Guide to the Human Genome
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Name: PLEKHH3 Sequence: fasta or formatted (793aa) NCBI GI: 40255047
Description:

pleckstrin homology domain containing, family H (with MyTH4 domain) member 3

Referenced in:

Inositol Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.7         85           3
 C cysteine            2.3         18           2
 D aspartate           4.0         32           2
 E glutamate           6.9         55           2
 F phenylalanine       1.8         14           1
 G glycine            10.6         84           4
 H histidine           1.9         15           1
 I isoleucine          1.5         12           1
 K lysine              1.5         12           1
 L leucine            14.6        116           3
 M methionine          1.0          8           1
 N asparagine          0.8          6           1
 P proline            10.1         80           4
 Q glutamine           4.2         33           1
 R arginine            9.8         78           3
 S serine              6.6         52           4
 T threonine           4.3         34           2
 V valine              4.2         33           2
 W tryptophan          1.6         13           2
 Y tyrosine            1.6         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pleckstrin homology domain containing, family H (wit... 
MYO10                 0.259   myosin X 
PLEKHH1               0.033   pleckstrin homology domain containing, family H (wit...
PLEKHH2               0.027   pleckstrin homology domain containing, family H (wi...
MYO7A                 0.019   myosin VIIA isoform 2 
MYO7A                 0.019   myosin VIIA isoform 1 
MYO7B                 0.013   myosin VIIB 
LOC100292745          0.013   PREDICTED: hypothetical protein 
LOC100290074          0.013   PREDICTED: hypothetical protein XP_002346855 
LOC100287034          0.013   PREDICTED: hypothetical protein XP_002342693 
LOC645321             0.012   PREDICTED: hypothetical protein 
LOC645321             0.012   PREDICTED: hypothetical protein 
HCN2                  0.011   hyperpolarization activated cyclic nucleotide-gated...
MYO15A                0.011   myosin XV 
LOC100130506          0.011   PREDICTED: hypothetical protein 
LOC100288911          0.011   PREDICTED: hypothetical protein XP_002342241 
FZD8                  0.011   frizzled 8 
IRX5                  0.011   iroquois homeobox protein 5 
SCRT2                 0.011   scratch 2 protein 
VCPIP1                0.011   valosin containing protein (p97)/p47 complex interac...
MLL2                  0.010   myeloid/lymphoid or mixed-lineage leukemia 2 
PTPN23                0.010   protein tyrosine phosphatase, non-receptor type 23 [...
ARHGEF15              0.010   Rho guanine exchange factor 15 
LOC100289408          0.010   PREDICTED: hypothetical protein 
LOC100289408          0.010   PREDICTED: hypothetical protein XP_002344217 
SYNJ1                 0.009   synaptojanin 1 isoform a 
SYNJ1                 0.009   synaptojanin 1 isoform b 
FOXK1                 0.009   forkhead box K1 
LOC283999             0.009   hypothetical protein LOC283999 
LOC100292183          0.009   PREDICTED: hypothetical protein isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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