Guide to the Human Genome
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Name: DDX23 Sequence: fasta or formatted (820aa) NCBI GI: 41327771
Description:

DEAD (Asp-Glu-Ala-Asp) box polypeptide 23

Referenced in:

DEAD / H Helicase Family
Capping and Splicing

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         50           2
 C cysteine            0.7          6           1
 D aspartate           7.7         63           2
 E glutamate          10.9         89           3
 F phenylalanine       2.6         21           1
 G glycine             6.0         49           2
 H histidine           2.0         16           1
 I isoleucine          5.9         48           3
 K lysine             10.5         86           3
 L leucine             7.1         58           2
 M methionine          2.1         17           1
 N asparagine          2.0         16           1
 P proline             4.5         37           2
 Q glutamine           4.1         34           2
 R arginine           12.2        100           3
 S serine              5.7         47           2
 T threonine           3.7         30           2
 V valine              3.8         31           2
 W tryptophan          0.7          6           1
 Y tyrosine            2.0         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 
DDX46                 0.227   DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 
DDX17                 0.167   DEAD box polypeptide 17 isoform 3 
DDX17                 0.167   DEAD box polypeptide 17 isoform 1 
DDX43                 0.166   DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 
DDX41                 0.165   DEAD-box protein abstrakt 
DDX5                  0.162   DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 
DDX3X                 0.159   DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3 [Homo...
DDX42                 0.157   DEAD box polypeptide 42 protein 
DDX42                 0.157   DEAD box polypeptide 42 protein 
DDX3Y                 0.157   DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked ...
DDX3Y                 0.157   DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked [...
DDX59                 0.150   DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 
DDX53                 0.146   DEAD (Asp-Glu-Ala-Asp) box polypeptide 53 
DDX47                 0.142   DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1 ...
DDX4                  0.140   DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 3 ...
DDX4                  0.140   DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 1 [...
DDX4                  0.140   DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 2 ...
DDX47                 0.121   DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 2 ...
DDX27                 0.119   DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 
DDX49                 0.115   DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 
DDX52                 0.114   ATP-dependent RNA helicase ROK1 isoform a 
DDX54                 0.113   DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 isoform 2 ...
DDX54                 0.113   DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 isoform 1...
EIF4A2                0.110   eukaryotic translation initiation factor 4A2 
DDX52                 0.109   ATP-dependent RNA helicase ROK1 isoform b 
EIF4A1                0.109   eukaryotic translation initiation factor 4A isoform 1...
DDX6                  0.106   DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 
DDX39                 0.103   DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 
EIF4A3                0.101   eukaryotic translation initiation factor 4A, isoform ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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