Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ZFPM2 Sequence: fasta or formatted (1151aa) NCBI GI: 223890230
Description:

zinc finger protein, multitype 2

Referenced in:

Hematopoiesis and Erythrocytes
Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         63           2
 C cysteine            3.4         39           1
 D aspartate           4.9         56           2
 E glutamate           7.4         85           4
 F phenylalanine       3.4         39           1
 G glycine             4.9         56           2
 H histidine           3.0         35           1
 I isoleucine          4.2         48           2
 K lysine              6.8         78           2
 L leucine             8.0         92           2
 M methionine          2.0         23           1
 N asparagine          5.7         66           3
 P proline             7.6         88           2
 Q glutamine           6.1         70           2
 R arginine            3.8         44           2
 S serine             10.4        120           3
 T threonine           5.6         65           3
 V valine              4.3         50           2
 W tryptophan          0.7          8           1
 Y tyrosine            2.3         26           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein, multitype 2 
ZFPM1                 0.151   zinc finger protein, multitype 1 
ZNF8                  0.016   zinc finger protein 8 
ZNF852                0.015   PREDICTED: zinc finger protein 852 
ZNF852                0.015   PREDICTED: zinc finger protein 852 
ZNF852                0.015   PREDICTED: zinc finger protein 852 
ZNF57                 0.015   zinc finger protein 57 
ZNF434                0.015   zinc finger protein 434 
ZNF408                0.015   zinc finger protein 408 
ZNF780B               0.014   zinc finger protein 780B 
ZNF691                0.014   zinc finger protein 691 
ZNF500                0.014   zinc finger protein 500 
ZNF132                0.014   zinc finger protein 132 
ZFAT                  0.014   zinc finger protein 406 isoform ZFAT-1 
ZNF501                0.014   zinc finger protein 501 
ZNF407                0.013   zinc finger protein 407 isoform 2 
ZNF407                0.013   zinc finger protein 407 isoform 1 
ZFP28                 0.013   zinc finger protein 28 
ZNF425                0.013   zinc finger protein 425 
ZNF827                0.013   zinc finger protein 827 
ZNF236                0.013   zinc finger protein 236 
ZNF157                0.013   zinc finger protein 157 
ZFP112                0.013   zinc finger protein 228 isoform 1 
ZFP112                0.013   zinc finger protein 228 isoform 2 
ZNF768                0.013   zinc finger protein 768 
ZSCAN10               0.013   zinc finger and SCAN domain containing 10 
ZNF646                0.013   zinc finger protein 646 
ZNF16                 0.012   zinc finger protein 16 
ZNF16                 0.012   zinc finger protein 16 
ZNF616                0.012   zinc finger protein 616 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press