Guide to the Human Genome
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Name: G3BP2 Sequence: fasta or formatted (482aa) NCBI GI: 45359849
Description:

Ras-GTPase activating protein SH3 domain-binding protein 2 isoform a

Referenced in:

Ras

Other entries for this name:
alt mRNA [482aa] Ras-GTPase activating protein SH3 domain-binding protein 2 isoform a
alt prot [449aa] Ras-GTPase activating protein SH3 domain-binding protein 2 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.5         17           2
 C cysteine            0.2          1           1
 D aspartate           4.8         23           2
 E glutamate          12.0         58           3
 F phenylalanine       3.9         19           2
 G glycine             9.5         46           3
 H histidine           2.7         13           2
 I isoleucine          2.7         13           2
 K lysine              4.6         22           2
 L leucine             5.4         26           2
 M methionine          2.5         12           2
 N asparagine          4.4         21           1
 P proline            10.2         49           3
 Q glutamine           4.4         21           1
 R arginine            8.7         42           2
 S serine              6.8         33           3
 T threonine           3.3         16           2
 V valine              7.9         38           3
 W tryptophan          0.2          1           1
 Y tyrosine            2.3         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Ras-GTPase activating protein SH3 domain-binding pro... 
G3BP2                 1.000   Ras-GTPase activating protein SH3 domain-binding pro...
G3BP2                 0.914   Ras-GTPase activating protein SH3 domain-binding pro...
G3BP1                 0.572   Ras-GTPase-activating protein SH3-domain-binding prot...
G3BP1                 0.572   Ras-GTPase-activating protein SH3-domain-binding pro...
HNRNPA2B1             0.045   heterogeneous nuclear ribonucleoprotein A2/B1 isofor...
HNRNPA2B1             0.045   heterogeneous nuclear ribonucleoprotein A2/B1 isoform...
HNRNPA3               0.041   heterogeneous nuclear ribonucleoprotein A3 
HNRNPA1L2             0.040   heterogeneous nuclear ribonucleoprotein A1-like [Hom...
HNRNPA1L2             0.040   heterogeneous nuclear ribonucleoprotein A1-like [Hom...
HNRNPA1               0.038   heterogeneous nuclear ribonucleoprotein A1 isoform b...
HNRNPA1               0.038   heterogeneous nuclear ribonucleoprotein A1 isoform a ...
PELP1                 0.035   proline, glutamic acid and leucine rich protein 1 [...
HNRNPA0               0.035   heterogeneous nuclear ribonucleoprotein A0 
NEFM                  0.035   neurofilament, medium polypeptide 150kDa isoform 1 ...
NEFM                  0.035   neurofilament, medium polypeptide 150kDa isoform 2 ...
HNRNPD                0.034   heterogeneous nuclear ribonucleoprotein D isoform b ...
HNRNPD                0.034   heterogeneous nuclear ribonucleoprotein D isoform d ...
HNRNPAB               0.034   heterogeneous nuclear ribonucleoprotein A/B isoform ...
HNRNPAB               0.034   heterogeneous nuclear ribonucleoprotein A/B isoform ...
PNN                   0.033   pinin, desmosome associated protein 
HNRNPD                0.032   heterogeneous nuclear ribonucleoprotein D isoform a ...
HNRNPD                0.032   heterogeneous nuclear ribonucleoprotein D isoform c ...
SFPQ                  0.031   splicing factor proline/glutamine rich (polypyrimidin...
DAZAP1                0.031   DAZ associated protein 1 isoform a 
DAZAP1                0.031   DAZ associated protein 1 isoform b 
MLL2                  0.031   myeloid/lymphoid or mixed-lineage leukemia 2 
HNRPDL                0.030   heterogeneous nuclear ribonucleoprotein D-like [Homo...
SRRM1                 0.029   serine/arginine repetitive matrix 1 
LOC120364             0.028   PREDICTED: similar to heterogeneous nuclear ribonuc...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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