Guide to the Human Genome
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Name: MYOM3 Sequence: fasta or formatted (1437aa) NCBI GI: 155969693
Description:

myomesin family, member 3

Referenced in:

Muscle

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         93           3
 C cysteine            1.4         20           1
 D aspartate           5.7         82           3
 E glutamate           9.0        130           3
 F phenylalanine       3.4         49           2
 G glycine             6.7         96           3
 H histidine           1.8         26           1
 I isoleucine          4.7         67           2
 K lysine              6.1         88           3
 L leucine             8.4        120           2
 M methionine          1.3         18           1
 N asparagine          2.4         34           2
 P proline             6.1         88           3
 Q glutamine           3.9         56           2
 R arginine            7.2        104           3
 S serine              7.5        108           2
 T threonine           6.3         91           2
 V valine              6.7         96           2
 W tryptophan          2.0         29           1
 Y tyrosine            2.9         42           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myomesin family, member 3 
MYOM2                 0.378   myomesin 2 
MYOM1                 0.348   myomesin 1 isoform b 
MYOM1                 0.250   myomesin 1 isoform a 
TTN                   0.086   titin isoform N2-A 
TTN                   0.086   titin isoform novex-2 
TTN                   0.086   titin isoform novex-1 
TTN                   0.086   titin isoform N2-B 
IGSF22                0.048   immunoglobulin superfamily, member 22 
IGFN1                 0.047   immunoglobulin-like and fibronectin type III domain...
SDK2                  0.036   sidekick 2 
MYBPC3                0.033   myosin binding protein C, cardiac 
MYBPC1                0.031   myosin binding protein C, slow type isoform 4 
MYBPC1                0.031   myosin binding protein C, slow type isoform 2 
MYBPC1                0.031   myosin binding protein C, slow type isoform 1 
MYBPC2                0.030   myosin binding protein C, fast type 
PTPRS                 0.027   protein tyrosine phosphatase, receptor type, sigma ...
MYBPC1                0.027   myosin binding protein C, slow type isoform 3 
NEO1                  0.027   neogenin homolog 1 
PTPRF                 0.026   protein tyrosine phosphatase, receptor type, F isof...
PTPRF                 0.026   protein tyrosine phosphatase, receptor type, F isof...
SDK1                  0.026   sidekick 1 
PTPRS                 0.026   protein tyrosine phosphatase, receptor type, sigma ...
DCC                   0.025   deleted in colorectal carcinoma 
PTPRD                 0.025   protein tyrosine phosphatase, receptor type, D isofo...
CNTN3                 0.025   contactin 3 
PTPRD                 0.025   protein tyrosine phosphatase, receptor type, D isofor...
PTPRD                 0.025   protein tyrosine phosphatase, receptor type, D isofo...
PTPRD                 0.023   protein tyrosine phosphatase, receptor type, D isof...
PTPRD                 0.023   protein tyrosine phosphatase, receptor type, D isofo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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