Guide to the Human Genome
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Name: MYOM2 Sequence: fasta or formatted (1465aa) NCBI GI: 156104903
Description:

myomesin 2

Referenced in:

Muscle

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         95           3
 C cysteine            1.8         27           2
 D aspartate           6.2         91           2
 E glutamate           7.7        113           2
 F phenylalanine       4.0         58           2
 G glycine             6.3         93           2
 H histidine           2.5         37           2
 I isoleucine          4.5         66           2
 K lysine              6.4         94           2
 L leucine             7.2        106           2
 M methionine          1.9         28           2
 N asparagine          3.1         45           2
 P proline             4.8         71           2
 Q glutamine           4.0         59           2
 R arginine            5.6         82           2
 S serine              8.1        119           3
 T threonine           5.7         83           3
 V valine              8.3        122           3
 W tryptophan          1.6         23           1
 Y tyrosine            3.6         53           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myomesin 2 
MYOM1                 0.446   myomesin 1 isoform b 
MYOM3                 0.371   myomesin family, member 3 
MYOM1                 0.284   myomesin 1 isoform a 
TTN                   0.083   titin isoform N2-A 
TTN                   0.083   titin isoform novex-2 
TTN                   0.083   titin isoform novex-1 
TTN                   0.083   titin isoform N2-B 
IGSF22                0.048   immunoglobulin superfamily, member 22 
IGFN1                 0.044   immunoglobulin-like and fibronectin type III domain...
MYBPC1                0.038   myosin binding protein C, slow type isoform 4 
MYBPC1                0.038   myosin binding protein C, slow type isoform 2 
MYBPC1                0.038   myosin binding protein C, slow type isoform 1 
MYBPC2                0.036   myosin binding protein C, fast type 
SDK2                  0.035   sidekick 2 
MYBPC3                0.034   myosin binding protein C, cardiac 
MYBPC1                0.034   myosin binding protein C, slow type isoform 3 
ROBO2                 0.029   roundabout, axon guidance receptor, homolog 2 isofo...
ROBO2                 0.029   roundabout, axon guidance receptor, homolog 2 isofor...
ROBO3                 0.028   roundabout, axon guidance receptor, homolog 3 
ROBO1                 0.026   roundabout 1 isoform d 
ROBO1                 0.026   roundabout 1 isoform c 
LOC642132             0.026   PREDICTED: similar to roundabout 1 isoform 1 
LOC642132             0.026   PREDICTED: similar to roundabout 1 isoform 2 
SDK1                  0.025   sidekick 1 
ROBO1                 0.025   roundabout 1 isoform b 
ROBO1                 0.025   roundabout 1 isoform a 
PTPRS                 0.024   protein tyrosine phosphatase, receptor type, sigma ...
NEO1                  0.024   neogenin homolog 1 
PTPRS                 0.023   protein tyrosine phosphatase, receptor type, sigma ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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