Guide to the Human Genome
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Name: ZFP28 Sequence: fasta or formatted (868aa) NCBI GI: 22094125
Description:

zinc finger protein 28

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         47           2
 C cysteine            4.4         38           1
 D aspartate           3.1         27           2
 E glutamate           6.9         60           2
 F phenylalanine       4.0         35           1
 G glycine             7.0         61           1
 H histidine           5.5         48           2
 I isoleucine          3.5         30           1
 K lysine              9.3         81           2
 L leucine             6.7         58           2
 M methionine          0.7          6           1
 N asparagine          3.2         28           2
 P proline             5.2         45           1
 Q glutamine           5.3         46           2
 R arginine            6.7         58           2
 S serine              8.3         72           3
 T threonine           6.3         55           2
 V valine              4.1         36           2
 W tryptophan          1.4         12           1
 Y tyrosine            2.9         25           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 28 
ZNF470                0.421   zinc finger protein 470 
ZNF471                0.400   zinc finger protein 471 
ZNF347                0.353   zinc finger protein 347 
ZNF160                0.338   zinc finger protein 160 
ZNF160                0.338   zinc finger protein 160 
ZNF160                0.338   zinc finger protein 160 
ZNF420                0.338   zinc finger protein 420 
ZNF569                0.331   zinc finger protein 569 
ZNF184                0.329   zinc finger protein 184 
ZNF624                0.325   zinc finger protein 624 
ZNF135                0.320   zinc finger protein 135 
ZNF780B               0.314   zinc finger protein 780B 
ZNF33A                0.310   zinc finger protein 33A isoform a 
LOC100287429          0.309   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.309   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.309   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.309   zinc finger protein 84 
ZNF84                 0.309   zinc finger protein 84 
ZNF616                0.308   zinc finger protein 616 
ZNF665                0.307   zinc finger protein 665 
ZNF568                0.304   zinc finger protein 568 
ZNF484                0.304   zinc finger protein 484 isoform a 
ZNF836                0.303   zinc finger protein 836 
ZNF546                0.300   zinc finger protein 546 
ZNF658                0.300   zinc finger protein 658 
ZNF780A               0.300   zinc finger protein 780A isoform b 
ZNF780A               0.300   zinc finger protein 780A isoform b 
ZNF780A               0.298   zinc finger protein 780A isoform a 
ZNF583                0.298   zinc finger protein 583 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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