ELL2 5787

Name: ELL2	Sequence: fasta or formatted (640aa)		NCBI GI: 155722987
Description: elongation factor, RNA polymerase II, 2		Referenced in: RNA Polymerase and General Transcription Factors
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.6 36 4 C cysteine 1.2 8 1 D aspartate 5.0 32 2 E glutamate 7.3 47 3 F phenylalanine 2.0 13 1 G glycine 4.5 29 2 H histidine 2.8 18 1 I isoleucine 5.2 33 1 K lysine 8.4 54 3 L leucine 8.4 54 2 M methionine 1.4 9 1 N asparagine 5.6 36 2 P proline 6.9 44 3 Q glutamine 5.9 38 3 R arginine 6.1 39 2 S serine 10.3 66 3 T threonine 4.8 31 1 V valine 4.2 27 1 W tryptophan 0.3 2 1 Y tyrosine 3.8 24 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 elongation factor, RNA polymerase II, 2 ELL 0.419 elongation factor RNA polymerase II ELL3 0.084 elongation factor RNA polymerase II-like 3 MARVELD2 0.052 MARVEL domain containing 2 isoform 1 OCLN 0.036 occludin OCEL1 0.027 occludin/ELL domain containing 1 PELP1 0.017 proline, glutamic acid and leucine rich protein 1 [... FYB 0.016 FYN binding protein (FYB-120/130) isoform 2 FYB 0.016 FYN binding protein (FYB-120/130) isoform 1 ATN1 0.014 atrophin-1 ATN1 0.014 atrophin-1 MAP1A 0.013 microtubule-associated protein 1A SRRM1 0.013 serine/arginine repetitive matrix 1 ZFHX4 0.013 zinc finger homeodomain 4 DZIP3 0.013 DAZ interacting protein 3, zinc finger NAV3 0.013 neuron navigator 3 APC 0.012 adenomatous polyposis coli APC 0.012 adenomatous polyposis coli APC 0.012 adenomatous polyposis coli THOC2 0.012 THO complex 2 ZC3H4 0.012 zinc finger CCCH-type containing 4 ITSN1 0.012 intersectin 1 isoform ITSN-s ITSN1 0.012 intersectin 1 isoform ITSN-l FMN2 0.012 formin 2 ODZ2 0.012 odz, odd Oz/ten-m homolog 2 DDX23 0.012 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 MED1 0.011 mediator complex subunit 1 NAV2 0.011 neuron navigator 2 isoform 3 NAV2 0.011 neuron navigator 2 isoform 1 NAV2 0.011 neuron navigator 2 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.