NCBP2 622

Name: NCBP2	Sequence: fasta or formatted (103aa)		NCBI GI: 110349727
Description: nuclear cap binding protein subunit 2, 20kDa isoform 2		Referenced in: Capping and Splicing
Other entries for this name: alt prot [156aa] nuclear cap binding protein subunit 2, 20kDa isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.8 6 1 C cysteine 0.0 0 0 D aspartate 9.7 10 2 E glutamate 6.8 7 2 F phenylalanine 1.9 2 1 G glycine 13.6 14 2 H histidine 1.0 1 1 I isoleucine 2.9 3 2 K lysine 5.8 6 2 L leucine 7.8 8 2 M methionine 1.9 2 1 N asparagine 3.9 4 1 P proline 0.0 0 0 Q glutamine 7.8 8 1 R arginine 12.6 13 1 S serine 5.8 6 1 T threonine 1.9 2 1 V valine 1.9 2 1 W tryptophan 1.0 1 1 Y tyrosine 7.8 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 nuclear cap binding protein subunit 2, 20kDa isofor... NCBP2 0.836 nuclear cap binding protein subunit 2, 20kDa isoform... LOC100293607 0.418 PREDICTED: similar to Nuclear cap-binding protein s... RBM3 0.048 RNA binding motif protein 3 SFRS4 0.032 splicing factor, arginine/serine-rich 4 ZFP28 0.026 zinc finger protein 28 EIF4H 0.026 eukaryotic translation initiation factor 4H isoform ... ACBD3 0.026 acyl-Coenzyme A binding domain containing 3 TAF15 0.026 TBP-associated factor 15 isoform 2 TAF15 0.026 TBP-associated factor 15 isoform 1 FAM98B 0.026 family with sequence similarity 98, member B isofor... CIRBP 0.016 cold inducible RNA binding protein DDX5 0.016 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 POLR1A 0.011 DNA-directed RNA polymerase I A TRA2B 0.011 splicing factor, arginine/serine-rich 10 MAP7 0.011 microtubule-associated protein 7 TRA2A 0.005 transformer-2 alpha LOC440577 0.005 PREDICTED: similar to nucleophosmin 1 LOC440577 0.005 PREDICTED: similar to nucleophosmin 1 LOC440577 0.005 PREDICTED: similar to nucleophosmin 1 INHBC 0.005 inhibin beta C chain preproprotein TSHZ2 0.005 teashirt zinc finger homeobox 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.