Guide to the Human Genome
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Name: MYBPC3 Sequence: fasta or formatted (1274aa) NCBI GI: 148596957
Description:

myosin binding protein C, cardiac

Referenced in:

Myosin

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0        102           2
 C cysteine            1.6         21           2
 D aspartate           5.7         72           2
 E glutamate           7.8        100           2
 F phenylalanine       3.4         43           1
 G glycine             7.5         96           3
 H histidine           1.8         23           2
 I isoleucine          4.3         55           2
 K lysine              6.7         85           4
 L leucine             7.5         96           2
 M methionine          1.7         22           1
 N asparagine          2.2         28           1
 P proline             7.3         93           2
 Q glutamine           3.8         49           1
 R arginine            6.0         77           2
 S serine              6.1         78           3
 T threonine           5.7         72           3
 V valine              8.8        112           3
 W tryptophan          1.5         19           1
 Y tyrosine            2.4         31           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myosin binding protein C, cardiac 
MYBPC2                0.470   myosin binding protein C, fast type 
MYBPC1                0.441   myosin binding protein C, slow type isoform 4 
MYBPC1                0.439   myosin binding protein C, slow type isoform 2 
MYBPC1                0.439   myosin binding protein C, slow type isoform 1 
MYBPC1                0.436   myosin binding protein C, slow type isoform 3 
MYBPH                 0.160   myosin binding protein H 
MYBPHL                0.125   myosin binding protein H-like 
TTN                   0.102   titin isoform N2-A 
TTN                   0.102   titin isoform novex-2 
TTN                   0.102   titin isoform novex-1 
TTN                   0.102   titin isoform N2-B 
IGSF22                0.099   immunoglobulin superfamily, member 22 
IGFN1                 0.083   immunoglobulin-like and fibronectin type III domain...
OBSCN                 0.049   obscurin, cytoskeletal calmodulin and titin-interact...
OBSCN                 0.049   obscurin, cytoskeletal calmodulin and titin-interac...
MYOM1                 0.043   myomesin 1 isoform b 
MYOM2                 0.040   myomesin 2 
OBSL1                 0.039   obscurin-like 1 
MYOM3                 0.037   myomesin family, member 3 
TTN                   0.036   titin isoform novex-3 
MYOM1                 0.035   myomesin 1 isoform a 
HMCN1                 0.034   hemicentin 1 
ROBO2                 0.033   roundabout, axon guidance receptor, homolog 2 isofo...
ROBO2                 0.033   roundabout, axon guidance receptor, homolog 2 isofor...
HMCN2                 0.033   PREDICTED: hemicentin 2 
HMCN2                 0.033   PREDICTED: hemicentin 2 
HMCN2                 0.033   PREDICTED: hemicentin 2 
MYLK                  0.032   myosin light chain kinase isoform 3A 
MYLK                  0.032   myosin light chain kinase isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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