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Search of human proteins with 156139122
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|156139122 CXXC finger 6 [Homo sapiens]
(2136 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|156139122 CXXC finger 6 [Homo sapiens] 4322 0.0
gi|187761317 tet oncogene family member 2 isoform a [Homo sapiens] 523 e-148
gi|149944516 tet oncogene family member 3 [Homo sapiens] 507 e-143
gi|158261990 CXXC finger 5 [Homo sapiens] 87 2e-16
gi|13376816 CXXC finger 4 [Homo sapiens] 86 4e-16
gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [... 50 2e-05
gi|156142182 CXXC finger 1 (PHD domain) isoform 1 [Homo sapiens] 49 4e-05
gi|156142180 CXXC finger 1 (PHD domain) isoform 2 [Homo sapiens] 49 4e-05
gi|195927037 DNA (cytosine-5-)-methyltransferase 1 isoform a [Ho... 47 2e-04
gi|4503351 DNA (cytosine-5-)-methyltransferase 1 isoform b [Homo... 47 2e-04
gi|197276602 microtubule-associated protein 4 isoform 5 [Homo sa... 47 3e-04
gi|197276600 microtubule-associated protein 4 isoform 4 [Homo sa... 47 3e-04
gi|47519675 microtubule-associated protein 4 isoform 2 [Homo sap... 47 3e-04
gi|47519639 microtubule-associated protein 4 isoform 1 [Homo sap... 47 3e-04
gi|148806928 hypothetical protein LOC57482 [Homo sapiens] 45 8e-04
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 45 8e-04
gi|116284392 mucin 2 precursor [Homo sapiens] 44 0.001
gi|91982772 mucin 17 [Homo sapiens] 44 0.002
gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo sap... 44 0.002
gi|222418647 mucin 7, secreted precursor [Homo sapiens] 42 0.006
gi|222418649 mucin 7, secreted precursor [Homo sapiens] 42 0.006
gi|222418645 mucin 7, secreted precursor [Homo sapiens] 42 0.006
gi|195963316 PWWP domain containing 2A isoform b [Homo sapiens] 42 0.006
gi|21464115 methyl-CpG binding domain protein 1 isoform 2 [Homo ... 42 0.008
gi|21464119 methyl-CpG binding domain protein 1 isoform PCM1 [Ho... 42 0.008
gi|21464117 methyl-CpG binding domain protein 1 isoform 1 [Homo ... 42 0.008
gi|239743291 PREDICTED: mucin 3A, intestinal [Homo sapiens] 41 0.011
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 41 0.011
gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sap... 41 0.014
gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sap... 41 0.014
>gi|156139122 CXXC finger 6 [Homo sapiens]
Length = 2136
Score = 4322 bits (11210), Expect = 0.0
Identities = 2136/2136 (100%), Positives = 2136/2136 (100%)
Query: 1 MSRSRHARPSRLVRKEDVNKKKKNSQLRKTTKGANKNVASVKTLSPGKLKQLIQERDVKK 60
MSRSRHARPSRLVRKEDVNKKKKNSQLRKTTKGANKNVASVKTLSPGKLKQLIQERDVKK
Sbjct: 1 MSRSRHARPSRLVRKEDVNKKKKNSQLRKTTKGANKNVASVKTLSPGKLKQLIQERDVKK 60
Query: 61 KTEPKPPVPVRSLLTRAGAARMNLDRTEVLFQNPESLTCNGFTMALRSTSLSRRLSQPPL 120
KTEPKPPVPVRSLLTRAGAARMNLDRTEVLFQNPESLTCNGFTMALRSTSLSRRLSQPPL
Sbjct: 61 KTEPKPPVPVRSLLTRAGAARMNLDRTEVLFQNPESLTCNGFTMALRSTSLSRRLSQPPL 120
Query: 121 VVAKSKKVPLSKGLEKQHDCDYKILPALGVKHSENDSVPMQDTQVLPDIETLIGVQNPSL 180
VVAKSKKVPLSKGLEKQHDCDYKILPALGVKHSENDSVPMQDTQVLPDIETLIGVQNPSL
Sbjct: 121 VVAKSKKVPLSKGLEKQHDCDYKILPALGVKHSENDSVPMQDTQVLPDIETLIGVQNPSL 180
Query: 181 LKGKSQETTQFWSQRVEDSKINIPTHSGPAAEILPGPLEGTRCGEGLFSEETLNDTSGSP 240
LKGKSQETTQFWSQRVEDSKINIPTHSGPAAEILPGPLEGTRCGEGLFSEETLNDTSGSP
Sbjct: 181 LKGKSQETTQFWSQRVEDSKINIPTHSGPAAEILPGPLEGTRCGEGLFSEETLNDTSGSP 240
Query: 241 KMFAQDTVCAPFPQRATPKVTSQGNPSIQLEELGSRVESLKLSDSYLDPIKSEHDCYPTS 300
KMFAQDTVCAPFPQRATPKVTSQGNPSIQLEELGSRVESLKLSDSYLDPIKSEHDCYPTS
Sbjct: 241 KMFAQDTVCAPFPQRATPKVTSQGNPSIQLEELGSRVESLKLSDSYLDPIKSEHDCYPTS 300
Query: 301 SLNKVIPDLNLRNCLALGGSTSPTSVIKFLLAGSKQATLGAKPDHQEAFEATANQQEVSD 360
SLNKVIPDLNLRNCLALGGSTSPTSVIKFLLAGSKQATLGAKPDHQEAFEATANQQEVSD
Sbjct: 301 SLNKVIPDLNLRNCLALGGSTSPTSVIKFLLAGSKQATLGAKPDHQEAFEATANQQEVSD 360
Query: 361 TTSFLGQAFGAIPHQWELPGADPVHGEALGETPDLPEIPGAIPVQGEVFGTILDQQETLG 420
TTSFLGQAFGAIPHQWELPGADPVHGEALGETPDLPEIPGAIPVQGEVFGTILDQQETLG
Sbjct: 361 TTSFLGQAFGAIPHQWELPGADPVHGEALGETPDLPEIPGAIPVQGEVFGTILDQQETLG 420
Query: 421 MSGSVVPDLPVFLPVPPNPIATFNAPSKWPEPQSTVSYGLAVQGAIQILPLGSGHTPQSS 480
MSGSVVPDLPVFLPVPPNPIATFNAPSKWPEPQSTVSYGLAVQGAIQILPLGSGHTPQSS
Sbjct: 421 MSGSVVPDLPVFLPVPPNPIATFNAPSKWPEPQSTVSYGLAVQGAIQILPLGSGHTPQSS 480
Query: 481 SNSEKNSLPPVMAISNVENEKQVHISFLPANTQGFPLAPERGLFHASLGIAQLSQAGPSK 540
SNSEKNSLPPVMAISNVENEKQVHISFLPANTQGFPLAPERGLFHASLGIAQLSQAGPSK
Sbjct: 481 SNSEKNSLPPVMAISNVENEKQVHISFLPANTQGFPLAPERGLFHASLGIAQLSQAGPSK 540
Query: 541 SDRGSSQVSVTSTVHVVNTTVVTMPVPMVSTSSSSYTTLLPTLEKKKRKRCGVCEPCQQK 600
SDRGSSQVSVTSTVHVVNTTVVTMPVPMVSTSSSSYTTLLPTLEKKKRKRCGVCEPCQQK
Sbjct: 541 SDRGSSQVSVTSTVHVVNTTVVTMPVPMVSTSSSSYTTLLPTLEKKKRKRCGVCEPCQQK 600
Query: 601 TNCGECTYCKNRKNSHQICKKRKCEELKKKPSVVVPLEVIKENKRPQREKKPKVLKADFD 660
TNCGECTYCKNRKNSHQICKKRKCEELKKKPSVVVPLEVIKENKRPQREKKPKVLKADFD
Sbjct: 601 TNCGECTYCKNRKNSHQICKKRKCEELKKKPSVVVPLEVIKENKRPQREKKPKVLKADFD 660
Query: 661 NKPVNGPKSESMDYSRCGHGEEQKLELNPHTVENVTKNEDSMTGIEVEKWTQNKKSQLTD 720
NKPVNGPKSESMDYSRCGHGEEQKLELNPHTVENVTKNEDSMTGIEVEKWTQNKKSQLTD
Sbjct: 661 NKPVNGPKSESMDYSRCGHGEEQKLELNPHTVENVTKNEDSMTGIEVEKWTQNKKSQLTD 720
Query: 721 HVKGDFSANVPEAEKSKNSEVDKKRTKSPKLFVQTVRNGIKHVHCLPAETNVSFKKFNIE 780
HVKGDFSANVPEAEKSKNSEVDKKRTKSPKLFVQTVRNGIKHVHCLPAETNVSFKKFNIE
Sbjct: 721 HVKGDFSANVPEAEKSKNSEVDKKRTKSPKLFVQTVRNGIKHVHCLPAETNVSFKKFNIE 780
Query: 781 EFGKTLENNSYKFLKDTANHKNAMSSVATDMSCDHLKGRSNVLVFQQPGFNCSSIPHSSH 840
EFGKTLENNSYKFLKDTANHKNAMSSVATDMSCDHLKGRSNVLVFQQPGFNCSSIPHSSH
Sbjct: 781 EFGKTLENNSYKFLKDTANHKNAMSSVATDMSCDHLKGRSNVLVFQQPGFNCSSIPHSSH 840
Query: 841 SIINHHASIHNEGDQPKTPENIPSKEPKDGSPVQPSLLSLMKDRRLTLEQVVAIEALTQL 900
SIINHHASIHNEGDQPKTPENIPSKEPKDGSPVQPSLLSLMKDRRLTLEQVVAIEALTQL
Sbjct: 841 SIINHHASIHNEGDQPKTPENIPSKEPKDGSPVQPSLLSLMKDRRLTLEQVVAIEALTQL 900
Query: 901 SEAPSENSSPSKSEKDEESEQRTASLLNSCKAILYTVRKDLQDPNLQGEPPKLNHCPSLE 960
SEAPSENSSPSKSEKDEESEQRTASLLNSCKAILYTVRKDLQDPNLQGEPPKLNHCPSLE
Sbjct: 901 SEAPSENSSPSKSEKDEESEQRTASLLNSCKAILYTVRKDLQDPNLQGEPPKLNHCPSLE 960
Query: 961 KQSSCNTVVFNGQTTTLSNSHINSATNQASTKSHEYSKVTNSLSLFIPKSNSSKIDTNKS 1020
KQSSCNTVVFNGQTTTLSNSHINSATNQASTKSHEYSKVTNSLSLFIPKSNSSKIDTNKS
Sbjct: 961 KQSSCNTVVFNGQTTTLSNSHINSATNQASTKSHEYSKVTNSLSLFIPKSNSSKIDTNKS 1020
Query: 1021 IAQGIITLDNCSNDLHQLPPRNNEVEYCNQLLDSSKKLDSDDLSCQDATHTQIEEDVATQ 1080
IAQGIITLDNCSNDLHQLPPRNNEVEYCNQLLDSSKKLDSDDLSCQDATHTQIEEDVATQ
Sbjct: 1021 IAQGIITLDNCSNDLHQLPPRNNEVEYCNQLLDSSKKLDSDDLSCQDATHTQIEEDVATQ 1080
Query: 1081 LTQLASIIKINYIKPEDKKVESTPTSLVTCNVQQKYNQEKGTIQQKPPSSVHNNHGSSLT 1140
LTQLASIIKINYIKPEDKKVESTPTSLVTCNVQQKYNQEKGTIQQKPPSSVHNNHGSSLT
Sbjct: 1081 LTQLASIIKINYIKPEDKKVESTPTSLVTCNVQQKYNQEKGTIQQKPPSSVHNNHGSSLT 1140
Query: 1141 KQKNPTQKKTKSTPSRDRRKKKPTVVSYQENDRQKWEKLSYMYGTICDIWIASKFQNFGQ 1200
KQKNPTQKKTKSTPSRDRRKKKPTVVSYQENDRQKWEKLSYMYGTICDIWIASKFQNFGQ
Sbjct: 1141 KQKNPTQKKTKSTPSRDRRKKKPTVVSYQENDRQKWEKLSYMYGTICDIWIASKFQNFGQ 1200
Query: 1201 FCPHDFPTVFGKISSSTKIWKPLAQTRSIMQPKTVFPPLTQIKLQRYPESAEEKVKVEPL 1260
FCPHDFPTVFGKISSSTKIWKPLAQTRSIMQPKTVFPPLTQIKLQRYPESAEEKVKVEPL
Sbjct: 1201 FCPHDFPTVFGKISSSTKIWKPLAQTRSIMQPKTVFPPLTQIKLQRYPESAEEKVKVEPL 1260
Query: 1261 DSLSLFHLKTESNGKAFTDKAYNSQVQLTVNANQKAHPLTQPSSPPNQCANVMAGDDQIR 1320
DSLSLFHLKTESNGKAFTDKAYNSQVQLTVNANQKAHPLTQPSSPPNQCANVMAGDDQIR
Sbjct: 1261 DSLSLFHLKTESNGKAFTDKAYNSQVQLTVNANQKAHPLTQPSSPPNQCANVMAGDDQIR 1320
Query: 1321 FQQVVKEQLMHQRLPTLPGISHETPLPESALTLRNVNVVCSGGITVVSTKSEEEVCSSSF 1380
FQQVVKEQLMHQRLPTLPGISHETPLPESALTLRNVNVVCSGGITVVSTKSEEEVCSSSF
Sbjct: 1321 FQQVVKEQLMHQRLPTLPGISHETPLPESALTLRNVNVVCSGGITVVSTKSEEEVCSSSF 1380
Query: 1381 GTSEFSTVDSAQKNFNDYAMNFFTNPTKNLVSITKDSELPTCSCLDRVIQKDKGPYYTHL 1440
GTSEFSTVDSAQKNFNDYAMNFFTNPTKNLVSITKDSELPTCSCLDRVIQKDKGPYYTHL
Sbjct: 1381 GTSEFSTVDSAQKNFNDYAMNFFTNPTKNLVSITKDSELPTCSCLDRVIQKDKGPYYTHL 1440
Query: 1441 GAGPSVAAVREIMENRYGQKGNAIRIEIVVYTGKEGKSSHGCPIAKWVLRRSSDEEKVLC 1500
GAGPSVAAVREIMENRYGQKGNAIRIEIVVYTGKEGKSSHGCPIAKWVLRRSSDEEKVLC
Sbjct: 1441 GAGPSVAAVREIMENRYGQKGNAIRIEIVVYTGKEGKSSHGCPIAKWVLRRSSDEEKVLC 1500
Query: 1501 LVRQRTGHHCPTAVMVVLIMVWDGIPLPMADRLYTELTENLKSYNGHPTDRRCTLNENRT 1560
LVRQRTGHHCPTAVMVVLIMVWDGIPLPMADRLYTELTENLKSYNGHPTDRRCTLNENRT
Sbjct: 1501 LVRQRTGHHCPTAVMVVLIMVWDGIPLPMADRLYTELTENLKSYNGHPTDRRCTLNENRT 1560
Query: 1561 CTCQGIDPETCGASFSFGCSWSMYFNGCKFGRSPSPRRFRIDPSSPLHEKNLEDNLQSLA 1620
CTCQGIDPETCGASFSFGCSWSMYFNGCKFGRSPSPRRFRIDPSSPLHEKNLEDNLQSLA
Sbjct: 1561 CTCQGIDPETCGASFSFGCSWSMYFNGCKFGRSPSPRRFRIDPSSPLHEKNLEDNLQSLA 1620
Query: 1621 TRLAPIYKQYAPVAYQNQVEYENVARECRLGSKEGRPFSGVTACLDFCAHPHRDIHNMNN 1680
TRLAPIYKQYAPVAYQNQVEYENVARECRLGSKEGRPFSGVTACLDFCAHPHRDIHNMNN
Sbjct: 1621 TRLAPIYKQYAPVAYQNQVEYENVARECRLGSKEGRPFSGVTACLDFCAHPHRDIHNMNN 1680
Query: 1681 GSTVVCTLTREDNRSLGVIPQDEQLHVLPLYKLSDTDEFGSKEGMEAKIKSGAIEVLAPR 1740
GSTVVCTLTREDNRSLGVIPQDEQLHVLPLYKLSDTDEFGSKEGMEAKIKSGAIEVLAPR
Sbjct: 1681 GSTVVCTLTREDNRSLGVIPQDEQLHVLPLYKLSDTDEFGSKEGMEAKIKSGAIEVLAPR 1740
Query: 1741 RKKRTCFTQPVPRSGKKRAAMMTEVLAHKIRAVEKKPIPRIKRKNNSTTTNNSKPSSLPT 1800
RKKRTCFTQPVPRSGKKRAAMMTEVLAHKIRAVEKKPIPRIKRKNNSTTTNNSKPSSLPT
Sbjct: 1741 RKKRTCFTQPVPRSGKKRAAMMTEVLAHKIRAVEKKPIPRIKRKNNSTTTNNSKPSSLPT 1800
Query: 1801 LGSNTETVQPEVKSETEPHFILKSSDNTKTYSLMPSAPHPVKEASPGFSWSPKTASATPA 1860
LGSNTETVQPEVKSETEPHFILKSSDNTKTYSLMPSAPHPVKEASPGFSWSPKTASATPA
Sbjct: 1801 LGSNTETVQPEVKSETEPHFILKSSDNTKTYSLMPSAPHPVKEASPGFSWSPKTASATPA 1860
Query: 1861 PLKNDATASCGFSERSSTPHCTMPSGRLSGANAAAADGPGISQLGEVAPLPTLSAPVMEP 1920
PLKNDATASCGFSERSSTPHCTMPSGRLSGANAAAADGPGISQLGEVAPLPTLSAPVMEP
Sbjct: 1861 PLKNDATASCGFSERSSTPHCTMPSGRLSGANAAAADGPGISQLGEVAPLPTLSAPVMEP 1920
Query: 1921 LINSEPSTGVTEPLTPHQPNHQPSFLTSPQDLASSPMEEDEQHSEADEPPSDEPLSDDPL 1980
LINSEPSTGVTEPLTPHQPNHQPSFLTSPQDLASSPMEEDEQHSEADEPPSDEPLSDDPL
Sbjct: 1921 LINSEPSTGVTEPLTPHQPNHQPSFLTSPQDLASSPMEEDEQHSEADEPPSDEPLSDDPL 1980
Query: 1981 SPAEEKLPHIDEYWSDSEHIFLDANIGGVAIAPAHGSVLIECARRELHATTPVEHPNRNH 2040
SPAEEKLPHIDEYWSDSEHIFLDANIGGVAIAPAHGSVLIECARRELHATTPVEHPNRNH
Sbjct: 1981 SPAEEKLPHIDEYWSDSEHIFLDANIGGVAIAPAHGSVLIECARRELHATTPVEHPNRNH 2040
Query: 2041 PTRLSLVFYQHKNLNKPQHGFELNKIKFEAKEAKNKKMKASEQKDQAANEGPEQSSEVNE 2100
PTRLSLVFYQHKNLNKPQHGFELNKIKFEAKEAKNKKMKASEQKDQAANEGPEQSSEVNE
Sbjct: 2041 PTRLSLVFYQHKNLNKPQHGFELNKIKFEAKEAKNKKMKASEQKDQAANEGPEQSSEVNE 2100
Query: 2101 LNQIPSHKALTLTHDNVVTVSPYALTHVAGPYNHWV 2136
LNQIPSHKALTLTHDNVVTVSPYALTHVAGPYNHWV
Sbjct: 2101 LNQIPSHKALTLTHDNVVTVSPYALTHVAGPYNHWV 2136
>gi|187761317 tet oncogene family member 2 isoform a [Homo sapiens]
Length = 2002
Score = 523 bits (1347), Expect = e-148
Identities = 304/687 (44%), Positives = 401/687 (58%), Gaps = 41/687 (5%)
Query: 1293 NQKAHPLTQPSSPPNQCANVMAGDDQIRFQQVVKEQLMHQRLPTLPGISHETPLPESALT 1352
N+ +T+ +PP C NV QQ + M Q L ++ ALT
Sbjct: 1000 NKTWKKVTKQENPPASCDNV---------QQKSIIETMEQHLKQFHA---KSLFDHKALT 1047
Query: 1353 LRN---VNVVCSGGITVVS-----------TKSEEEVCSSSFGTSEFSTVDSAQKNFNDY 1398
L++ V V SG +TV++ T + E+ +SS T T S NF +
Sbjct: 1048 LKSQKQVKVEMSGPVTVLTRQTTAAELDSHTPALEQQTTSSEKTPTKRTAASVLNNFIES 1107
Query: 1399 AMNFFTNPTKNLVS--ITKDSELPTCSCLDRVIQKDKGPYYTHLGAGPSVAAVREIMENR 1456
P KNL+ + + P+C C++++I+KD+GP+YTHLGAGP+VAA+REIME R
Sbjct: 1108 PSKLLDTPIKNLLDTPVKTQYDFPSCRCVEQIIEKDEGPFYTHLGAGPNVAAIREIMEER 1167
Query: 1457 YGQKGNAIRIEIVVYTGKEGKSSHGCPIAKWVLRRSSDEEKVLCLVRQRTGHHCPTAVMV 1516
+GQKG AIRIE V+YTGKEGKSS GCPIAKWV+RRSS EEK+LCLVR+R GH C AV+V
Sbjct: 1168 FGQKGKAIRIERVIYTGKEGKSSQGCPIAKWVVRRSSSEEKLLCLVRERAGHTCEAAVIV 1227
Query: 1517 VLIMVWDGIPLPMADRLYTELTENLKSYNGHPTDRRCTLNENRTCTCQGIDPETCGASFS 1576
+LI+VW+GIPL +AD+LY+ELTE L+ Y G T+RRC LNE RTC CQG+DPETCGASFS
Sbjct: 1228 ILILVWEGIPLSLADKLYSELTETLRKY-GTLTNRRCALNEERTCACQGLDPETCGASFS 1286
Query: 1577 FGCSWSMYFNGCKFGRSPSPRRFRIDPSSPLHEKNLEDNLQSLATRLAPIYKQYAPVAYQ 1636
FGCSWSMY+NGCKF RS PR+F++ P E+ LE +LQ+L+T +AP YK+ AP AY
Sbjct: 1287 FGCSWSMYYNGCKFARSKIPRKFKLLGDDPKEEEKLESHLQNLSTLMAPTYKKLAPDAYN 1346
Query: 1637 NQVEYENVARECRLGSKEGRPFSGVTACLDFCAHPHRDIHNMNNGSTVVCTLTREDNRSL 1696
NQ+EYE+ A ECRLG KEGRPFSGVTACLDFCAH HRD+HNM NGST+VCTLTREDNR
Sbjct: 1347 NQIEYEHRAPECRLGLKEGRPFSGVTACLDFCAHAHRDLHNMQNGSTLVCTLTREDNREF 1406
Query: 1697 GVIPQDEQLHVLPLYKLSDTDEFGSKEGMEAKIKSGAIEVLAPRRKKRTCFTQPVPRSGK 1756
G P+DEQLHVLPLYK+SD DEFGS E E K +SGAI+VL+ R+K +PV ++ +
Sbjct: 1407 GGKPEDEQLHVLPLYKVSDVDEFGSVEAQEEKKRSGAIQVLSSFRRKVRMLAEPV-KTCR 1465
Query: 1757 KRAAMMTEVLAHKIRAVEKKPIPRIKRKN-NSTTTNNSKPSSLPTLGSNTETVQPEVKSE 1815
+R + A K+ ++E K K+ S T S L P ++
Sbjct: 1466 QRKLEAKKAAAEKLSSLENSSNKNEKEKSAPSRTKQTENASQAKQLAELLRLSGPVMQQS 1525
Query: 1816 TEPHFILKSSDNTKTYS--LMPSAPHPVKEASPGFSWSPKTASATPAPLKNDATASCGFS 1873
+P + K + HP E+ +S S T P N + S
Sbjct: 1526 QQPQPLQKQPPQPQQQQRPQQQQPHHPQTESVNSYSASGSTNPYMRRP--NPVSPYPNSS 1583
Query: 1874 ERSSTPHCTMPSGRLSGANAAAADGPGISQLGEVAPLP-TLSAPVMEPLINSEPSTGVTE 1932
S T P S ++ AA G ++ + P P L+ P + V +
Sbjct: 1584 HTSDIYGSTSPMNFYSTSSQAA--GSYLNSSNPMNPYPGLLNQNTQYPSYQCNGNLSV-D 1640
Query: 1933 PLTPHQPNHQPSFLTSPQDLASSPMEE 1959
+P+ ++ P + P DL P ++
Sbjct: 1641 NCSPYLGSYSPQ--SQPMDLYRYPSQD 1665
Score = 157 bits (397), Expect = 1e-37
Identities = 80/160 (50%), Positives = 109/160 (68%), Gaps = 15/160 (9%)
Query: 1991 DEYWSDSEHIFLDANIGGVAIAPAHGSVLIECARRELHATTPVEHPNRNHPTRLSLVFYQ 2050
DE WSDSE FLD +IGGVA+AP HGS+LIECA+RELHATTP+++PNRNHPTR+SLVFYQ
Sbjct: 1844 DEVWSDSEQSFLDPDIGGVAVAPTHGSILIECAKRELHATTPLKNPNRNHPTRISLVFYQ 1903
Query: 2051 HKNLNKPQHGFELNKIKFEAKEAKNKK------------MKASEQKDQAANEGPEQSSEV 2098
HK++N+P+HG L + K A++A+ K+ K+ +K + P ++SE
Sbjct: 1904 HKSMNEPKHGLALWEAKM-AEKAREKEEECEKYGPDYVPQKSHGKKVKREPAEPHETSEP 1962
Query: 2099 NELNQIPS--HKALTLTHDNVVTVSPYALTHVAGPYNHWV 2136
L I S + +++T D+ VT SPYA T V GPYN ++
Sbjct: 1963 TYLRFIKSLAERTMSVTTDSTVTTSPYAFTRVTGPYNRYI 2002
>gi|149944516 tet oncogene family member 3 [Homo sapiens]
Length = 1660
Score = 507 bits (1305), Expect = e-143
Identities = 279/644 (43%), Positives = 390/644 (60%), Gaps = 42/644 (6%)
Query: 1231 QPKTVFPPLTQIKLQRYPESAEEKVKVEPLDSL-----SLFHLKTESNGKAFTDKAYNSQ 1285
+ + +FPP+ QI L+ A ++V+ P L S L E + F
Sbjct: 481 EAQPLFPPVRQIVLEGLRSPASQEVQAHPPAPLPASQGSAVPLPPEPSLALFAPSPSRDS 540
Query: 1286 VQLTVNANQKAHPLTQPSSPPNQCANVMAGDDQI-----RFQQVVKEQLMHQRLPTLPGI 1340
+ + P+T + P + DD++ +F+ + P++P
Sbjct: 541 LLPPTQEMRSPSPMT--ALQPGSTGPLPPADDKLEELIRQFEAEFGDSFGLPGPPSVPIQ 598
Query: 1341 SHET-----PLPESALTLRN---VNVVCSGGITVVSTKS--EEEVCSSSFGTSEFSTVDS 1390
E P PES R+ + + SG +TV+ST EE + T + +
Sbjct: 599 DPENQQTCLPAPESPFATRSPKQIKIESSGAVTVLSTTCFHSEEGGQEATPTKAENPLTP 658
Query: 1391 AQKNFNDYAMNFFTNPTKNLVSITK---DSELPTCSCLDRVIQKDKGPYYTHLGAGPSVA 1447
F + + + PTK+L+ +E PTC C++++++KD+GPYYTHLG+GP+VA
Sbjct: 659 TLSGFLESPLKYLDTPTKSLLDTPAKRAQAEFPTCDCVEQIVEKDEGPYYTHLGSGPTVA 718
Query: 1448 AVREIMENRYGQKGNAIRIEIVVYTGKEGKSSHGCPIAKWVLRRSSDEEKVLCLVRQRTG 1507
++RE+ME RYG+KG AIRIE V+YTGKEGKSS GCPIAKWV+RR + EEK+LCLVR R G
Sbjct: 719 SIRELMEERYGEKGKAIRIEKVIYTGKEGKSSRGCPIAKWVIRRHTLEEKLLCLVRHRAG 778
Query: 1508 HHCPTAVMVVLIMVWDGIPLPMADRLYTELTENLKSYNGHPTDRRCTLNENRTCTCQGID 1567
HHC AV+V+LI+ W+GIP + D LY ELT+ L+ Y G+PT RRC LN++RTC CQG D
Sbjct: 779 HHCQNAVIVILILAWEGIPRSLGDTLYQELTDTLRKY-GNPTSRRCGLNDDRTCACQGKD 837
Query: 1568 PETCGASFSFGCSWSMYFNGCKFGRSPSPRRFRIDPSSPLHEKNLEDNLQSLATRLAPIY 1627
P TCGASFSFGCSWSMYFNGCK+ RS +PR+FR+ +P E+ L + Q LAT +AP+Y
Sbjct: 838 PNTCGASFSFGCSWSMYFNGCKYARSKTPRKFRLAGDNPKEEEVLRKSFQDLATEVAPLY 897
Query: 1628 KQYAPVAYQNQVEYENVARECRLGSKEGRPFSGVTACLDFCAHPHRDIHNMNNGSTVVCT 1687
K+ AP AYQNQV E +A +CRLG KEGRPF+GVTAC+DFCAH H+D HN+ NG TVVCT
Sbjct: 898 KRLAPQAYQNQVTNEEIAIDCRLGLKEGRPFAGVTACMDFCAHAHKDQHNLYNGCTVVCT 957
Query: 1688 LTREDNRSLGVIPQDEQLHVLPLYKLSDTDEFGSKEGMEAKIKSGAIEVLA--PRRKKRT 1745
LT+EDNR +G IP+DEQLHVLPLYK+++TDEFGS+E AK+ SGAI+VL PR +R
Sbjct: 958 LTKEDNRCVGKIPEDEQLHVLPLYKMANTDEFGSEENQNAKVGSGAIQVLTAFPREVRRL 1017
Query: 1746 CFTQPVPRSGKKRAAMMTEVLAHKIRAVEKKPI---PRIKRKNNSTTTNNSKPSSLPTLG 1802
P P ++ + A + + ++K+ + +IK++ S P G
Sbjct: 1018 ----PEPAKSCRQRQLEARKAAAEKKKIQKEKLSTPEKIKQEALELAGITSDPGLSLKGG 1073
Query: 1803 SNTETVQPEVKSETEPHF-ILKSSDN--TKTYSLM----PSAPH 1839
+ + ++P +K E + HF K S N ++YS++ PS P+
Sbjct: 1074 LSQQGLKPSLKVEPQNHFSSFKYSGNAVVESYSVLGNCRPSDPY 1117
Score = 162 bits (409), Expect = 4e-39
Identities = 86/189 (45%), Positives = 118/189 (62%), Gaps = 16/189 (8%)
Query: 1962 QHSEADEPPSDEPLSDDPLSPAEEKLPHIDEYWSDSEHIFLDANIGGVAIAPAHGSVLIE 2021
+ A+EPPS + ++ E+ +E WSDSEH FLD NIGGVA+APAHGS+LIE
Sbjct: 1474 EEGPAEEPPSKGAVKEEKGGGGAEE--EEEELWSDSEHNFLDENIGGVAVAPAHGSILIE 1531
Query: 2022 CARRELHATTPVEHPNRNHPTRLSLVFYQHKNLNKPQHGFEL--NKIKFEAKEAKNKKMK 2079
CARRELHATTP++ PNR HPTR+SLVFYQHKNLN+P HG L K+K A+ A+ ++ +
Sbjct: 1532 CARRELHATTPLKKPNRCHPTRISLVFYQHKNLNQPNHGLALWEAKMKQLAERARARQEE 1591
Query: 2080 ASE------------QKDQAANEGPEQSSEVNELNQIPSHKALTLTHDNVVTVSPYALTH 2127
A+ +K + + + + +P+ +AL + D+ VTVS YA T
Sbjct: 1592 AARLGLGQQEAKLYGKKRKWGGTVVAEPQQKEKKGVVPTRQALAVPTDSAVTVSSYAYTK 1651
Query: 2128 VAGPYNHWV 2136
V GPY+ W+
Sbjct: 1652 VTGPYSRWI 1660
Score = 46.2 bits (108), Expect = 3e-04
Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 855 QPKTPENIPSKEPKDGSPVQPSLLSLMKDRRLTLEQVVAIEALTQLSEA--PSENSSPSK 912
+P +P P++G P+ S LS+ K++ ++L+ +AIEALTQLS A +S+P
Sbjct: 186 RPLLSSEVPQISPQEGLPLSQSALSIAKEKNISLQTAIAIEALTQLSSALPQPSHSTPQA 245
Query: 913 S 913
S
Sbjct: 246 S 246
Score = 32.0 bits (71), Expect = 6.7
Identities = 54/269 (20%), Positives = 95/269 (35%), Gaps = 37/269 (13%)
Query: 1750 PVPRSGKKRAAMMTEVLAHK---IRAVEKKP--IPRIKRKNNSTTTNNSKPSSLPTLGSN 1804
P+PR A + ++L I++V K+P +P + +++ P+ P L
Sbjct: 316 PMPRPSPDPMAELEQLLGSASDYIQSVFKRPEALPTKPKVKVEAPSSSPAPAPSPVLQRE 375
Query: 1805 TETVQPEVKSETEPHFILKSSDNTKTYSLMP-----SAPHPVKEASPGFSWSPKTASATP 1859
T E + + L+ + K + S P P + ++PG+ W P ++ P
Sbjct: 376 APTPSSEPDTHQKAQTALQQHLHHKRSLFLEQVHDTSFPAPSEPSAPGW-WPPPSS---P 431
Query: 1860 APLKNDATASCGFSERSSTPHCTMPSGRLSGANAAAADGPGISQLGEVAPLPTLSAPVME 1919
P D ++ P T G + AA P + + ++ A +
Sbjct: 432 VPRLPDRPPK---EKKKKLP--TPAGGPVGTEKAAPGIKPSVRKPIQIKKSRPREAQPLF 486
Query: 1920 PLINSEPSTGVTEPLTPHQPNHQPSFLTSPQDLASSPMEEDEQHSEADEPPSD------- 1972
P + G+ P + H P+ L + Q A E A P D
Sbjct: 487 PPVRQIVLEGLRSPASQEVQAHPPAPLPASQGSAVPLPPEPSLALFAPSPSRDSLLPPTQ 546
Query: 1973 -----------EPLSDDPLSPAEEKLPHI 1990
+P S PL PA++KL +
Sbjct: 547 EMRSPSPMTALQPGSTGPLPPADDKLEEL 575
>gi|158261990 CXXC finger 5 [Homo sapiens]
Length = 322
Score = 86.7 bits (213), Expect = 2e-16
Identities = 46/117 (39%), Positives = 63/117 (53%), Gaps = 18/117 (15%)
Query: 519 PERGLFHASLGIAQLSQAGPSKSDRGSSQVSVTSTVHVVNTTVVTMPVPMVSTSSSSYTT 578
P G F + G+ ++ AG ++ S +H+ M + S SS
Sbjct: 209 PYLGAFPINPGLFIMTPAGVFLAE---------SALHMAGLAEYPMQGELASAISSG--- 256
Query: 579 LLPTLEKKKRKRCGVCEPCQQKTNCGECTYCKNRKNSHQICKKRKCEELKKKPSVVV 635
KKKRKRCG+C PC+++ NC +C+ C+NRK HQICK RKCEELKKKPS +
Sbjct: 257 ------KKKRKRCGMCAPCRRRINCEQCSSCRNRKTGHQICKFRKCEELKKKPSAAL 307
>gi|13376816 CXXC finger 4 [Homo sapiens]
Length = 198
Score = 85.9 bits (211), Expect = 4e-16
Identities = 40/62 (64%), Positives = 45/62 (72%)
Query: 570 STSSSSYTTLLPTLEKKKRKRCGVCEPCQQKTNCGECTYCKNRKNSHQICKKRKCEELKK 629
S+SSSS KKKRKRCGVC PC++ NCG C+ C+NRK HQICK RKCEELKK
Sbjct: 118 SSSSSSGGAGGANPAKKKRKRCGVCVPCKRLINCGVCSSCRNRKTGHQICKFRKCEELKK 177
Query: 630 KP 631
KP
Sbjct: 178 KP 179
>gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [Homo
sapiens]
Length = 3969
Score = 50.1 bits (118), Expect = 2e-05
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
Query: 581 PTLEKKKRKRCGVCEPCQQKTNCGECTYCKN------RKNSHQICKKRKCEELKKKPSVV 634
P + ++ +RCG C CQ +CG CT C + R Q CK RKC+ L+ PS
Sbjct: 1145 PVKKGRRSRRCGQCPGCQVPEDCGVCTNCLDKPKFGGRNIKKQCCKMRKCQNLQWMPSKA 1204
Query: 635 VPLEVIKENKRPQREKK 651
+ K K+ +++ K
Sbjct: 1205 YLQKQAKAVKKKEKKSK 1221
>gi|156142182 CXXC finger 1 (PHD domain) isoform 1 [Homo sapiens]
Length = 660
Score = 49.3 bits (116), Expect = 4e-05
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 565 PVPMVSTSSSSYTTLLPTLEKKKRKRCGVCEPCQQKTNCGECTYCKNRK------NSHQI 618
P P+V+T S + + K+ + CG CE C++ +CG C +C++ K Q
Sbjct: 144 PQPLVATPSQHHQQQQQQI-KRSARMCGECEACRRTEDCGHCDFCRDMKKFGGPNKIRQK 202
Query: 619 CKKRKC-----EELKKKPSVVVPLEVIKENKRPQR 648
C+ R+C E K PS + P+ + RP+R
Sbjct: 203 CRLRQCQLRARESYKYFPSSLSPVTPSESLPRPRR 237
>gi|156142180 CXXC finger 1 (PHD domain) isoform 2 [Homo sapiens]
Length = 656
Score = 49.3 bits (116), Expect = 4e-05
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 565 PVPMVSTSSSSYTTLLPTLEKKKRKRCGVCEPCQQKTNCGECTYCKNRK------NSHQI 618
P P+V+T S + + K+ + CG CE C++ +CG C +C++ K Q
Sbjct: 144 PQPLVATPSQHHQQQQQQI-KRSARMCGECEACRRTEDCGHCDFCRDMKKFGGPNKIRQK 202
Query: 619 CKKRKC-----EELKKKPSVVVPLEVIKENKRPQR 648
C+ R+C E K PS + P+ + RP+R
Sbjct: 203 CRLRQCQLRARESYKYFPSSLSPVTPSESLPRPRR 237
>gi|195927037 DNA (cytosine-5-)-methyltransferase 1 isoform a [Homo
sapiens]
Length = 1632
Score = 47.0 bits (110), Expect = 2e-04
Identities = 28/97 (28%), Positives = 42/97 (43%), Gaps = 15/97 (15%)
Query: 540 KSDRGSSQVSVTSTVHVVNTTVVTMPVPMVSTSSSSYTTLLPTLEKKKRKRCGVCEPCQQ 599
+ DRG ++ + T V+ + T + KR+RCGVCE CQQ
Sbjct: 626 EKDRGPTKATTTKLVYQIFDTFFAEQIEKDDREDKENAF--------KRRRCGVCEVCQQ 677
Query: 600 KTNCGECTYCKN------RKNSHQICKKRKCEELKKK 630
CG+C CK+ S Q C++R+C + K
Sbjct: 678 -PECGKCKACKDMVKFGGSGRSKQACQERRCPNMAMK 713
>gi|4503351 DNA (cytosine-5-)-methyltransferase 1 isoform b [Homo
sapiens]
Length = 1616
Score = 47.0 bits (110), Expect = 2e-04
Identities = 28/97 (28%), Positives = 42/97 (43%), Gaps = 15/97 (15%)
Query: 540 KSDRGSSQVSVTSTVHVVNTTVVTMPVPMVSTSSSSYTTLLPTLEKKKRKRCGVCEPCQQ 599
+ DRG ++ + T V+ + T + KR+RCGVCE CQQ
Sbjct: 610 EKDRGPTKATTTKLVYQIFDTFFAEQIEKDDREDKENAF--------KRRRCGVCEVCQQ 661
Query: 600 KTNCGECTYCKN------RKNSHQICKKRKCEELKKK 630
CG+C CK+ S Q C++R+C + K
Sbjct: 662 -PECGKCKACKDMVKFGGSGRSKQACQERRCPNMAMK 697
>gi|197276602 microtubule-associated protein 4 isoform 5 [Homo
sapiens]
Length = 817
Score = 46.6 bits (109), Expect = 3e-04
Identities = 46/189 (24%), Positives = 71/189 (37%), Gaps = 21/189 (11%)
Query: 1751 VPRSGKKRAAMMT---EVLAHKIRAVEKKPIPRIKRKNNSTTTNNSKPSSLPTLGSNTET 1807
VP + KR A+ + +L K + KP P K + SKP+S P S +++
Sbjct: 483 VPAAPPKRPAVASARPSILPSK----DVKPKPIADAKAPEKRASPSKPASAPASRSGSKS 538
Query: 1808 VQPEVKSETEPHFILKSSDNTKTYSLMPSAPHPVKEASPGFSWSPKTASATPAPLKNDAT 1867
Q K+ T + +L+P P +K TA + PA L +
Sbjct: 539 TQTVAKTTTAAAVASTGPSSRSPSTLLPKKPTAIKTEGKPAEVKKMTAKSVPADLSRPKS 598
Query: 1868 ASCGFSERSSTPHCTMPSGRLSGANAAAADGPGISQLGEVAPLPTLSAPVMEPLINSEPS 1927
S ++++T LSG AA P V P S P P I+ +P+
Sbjct: 599 TSTSSMKKTTT---------LSGTAPAAGVVP-----SRVKATPMPSRPSTTPFIDKKPT 644
Query: 1928 TGVTEPLTP 1936
+ TP
Sbjct: 645 SAKPSSTTP 653
>gi|197276600 microtubule-associated protein 4 isoform 4 [Homo
sapiens]
Length = 1135
Score = 46.6 bits (109), Expect = 3e-04
Identities = 46/189 (24%), Positives = 71/189 (37%), Gaps = 21/189 (11%)
Query: 1751 VPRSGKKRAAMMT---EVLAHKIRAVEKKPIPRIKRKNNSTTTNNSKPSSLPTLGSNTET 1807
VP + KR A+ + +L K + KP P K + SKP+S P S +++
Sbjct: 748 VPAAPPKRPAVASARPSILPSK----DVKPKPIADAKAPEKRASPSKPASAPASRSGSKS 803
Query: 1808 VQPEVKSETEPHFILKSSDNTKTYSLMPSAPHPVKEASPGFSWSPKTASATPAPLKNDAT 1867
Q K+ T + +L+P P +K TA + PA L +
Sbjct: 804 TQTVAKTTTAAAVASTGPSSRSPSTLLPKKPTAIKTEGKPAEVKKMTAKSVPADLSRPKS 863
Query: 1868 ASCGFSERSSTPHCTMPSGRLSGANAAAADGPGISQLGEVAPLPTLSAPVMEPLINSEPS 1927
S ++++T LSG AA P V P S P P I+ +P+
Sbjct: 864 TSTSSMKKTTT---------LSGTAPAAGVVP-----SRVKATPMPSRPSTTPFIDKKPT 909
Query: 1928 TGVTEPLTP 1936
+ TP
Sbjct: 910 SAKPSSTTP 918
>gi|47519675 microtubule-associated protein 4 isoform 2 [Homo sapiens]
Length = 887
Score = 46.6 bits (109), Expect = 3e-04
Identities = 46/189 (24%), Positives = 71/189 (37%), Gaps = 21/189 (11%)
Query: 1751 VPRSGKKRAAMMT---EVLAHKIRAVEKKPIPRIKRKNNSTTTNNSKPSSLPTLGSNTET 1807
VP + KR A+ + +L K + KP P K + SKP+S P S +++
Sbjct: 483 VPAAPPKRPAVASARPSILPSK----DVKPKPIADAKAPEKRASPSKPASAPASRSGSKS 538
Query: 1808 VQPEVKSETEPHFILKSSDNTKTYSLMPSAPHPVKEASPGFSWSPKTASATPAPLKNDAT 1867
Q K+ T + +L+P P +K TA + PA L +
Sbjct: 539 TQTVAKTTTAAAVASTGPSSRSPSTLLPKKPTAIKTEGKPAEVKKMTAKSVPADLSRPKS 598
Query: 1868 ASCGFSERSSTPHCTMPSGRLSGANAAAADGPGISQLGEVAPLPTLSAPVMEPLINSEPS 1927
S ++++T LSG AA P V P S P P I+ +P+
Sbjct: 599 TSTSSMKKTTT---------LSGTAPAAGVVP-----SRVKATPMPSRPSTTPFIDKKPT 644
Query: 1928 TGVTEPLTP 1936
+ TP
Sbjct: 645 SAKPSSTTP 653
>gi|47519639 microtubule-associated protein 4 isoform 1 [Homo sapiens]
Length = 1152
Score = 46.6 bits (109), Expect = 3e-04
Identities = 46/189 (24%), Positives = 71/189 (37%), Gaps = 21/189 (11%)
Query: 1751 VPRSGKKRAAMMT---EVLAHKIRAVEKKPIPRIKRKNNSTTTNNSKPSSLPTLGSNTET 1807
VP + KR A+ + +L K + KP P K + SKP+S P S +++
Sbjct: 748 VPAAPPKRPAVASARPSILPSK----DVKPKPIADAKAPEKRASPSKPASAPASRSGSKS 803
Query: 1808 VQPEVKSETEPHFILKSSDNTKTYSLMPSAPHPVKEASPGFSWSPKTASATPAPLKNDAT 1867
Q K+ T + +L+P P +K TA + PA L +
Sbjct: 804 TQTVAKTTTAAAVASTGPSSRSPSTLLPKKPTAIKTEGKPAEVKKMTAKSVPADLSRPKS 863
Query: 1868 ASCGFSERSSTPHCTMPSGRLSGANAAAADGPGISQLGEVAPLPTLSAPVMEPLINSEPS 1927
S ++++T LSG AA P V P S P P I+ +P+
Sbjct: 864 TSTSSMKKTTT---------LSGTAPAAGVVP-----SRVKATPMPSRPSTTPFIDKKPT 909
Query: 1928 TGVTEPLTP 1936
+ TP
Sbjct: 910 SAKPSSTTP 918
>gi|148806928 hypothetical protein LOC57482 [Homo sapiens]
Length = 1233
Score = 45.1 bits (105), Expect = 8e-04
Identities = 66/330 (20%), Positives = 113/330 (34%), Gaps = 45/330 (13%)
Query: 1782 KRKNNSTTTNNSKPSSLPTLGSNTETVQPE---VKSETEPHFILKSSDNTKTYSLMPSAP 1838
K+K ++T +S + P GS + E +K K + +T+ S PS+
Sbjct: 867 KKKKRHSSTGDSADAGPPAAGSARGEKEMEGVALKHGPSLPQERKQAPSTRRDSAEPSSS 926
Query: 1839 HPVKEASPGFSWSPKTASATPAPLKNDATASCGFSERSSTPHCTMPSGRLSGANAAAADG 1898
V A PG P +S TPAP + A +++ A A
Sbjct: 927 RSVPVAHPG---PPPASSQTPAPEHDKAANKMPLAQKP-----------------ALAPK 966
Query: 1899 PGISQLGEVAPLPTLSAPVMEPLINSEPSTGVTEPLTPHQPNHQPSFLTSPQDLASSPME 1958
P SQ +PL LS P + L++ EP P + + + S P P E
Sbjct: 967 P-TSQTPPASPLSKLSRPYLVELLSRRAGRPDPEPSEPSKEDQESSDRRPPS--PPGPEE 1023
Query: 1959 EDEQHSEADEPPSDEPLSDDPLSPAEEKLPHIDEYWSDSEHIFLDANIGGVAIAPAHGSV 2018
Q + +E ++ + PL +++ P E L
Sbjct: 1024 RKGQKRDEEEEATERKPASPPLPATQQEKPSQTPEAGRKEKPMLQ--------------- 1068
Query: 2019 LIECARRELHATTPVEHPNRNHPTRLSLVFYQHKNLNKPQHGFELNKIKFEAKEAKNKKM 2078
+R L + E P ++L + K + Q E K EAK+A+
Sbjct: 1069 ----SRHSLDGSKLTEKVETAQPLWITLALQKQKGFREQQATREERKQAREAKQAEKLSK 1124
Query: 2079 KASEQKDQAANEGPEQSSEVNELNQIPSHK 2108
+ Q + ++ +++ +P K
Sbjct: 1125 ENVSVSVQPGSSSVSRAGSLHKSTALPEEK 1154
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 45.1 bits (105), Expect = 8e-04
Identities = 63/277 (22%), Positives = 99/277 (35%), Gaps = 51/277 (18%)
Query: 1739 PRRKKRTCFTQPVPRSGKKRAAMMTEVLAHKIRAVEKKPIPRIKRKNNSTTTNNSKPSSL 1798
P+R+ R QP P K + + + + P P+ K+K SS
Sbjct: 153 PQRRAREA-KQPAPEPPKPYSLVRES-------SSSRSPTPKQKKKKKKKDRGRRSESSS 204
Query: 1799 PTLGSNTETVQPEVKSETEPHFILKSSDNTKTYSLMPSAPHPVKEASPGFSWSPKTASAT 1858
P + + + +SE+E S K S P + K+ ++ S T
Sbjct: 205 PRRERKKSSKKKKHRSESE-------SKKRKHRSPTPKSKRKSKDKK-----RKRSRSTT 252
Query: 1859 PAPLKNDATASCGFSERSSTPHCTMPSGRLSG-----ANAAAADGPGISQLGEVAPLPTL 1913
PAP A S SS+ S + A A + P + GE
Sbjct: 253 PAPKSRRAHRSTSADSASSSDTSRSRSRSAAAKTHTTALAGRSPSPASGRRGEG------ 306
Query: 1914 SAPVMEPLINS-----EPSTGVTEPLTPHQ-------------PNHQPS-FLTSPQDLAS 1954
AP EP S P T +P +P++ P+ P T P+ A
Sbjct: 307 DAPFSEPGTTSTQRPSSPETATKQPSSPYEDKDKDKKEKSATRPSPSPERSSTGPEPPAP 366
Query: 1955 SPMEEDEQHSEADEPPSDEPLSDDPLSPAEEKLPHID 1991
+P+ E+H + +P + PLS +P++P E P D
Sbjct: 367 TPLLA-ERHGGSPQPLATTPLSQEPVNPPSEASPTRD 402
Score = 37.7 bits (86), Expect = 0.12
Identities = 54/231 (23%), Positives = 88/231 (38%), Gaps = 34/231 (14%)
Query: 1741 RKKRTCFTQPVPRSGKKRAAMMTEVLAHKIRAVEKKPIPRIKRKNNST---TTNNSKP-- 1795
RK ++ +Q RS + + + + R++ PR K K+ + + + S P
Sbjct: 730 RKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSS---PRSKAKSRLSLRRSLSGSSPCP 786
Query: 1796 ---SSLPTLGSNTETVQPEVKSETEPHFILKSSD-----NTKTYSLMP---SAPHP-VKE 1843
S P S + + QP+ KS T P SS +KT S S+PHP VK
Sbjct: 787 KQKSQTPPRRSRSGSSQPKAKSRTPPRRSRSSSSPPPKQKSKTPSRQSHSSSSPHPKVKS 846
Query: 1844 ASPGFSWSPKTASATPAPLKNDATASCGFSERSSTPHCTMPSGRLSGANAAAADGPGISQ 1903
+P P+ S T + S S+P + S S + + + P +
Sbjct: 847 GTP-----PRQGSITSPQANEQSVTPQRRSCFESSPDPELKSRTPSRHSCSGSSPPRVK- 900
Query: 1904 LGEVAPLPTLSAPVMEPLINSEPSTGVTEPLTPHQPNHQPSFLTSPQDLAS 1954
+ + P P +S P V ++P Q +H S SP + S
Sbjct: 901 --------SSTPPRQSPSRSSSPQPKVKAIISPRQRSHSGSSSPSPSRVTS 943
Score = 36.6 bits (83), Expect = 0.27
Identities = 37/163 (22%), Positives = 59/163 (36%), Gaps = 10/163 (6%)
Query: 1835 PSAPHP---VKEASPGFSWSPKTASATPAPLKNDATASCGFSERSSTPHCTMPSGRLSGA 1891
P PH AS G A+ PA + +++S S SS+ + S SG+
Sbjct: 2499 PGVPHSDVGEPPASTGAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGS 2558
Query: 1892 NAAAADGPGISQLGEVA------PLPTLSAPVMEPLINSEPSTGVTEPLTPHQPNHQPSF 1945
+++ ++G + EVA P P V E EP+ + + + S
Sbjct: 2559 SSSDSEGSSLPVQPEVALKRVPSPTPAPKEAVREGR-PPEPTPAKRKRRSSSSSSSSSSS 2617
Query: 1946 LTSPQDLASSPMEEDEQHSEADEPPSDEPLSDDPLSPAEEKLP 1988
+S +SS S + S S P P + LP
Sbjct: 2618 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALP 2660
>gi|116284392 mucin 2 precursor [Homo sapiens]
Length = 5179
Score = 44.3 bits (103), Expect = 0.001
Identities = 44/200 (22%), Positives = 73/200 (36%), Gaps = 6/200 (3%)
Query: 1788 TTTNNSKPSSLPTLGSNTETVQPEVKSETEPHFILKSSDNTKTYSLMPS---APHPVKEA 1844
TTT P++ P+ + T P + + T P S T T + P+ +P
Sbjct: 1567 TTTTTPPPTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPI 1626
Query: 1845 SPGFSWSPKTASATPAPLKNDATASCGFSERSSTPHCTMPSGRLSGANAAAADGPGISQL 1904
+P S + + TP+P T + S P T PS ++ S +
Sbjct: 1627 TPPTSTTTLPPTTTPSPPPTTTTTPPP-TTTPSPPTTTTPSPPITTTTTPPPTTTPSSPI 1685
Query: 1905 GEVAPLPTLSAPVMEPLIN-SEPSTGVTEPLTPHQPNHQPSFLTSPQDLASSPMEEDEQH 1963
PT + P S P T T P + P+ P+ +T+P ++P
Sbjct: 1686 TTTPSPPTTTMTTPSPTTTPSSPITTTTTPSSTTTPSPPPTTMTTPSP-TTTPSPPTTTM 1744
Query: 1964 SEADEPPSDEPLSDDPLSPA 1983
+ + PL+ PL P+
Sbjct: 1745 TTLPPTTTSSPLTTTPLPPS 1764
Score = 37.0 bits (84), Expect = 0.21
Identities = 39/168 (23%), Positives = 57/168 (33%), Gaps = 17/168 (10%)
Query: 1788 TTTNNSKPSSLPTLGSNTETVQPEVKSETEPHFILKSSDNTKTYS---LMPSAPHPVKEA 1844
TTT + P+S TL T P + T P S T T S + P P
Sbjct: 1622 TTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPPPTTTP 1681
Query: 1845 SPGFSWSPK---TASATPAPLKNDATASCGFSERSSTPHCTMPSGRLSGANAAAADGPGI 1901
S + +P T TP+P ++ + SST + P ++ + P
Sbjct: 1682 SSPITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSSTTTPSPPPTTMTTPSPTTTPSP-- 1739
Query: 1902 SQLGEVAPLPTLSAPVMEPLINSEPSTGVTEPLTPHQPNHQPSFLTSP 1949
PT + + P S P T P + P P T+P
Sbjct: 1740 ---------PTTTMTTLPPTTTSSPLTTTPLPPSITPPTFSPFSTTTP 1778
Score = 34.3 bits (77), Expect = 1.3
Identities = 47/199 (23%), Positives = 71/199 (35%), Gaps = 17/199 (8%)
Query: 1788 TTTNNSKPSSLPTLGSNTETVQPEVKSETEPHFILKSSDNTKTYSLMPS---APHPVKEA 1844
TTT + P+S TL T P + T P S T T + P+ +P
Sbjct: 1403 TTTPSPPPTSTTTLPPTTTPSPPTTTTTTPPPTTTPSPPITTTTTPPPTTTPSPPISTTT 1462
Query: 1845 SPGFSWSPKTASATPAPLKNDATASCGFSERSSTPHCTMPSGRLSGANAAAADGPGISQL 1904
+P + +P + TP+P T S + ++ P T PS + A +
Sbjct: 1463 TPPPTTTPSPPTTTPSP--PTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPASTTTLPPT 1520
Query: 1905 GEVAPLPTLSAPVMEPLINSEPSTGVTEPLTPHQPNHQPSFLTSPQDLASSPMEEDEQHS 1964
+P PT + P + PS T P+TP S T P SP +
Sbjct: 1521 TTPSP-PTTTTTTPPP--TTTPSPPTTTPITP-----PTSTTTLPPTTTPSP----PPTT 1568
Query: 1965 EADEPPSDEPLSDDPLSPA 1983
PP+ P +P+
Sbjct: 1569 TTTPPPTTTPSPPTTTTPS 1587
Score = 33.9 bits (76), Expect = 1.8
Identities = 45/209 (21%), Positives = 64/209 (30%), Gaps = 9/209 (4%)
Query: 1789 TTNNSKPSSLPTLGSNTETVQPEVKSETEPHFILKSSDNTKTYSLMPSAPHP--VKEASP 1846
TT S P + T T T P + + T P S T T S + P P +P
Sbjct: 1435 TTTPSPPITTTTTPPPTTTPSPPISTTTTPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTP 1494
Query: 1847 GFSWSPKTASATP-------APLKNDATASCGFSERSSTPHCTMPSGRLSGANAAAADGP 1899
+ +P + TP L T S + ++ P T PS +
Sbjct: 1495 PPTTTPSPPTTTPITPPASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTT 1554
Query: 1900 GISQLGEVAPLPTLSAPVMEPLINSEPSTGVTEPLTPHQPNHQPSFLTSPQDLASSPMEE 1959
+ +P PT + S P+T P T P+ SP ++
Sbjct: 1555 TLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPP 1614
Query: 1960 DEQHSEADEPPSDEPLSDDPLSPAEEKLP 1988
S P P S L P P
Sbjct: 1615 TTTPSPPTTTPITPPTSTTTLPPTTTPSP 1643
Score = 32.0 bits (71), Expect = 6.7
Identities = 44/212 (20%), Positives = 67/212 (31%), Gaps = 10/212 (4%)
Query: 1777 PIPRIKRKNNSTTTNNSKPSSLPTLGSNTETVQPEVKSETEPHFILKSSDNTKTYSLMPS 1836
P P + TTT + P + T + P + T P S T T + P+
Sbjct: 1477 PSPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPASTTTLPPTTTPSPPTTTTTTPPPT 1536
Query: 1837 ---APHPVKEASPGFSWSPKTASATPAPLKNDATASCGFSERSSTPHCTMPSG---RLSG 1890
+P +P S + + TP+P T + S P T PS +
Sbjct: 1537 TTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPP-TTTPSPPTTTTPSPPTITTTT 1595
Query: 1891 ANAAAADGPGISQLGEVAPLPTLSAPVMEPLINSEPSTGVTEPLTPHQPNHQPSFLTSPQ 1950
P + P T S P P+ +T + TP P P+ T+P
Sbjct: 1596 PPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPP---PTTTTTPP 1652
Query: 1951 DLASSPMEEDEQHSEADEPPSDEPLSDDPLSP 1982
+ S + P + P SP
Sbjct: 1653 PTTTPSPPTTTTPSPPITTTTTPPPTTTPSSP 1684
>gi|91982772 mucin 17 [Homo sapiens]
Length = 4493
Score = 43.9 bits (102), Expect = 0.002
Identities = 50/231 (21%), Positives = 86/231 (37%), Gaps = 27/231 (11%)
Query: 1748 TQPVPRSGKKRAAMMTEVLAHKIRAVEKKPIPRIKRKNNSTTTNNSKPSSLPTLGSN-TE 1806
+ P+P G +M T + + + P+ +++ +T ++ P T +N TE
Sbjct: 2141 SSPIPTEG---TSMQTSTYSDRRTPLTSMPVSTTVVASSAISTLSTTPVDTSTPVTNSTE 2197
Query: 1807 TVQPEVKSETEPHFILKSSDNTKTYSLMPSAPHPVKEASPGFSWSPKTASATPAPLKNDA 1866
SE S+ + ++ MP + PV + + ++TP +A
Sbjct: 2198 ARSSPTTSEGTSMPTSTPSEGSTPFTSMPVSTMPVVTSEASTLSATPVDTSTPVTTSTEA 2257
Query: 1867 TASCGFSERSSTPHCTMPSGRLSGANAAAADGPGISQLGEVAPLPTLSAPVMEPLI-NSE 1925
T+S +E +S P T+ G P S PV L+ NSE
Sbjct: 2258 TSSPTTAEGTSIPTSTLSEG----------------------TTPLTSIPVSHTLVANSE 2295
Query: 1926 PSTGVTEPLTPHQPNHQPSFLTSPQDLASSPMEEDEQHSEADEPPSDEPLS 1976
ST T P+ + P + +SP A SE + P + P+S
Sbjct: 2296 VSTLSTTPVDSNTPFTTSTEASSPPPTAEGTSMPTSTSSEGNTPLTRMPVS 2346
Score = 42.0 bits (97), Expect = 0.006
Identities = 48/213 (22%), Positives = 81/213 (38%), Gaps = 27/213 (12%)
Query: 1773 VEKKPIPRIKRKNNSTT-TNNSKPSSLPTLGSNTETVQPEVKSETEPHFILKSSDNTKTY 1831
V P+ + +STT + S P + T S++ T T P S+ T
Sbjct: 2404 VSTMPVVSSEASTHSTTPVDTSTPVTTSTEASSSPTTAEGTSIPTSP-----PSEGTTPL 2458
Query: 1832 SLMPSAPHPVKEASPGFSWSPKTASATPAPLKNDATASCGFSERSSTPHCTMPSGRLSGA 1891
+ MP + PV + G + ++TP +A++S +E P T
Sbjct: 2459 ASMPVSTTPVVSSEAGTLSTTPVDTSTPMTTSTEASSSPTTAEDIVVPIST--------- 2509
Query: 1892 NAAAADGPGISQLGEVAPLPTLSAPVMEPLINSEPSTGVTEPLTPHQPNHQPSFLTSPQD 1951
A++G + + +P + PV P E ST T P+ + P + ++S
Sbjct: 2510 ---ASEGSTL-----LTSIPVSTTPVASP----EASTLSTTPVDSNSPVVTSTEISSSAT 2557
Query: 1952 LASSPMEEDEQHSEADEPPSDEPLSDDPLSPAE 1984
A +SE P P+S PL+ +E
Sbjct: 2558 SAEGTSMPTSTYSEGSTPLRSMPVSTKPLASSE 2590
Score = 40.8 bits (94), Expect = 0.014
Identities = 56/262 (21%), Positives = 96/262 (36%), Gaps = 21/262 (8%)
Query: 1786 NSTTTNNSKPSSLPTLGSNTETVQPEVKSETEP------HFILKSSDNTKTYSLMPSAPH 1839
++ T +++PSSLPT T + + + P IL +S T S +P
Sbjct: 362 STLVTTSTEPSSLPTTAEATSMLTSTLSEGSTPLTNMPVSTILVASSEASTTSTIPVDSK 421
Query: 1840 PVKEASPGFSWSPKTASATPAPLKNDATASCGFSERSSTPHCTMPSGRLSGANAAAADGP 1899
+ S SP TA T +T S G + +S P T P +N +
Sbjct: 422 TFVTTASEASSSPTTAEDTSIA---TSTPSEGSTPLTSMPVSTTPVASSEASNLSTTPVD 478
Query: 1900 GISQL---GEVAPLPTL----SAPVMEPLINSEPSTGVTEPLTPHQPNHQPSFLTSPQDL 1952
+Q+ E + P S P P S P T ++ P + + T+P D
Sbjct: 479 SKTQVTTSTEASSSPPTAEVNSMPTSTPSEGSTPLTSMSVSTMPVASSEASTLSTTPVD- 537
Query: 1953 ASSPMEEDEQHSEADEPPSDEPLSDDPLSPAEEKLPHIDEYWSDSEHIFLDANIGGVAIA 2012
S+P+ + S + P E S +P+E P + S + + + +
Sbjct: 538 TSTPVTTSSEASSSSTTP--EGTSIPTSTPSEGSTPLTN--MPVSTRLVVSSEASTTSTT 593
Query: 2013 PAHGSVLIECARRELHATTPVE 2034
PA + + + ++T E
Sbjct: 594 PADSNTFVTTSSEASSSSTTAE 615
Score = 40.0 bits (92), Expect = 0.024
Identities = 51/219 (23%), Positives = 77/219 (35%), Gaps = 14/219 (6%)
Query: 1775 KKPIPRIKRKNNSTTTNNSKPSSLPTLGSNTETVQPEVKSETEPHFILKSSDNTKTYSLM 1834
+ P+ ++S TT + T G T + T P +S T S
Sbjct: 2956 RTPVTTSAEASSSPTTAEGTSMPISTPGER-RTPLTSMSVSTMP----VASSEASTLSRT 3010
Query: 1835 PSAPHPVKEASPGFSWSPKTASATPAPLKNDATASCGFSERS-STPHCTMPSGRLSGANA 1893
P+ S S SP TA T P+ + S + ST +P
Sbjct: 3011 PADTSTPVTTSTEASSSPTTAEGTGIPISTPSEGSTPLTSIPVSTTPVAIPEASTLSTTP 3070
Query: 1894 AAADGPGISQLGEVAPLPT----LSAPVMEPLINSEPSTGVTEPLTPHQPNHQPSFLTSP 1949
++ P ++ EV+ PT S P+ S P TGV TP + + T+P
Sbjct: 3071 VDSNSPVVTST-EVSSSPTPAEGTSMPISTYSEGSTPLTGVPVSTTPVTSSAISTLSTTP 3129
Query: 1950 QDLASSPMEEDEQHSEADEPPSDEPLSDDPLSPAEEKLP 1988
D ++ E HS P + E S +P+E P
Sbjct: 3130 VDTSTPVTTSTEAHS---SPTTSEGTSMPTSTPSEGSTP 3165
Score = 38.9 bits (89), Expect = 0.055
Identities = 67/260 (25%), Positives = 103/260 (39%), Gaps = 38/260 (14%)
Query: 1751 VPRSGKKRAAMMTEVLAHKIRAVEKKPIPRIKRKNNSTTTNNSKPS---SLPTLGSNTET 1807
+P S K A+ +E + VE I + +S+ T PS S P+ GS T
Sbjct: 221 MPASTMKVAS--SEAITLLTTPVEISTPVTISAQASSSPTTAEGPSLSNSAPSGGSTPLT 278
Query: 1808 VQPEVKSETEPHFILKSSDNTKTYSLMPSAPHPVKEASPGFSWSPKTASATPAPLKNDAT 1867
P +L S T S P+A + S S SP TA T P +T
Sbjct: 279 RMPL-------SVMLVVSSEASTLSTTPAATNIPVITSTEASSSPTTAEGTSIP---TST 328
Query: 1868 ASCGFSERSSTPHCTMP--SGRLSGANAAAAD-GPGISQLGEVAPLPT-------LSAPV 1917
+ G + +STP TMP + +S + D ++ E + LPT L++ +
Sbjct: 329 YTEGSTPLTSTPASTMPVATSEMSTLSITPVDTSTLVTTSTEPSSLPTTAEATSMLTSTL 388
Query: 1918 ME---PLINSEPST----GVTEPLTPHQPNHQPSFLTSPQDLASSPMEEDEQH------S 1964
E PL N ST T P +F+T+ + +SSP ++ S
Sbjct: 389 SEGSTPLTNMPVSTILVASSEASTTSTIPVDSKTFVTTASEASSSPTTAEDTSIATSTPS 448
Query: 1965 EADEPPSDEPLSDDPLSPAE 1984
E P + P+S P++ +E
Sbjct: 449 EGSTPLTSMPVSTTPVASSE 468
Score = 38.9 bits (89), Expect = 0.055
Identities = 62/280 (22%), Positives = 111/280 (39%), Gaps = 50/280 (17%)
Query: 1737 LAPRRKKRTCFTQPVPRSGKKRAAMM----TEVLAHKIRAVEKKPIPRIKRKNNSTTTNN 1792
L+P + T P G A M T V++ ++ + P+ +N+ T +
Sbjct: 3379 LSPTTAEGTSIPTSSPSEGTTPLASMPVSTTPVVSSEVNTLSTTPVD-----SNTLVTTS 3433
Query: 1793 SKPSSLPTLGSNTETVQPEVKSETEPHFILKSSDNTKTYSLMPSAPHPV--KEAS----- 1845
++ SS PT+ T + + T +S+ + S+MP + PV EAS
Sbjct: 3434 TEASSSPTIAEGTS-----LPTST-------TSEGSTPLSIMPLSTTPVASSEASTLSTT 3481
Query: 1846 ------PGFSWSPKTASATPAPLKNDATASCGFSERSSTPHCTMPSGRLSGANAAAA--- 1896
P + SP +S T A + + T++ G STP MP A++ A+
Sbjct: 3482 PVDTSTPVTTSSPTNSSPTTAEVTSMPTSTAG---EGSTPLTNMPVSTTPVASSEASTLS 3538
Query: 1897 -----DGPGISQLGEVAPLP-TLSAPVMEPLINSEPSTGVTEPL--TPHQPNHQPSFLTS 1948
++ + + P TL M SE S+ +T L + + + + S ++
Sbjct: 3539 TTPVDSNTFVTSSSQASSSPATLQVTTMRMSTPSEGSSSLTTMLLSSTYVTSSEASTPST 3598
Query: 1949 PQDLASSPMEEDEQHSEADEPPSDEPLSDDPLSPAEEKLP 1988
P S+P+ Q + PP E ++ +P+E P
Sbjct: 3599 PSVDRSTPVTTSTQSNSTPTPP--EVITLPMSTPSEVSTP 3636
Score = 38.5 bits (88), Expect = 0.071
Identities = 49/193 (25%), Positives = 75/193 (38%), Gaps = 18/193 (9%)
Query: 1796 SSLPTLGSNTETVQPEVKSETEPHFILKSSDNTKTYSLMPSAPHPVKEASPGFSWSPKTA 1855
S++ TL + V + TE +SS T + MP++ +PG +P T+
Sbjct: 880 SAISTLSTTPVDTSTPVTNSTEA----RSSPTTSEGTSMPTS-------TPGEGSTPLTS 928
Query: 1856 ---SATPAPLKNDATASCGFSERSSTPHCTMPSGRLSGANAAAADGPGISQLGEVAPLPT 1912
S TP + ++A +STP T S A P + PL
Sbjct: 929 MPDSTTPV-VSSEARTLSATPVDTSTPVTTSTEATSSPTTAEGTSIPTSTPSEGTTPLT- 986
Query: 1913 LSAPVMEPLI-NSEPSTGVTEPLTPHQPNHQPSFLTSPQDLASSPMEEDEQHSEADEPPS 1971
S PV L+ NSE ST T P+ + P + +SP A SE P +
Sbjct: 987 -STPVSHTLVANSEASTLSTTPVDSNTPLTTSTEASSPPPTAEGTSMPTSTPSEGSTPLT 1045
Query: 1972 DEPLSDDPLSPAE 1984
P+S ++ +E
Sbjct: 1046 RMPVSTTMVASSE 1058
Score = 34.3 bits (77), Expect = 1.3
Identities = 50/212 (23%), Positives = 74/212 (34%), Gaps = 27/212 (12%)
Query: 1785 NNSTTTNNSKPSSLPTLGSNTETVQPEVKSETEPHFILKSSDNTKTYSLMPSAPHPVKEA 1844
+++T S P+S T GS T P + L +S T S P
Sbjct: 669 SSTTAEGTSMPTSTYTEGSTPLTSMPV-------NTTLVASSEASTLSTTPVDTSTPVTT 721
Query: 1845 SPGFSWSPKTA------SATPA---------PLKNDATASCGFSERSSTP-----HCTMP 1884
S S SP TA ++TP+ P+ S S S+TP H T
Sbjct: 722 STEASSSPTTADGASMPTSTPSEGSTPLTSMPVSKTLLTSSEASTLSTTPLDTSTHITTS 781
Query: 1885 SGRLSGANAAAADGPGISQLGEVAPLPTLSAPVMEPLINSEPSTGVTEPLTPHQPNHQPS 1944
+ IS E +PL T + P+ + E ST T P+ + P +
Sbjct: 782 TEASCSPTTTEGTSMPISTPSEGSPLLTSIPVSITPVTSPEASTLSTTPVDSNSPVTTST 841
Query: 1945 FLTSPQDLASSPMEEDEQHSEADEPPSDEPLS 1976
++S A +SE P + P+S
Sbjct: 842 EVSSSPTPAEGTSMPTSTYSEGRTPLTSMPVS 873
Score = 34.3 bits (77), Expect = 1.3
Identities = 49/228 (21%), Positives = 88/228 (38%), Gaps = 26/228 (11%)
Query: 1777 PIPRIKRKNNSTTTNN--SKPSSLPTLGSNTETVQPEVKSETEPHFILKSSDNTKTYSLM 1834
P+ ++S TT+ S P+S P+ GS T P ++ S D+T + + +
Sbjct: 3135 PVTTSTEAHSSPTTSEGTSMPTSTPSEGSTPLTYMP-----VSTMLVVSSEDSTLSATPV 3189
Query: 1835 PSAPHPVKEASPGFSWSPKTASATPA-------------PLKNDATASCGFSERSSTP-- 1879
++ PV ++ S + ++ P P+ N AS S S+TP
Sbjct: 3190 DTST-PVTTSTEATSSTTAEGTSIPTSTPSEGMTPLTSVPVSNTPVASSEASILSTTPVD 3248
Query: 1880 -HCTMPSGRLSGANAAAADGPGI-SQLGEVAPLPTLSAPVMEPLI-NSEPSTGVTEPLTP 1936
+ + + + ++ A+G + + P S PV + +SE ST T P
Sbjct: 3249 SNTPLTTSTEASSSPPTAEGTSMPTSTPSEGSTPLTSMPVSTTTVASSETSTLSTTPADT 3308
Query: 1937 HQPNHQPSFLTSPQDLASSPMEEDEQHSEADEPPSDEPLSDDPLSPAE 1984
P S +S +A +SE P ++ S P+ +E
Sbjct: 3309 STPVTTYSQASSSPPIADGTSMPTSTYSEGSTPLTNMSFSTTPVVSSE 3356
Score = 33.1 bits (74), Expect = 3.0
Identities = 41/200 (20%), Positives = 71/200 (35%), Gaps = 28/200 (14%)
Query: 1786 NSTTTNNSKPSSLPTLGSNTETVQPEVKSETEPHFILKSSDNTKTYSLMPSAPHPVKEAS 1845
++T +NS P + T ++ T S+ T + +P + PV +
Sbjct: 1711 STTPVDNSTPVTTSTEARSSPTTSEGTSMPNST-----PSEGTTPLTSIPVSTTPVLSSE 1765
Query: 1846 PGFSWSPKTASATPAPLKNDATASCGFSERSSTPHCTMPSGRLSGANAAAADGPGISQLG 1905
+ ++TP +AT+S +E +S P T+ G
Sbjct: 1766 ASTLSATPIDTSTPVTTSTEATSSPTTAEGTSIPTSTLSEGM------------------ 1807
Query: 1906 EVAPLPTLSAPVMEPLI-NSEPSTGVTEPLTPHQPNHQPSFLTSPQDLASSPMEEDEQHS 1964
P S PV L+ NSE ST T P+ + P + ++S A S
Sbjct: 1808 ----TPLTSTPVSHTLVANSEASTLSTTPVDSNSPVVTSTAVSSSPTPAEGTSIATSTPS 1863
Query: 1965 EADEPPSDEPLSDDPLSPAE 1984
E + P+S ++ +E
Sbjct: 1864 EGSTALTSIPVSTTTVASSE 1883
Score = 32.0 bits (71), Expect = 6.7
Identities = 47/202 (23%), Positives = 72/202 (35%), Gaps = 5/202 (2%)
Query: 1788 TTTNNSKPSSLPTLGSNTETVQPEVKSETEPHFILKSSDNTKTYSLMPSAPHPVKEASPG 1847
T+T + + L ++ NT V S + S+ T + S + P
Sbjct: 1329 TSTYSEGRTPLTSIPVNTTLVASSAISILSTTPVDNSTPVTTSTEACSSPTTSEGTSMPN 1388
Query: 1848 FSWSPKTASATPAPLKNDATASCGFSERSSTPHCTMPSGRLSG-ANAAAADGPGIS---Q 1903
+ S T T P+ S S S+TP T G S A ++ GIS
Sbjct: 1389 SNPSEGTTPLTSIPVSTTPVVSSEASTLSATPVDTSTPGTTSAEATSSPTTAEGISIPTS 1448
Query: 1904 LGEVAPLPTLSAPVME-PLINSEPSTGVTEPLTPHQPNHQPSFLTSPQDLASSPMEEDEQ 1962
P S PV P+ NSE ST T P+ + P + ++S A
Sbjct: 1449 TPSEGKTPLKSIPVSNTPVANSEASTLSTTPVDSNSPVVTSTAVSSSPTPAEGTSIAIST 1508
Query: 1963 HSEADEPPSDEPLSDDPLSPAE 1984
SE + P+S ++ +E
Sbjct: 1509 PSEGSTALTSIPVSTTTVASSE 1530
Score = 32.0 bits (71), Expect = 6.7
Identities = 46/186 (24%), Positives = 68/186 (36%), Gaps = 32/186 (17%)
Query: 1787 STTTNNSKP----SSLPTLGSNTETVQPEVKSETEPHF---------ILKSSDNTKTYSL 1833
STT S P +S P L ++T T P + + P ++ T
Sbjct: 3882 STTLPTSFPGASIASTPPLDTST-TFTPSTDTASTPTIPVATTISVSVITEGSTPGTTIF 3940
Query: 1834 MPSAP-----HPVKEASPGFSWSPKTASA---TPAPLKNDATASCGFSERSSTPHCTMPS 1885
+PS P V A+ G +P S TP+ + T S ++ +TP T +
Sbjct: 3941 IPSTPVTSSTADVFPATTGAVSTPVITSTELNTPSTSSSSTTTSFSTTKEFTTPAMTTAA 4000
Query: 1886 GRLSGANAAAADGPGISQLGEVAPLPTLSAPVMEPLINSEPSTGV---TEPLTPHQPNHQ 1942
+ A P + G TLSA S P T T P+TP + +
Sbjct: 4001 PLTYVTMSTAPSTPRTTSRGCTTSASTLSA-------TSTPHTSTSVTTRPVTPSSESSR 4053
Query: 1943 PSFLTS 1948
PS +TS
Sbjct: 4054 PSTITS 4059
>gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo sapiens]
Length = 2524
Score = 43.5 bits (101), Expect = 0.002
Identities = 51/216 (23%), Positives = 81/216 (37%), Gaps = 16/216 (7%)
Query: 1794 KPSSLPTLGSNTETVQPEVKSETEPHFILKSSDNTKTYSLMPSAPHPVK-EASPGFSWSP 1852
KP + L +T + VKSE + + +A +K E G S
Sbjct: 844 KPPAAEELAVDTGKAEEPVKSECTEEAEEGPAKGKDAEAAEATAEGALKAEKKEGGSGRA 903
Query: 1853 KTASATPAPLKNDATASCGFSE------------RSSTPHCTMPSGRLSGANAAAADGPG 1900
TA ++ AP +D++A+C E S P P+G ANA+
Sbjct: 904 TTAKSSGAPQDSDSSATCSADEVDEAEGGDKNRLLSPRPSLLTPTGD-PRANASPQKPLD 962
Query: 1901 ISQLGE-VAPLPTLSAPVMEPLINSEPSTGVTEPLTPHQPNHQPSFLTSPQDLASSPMEE 1959
+ QL + A +P + V EP T P P N QP +PQ SSP +
Sbjct: 963 LKQLKQRAAAIPPIVTKVHEPPREDAAPTKPAPPAPPPPQNLQPES-DAPQQPGSSPRGK 1021
Query: 1960 DEQHSEADEPPSDEPLSDDPLSPAEEKLPHIDEYWS 1995
+ + +++P+ + +KLP W+
Sbjct: 1022 SRSPAPPADKEAEKPVFFPAFAAEAQKLPGDPPCWT 1057
>gi|222418647 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 42.0 bits (97), Expect = 0.006
Identities = 52/222 (23%), Positives = 72/222 (32%), Gaps = 21/222 (9%)
Query: 1835 PSAPHPVKEASPGFSWSPKTASATPAPLKNDATASCGFSERSSTPHCTMPSGRLSGANAA 1894
P P A P S P+T +A P P +A+ SS P T + A
Sbjct: 169 PPTPSATTPAPPSSSAPPETTAAPPTP-----SATTQAPPSSSAPPETTAAPPTPPATTP 223
Query: 1895 AADGPGISQLGEVAPLPTLSAPVMEPLINSEPSTGVTEPLTPHQPNHQPSFLTSPQDLAS 1954
A AP PT SA PL +S P P TP PS ++P + +
Sbjct: 224 APPSSSAPPETTAAP-PTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTA 282
Query: 1955 SPMEEDEQHSEADEPPSDEPLSDDPLSPAEEKLPHIDEYWSDSEHIFLDANIGGVAIAPA 2014
+P P P SPA ++ +S L + + AP
Sbjct: 283 AP------------PTPSATTPAPPSSPAPQETTAAPITTPNSSPTTLAPDTSETSAAPT 330
Query: 2015 HGSVLIECARRELHATTPVEHPNRNHPTRLSLVFYQHKNLNK 2056
H + P P +N +R L Y LN+
Sbjct: 331 H-QTTTSVTTQTTTTKQPTSAPGQNKISRFLL--YMKNLLNR 369
>gi|222418649 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 42.0 bits (97), Expect = 0.006
Identities = 52/222 (23%), Positives = 72/222 (32%), Gaps = 21/222 (9%)
Query: 1835 PSAPHPVKEASPGFSWSPKTASATPAPLKNDATASCGFSERSSTPHCTMPSGRLSGANAA 1894
P P A P S P+T +A P P +A+ SS P T + A
Sbjct: 169 PPTPSATTPAPPSSSAPPETTAAPPTP-----SATTQAPPSSSAPPETTAAPPTPPATTP 223
Query: 1895 AADGPGISQLGEVAPLPTLSAPVMEPLINSEPSTGVTEPLTPHQPNHQPSFLTSPQDLAS 1954
A AP PT SA PL +S P P TP PS ++P + +
Sbjct: 224 APPSSSAPPETTAAP-PTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTA 282
Query: 1955 SPMEEDEQHSEADEPPSDEPLSDDPLSPAEEKLPHIDEYWSDSEHIFLDANIGGVAIAPA 2014
+P P P SPA ++ +S L + + AP
Sbjct: 283 AP------------PTPSATTPAPPSSPAPQETTAAPITTPNSSPTTLAPDTSETSAAPT 330
Query: 2015 HGSVLIECARRELHATTPVEHPNRNHPTRLSLVFYQHKNLNK 2056
H + P P +N +R L Y LN+
Sbjct: 331 H-QTTTSVTTQTTTTKQPTSAPGQNKISRFLL--YMKNLLNR 369
>gi|222418645 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 42.0 bits (97), Expect = 0.006
Identities = 52/222 (23%), Positives = 72/222 (32%), Gaps = 21/222 (9%)
Query: 1835 PSAPHPVKEASPGFSWSPKTASATPAPLKNDATASCGFSERSSTPHCTMPSGRLSGANAA 1894
P P A P S P+T +A P P +A+ SS P T + A
Sbjct: 169 PPTPSATTPAPPSSSAPPETTAAPPTP-----SATTQAPPSSSAPPETTAAPPTPPATTP 223
Query: 1895 AADGPGISQLGEVAPLPTLSAPVMEPLINSEPSTGVTEPLTPHQPNHQPSFLTSPQDLAS 1954
A AP PT SA PL +S P P TP PS ++P + +
Sbjct: 224 APPSSSAPPETTAAP-PTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTA 282
Query: 1955 SPMEEDEQHSEADEPPSDEPLSDDPLSPAEEKLPHIDEYWSDSEHIFLDANIGGVAIAPA 2014
+P P P SPA ++ +S L + + AP
Sbjct: 283 AP------------PTPSATTPAPPSSPAPQETTAAPITTPNSSPTTLAPDTSETSAAPT 330
Query: 2015 HGSVLIECARRELHATTPVEHPNRNHPTRLSLVFYQHKNLNK 2056
H + P P +N +R L Y LN+
Sbjct: 331 H-QTTTSVTTQTTTTKQPTSAPGQNKISRFLL--YMKNLLNR 369
>gi|195963316 PWWP domain containing 2A isoform b [Homo sapiens]
Length = 755
Score = 42.0 bits (97), Expect = 0.006
Identities = 71/320 (22%), Positives = 125/320 (39%), Gaps = 49/320 (15%)
Query: 733 AEKSKNSEVDKKRTKSPKLFVQTVRNGIKHVHCLPAETNVSFKKFNIEEFGKTLENNSYK 792
A S E K+R +S V TV +K H + + +K N + ++ +
Sbjct: 342 ATDSSKYEDKKRRNES----VTTVNKKLKTDHKVDGKNQNESQKRNAVVKVSNIAHSRGR 397
Query: 793 FLKDTANHKNAMSSVAT-----DMSCDHLKGRSNVLVFQ---QPGFNCSSIPHSSHSIIN 844
+K +A + + ++T + DH K R + + + Q N +S ++HS ++
Sbjct: 398 VVKVSAQANTSKAQLSTKKVLQSKNMDHAKAREVLKIAKEKAQKKQNETSTSKNAHSKVH 457
Query: 845 HHASIHN--EGDQPKTPENIPSK---EPKDGSPVQPSLLSLMKDRRLTLEQVVAIEALTQ 899
N G P P + E D S + L M+ ++ + +
Sbjct: 458 FTRRYQNPSSGSLPPRVRLKPQRYRNEENDSS--LKTGLEKMRSGKMAPKPQSRCTSTRS 515
Query: 900 LSEAPSENSSPSKSEKDEESEQRTASLLNSCKAILYTVRKDLQDPNLQGEPPKLNHCP-- 957
EAPSEN SPSK ++ SE + + ++ V D +P G+ N+
Sbjct: 516 AGEAPSENQSPSKGPEEASSEVQDTNEVH--------VPGDQDEPQTLGKKGSKNNISVY 567
Query: 958 ---SLEKQSSCNTVVFNGQTT---TLSNSHINS--------------ATNQASTKSHEYS 997
+ +K S + V + +T SNS +S +T+ S+ S E
Sbjct: 568 MTLNQKKSDSSSASVCSIDSTDDLKSSNSECSSSESFDFPPGSMHAPSTSSTSSSSKEEK 627
Query: 998 KVTNSLSLFIPKSNSSKIDT 1017
K++NSL + + N SK T
Sbjct: 628 KLSNSLKMKVFSKNVSKCVT 647
>gi|21464115 methyl-CpG binding domain protein 1 isoform 2 [Homo
sapiens]
Length = 586
Score = 41.6 bits (96), Expect = 0.008
Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 9/94 (9%)
Query: 567 PMVSTSSSSYTTLLPTLEKKKRKRCGVCEPCQQKTNCGECTYCKNR------KNSHQICK 620
P + S T P +++ ++CG C C ++ +CG C +C ++ Q C+
Sbjct: 291 PPPPSQSPEPTEPQPYTNRRQNRKCGACAACLRRMDCGRCDFCCDKPKFGGSNQKRQKCR 350
Query: 621 KRKCEELKKK---PSVVVPLEVIKENKRPQREKK 651
R+C + K PSV E + P R +K
Sbjct: 351 WRQCLQFAMKRLLPSVWSESEDGAGSPPPYRRRK 384
Score = 32.7 bits (73), Expect = 3.9
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 586 KKRKRCGVCEPCQQKTNCGECTYC 609
++ + CGVC CQ + +CG C C
Sbjct: 220 ERSRGCGVCRGCQTQEDCGHCPIC 243
Score = 31.6 bits (70), Expect = 8.7
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 8/45 (17%)
Query: 587 KRKRCGVCEPCQQKTNCGECTYCKNRKNSHQI-------CKKRKC 624
KR CG C CQ +CG C+ C + H + C++R+C
Sbjct: 172 KRVGCGECAACQVTEDCGACSTCL-LQLPHDVASGLFCKCERRRC 215
>gi|21464119 methyl-CpG binding domain protein 1 isoform PCM1 [Homo
sapiens]
Length = 556
Score = 41.6 bits (96), Expect = 0.008
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 579 LLPTLEKKKRKRCGVCEPCQQKTNCGECTYCKNR------KNSHQICKKRKCEELKKK-- 630
L P +++ ++CG C C ++ +CG C +C ++ Q C+ R+C + K
Sbjct: 277 LQPYTNRRQNRKCGACAACLRRMDCGRCDFCCDKPKFGGSNQKRQKCRWRQCLQFAMKRL 336
Query: 631 -PSVVVPLEVIKENKRPQREKK 651
PSV E + P R +K
Sbjct: 337 LPSVWSESEDGAGSPPPYRRRK 358
Score = 33.5 bits (75), Expect = 2.3
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 587 KRKRCGVCEPCQQKTNCGECTYC 609
K + CGVC CQ + +CG C C
Sbjct: 172 KSRGCGVCRGCQTQEDCGHCPIC 194
>gi|21464117 methyl-CpG binding domain protein 1 isoform 1 [Homo
sapiens]
Length = 605
Score = 41.6 bits (96), Expect = 0.008
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 579 LLPTLEKKKRKRCGVCEPCQQKTNCGECTYCKNR------KNSHQICKKRKCEELKKK-- 630
L P +++ ++CG C C ++ +CG C +C ++ Q C+ R+C + K
Sbjct: 326 LQPYTNRRQNRKCGACAACLRRMDCGRCDFCCDKPKFGGSNQKRQKCRWRQCLQFAMKRL 385
Query: 631 -PSVVVPLEVIKENKRPQREKK 651
PSV E + P R +K
Sbjct: 386 LPSVWSESEDGAGSPPPYRRRK 407
Score = 32.7 bits (73), Expect = 3.9
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 586 KKRKRCGVCEPCQQKTNCGECTYC 609
++ + CGVC CQ + +CG C C
Sbjct: 220 ERSRGCGVCRGCQTQEDCGHCPIC 243
Score = 31.6 bits (70), Expect = 8.7
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 8/45 (17%)
Query: 587 KRKRCGVCEPCQQKTNCGECTYCKNRKNSHQI-------CKKRKC 624
KR CG C CQ +CG C+ C + H + C++R+C
Sbjct: 172 KRVGCGECAACQVTEDCGACSTCL-LQLPHDVASGLFCKCERRRC 215
>gi|239743291 PREDICTED: mucin 3A, intestinal [Homo sapiens]
Length = 1486
Score = 41.2 bits (95), Expect = 0.011
Identities = 60/287 (20%), Positives = 105/287 (36%), Gaps = 32/287 (11%)
Query: 1773 VEKKPIPRIKRKNNSTTTNN------SKPSSLPTLGSNTETVQPEVKSETEPHFILKSSD 1826
V +KP+ + + TTT S PS+ + TV P S T+ F S
Sbjct: 162 VTQKPVTTVTSTYSMTTTEKGTSAMTSSPSTTTARETPIVTVTPSSVSATDTTFHTTISS 221
Query: 1827 NTKTYSLMP---SAPHPVKEASPGFSWSPKTASATPAPLKNDATA-------SCGFSERS 1876
T+T P + H +P F+ + KTA + +P+ + T+ + S+ +
Sbjct: 222 TTRTTERTPLPTGSIHTTTSPTPVFT-TLKTAVTSTSPITSSITSTNTVTSMTTTASQPT 280
Query: 1877 STPHCTMPSGRLSGANAAAADGPGISQLGEVAPLPTLSAPVMEPLINSEPSTGVTEPLTP 1936
+T + P+ + + + S + PL TL + + S P++ T P +P
Sbjct: 281 ATNTLSSPTRTILSSTPVLSTETITSGITNTTPLSTLVTTLPTTISRSTPTSETTYPTSP 340
Query: 1937 HQPNHQPSFLTSPQDLASSPMEEDEQHSEADEPP--SDEPLSDDPLSPAEEKLPHIDEYW 1994
+ S +A S +E PP S P ++ +P + E
Sbjct: 341 -----TSTVTDSTTKIAYSTSMTGTLSTETSLPPTSSSLPTTETATTPMTNLVTTTTEIS 395
Query: 1995 SDSEHIFLDANIGGVAIAPAHGSVLIECARRELHATTPVEHPNRNHP 2041
S S F + I + +V R + T E P+ + P
Sbjct: 396 SHSTPSFSSSTI--------YSTVTSHSTPRFTSSITTTETPSHSTP 434
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 41.2 bits (95), Expect = 0.011
Identities = 62/219 (28%), Positives = 84/219 (38%), Gaps = 28/219 (12%)
Query: 383 PVHGEALGETPDLPEIPGAIPV--QGEVFGTILDQQETLGMS---GSVVP-DLPVFLPVP 436
P L P L PGA PV + ++ T G S S VP PV P
Sbjct: 1600 PSPAPPLAPLPVLAPSPGAAPVLASSQTPVPVMAPSSTPGTSLASASPVPAPTPVLAPSS 1659
Query: 437 PNPIATFNAPSKWPEPQSTVSYGLAV--------QGAIQILPLGSGHTPQSSSNSEKNSL 488
+ PS P P ST + LA Q L LG+G+ PQ ++ SL
Sbjct: 1660 TQTMLPAPVPSPLPSPASTQTLALAPALAPTLGGSSPSQTLSLGTGN-PQGPFPTQTLSL 1718
Query: 489 PPVMAISNVENEKQVHISFLPANTQGFPLAPERGLFHA-SLGIAQLSQAGPSKSDR---- 543
P A S V Q +S P G PL P + L A + +A S GP+ +
Sbjct: 1719 TP--ASSLVPTPAQT-LSLAP----GPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTLA 1771
Query: 544 -GSSQVSVTSTVHVVNTTVVTMPVPMVSTSSSSYTTLLP 581
SS S+ + V T+ PVP + +++ L P
Sbjct: 1772 PASSSASLLAPASVQTLTLSPAPVPTLGPAAAQTLALAP 1810
Score = 32.7 bits (73), Expect = 3.9
Identities = 36/141 (25%), Positives = 44/141 (31%), Gaps = 22/141 (15%)
Query: 1829 KTYSLMPSAPHPVKEASPGFSWSPKTASATPAPLKNDATASCGFSERSSTPHCTMPSGRL 1888
K SL PSAP EA S AP + T E P C S L
Sbjct: 2598 KNLSLTPSAPSLTLEAG-----SIPNGQEQEAPDSAEGTTLTVLPEGEELPLCVSESNGL 2652
Query: 1889 SGANAAAADGPGISQLGEVAPLPTLSAPVMEPLINSEPSTGVTEPLTPHQPNHQPSFLTS 1948
+AA+D P+ EPL S +TE TP +P L +
Sbjct: 2653 ELPPSAASD-----------------EPLQEPLEADRTSEELTEAKTPTSSPEKPQELVT 2695
Query: 1949 PQDLASSPMEEDEQHSEADEP 1969
+ A S E P
Sbjct: 2696 AEVAAPSTSSSATSSPEGPSP 2716
Score = 32.3 bits (72), Expect = 5.1
Identities = 70/283 (24%), Positives = 100/283 (35%), Gaps = 41/283 (14%)
Query: 1731 SGAIEVLAPRRKKRTCFTQPVPRSGKKRAAMMTEVLAHKIRAVEKKPIPRIKRK--NNST 1788
SG VL PR T P P G RA M T L + + P P + +
Sbjct: 1336 SGLPAVLNPR-PTLTPGRLPTPTLGTARAPMPTPTLVRPLLKLVHSPSPEVSASAPGAAP 1394
Query: 1789 TTNNSK---PSSLPTLGS------NTETVQPEVKSETEPHFILKSSDNTKTYSLMP---- 1835
T +S PSSLP S N+ + V S L SS + +P
Sbjct: 1395 LTISSPLHVPSSLPGPASSPMPIPNSSPLASPVSSTVS--VPLSSSLPISVPTTLPAPAS 1452
Query: 1836 -------SAPHPVKEASPGF--SWSPKTASATPAPLKNDATASCGFSERSSTPHCTMPSG 1886
SAP V + P S +P A PA + A G S +S + G
Sbjct: 1453 APLTIPISAPLTVSASGPALLTSVTPPLAPVVPAAPGPPSLAPSGASPSAS----ALTLG 1508
Query: 1887 RLSGANAAAADGPGISQL-----GEVAPLPTLSAPVMEPLINSEPSTGVTEPLTPHQPNH 1941
+ + +++ PG L V L + AP P++ P++ + P P PN
Sbjct: 1509 LATAPSLSSSQTPGHPLLLAPTSSHVPGLNSTVAPACSPVL--VPASALASPF-PSAPNP 1565
Query: 1942 QP--SFLTSPQDLASSPMEEDEQHSEADEPPSDEPLSDDPLSP 1982
P + L +P AS + A + P PL+P
Sbjct: 1566 APAQASLLAPASSASQALATPLAPMAAPQTAILAPSPAPPLAP 1608
>gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sapiens]
Length = 1758
Score = 40.8 bits (94), Expect = 0.014
Identities = 84/396 (21%), Positives = 137/396 (34%), Gaps = 54/396 (13%)
Query: 532 QLSQAGPSKSDRGSSQVSVTSTVHVVNTTVVTMPVPMVSTSSSSYTTLLPTLEKKKRKRC 591
+L++ G KS SS+ + TS H ST +SS P +KK
Sbjct: 1399 RLNEQGNFKSLSQSSKEARTSDKHD-------------STRASSNKDFTPNRDKKTDYDT 1445
Query: 592 GVCEPCQQKTNCGECTYCKNRKN------SHQICKKRKCEELKKKPSVVVPLEVIKENKR 645
+++ E T K+ + S Q K R+ +L KK + + K N
Sbjct: 1446 REYSSSKRRDEKNELTRRKDSPSRNKDSASGQKNKPREERDLPKKGTG----DSKKSNSS 1501
Query: 646 PQREKKPKVLKADFDNKPVNGPKSESMDYSRCGHGEEQKLELNPHTVENVTKNEDSMTGI 705
P R++KP KA +D K N +++S+D + C E+ LE N + + + I
Sbjct: 1502 PSRDRKPHDHKATYDTKRPN-EETKSVDKNPCKDREKHVLEAR----NNKESSGNKLLYI 1556
Query: 706 EVEKWTQNKKSQLTDHVKGDFSANVPEAEKSKNSEVDKKRTKSPKLFVQTVRNGIKHVHC 765
TQ +K Q+T + P+ S D R F
Sbjct: 1557 LNPPETQVEKEQITGQIDKSTVKPKPQLSHSSRLSSDLTRETDEAAFEPDYNES------ 1610
Query: 766 LPAETNVSFKKFNIEEFGKTLENNSYKFLKDTANHKNAMSSVATDMSCDHLKGRSNVLVF 825
+E+NVS K+ E +S KD + + + D + G S
Sbjct: 1611 -DSESNVSVKE----------EESSGNISKDLKDKIVEKAKESLDTAAVVQVGISRNQSH 1659
Query: 826 QQPGFNCSSIPHSSHSIINHHASIHNEGDQPKTPENIPSKEPKDGSPVQPSLLSLMKDRR 885
P + S S S H+S + + + + KE K +
Sbjct: 1660 SSPSVSPSRSHSPSGSQTRSHSSSASSAESQDSKKKKKKKEKKKHK---------KHKKH 1710
Query: 886 LTLEQVVAIEALTQLSEAPSENSSPSKSEKDEESEQ 921
++ E + S+ SK KD+E E+
Sbjct: 1711 KKHKKHAGTEVELEKSQKHKHKKKKSKKNKDKEKEK 1746
Score = 37.0 bits (84), Expect = 0.21
Identities = 122/600 (20%), Positives = 209/600 (34%), Gaps = 105/600 (17%)
Query: 620 KKRKCEELKKKPSVVVPLEVIKENKRPQREKKPK----VLKADFDNKPVNGPKSESMDYS 675
+K + KK ++V P + +E +RE+ P+ + KA + + KS S
Sbjct: 987 RKNDGSAVSKKENIVKPAKGPQEKVDGERERSPRSEPPIKKAKEETPKTDNTKSSSSSQK 1046
Query: 676 --------RCGHGEEQKLELNPHTVENVTKNEDSMTGIEVEKWTQNKKSQLTDHVKGDFS 727
R H + K V+ +D ++ EK T ++ + K
Sbjct: 1047 DEKITGTPRKAHSKSAKEHQETKPVKEEKVKKDYSKDVKSEKLTTKEEKAKKPNEKNKPL 1106
Query: 728 ANVPEAEKSKNSE--VDKK-RTKSPKLFVQTVRNGIK------------HVHCLPAETNV 772
N E K K E VDK + S K+ V +K + P + +
Sbjct: 1107 DNKGEKRKRKTEEKGVDKDFESSSMKISKLEVTEIVKPSPKRKMEPDTEKMDRTPEKDKI 1166
Query: 773 SF----KKFNIE-EFGKTLENNSYKFLKDTANHKNAMSSVATDMSCDHLKGRSNVLVFQQ 827
S KK + E GK + S + + +T + S ++ + + +KG+ V
Sbjct: 1167 SLSAPAKKIKLNRETGKKI--GSTENISNTKEPSEKLESTSSKVKQEKVKGKVRRKVTGT 1224
Query: 828 PGFNCSSIPHSSHSIINHHASIHNEGDQP--KTPENIPSKEPKDGSPVQPSLLSLMKDRR 885
G + + + ++S S + G P K+ E +K V ++ D
Sbjct: 1225 EGSSSTLVDYTSTS---------STGGSPVRKSEEKTDTKRT-----VIKTMEEYNNDNT 1270
Query: 886 LTLEQVVAIEALTQLSEAPSENSSPSKSEKDEESEQRTASLLNSCKAILYTVRKDLQDPN 945
E V+ + Q+ ++ + E+D +S Q +S+ I N
Sbjct: 1271 APAEDVII---MIQVPQSKWDKDDFESEEEDVKSTQPISSVGKPASVI----------KN 1317
Query: 946 LQGEPPKLNHCPSLEKQSSCNTVVFNGQTTTLSNSH-INSATNQAS-----TKSHEYSKV 999
+ +P + P E + S F + H + S+ N AS TK +YS
Sbjct: 1318 VSTKPSNIVKYPEKESEPSEKIQKFTKDVSHEIIQHEVKSSKNSASSEKGKTKDRDYS-- 1375
Query: 1000 TNSLSLFIPKSNSSKIDTNKSIAQGIITLDNCSNDLHQLPPRNNEVEYCNQLLDSSKKLD 1059
+ K N K N + + LD R NE L SSK+
Sbjct: 1376 ------VLEKENPEK-RKNSTQPEKESNLD-----------RLNEQGNFKSLSQSSKEAR 1417
Query: 1060 SDDLSCQDATHTQIEEDVATQLTQLASIIKINYI--KPEDKKVESTPTSLVTCNVQQKYN 1117
+ D D+T +D + Y K D+K E T N
Sbjct: 1418 TSDK--HDSTRASSNKDFTPNRDKKTDYDTREYSSSKRRDEKNELTRRK-----DSPSRN 1470
Query: 1118 QEKGTIQQKPPSSVHNNHGSSLTKQKNPTQKKTKSTPSRDRR--KKKPTVVSYQENDRQK 1175
++ + Q+ P + L K+ KK+ S+PSRDR+ K T + + N+ K
Sbjct: 1471 KDSASGQKNKPREERD-----LPKKGTGDSKKSNSSPSRDRKPHDHKATYDTKRPNEETK 1525
>gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sapiens]
Length = 1792
Score = 40.8 bits (94), Expect = 0.014
Identities = 84/396 (21%), Positives = 137/396 (34%), Gaps = 54/396 (13%)
Query: 532 QLSQAGPSKSDRGSSQVSVTSTVHVVNTTVVTMPVPMVSTSSSSYTTLLPTLEKKKRKRC 591
+L++ G KS SS+ + TS H ST +SS P +KK
Sbjct: 1433 RLNEQGNFKSLSQSSKEARTSDKHD-------------STRASSNKDFTPNRDKKTDYDT 1479
Query: 592 GVCEPCQQKTNCGECTYCKNRKN------SHQICKKRKCEELKKKPSVVVPLEVIKENKR 645
+++ E T K+ + S Q K R+ +L KK + + K N
Sbjct: 1480 REYSSSKRRDEKNELTRRKDSPSRNKDSASGQKNKPREERDLPKKGTG----DSKKSNSS 1535
Query: 646 PQREKKPKVLKADFDNKPVNGPKSESMDYSRCGHGEEQKLELNPHTVENVTKNEDSMTGI 705
P R++KP KA +D K N +++S+D + C E+ LE N + + + I
Sbjct: 1536 PSRDRKPHDHKATYDTKRPN-EETKSVDKNPCKDREKHVLEAR----NNKESSGNKLLYI 1590
Query: 706 EVEKWTQNKKSQLTDHVKGDFSANVPEAEKSKNSEVDKKRTKSPKLFVQTVRNGIKHVHC 765
TQ +K Q+T + P+ S D R F
Sbjct: 1591 LNPPETQVEKEQITGQIDKSTVKPKPQLSHSSRLSSDLTRETDEAAFEPDYNES------ 1644
Query: 766 LPAETNVSFKKFNIEEFGKTLENNSYKFLKDTANHKNAMSSVATDMSCDHLKGRSNVLVF 825
+E+NVS K+ E +S KD + + + D + G S
Sbjct: 1645 -DSESNVSVKE----------EESSGNISKDLKDKIVEKAKESLDTAAVVQVGISRNQSH 1693
Query: 826 QQPGFNCSSIPHSSHSIINHHASIHNEGDQPKTPENIPSKEPKDGSPVQPSLLSLMKDRR 885
P + S S S H+S + + + + KE K +
Sbjct: 1694 SSPSVSPSRSHSPSGSQTRSHSSSASSAESQDSKKKKKKKEKKKHK---------KHKKH 1744
Query: 886 LTLEQVVAIEALTQLSEAPSENSSPSKSEKDEESEQ 921
++ E + S+ SK KD+E E+
Sbjct: 1745 KKHKKHAGTEVELEKSQKHKHKKKKSKKNKDKEKEK 1780
Score = 37.0 bits (84), Expect = 0.21
Identities = 122/600 (20%), Positives = 209/600 (34%), Gaps = 105/600 (17%)
Query: 620 KKRKCEELKKKPSVVVPLEVIKENKRPQREKKPK----VLKADFDNKPVNGPKSESMDYS 675
+K + KK ++V P + +E +RE+ P+ + KA + + KS S
Sbjct: 1021 RKNDGSAVSKKENIVKPAKGPQEKVDGERERSPRSEPPIKKAKEETPKTDNTKSSSSSQK 1080
Query: 676 --------RCGHGEEQKLELNPHTVENVTKNEDSMTGIEVEKWTQNKKSQLTDHVKGDFS 727
R H + K V+ +D ++ EK T ++ + K
Sbjct: 1081 DEKITGTPRKAHSKSAKEHQETKPVKEEKVKKDYSKDVKSEKLTTKEEKAKKPNEKNKPL 1140
Query: 728 ANVPEAEKSKNSE--VDKK-RTKSPKLFVQTVRNGIK------------HVHCLPAETNV 772
N E K K E VDK + S K+ V +K + P + +
Sbjct: 1141 DNKGEKRKRKTEEKGVDKDFESSSMKISKLEVTEIVKPSPKRKMEPDTEKMDRTPEKDKI 1200
Query: 773 SF----KKFNIE-EFGKTLENNSYKFLKDTANHKNAMSSVATDMSCDHLKGRSNVLVFQQ 827
S KK + E GK + S + + +T + S ++ + + +KG+ V
Sbjct: 1201 SLSAPAKKIKLNRETGKKI--GSTENISNTKEPSEKLESTSSKVKQEKVKGKVRRKVTGT 1258
Query: 828 PGFNCSSIPHSSHSIINHHASIHNEGDQP--KTPENIPSKEPKDGSPVQPSLLSLMKDRR 885
G + + + ++S S + G P K+ E +K V ++ D
Sbjct: 1259 EGSSSTLVDYTSTS---------STGGSPVRKSEEKTDTKRT-----VIKTMEEYNNDNT 1304
Query: 886 LTLEQVVAIEALTQLSEAPSENSSPSKSEKDEESEQRTASLLNSCKAILYTVRKDLQDPN 945
E V+ + Q+ ++ + E+D +S Q +S+ I N
Sbjct: 1305 APAEDVII---MIQVPQSKWDKDDFESEEEDVKSTQPISSVGKPASVI----------KN 1351
Query: 946 LQGEPPKLNHCPSLEKQSSCNTVVFNGQTTTLSNSH-INSATNQAS-----TKSHEYSKV 999
+ +P + P E + S F + H + S+ N AS TK +YS
Sbjct: 1352 VSTKPSNIVKYPEKESEPSEKIQKFTKDVSHEIIQHEVKSSKNSASSEKGKTKDRDYS-- 1409
Query: 1000 TNSLSLFIPKSNSSKIDTNKSIAQGIITLDNCSNDLHQLPPRNNEVEYCNQLLDSSKKLD 1059
+ K N K N + + LD R NE L SSK+
Sbjct: 1410 ------VLEKENPEK-RKNSTQPEKESNLD-----------RLNEQGNFKSLSQSSKEAR 1451
Query: 1060 SDDLSCQDATHTQIEEDVATQLTQLASIIKINYI--KPEDKKVESTPTSLVTCNVQQKYN 1117
+ D D+T +D + Y K D+K E T N
Sbjct: 1452 TSDK--HDSTRASSNKDFTPNRDKKTDYDTREYSSSKRRDEKNELTRRK-----DSPSRN 1504
Query: 1118 QEKGTIQQKPPSSVHNNHGSSLTKQKNPTQKKTKSTPSRDRR--KKKPTVVSYQENDRQK 1175
++ + Q+ P + L K+ KK+ S+PSRDR+ K T + + N+ K
Sbjct: 1505 KDSASGQKNKPREERD-----LPKKGTGDSKKSNSSPSRDRKPHDHKATYDTKRPNEETK 1559
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.127 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,800,656
Number of Sequences: 37866
Number of extensions: 4557295
Number of successful extensions: 16190
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 320
Number of HSP's that attempted gapping in prelim test: 14844
Number of HSP's gapped (non-prelim): 1676
length of query: 2136
length of database: 18,247,518
effective HSP length: 118
effective length of query: 2018
effective length of database: 13,779,330
effective search space: 27806687940
effective search space used: 27806687940
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 70 (31.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.