Guide to the Human Genome
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Name: CRTC3 Sequence: fasta or formatted (619aa) NCBI GI: 110431354
Description:

transducer of regulated CREB protein 3 isoform a

Referenced in:

CREB / ATF Family

Other entries for this name:
alt prot [618aa] transducer of regulated CREB protein 3 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         38           2
 C cysteine            0.5          3           1
 D aspartate           4.0         25           1
 E glutamate           4.4         27           3
 F phenylalanine       4.2         26           2
 G glycine             7.1         44           4
 H histidine           3.1         19           2
 I isoleucine          1.1          7           1
 K lysine              2.1         13           1
 L leucine            12.0         74           2
 M methionine          1.5          9           1
 N asparagine          5.2         32           2
 P proline            11.3         70           4
 Q glutamine           7.8         48           2
 R arginine            5.3         33           3
 S serine             13.9         86           3
 T threonine           5.3         33           2
 V valine              3.2         20           1
 W tryptophan          0.6          4           1
 Y tyrosine            1.3          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transducer of regulated CREB protein 3 isoform a [H... 
CRTC3                 0.995   transducer of regulated CREB protein 3 isoform b [H...
CRTC2                 0.256   CREB regulated transcription coactivator 2 
CRTC1                 0.210   mucoepidermoid carcinoma translocated 1 isoform 1 [...
CRTC1                 0.205   mucoepidermoid carcinoma translocated 1 isoform 3 [...
FLJ22184              0.023   PREDICTED: hypothetical protein FLJ22184 
F5                    0.022   coagulation factor V precursor 
FLJ22184              0.022   PREDICTED: hypothetical protein LOC80164 
BRD4                  0.021   bromodomain-containing protein 4 isoform long 
FLJ22184              0.020   PREDICTED: hypothetical protein FLJ22184 
MLL2                  0.020   myeloid/lymphoid or mixed-lineage leukemia 2 
LOC100292848          0.020   PREDICTED: hypothetical protein 
ARID1A                0.020   AT rich interactive domain 1A isoform a 
ARID1A                0.020   AT rich interactive domain 1A isoform b 
EP300                 0.020   E1A binding protein p300 
COL27A1               0.019   collagen, type XXVII, alpha 1 
TANC2                 0.018   tetratricopeptide repeat, ankyrin repeat and coiled...
LOC100287587          0.018   PREDICTED: hypothetical protein XP_002343392 
ATN1                  0.018   atrophin-1 
ATN1                  0.018   atrophin-1 
LOC100289782          0.017   PREDICTED: hypothetical protein XP_002347588 
TULP4                 0.016   tubby like protein 4 isoform 1 
UBN2                  0.016   ubinuclein 2 
CIC                   0.016   capicua homolog 
LOC100134663          0.016   PREDICTED: hypothetical protein, partial 
MDC1                  0.015   mediator of DNA-damage checkpoint 1 
HELZ                  0.015   helicase with zinc finger domain 
SEC24B                0.015   SEC24 (S. cerevisiae) homolog B isoform a 
SELV                  0.015   selenoprotein V 
SYNJ1                 0.015   synaptojanin 1 isoform d 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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