Guide to the Human Genome
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Name: SLC39A13 Sequence: fasta or formatted (371aa) NCBI GI: 190014617
Description:

solute carrier family 39 (zinc transporter), member 13 isoform a

Referenced in:

Solute Carrier Families

Other entries for this name:
alt prot [364aa] solute carrier family 39 (zinc transporter), member 13 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.9         44           5
 C cysteine            2.7         10           1
 D aspartate           2.7         10           1
 E glutamate           5.1         19           3
 F phenylalanine       4.0         15           1
 G glycine            11.3         42           2
 H histidine           1.3          5           1
 I isoleucine          3.5         13           1
 K lysine              2.7         10           2
 L leucine            18.3         68           4
 M methionine          2.2          8           1
 N asparagine          2.2          8           1
 P proline             5.1         19           1
 Q glutamine           3.8         14           5
 R arginine            3.2         12           1
 S serine              7.0         26           1
 T threonine           4.6         17           2
 V valine              5.4         20           2
 W tryptophan          2.2          8           1
 Y tyrosine            0.8          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 39 (zinc transporter), member... 
SLC39A13              0.971   solute carrier family 39 (zinc transporter), member ...
SLC39A7               0.237   solute carrier family 39, member 7 
SLC39A7               0.237   solute carrier family 39, member 7 
SLC39A4               0.126   solute carrier family 39 (zinc transporter), member...
SLC39A4               0.126   solute carrier family 39 (zinc transporter), member...
SLC39A5               0.112   solute carrier family 39 (metal ion transporter), m...
SLC39A5               0.112   solute carrier family 39 (metal ion transporter), m...
SLC39A12              0.107   solute carrier family 39 (zinc transporter), member...
SLC39A12              0.101   solute carrier family 39 (zinc transporter), member...
SLC39A10              0.081   solute carrier family 39 (zinc transporter), member...
SLC39A10              0.081   solute carrier family 39 (zinc transporter), member ...
SLC39A14              0.080   solute carrier family 39 (zinc transporter), member...
SLC39A6               0.077   solute carrier family 39 (zinc transporter), member...
SLC39A14              0.077   solute carrier family 39 (zinc transporter), member...
SLC39A14              0.077   solute carrier family 39 (zinc transporter), member...
SLC39A6               0.069   solute carrier family 39 (zinc transporter), member...
SLC39A14              0.067   solute carrier family 39 (zinc transporter), member...
SLC39A8               0.066   solute carrier family 39 (zinc transporter), member ...
SLC39A8               0.066   solute carrier family 39 (zinc transporter), member...
SLC39A8               0.066   solute carrier family 39 (zinc transporter), member...
SLC39A8               0.066   solute carrier family 39 (zinc transporter), member...
SLC39A9               0.025   solute carrier family 39 (zinc transporter), member ...
SLC39A1               0.022   solute carrier family 39 (zinc transporter), member ...
SLC39A11              0.022   solute carrier family 39, member 11 isoform 2 [Homo...
SLC39A11              0.021   solute carrier family 39, member 11 isoform 1 [Homo...
SLC39A3               0.020   solute carrier family 39 (zinc transporter), member ...
LOC388948             0.013   PREDICTED: hypothetical protein isoform 1 
LOC388948             0.013   PREDICTED: hypothetical protein isoform 7 
LOC388948             0.013   PREDICTED: hypothetical protein isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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