Search of human proteins with 11056036

Search of human proteins with 11056036

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|11056036 tubulin tyrosine ligase-like family, member 12
[Homo sapiens]
         (644 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|11056036 tubulin tyrosine ligase-like family, member 12 [Homo...  1346   0.0  
gi|99028883 tubulin tyrosine ligase-like family, member 2 [Homo ...    78   2e-14
gi|50658079 tubulin tyrosine ligase-like family, member 5 [Homo ...    56   9e-08
gi|75677580 tubulin tyrosine ligase-like family, member 13 [Homo...    54   6e-07
gi|195963418 tubulin tyrosine ligase-like family, member 6 isofo...    52   2e-06
gi|94536793 tubulin tyrosine ligase-like family, member 7 [Homo ...    50   5e-06
gi|11068135 tubulin tyrosine ligase-like family, member 1 [Homo ...    49   1e-05
gi|109134340 tubulin tyrosine ligase-like family, member 3 [Homo...    49   2e-05
gi|217330594 tubulin tyrosine ligase-like family, member 4 [Homo...    46   1e-04
gi|122937293 tubulin tyrosine ligase-like family, member 8 [Homo...    44   4e-04
gi|212720861 tubulin tyrosine ligase-like family, member 11 a [H...    44   5e-04
gi|89363028 tubulin tyrosine ligase-like family, member 11 b [Ho...    44   5e-04
gi|19923399 Ras-GTPase activating protein SH3 domain-binding pro...    32   1.8  
gi|45359849 Ras-GTPase activating protein SH3 domain-binding pro...    32   1.8  
gi|45359846 Ras-GTPase activating protein SH3 domain-binding pro...    32   1.8  
gi|33946297 zinc finger protein 326 isoform 1 [Homo sapiens]           32   1.8  
gi|16904383 leucine rich repeat containing 7 [Homo sapiens]            30   5.3  
gi|6912398 general transcription factor IIIC, polypeptide 3, 102...    30   5.3  
gi|142976783 PDZ domain containing RING finger 4 [Homo sapiens]        30   6.9  
gi|145312251 EPH receptor A6 isoform a [Homo sapiens]                  30   6.9  
gi|209862789 microtubule associated monoxygenase, calponin and L...    30   6.9  
gi|40255047 pleckstrin homology domain containing, family H (wit...    30   6.9  
gi|113426528 PREDICTED: similar to hCG2042536 [Homo sapiens]           30   9.0  
gi|113426210 PREDICTED: similar to hCG2042536 [Homo sapiens]           30   9.0  

>gi|11056036 tubulin tyrosine ligase-like family, member 12 [Homo
           sapiens]
          Length = 644

 Score = 1346 bits (3484), Expect = 0.0
 Identities = 644/644 (100%), Positives = 644/644 (100%)

Query: 1   MEAERGPERRPAERSSPGQTPEEGAQALAEFAALHGPALRASGVPERYWGRLLHKLEHEV 60
           MEAERGPERRPAERSSPGQTPEEGAQALAEFAALHGPALRASGVPERYWGRLLHKLEHEV
Sbjct: 1   MEAERGPERRPAERSSPGQTPEEGAQALAEFAALHGPALRASGVPERYWGRLLHKLEHEV 60

Query: 61  FDAGEVFGIMQVEEVEEEEDEAAREVRKQQPNPGNELCYKVIVTRESGLQAAHPNSIFLI 120
           FDAGEVFGIMQVEEVEEEEDEAAREVRKQQPNPGNELCYKVIVTRESGLQAAHPNSIFLI
Sbjct: 61  FDAGEVFGIMQVEEVEEEEDEAAREVRKQQPNPGNELCYKVIVTRESGLQAAHPNSIFLI 120

Query: 121 DHAWTCRVEHARQQLQQVPGLLHRMANLMGIEFHGELPSTEAVALVLEEMWKFNQTYQLA 180
           DHAWTCRVEHARQQLQQVPGLLHRMANLMGIEFHGELPSTEAVALVLEEMWKFNQTYQLA
Sbjct: 121 DHAWTCRVEHARQQLQQVPGLLHRMANLMGIEFHGELPSTEAVALVLEEMWKFNQTYQLA 180

Query: 181 HGTAEEKMPVWYIMDEFGSRIQHADVPSFATAPFFYMPQQVAYTLLWPLRDLDTGEEVTR 240
           HGTAEEKMPVWYIMDEFGSRIQHADVPSFATAPFFYMPQQVAYTLLWPLRDLDTGEEVTR
Sbjct: 181 HGTAEEKMPVWYIMDEFGSRIQHADVPSFATAPFFYMPQQVAYTLLWPLRDLDTGEEVTR 240

Query: 241 DFAYGETDPLIRKCMLLPWAPTDMLDLSSCTPEPPAEHYQAILEENKEKLPLDINPVVHP 300
           DFAYGETDPLIRKCMLLPWAPTDMLDLSSCTPEPPAEHYQAILEENKEKLPLDINPVVHP
Sbjct: 241 DFAYGETDPLIRKCMLLPWAPTDMLDLSSCTPEPPAEHYQAILEENKEKLPLDINPVVHP 300

Query: 301 HGHIFKVYTDVQQVASSLTHPRFTLTQSEADADILFNFSHFKDYRKLSQERPGVLLNQFP 360
           HGHIFKVYTDVQQVASSLTHPRFTLTQSEADADILFNFSHFKDYRKLSQERPGVLLNQFP
Sbjct: 301 HGHIFKVYTDVQQVASSLTHPRFTLTQSEADADILFNFSHFKDYRKLSQERPGVLLNQFP 360

Query: 361 CENLLTVKDCLASIARRAGGPEGPPWLPRTFNLRTELPQFVSYFQQRERWGEDNHWICKP 420
           CENLLTVKDCLASIARRAGGPEGPPWLPRTFNLRTELPQFVSYFQQRERWGEDNHWICKP
Sbjct: 361 CENLLTVKDCLASIARRAGGPEGPPWLPRTFNLRTELPQFVSYFQQRERWGEDNHWICKP 420

Query: 421 WNLARSLDTHVTKSLHSIIRHRESTPKVVSKYIESPVLFLREDVGKVKFDIRYIVLLRSV 480
           WNLARSLDTHVTKSLHSIIRHRESTPKVVSKYIESPVLFLREDVGKVKFDIRYIVLLRSV
Sbjct: 421 WNLARSLDTHVTKSLHSIIRHRESTPKVVSKYIESPVLFLREDVGKVKFDIRYIVLLRSV 480

Query: 481 RPLRLFVYDVFWLRFSNRAFALNDLDDYEKHFTVMNYDPDVVLKQVHCEEFIPEFEKQYP 540
           RPLRLFVYDVFWLRFSNRAFALNDLDDYEKHFTVMNYDPDVVLKQVHCEEFIPEFEKQYP
Sbjct: 481 RPLRLFVYDVFWLRFSNRAFALNDLDDYEKHFTVMNYDPDVVLKQVHCEEFIPEFEKQYP 540

Query: 541 EFPWTDVQAEIFRAFTELFQVACAKPPPLGLCDYPSSRAMYAVDLMLKWDNGPDGRRVMQ 600
           EFPWTDVQAEIFRAFTELFQVACAKPPPLGLCDYPSSRAMYAVDLMLKWDNGPDGRRVMQ
Sbjct: 541 EFPWTDVQAEIFRAFTELFQVACAKPPPLGLCDYPSSRAMYAVDLMLKWDNGPDGRRVMQ 600

Query: 601 PQILEVNFNPDCERACRYHPTFFNDVFSTLFLDQPGGCHVTCLV 644
           PQILEVNFNPDCERACRYHPTFFNDVFSTLFLDQPGGCHVTCLV
Sbjct: 601 PQILEVNFNPDCERACRYHPTFFNDVFSTLFLDQPGGCHVTCLV 644


>gi|99028883 tubulin tyrosine ligase-like family, member 2 [Homo
           sapiens]
          Length = 592

 Score = 78.2 bits (191), Expect = 2e-14
 Identities = 58/192 (30%), Positives = 94/192 (48%), Gaps = 14/192 (7%)

Query: 327 QSEADADILFNFSHFKDYRKLSQERPGVLLNQFPCENLLTVKDCLASIA---RRAGGPEG 383
           Q+  D ++ +  S F+   + +  +P   LN  P    LT KDCLA      RR  G   
Sbjct: 116 QNAEDWNLYWRTSSFR-MTEHNSVKPWQQLNHHPGTTKLTRKDCLAKHLKHMRRMYGTSL 174

Query: 384 PPWLPRTFNLRTELPQFVS-YFQQRERWG-EDNHWICKPWNLARSLDTHVTKSLHSIIRH 441
             ++P TF +  +  +FV+ YFQ+R+  G + ++WICKP  L+R     +       I  
Sbjct: 175 YQFIPLTFVMPNDYTKFVAEYFQERQMLGTKHSYWICKPAELSRGRGILIFSDFKDFIF- 233

Query: 442 RESTPKVVSKYIESPVLFLREDVGKVKFDIRYIVLLRSVRPLRLFVYDVFWLRFSNRAFA 501
                 +V KYI +P+L     +G+ K D+R  V +   +PL ++VY    +RF+   F 
Sbjct: 234 --DDMYIVQKYISNPLL-----IGRYKCDLRIYVCVTGFKPLTIYVYQEGLVRFATEKFD 286

Query: 502 LNDLDDYEKHFT 513
           L++L +   H T
Sbjct: 287 LSNLQNNYAHLT 298


>gi|50658079 tubulin tyrosine ligase-like family, member 5 [Homo
           sapiens]
          Length = 1281

 Score = 56.2 bits (134), Expect = 9e-08
 Identities = 58/196 (29%), Positives = 93/196 (47%), Gaps = 22/196 (11%)

Query: 307 VYTDVQQVASSLT-HPRFTLTQSEADADILFNFSHFKDY--RKLSQERPGVLLNQFPCEN 363
           V TD + V S LT H    +  S  D ++++  SH K +  R LS+ +    +N FP   
Sbjct: 70  VRTDSRLVRSILTAHGFHEVHPSSTDYNLMWTGSHLKPFLLRTLSEAQK---VNHFPRSY 126

Query: 364 LLTVKDCL-ASIAR--RAGGPEGPPWLPRTFNLRTELPQFVSYFQQRERWGEDNHWICKP 420
            LT KD L  +I R     G +    LP+TF L  E  +F + + +     +   WI KP
Sbjct: 127 ELTRKDRLYKNIIRMQHTHGFKAFHILPQTFLLPAEYAEFCNSYSK-----DRGPWIVKP 181

Query: 421 WNLARSLDTHVTKSLHSIIRHRESTPKVVSKYIESPVLFLREDVGKVKFDIRYIVLLRSV 480
              +R    ++  + + I         +VS+YI +P+L     +   KFD+R  VL+ S 
Sbjct: 182 VASSRGRGVYLINNPNQISLEENI---LVSRYINNPLL-----IDDFKFDVRLYVLVTSY 233

Query: 481 RPLRLFVYDVFWLRFS 496
            PL +++Y+    RF+
Sbjct: 234 DPLVIYLYEEGLARFA 249


>gi|75677580 tubulin tyrosine ligase-like family, member 13 [Homo
           sapiens]
          Length = 459

 Score = 53.5 bits (127), Expect = 6e-07
 Identities = 47/163 (28%), Positives = 73/163 (44%), Gaps = 17/163 (10%)

Query: 356 LNQFPCENLLTVKDCLASIARRAGG--PEGPPWLPRTFNLRTELPQFVSYFQQRERWGED 413
           +N FP    +  KD LA    R     P      PRT+ L  +   F SY +QR+     
Sbjct: 141 INHFPGMTEICRKDLLARNLNRMYKLYPSEYNIFPRTWCLPADYGDFQSYGRQRKA---- 196

Query: 414 NHWICKPWNLARSLDTHVTKSLHSIIRHRESTPKVVSKYIESPVLFLREDVGKVKFDIRY 473
             +ICKP +  +     +T++   I   +     +  +YI  P+L     +   KFD+R 
Sbjct: 197 RTYICKPDSGCQGRGIFITRNPREI---KPGEHMICQQYISKPLL-----IDGFKFDMRV 248

Query: 474 IVLLRSVRPLRLFVYDVFWLRFSNRAF---ALNDLDDYEKHFT 513
            VL+ S  PLR+F Y+    RF+   +   + N+LD+   H T
Sbjct: 249 YVLITSCDPLRIFTYEEGLARFATTPYMEPSHNNLDNVCMHLT 291


>gi|195963418 tubulin tyrosine ligase-like family, member 6 isoform
           1 [Homo sapiens]
          Length = 891

 Score = 52.0 bits (123), Expect = 2e-06
 Identities = 44/163 (26%), Positives = 76/163 (46%), Gaps = 17/163 (10%)

Query: 356 LNQFPCENLLTVKDCLASIARRAGG--PEGPPWLPRTFNLRTELPQFVSYFQQRERWGED 413
           +N FP  + +  KD LA    R     P+   + PRT+ L  +     +Y + R+    +
Sbjct: 162 INHFPGMSEICRKDLLARNMSRMLKMFPKDFRFFPRTWCLPADWGDLQTYSRSRK----N 217

Query: 414 NHWICKPWNLARSLDTHVTKSLHSIIRHRESTPKVVSKYIESPVLFLREDVGKVKFDIRY 473
             +ICKP +  +     +T+++  I   +     +   YI  P +     +   KFD+R 
Sbjct: 218 KTYICKPDSGCQGKGIFITRTVKEI---KPGEDMICQLYISKPFI-----IDGFKFDLRI 269

Query: 474 IVLLRSVRPLRLFVYDVFWLRFSNRAFA---LNDLDDYEKHFT 513
            VL+ S  PLR+FVY+    RF+  +++    ++LDD   H T
Sbjct: 270 YVLVTSCDPLRIFVYNEGLARFATTSYSRPCTDNLDDICMHLT 312


>gi|94536793 tubulin tyrosine ligase-like family, member 7 [Homo
           sapiens]
          Length = 887

 Score = 50.4 bits (119), Expect = 5e-06
 Identities = 48/172 (27%), Positives = 76/172 (44%), Gaps = 18/172 (10%)

Query: 323 FTLTQSEADADILFNFSHFKDYRKLSQERPGVLLNQFPCENLLTVKDCLASIARRA--GG 380
           F  T  E +   L          K+S+ +    +N FP    +  KD LA    +     
Sbjct: 62  FMKTPDEDETSNLIWCDSAVQQEKISELQNYQRINHFPGMGEICRKDFLARNMTKMIKSR 121

Query: 381 PEGPPWLPRTFNLRTELPQFVSYFQQRERWGEDNHWICKPWNLARSLDTHVTKSLHSIIR 440
           P    ++PRT+    E  QF +Y ++ ++  +   +I KP N A            S+IR
Sbjct: 122 PLDYTFVPRTWIFPAEYTQFQNYVKELKKKRKQKTFIVKPANGAMGHGI-------SLIR 174

Query: 441 HRESTPK----VVSKYIESPVLFLREDVGKVKFDIRYIVLLRSVRPLRLFVY 488
           + +  P     +V +YIE P  FL E     KFD+R  +L+ S  PL++F+Y
Sbjct: 175 NGDKLPSQDHLIVQEYIEKP--FLMEGY---KFDLRIYILVTSCDPLKIFLY 221


>gi|11068135 tubulin tyrosine ligase-like family, member 1 [Homo
           sapiens]
          Length = 423

 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 48/190 (25%), Positives = 78/190 (41%), Gaps = 40/190 (21%)

Query: 355 LLNQFPCENLLTVKDCLASIARRAGGP---EGPP--------------WLPRTFNLRTEL 397
           ++N FP    LT KD +    +R       EG P              ++P T+ L  + 
Sbjct: 61  IVNHFPNHYELTRKDLMVKNIKRYRKELEKEGSPLAEKDENGKYLYLDFVPVTYMLPADY 120

Query: 398 PQFVSYFQQRERWGEDNHWICKPWNLARSLDTHVTKSLHSI------------IRHREST 445
             FV  F++       + WI KP   A+     +   L  I            +      
Sbjct: 121 NLFVEEFRK----SPSSTWIMKPCGKAQGKGIFLINKLSQIKKWSRDSKTSSFVSQSNKE 176

Query: 446 PKVVSKYIESPVLFLREDVGKVKFDIRYIVLLRSVRPLRLFVYDVFWLRFSNRAF--ALN 503
             V+S YI +P+L     +G  KFD+R  VL+ + RPLR ++Y + + RF    +  + +
Sbjct: 177 AYVISLYINNPLL-----IGGRKFDLRLYVLVSTYRPLRCYMYKLGFCRFCTVKYTPSTS 231

Query: 504 DLDDYEKHFT 513
           +LD+   H T
Sbjct: 232 ELDNMFVHLT 241


>gi|109134340 tubulin tyrosine ligase-like family, member 3 [Homo
           sapiens]
          Length = 772

 Score = 48.5 bits (114), Expect = 2e-05
 Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 12/118 (10%)

Query: 397 LPQFVSYFQQRERWGEDNHWICKPWNLARSLDTHVTKSLHSIIRHRESTPKV-------V 449
           L Q  +   Q +  G+ N WI KP   +R         L  +++     P V       V
Sbjct: 261 LQQLQAVVPQIDMEGDRNIWIVKPGAKSRGRGIMCMDHLEEMLKLVNGNPVVMKDGKWVV 320

Query: 450 SKYIESPVLFLREDVGKVKFDIRYIVLLRSVRPLRLFVYDVFWLRFSNRAFALNDLDD 507
            KYIE P+L         KFD+R   L+    PL ++ Y   ++RFS + F+L +LD+
Sbjct: 321 QKYIERPLLIFG-----TKFDLRQWFLVTDWNPLTVWFYRDSYIRFSTQPFSLKNLDN 373


>gi|217330594 tubulin tyrosine ligase-like family, member 4 [Homo
           sapiens]
          Length = 1199

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 59/252 (23%), Positives = 97/252 (38%), Gaps = 21/252 (8%)

Query: 269 SCTPEPPAEHYQAILEENKEKLPLDINPVVHPHGHIFKVYTDVQQVASSLTHPRFTLTQS 328
           S  P  P   Y    +E  EKLP +   ++      +K+ T    +    T  R     S
Sbjct: 578 SLFPNVPPTIYFGTRDERVEKLPWEQRKLLR-----WKMSTVTPNIVKQ-TIGRSHFKIS 631

Query: 329 EADADILFNFSHFKDYRKLSQERPGVLLNQFPCENLLTVKDCL---ASIARRAGGPEGPP 385
           + + D L  + H          R    LN FP    +  KD L    S  +   G +   
Sbjct: 632 KRNDDWLGCWGHHMKSPSFRSIREHQKLNHFPGSFQIGRKDRLWRNLSRMQSRFGKKEFS 691

Query: 386 WLPRTFNLRTELPQFVSYFQQRERWGEDNHWICKPWNLARSLDTHVTKSLHSIIRHREST 445
           + P++F L    PQ     ++         WI KP   AR +   V      + + R   
Sbjct: 692 FFPQSFIL----PQDAKLLRKAWESSSRQKWIVKPPASARGIGIQVIHKWSQLPKRR--- 744

Query: 446 PKVVSKYIESPVLFLREDVGKVKFDIRYIVLLRSVRPLRLFVYDVFWLRFSNRAFALNDL 505
           P +V +Y+  P L     +   KFD+R  V + S  PLR++++    +RF++  ++ +  
Sbjct: 745 PLLVQRYLHKPYL-----ISGSKFDLRIYVYVTSYDPLRIYLFSDGLVRFASCKYSPSMK 799

Query: 506 DDYEKHFTVMNY 517
               K   + NY
Sbjct: 800 SLGNKFMHLTNY 811


>gi|122937293 tubulin tyrosine ligase-like family, member 8 [Homo
           sapiens]
          Length = 834

 Score = 44.3 bits (103), Expect = 4e-04
 Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 5/59 (8%)

Query: 448 VVSKYIESPVLFLREDVGKVKFDIRYIVLLRSVRPLRLFVYDVFWLRFSNRAFALNDLD 506
           VV KYIE+P+L     +   KFDIR   L+    PL ++ Y   +LRFS + F+L+ LD
Sbjct: 374 VVQKYIETPLL-----ICDTKFDIRQWFLVTDWNPLTIWFYKESYLRFSTQRFSLDKLD 427


>gi|212720861 tubulin tyrosine ligase-like family, member 11 a [Homo
           sapiens]
          Length = 800

 Score = 43.9 bits (102), Expect = 5e-04
 Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 15/140 (10%)

Query: 356 LNQFPCENLLTVKDCLASIARRAGG--PEGPPWLPRTFNLRTELPQFVSYFQQRERWGED 413
           +N+FP    +  K  L+   R      PE   + PR++ L  E   FV+  Q  +   +D
Sbjct: 272 VNKFPGMTEMVRKITLSRAVRTMQNLFPEEYNFYPRSWILPDEFQLFVAQVQMVK--DDD 329

Query: 414 NHW----ICKPWNLARSLDTHVTKSLHSI--IRHRESTPKVVSKYIESPVLFLREDVGKV 467
             W    I KP    +    ++ K    I      +S P VV +YI  P+L     + K+
Sbjct: 330 PSWKPTFIVKPDGGCQGDGIYLIKDPSDIRLAGTLQSRPAVVQEYICKPLL-----IDKL 384

Query: 468 KFDIRYIVLLRSVRPLRLFV 487
           KFDIR  VLL+S+ PL +++
Sbjct: 385 KFDIRLYVLLKSLDPLEIYI 404


>gi|89363028 tubulin tyrosine ligase-like family, member 11 b [Homo
           sapiens]
          Length = 538

 Score = 43.9 bits (102), Expect = 5e-04
 Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 15/140 (10%)

Query: 356 LNQFPCENLLTVKDCLASIARRAGG--PEGPPWLPRTFNLRTELPQFVSYFQQRERWGED 413
           +N+FP    +  K  L+   R      PE   + PR++ L  E   FV+  Q  +   +D
Sbjct: 272 VNKFPGMTEMVRKITLSRAVRTMQNLFPEEYNFYPRSWILPDEFQLFVAQVQMVK--DDD 329

Query: 414 NHW----ICKPWNLARSLDTHVTKSLHSI--IRHRESTPKVVSKYIESPVLFLREDVGKV 467
             W    I KP    +    ++ K    I      +S P VV +YI  P+L     + K+
Sbjct: 330 PSWKPTFIVKPDGGCQGDGIYLIKDPSDIRLAGTLQSRPAVVQEYICKPLL-----IDKL 384

Query: 468 KFDIRYIVLLRSVRPLRLFV 487
           KFDIR  VLL+S+ PL +++
Sbjct: 385 KFDIRLYVLLKSLDPLEIYI 404


>gi|19923399 Ras-GTPase activating protein SH3 domain-binding
           protein 2 isoform a [Homo sapiens]
          Length = 482

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 5/50 (10%)

Query: 65  EVFGIMQVEEVEEEEDEAAREVRKQQPNPGNELCYKVIVTRESGLQAAHP 114
           EVFG  + E  EE EDE   E  ++QP+P       V     SG   AHP
Sbjct: 136 EVFGDSEPELDEESEDEVEEEQEERQPSP-----EPVQENANSGYYEAHP 180


>gi|45359849 Ras-GTPase activating protein SH3 domain-binding
           protein 2 isoform a [Homo sapiens]
          Length = 482

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 5/50 (10%)

Query: 65  EVFGIMQVEEVEEEEDEAAREVRKQQPNPGNELCYKVIVTRESGLQAAHP 114
           EVFG  + E  EE EDE   E  ++QP+P       V     SG   AHP
Sbjct: 136 EVFGDSEPELDEESEDEVEEEQEERQPSP-----EPVQENANSGYYEAHP 180


>gi|45359846 Ras-GTPase activating protein SH3 domain-binding
           protein 2 isoform b [Homo sapiens]
          Length = 449

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 5/50 (10%)

Query: 65  EVFGIMQVEEVEEEEDEAAREVRKQQPNPGNELCYKVIVTRESGLQAAHP 114
           EVFG  + E  EE EDE   E  ++QP+P       V     SG   AHP
Sbjct: 136 EVFGDSEPELDEESEDEVEEEQEERQPSP-----EPVQENANSGYYEAHP 180


>gi|33946297 zinc finger protein 326 isoform 1 [Homo sapiens]
          Length = 582

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 16/27 (59%), Positives = 20/27 (74%)

Query: 59  EVFDAGEVFGIMQVEEVEEEEDEAARE 85
           EV   GEV G+ +VEEVEE E+E A+E
Sbjct: 543 EVGVVGEVEGVGEVEEVEELEEETAKE 569


>gi|16904383 leucine rich repeat containing 7 [Homo sapiens]
          Length = 1537

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 5/83 (6%)

Query: 128 VEHARQQLQQVPGLLHRMANL----MGIEFHGELPSTEAVALVLEEMWKFNQTYQLAHGT 183
           +E     L+ +P  +H++A L    +G    GELP        L E+W  N   Q+  G+
Sbjct: 166 LELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVLPGS 225

Query: 184 AEEKMPVWYIMDEFGSRIQHADV 206
              K+ +   +D   +RI+  D+
Sbjct: 226 I-GKLKMLVYLDMSKNRIETVDM 247


>gi|6912398 general transcription factor IIIC, polypeptide 3, 102kDa
           [Homo sapiens]
          Length = 886

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 13/35 (37%), Positives = 21/35 (60%)

Query: 73  EEVEEEEDEAAREVRKQQPNPGNELCYKVIVTRES 107
           EE EEEE+E   E   +QP  G+    ++++ RE+
Sbjct: 98  EEEEEEEEEEEEEETPEQPTAGDVFVLEMVLNRET 132


>gi|142976783 PDZ domain containing RING finger 4 [Homo sapiens]
          Length = 778

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 9/72 (12%)

Query: 53  LHKLEHEVFDAGEVFGIM-----QVEEVEEEEDEAAREVRKQQPNPGNELCYKVIVTRES 107
           LH +EHE ++  E    +     + E+ E EE E  R     Q   G  +CY+     ++
Sbjct: 113 LHPMEHEFYEDNEYISSLPADADRTEDFEYEEVELCRV--SSQEKLGLTVCYRTDDEEDT 170

Query: 108 GLQAAH--PNSI 117
           G+  +   PNSI
Sbjct: 171 GIYVSEVDPNSI 182


>gi|145312251 EPH receptor A6 isoform a [Homo sapiens]
          Length = 1130

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 26/90 (28%), Positives = 33/90 (36%), Gaps = 18/90 (20%)

Query: 11  PAERSSPGQTPEEGAQALAEFAALHGPALRASGVPERYWGRLLHKLEHEVFDAGEVFGIM 70
           PA RSSP       ++A A      GP+    G   R  GR                G  
Sbjct: 7   PAARSSPAPQAASSSEAAAPATGQPGPSCPVPGTSRR--GRP---------------GTP 49

Query: 71  QVEEVEEEEDEAAREVRKQQPNPGNELCYK 100
               VEEEE+E   +V K  P+P    C +
Sbjct: 50  PAGRVEEEEEEEEEDVDK-DPHPTQNTCLR 78


>gi|209862789 microtubule associated monoxygenase, calponin and LIM
            domain containing 3 isoform 1 [Homo sapiens]
          Length = 2002

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 40/143 (27%), Positives = 57/143 (39%), Gaps = 24/143 (16%)

Query: 4    ERGPERRPAERSSPGQTPEEGAQALAEFAALHGPALRASGVPERYWGR---LLHKLEHEV 60
            + G E   A  SS  +  EEG +   E      P     GVP +   R   LL     E 
Sbjct: 924  DTGAEEDVASSSSESEMEEEGEEEEEEPRL---PPSDLGGVPWKEAVRIHALLKGKSEEE 980

Query: 61   FDAGEVFGI------MQVEEVEEEEDEAAREVRKQQPNPGNELCYKVIVTRESGLQAAHP 114
             +A + FG        + EE EEEE+E   E  ++    GN+   +V       + AA P
Sbjct: 981  LEASKSFGPGNEEEEEEEEEYEEEEEEDYDEEEEESSEAGNQRLQQV-------MHAADP 1033

Query: 115  NSIFLIDHAWTCRVEHARQQLQQ 137
              I   D  WT    H R++ ++
Sbjct: 1034 LEI-QADVHWT----HIREREEE 1051


>gi|40255047 pleckstrin homology domain containing, family H (with
           MyTH4 domain) member 3 [Homo sapiens]
          Length = 793

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 3/43 (6%)

Query: 351 RPGVLLNQF--PCENLLTVKDCL-ASIARRAGGPEGPPWLPRT 390
           RPG L+      C +L  ++D L   +A++  GP GPP LP T
Sbjct: 282 RPGPLMQGVLQTCRDLPALRDELFLQLAKQTSGPAGPPGLPAT 324


>gi|113426528 PREDICTED: similar to hCG2042536 [Homo sapiens]
          Length = 847

 Score = 29.6 bits (65), Expect = 9.0
 Identities = 19/42 (45%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 5   RGPERRPAERSSPGQTPEEGAQALAEFAALHGPALRASGVPE 46
           RG E RPA   +PGQ  E  AQ  AE   L   A  A G P+
Sbjct: 209 RGQEWRPAPGPAPGQGAEASAQGRAEEEGLPAKA-HADGEPK 249


>gi|113426210 PREDICTED: similar to hCG2042536 [Homo sapiens]
          Length = 847

 Score = 29.6 bits (65), Expect = 9.0
 Identities = 19/42 (45%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 5   RGPERRPAERSSPGQTPEEGAQALAEFAALHGPALRASGVPE 46
           RG E RPA   +PGQ  E  AQ  AE   L   A  A G P+
Sbjct: 209 RGQEWRPAPGPAPGQGAEASAQGRAEEEGLPAKA-HADGEPK 249


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.138    0.438 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,171,126
Number of Sequences: 37866
Number of extensions: 1364136
Number of successful extensions: 4449
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 4413
Number of HSP's gapped (non-prelim): 35
length of query: 644
length of database: 18,247,518
effective HSP length: 109
effective length of query: 535
effective length of database: 14,120,124
effective search space: 7554266340
effective search space used: 7554266340
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.