PCDHGC4 877

Name: PCDHGC4	Sequence: fasta or formatted (938aa)		NCBI GI: 11128025
Description: protocadherin gamma subfamily C, 4 isoform 1 precursor		Referenced in: Cadherins and Related Proteins
Other entries for this name: alt prot [871aa] protocadherin gamma subfamily C, 4 isoform 2 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.2 77 2 C cysteine 1.5 14 1 D aspartate 6.7 63 2 E glutamate 4.9 46 2 F phenylalanine 3.8 36 2 G glycine 7.5 70 3 H histidine 1.7 16 1 I isoleucine 2.9 27 1 K lysine 2.7 25 3 L leucine 10.9 102 3 M methionine 1.2 11 2 N asparagine 4.3 40 2 P proline 8.2 77 2 Q glutamine 3.7 35 2 R arginine 6.2 58 3 S serine 10.1 95 2 T threonine 5.1 48 2 V valine 7.5 70 2 W tryptophan 0.6 6 1 Y tyrosine 2.3 22 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 protocadherin gamma subfamily C, 4 isoform 1 precurs... PCDHGC4 0.864 protocadherin gamma subfamily C, 4 isoform 2 precurs... PCDHGC5 0.486 protocadherin gamma subfamily C, 5 isoform 1 precurs... PCDHGA11 0.436 protocadherin gamma subfamily A, 11 isoform 1 precur... PCDHGA4 0.434 protocadherin gamma subfamily A, 4 isoform 1 precurs... PCDHGC3 0.433 protocadherin gamma subfamily C, 3 isoform 1 precurs... PCDHGB5 0.432 protocadherin gamma subfamily B, 5 isoform 1 precurs... PCDHGB1 0.428 protocadherin gamma subfamily B, 1 isoform 1 precurs... PCDHGA5 0.427 protocadherin gamma subfamily A, 5 isoform 1 precurs... PCDHGA6 0.425 protocadherin gamma subfamily A, 6 isoform 1 precurs... PCDHGA3 0.424 protocadherin gamma subfamily A, 3 isoform 1 precurs... PCDHGA1 0.421 protocadherin gamma subfamily A, 1 isoform 1 precurs... PCDHGB4 0.421 protocadherin gamma subfamily B, 4 isoform 1 precurs... PCDHGA10 0.421 protocadherin gamma subfamily A, 10 isoform 1 precur... PCDHGB7 0.421 protocadherin gamma subfamily B, 7 isoform 1 precurs... PCDHGA12 0.420 protocadherin gamma subfamily A, 12 isoform 1 precurs... PCDHGB2 0.420 protocadherin gamma subfamily B, 2 isoform 1 precurs... PCDHGB6 0.419 protocadherin gamma subfamily B, 6 isoform 1 precurs... PCDHGA2 0.419 protocadherin gamma subfamily A, 2 isoform 1 precurs... PCDHGA8 0.416 protocadherin gamma subfamily A, 8 isoform 1 precurs... PCDHGA9 0.416 protocadherin gamma subfamily A, 9 isoform 1 precurs... PCDHGA7 0.414 protocadherin gamma subfamily A, 7 isoform 1 precurs... PCDHGB3 0.411 protocadherin gamma subfamily B, 3 isoform 1 precurs... PCDHGC5 0.352 protocadherin gamma subfamily C, 5 isoform 2 precurs... PCDHAC2 0.325 protocadherin alpha subfamily C, 2 isoform 1 precurso... PCDHAC2 0.314 protocadherin alpha subfamily C, 2 isoform 2 precurs... PCDHA8 0.310 protocadherin alpha 8 isoform 1 precursor PCDHGA11 0.306 protocadherin gamma subfamily A, 11 isoform 2 precur... PCDHAC1 0.305 protocadherin alpha subfamily C, 1 isoform 1 precurs... PCDHGC3 0.304 protocadherin gamma subfamily C, 3 isoform 2 precurs... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.