LOC642132 19495

Name: LOC642132	Sequence: fasta or formatted (1615aa)		NCBI GI: 239748171
Description: PREDICTED: similar to roundabout 1 isoform 2		Referenced in: Neurons
Other entries for this name: alt prot [1562aa] PREDICTED: similar to roundabout 1 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.7 109 4 C cysteine 1.4 22 2 D aspartate 5.6 91 2 E glutamate 6.2 100 4 F phenylalanine 2.2 36 2 G glycine 7.2 117 2 H histidine 1.9 31 1 I isoleucine 4.1 66 2 K lysine 4.4 71 2 L leucine 5.8 94 3 M methionine 1.7 28 1 N asparagine 4.8 78 2 P proline 8.9 143 5 Q glutamine 5.3 86 2 R arginine 5.9 96 3 S serine 9.5 153 5 T threonine 6.4 104 2 V valine 7.6 123 3 W tryptophan 1.2 19 1 Y tyrosine 3.0 48 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to roundabout 1 isoform 2 ROBO1 0.995 roundabout 1 isoform b ROBO1 0.991 roundabout 1 isoform c ROBO1 0.984 roundabout 1 isoform a LOC642132 0.952 PREDICTED: similar to roundabout 1 isoform 1 ROBO1 0.941 roundabout 1 isoform d ROBO2 0.419 roundabout, axon guidance receptor, homolog 2 isofo... ROBO2 0.419 roundabout, axon guidance receptor, homolog 2 isofor... ROBO3 0.285 roundabout, axon guidance receptor, homolog 3 DSCAML1 0.064 Down syndrome cell adhesion molecule like 1 DSCAM 0.062 Down syndrome cell adhesion molecule isoform CHD2-42... HMCN1 0.059 hemicentin 1 NEO1 0.059 neogenin homolog 1 CNTN5 0.058 contactin 5 isoform short CNTN5 0.058 contactin 5 isoform long CNTN4 0.056 contactin 4 isoform a precursor HMCN2 0.055 PREDICTED: hemicentin 2 HMCN2 0.055 PREDICTED: hemicentin 2 HMCN2 0.055 PREDICTED: hemicentin 2 SDK2 0.055 sidekick 2 SDK1 0.054 sidekick 1 DCC 0.054 deleted in colorectal carcinoma CNTN3 0.054 contactin 3 PXDN 0.054 peroxidasin L1CAM 0.053 L1 cell adhesion molecule isoform 3 precursor [Homo... L1CAM 0.053 L1 cell adhesion molecule isoform 2 precursor L1CAM 0.053 L1 cell adhesion molecule isoform 1 precursor ROBO4 0.051 roundabout homolog 4, magic roundabout CNTN6 0.050 contactin 6 PXDNL 0.050 peroxidasin homolog-like Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.