ROBO1 11477

Name: ROBO1	Sequence: fasta or formatted (1612aa)		NCBI GI: 19743806
Description: roundabout 1 isoform b		Referenced in: Neurons
Other entries for this name: alt prot [1606aa] roundabout 1 isoform c alt prot [1551aa] roundabout 1 isoform d alt prot [1651aa] roundabout 1 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.8 109 4 C cysteine 1.4 22 2 D aspartate 5.7 92 2 E glutamate 6.2 100 4 F phenylalanine 2.2 36 2 G glycine 7.1 115 2 H histidine 1.9 31 1 I isoleucine 4.1 66 2 K lysine 4.4 71 2 L leucine 5.8 94 3 M methionine 1.8 29 1 N asparagine 4.8 78 2 P proline 8.9 143 5 Q glutamine 5.3 86 2 R arginine 6.0 96 3 S serine 9.4 152 5 T threonine 6.4 103 2 V valine 7.6 122 3 W tryptophan 1.2 19 1 Y tyrosine 3.0 48 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 roundabout 1 isoform b LOC642132 0.997 PREDICTED: similar to roundabout 1 isoform 2 ROBO1 0.990 roundabout 1 isoform c ROBO1 0.988 roundabout 1 isoform a LOC642132 0.949 PREDICTED: similar to roundabout 1 isoform 1 ROBO1 0.941 roundabout 1 isoform d ROBO2 0.421 roundabout, axon guidance receptor, homolog 2 isofo... ROBO2 0.421 roundabout, axon guidance receptor, homolog 2 isofor... ROBO3 0.287 roundabout, axon guidance receptor, homolog 3 DSCAML1 0.065 Down syndrome cell adhesion molecule like 1 DSCAM 0.063 Down syndrome cell adhesion molecule isoform CHD2-42... NEO1 0.061 neogenin homolog 1 HMCN1 0.060 hemicentin 1 CNTN5 0.060 contactin 5 isoform short CNTN5 0.060 contactin 5 isoform long HMCN2 0.056 PREDICTED: hemicentin 2 HMCN2 0.056 PREDICTED: hemicentin 2 HMCN2 0.056 PREDICTED: hemicentin 2 CNTN4 0.056 contactin 4 isoform a precursor PXDN 0.056 peroxidasin SDK2 0.055 sidekick 2 L1CAM 0.055 L1 cell adhesion molecule isoform 3 precursor [Homo... L1CAM 0.055 L1 cell adhesion molecule isoform 2 precursor L1CAM 0.055 L1 cell adhesion molecule isoform 1 precursor CNTN3 0.055 contactin 3 SDK1 0.055 sidekick 1 DCC 0.054 deleted in colorectal carcinoma CNTN6 0.052 contactin 6 PXDNL 0.052 peroxidasin homolog-like ROBO4 0.051 roundabout homolog 4, magic roundabout Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.