 195


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.313    0.130    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,252,384
Number of Sequences: 37866
Number of extensions: 1408246
Number of successful extensions: 33202
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 488
Number of HSP's that attempted gapping in prelim test: 9735
Number of HSP's gapped (non-prelim): 10919
length of query: 677
length of database: 18,247,518
effective HSP length: 109
effective length of query: 568
effective length of database: 14,120,124
effective search space: 8020230432
effective search space used: 8020230432
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 65 (29.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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