Search of human proteins with 154816198

Search of human proteins with 154816198

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|154816198 transcription elongation factor B polypeptide
3C-like [Homo sapiens]
         (546 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|154816198 transcription elongation factor B polypeptide 3C-li...  1112   0.0  
gi|156938279 transcription elongation factor B polypeptide 3C [H...  1107   0.0  
gi|45439357 elongin A2 [Homo sapiens]                                 485   e-137
gi|208022641 elongin A [Homo sapiens]                                 280   2e-75
gi|239757016 PREDICTED: similar to RNA polymerase II transcripti...   156   4e-38
gi|7662302 TBK1 binding protein 1 [Homo sapiens]                       51   2e-06
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre...    50   5e-06
gi|113416996 PREDICTED: ankyrin repeat domain 33B [Homo sapiens]       49   1e-05
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]     48   3e-05
gi|21704281 junctophilin 2 isoform 1 [Homo sapiens]                    47   4e-05
gi|237757310 synaptojanin 1 isoform a [Homo sapiens]                   47   6e-05
gi|62362414 c-abl oncogene 1, receptor tyrosine kinase isoform a...    45   1e-04
gi|62362412 c-abl oncogene 1, receptor tyrosine kinase isoform b...    45   1e-04
gi|38788274 bromodomain PHD finger transcription factor isoform ...    45   1e-04
gi|182507165 thymus expressed gene 3-like [Homo sapiens]               45   1e-04
gi|169215850 PREDICTED: transmembrane protein 46-like [Homo sapi...    45   2e-04
gi|116268127 kinase non-catalytic C-lobe domain (KIND) containin...    45   2e-04
gi|116256363 transmembrane protease, serine 13 [Homo sapiens]          45   2e-04
gi|158854042 hypothetical protein LOC222183 [Homo sapiens]             44   3e-04
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]         44   3e-04
gi|236459851 ubinuclein 2 [Homo sapiens]                               44   4e-04
gi|9945318 MAX binding protein [Homo sapiens]                          44   4e-04
gi|157671951 solute carrier family 4, anion exchanger, member 3 ...    44   4e-04
gi|169163728 PREDICTED: hypothetical protein [Homo sapiens]            44   5e-04
gi|169163708 PREDICTED: hypothetical protein [Homo sapiens]            44   5e-04
gi|145580582 uromodulin-like 1 isoform 2 precursor [Homo sapiens]      44   5e-04
gi|28559071 DNA cytosine methyltransferase 3 alpha isoform c [Ho...    43   6e-04
gi|219804203 rabphilin 3A homolog isoform 1 [Homo sapiens]             43   6e-04
gi|45267837 rabphilin 3A homolog isoform 2 [Homo sapiens]              43   6e-04
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ...    43   8e-04

>gi|154816198 transcription elongation factor B polypeptide 3C-like
           [Homo sapiens]
          Length = 546

 Score = 1112 bits (2877), Expect = 0.0
 Identities = 546/546 (100%), Positives = 546/546 (100%)

Query: 1   MAAGSTTLRAVGKLQVRLATKTEPKKLEKYLQKLSALPMTADILAETGIRKTVKRLRKHQ 60
           MAAGSTTLRAVGKLQVRLATKTEPKKLEKYLQKLSALPMTADILAETGIRKTVKRLRKHQ
Sbjct: 1   MAAGSTTLRAVGKLQVRLATKTEPKKLEKYLQKLSALPMTADILAETGIRKTVKRLRKHQ 60

Query: 61  HVGDFARDLAARWKKLVLVDRNTGPDPQDPEESASRQRFGEALQEREKAWGFPENATAPR 120
           HVGDFARDLAARWKKLVLVDRNTGPDPQDPEESASRQRFGEALQEREKAWGFPENATAPR
Sbjct: 61  HVGDFARDLAARWKKLVLVDRNTGPDPQDPEESASRQRFGEALQEREKAWGFPENATAPR 120

Query: 121 SPSHSPEHRRTARRTPPGQQRPHPRSPSREPRAERKRPRMAPADSGPHRDPPTRTAPLPM 180
           SPSHSPEHRRTARRTPPGQQRPHPRSPSREPRAERKRPRMAPADSGPHRDPPTRTAPLPM
Sbjct: 121 SPSHSPEHRRTARRTPPGQQRPHPRSPSREPRAERKRPRMAPADSGPHRDPPTRTAPLPM 180

Query: 181 PEGPEPAVPGEQPGRGHAHAAQGGPLLGQGCQGQPQGEAVGSHSKGHKSSRGASAQKSPP 240
           PEGPEPAVPGEQPGRGHAHAAQGGPLLGQGCQGQPQGEAVGSHSKGHKSSRGASAQKSPP
Sbjct: 181 PEGPEPAVPGEQPGRGHAHAAQGGPLLGQGCQGQPQGEAVGSHSKGHKSSRGASAQKSPP 240

Query: 241 VQESQSERLQAAGADSAGPKTVPSHVFSELWDPSEAWMQANYDLLSAFEAMTSQANPEAL 300
           VQESQSERLQAAGADSAGPKTVPSHVFSELWDPSEAWMQANYDLLSAFEAMTSQANPEAL
Sbjct: 241 VQESQSERLQAAGADSAGPKTVPSHVFSELWDPSEAWMQANYDLLSAFEAMTSQANPEAL 300

Query: 301 SAPTLQEEAAFPGRRVNAKMPVYSGSRPACQLQVPTLRQQCLRVPRNNPDALGDVEGVPY 360
           SAPTLQEEAAFPGRRVNAKMPVYSGSRPACQLQVPTLRQQCLRVPRNNPDALGDVEGVPY
Sbjct: 301 SAPTLQEEAAFPGRRVNAKMPVYSGSRPACQLQVPTLRQQCLRVPRNNPDALGDVEGVPY 360

Query: 361 SVLEPVLEGWTPDQPYRTEKDNAALARETDELWRIHCLQDFKEEKPQEHESWRELYLRLR 420
           SVLEPVLEGWTPDQPYRTEKDNAALARETDELWRIHCLQDFKEEKPQEHESWRELYLRLR
Sbjct: 361 SVLEPVLEGWTPDQPYRTEKDNAALARETDELWRIHCLQDFKEEKPQEHESWRELYLRLR 420

Query: 421 DAREQRLRVVTTKIRSARENKPSGRQTKMICFNSVAKTPYDASRRQEKSAGAADPGNGEM 480
           DAREQRLRVVTTKIRSARENKPSGRQTKMICFNSVAKTPYDASRRQEKSAGAADPGNGEM
Sbjct: 421 DAREQRLRVVTTKIRSARENKPSGRQTKMICFNSVAKTPYDASRRQEKSAGAADPGNGEM 480

Query: 481 EPAPKPAGSSQAPSGLGDGDGGSVSGGGSSNRHAAPADKTRKQAAKKVAPLMAKAIRDYK 540
           EPAPKPAGSSQAPSGLGDGDGGSVSGGGSSNRHAAPADKTRKQAAKKVAPLMAKAIRDYK
Sbjct: 481 EPAPKPAGSSQAPSGLGDGDGGSVSGGGSSNRHAAPADKTRKQAAKKVAPLMAKAIRDYK 540

Query: 541 GRFSRR 546
           GRFSRR
Sbjct: 541 GRFSRR 546


>gi|156938279 transcription elongation factor B polypeptide 3C [Homo
           sapiens]
          Length = 546

 Score = 1107 bits (2862), Expect = 0.0
 Identities = 544/546 (99%), Positives = 544/546 (99%)

Query: 1   MAAGSTTLRAVGKLQVRLATKTEPKKLEKYLQKLSALPMTADILAETGIRKTVKRLRKHQ 60
           MAAGSTTLRAVGKLQVRLATKTEPKKLEKYLQKLSALPMTADILAETGIRKTVKRLRKHQ
Sbjct: 1   MAAGSTTLRAVGKLQVRLATKTEPKKLEKYLQKLSALPMTADILAETGIRKTVKRLRKHQ 60

Query: 61  HVGDFARDLAARWKKLVLVDRNTGPDPQDPEESASRQRFGEALQEREKAWGFPENATAPR 120
           HVGDFARDLAARWKKLVLVDRNTGPDPQDPEESASRQRFGEALQEREKAWGFPENATAPR
Sbjct: 61  HVGDFARDLAARWKKLVLVDRNTGPDPQDPEESASRQRFGEALQEREKAWGFPENATAPR 120

Query: 121 SPSHSPEHRRTARRTPPGQQRPHPRSPSREPRAERKRPRMAPADSGPHRDPPTRTAPLPM 180
           SPSHSPEHRRTARRTPPGQQRPHPRSPSREPRAERKRPRMAPADSGPHRDPPTRTAPLPM
Sbjct: 121 SPSHSPEHRRTARRTPPGQQRPHPRSPSREPRAERKRPRMAPADSGPHRDPPTRTAPLPM 180

Query: 181 PEGPEPAVPGEQPGRGHAHAAQGGPLLGQGCQGQPQGEAVGSHSKGHKSSRGASAQKSPP 240
           PEGPEPAVPGEQPGRGHAHAAQGGPLLGQGCQGQPQGEAVGSHSKGHKSSRGASAQKSPP
Sbjct: 181 PEGPEPAVPGEQPGRGHAHAAQGGPLLGQGCQGQPQGEAVGSHSKGHKSSRGASAQKSPP 240

Query: 241 VQESQSERLQAAGADSAGPKTVPSHVFSELWDPSEAWMQANYDLLSAFEAMTSQANPEAL 300
           VQESQSERLQAAGADSAGPKTVPSHVFSELWDPSEAWMQANYDLLSAFEAMTSQANPEAL
Sbjct: 241 VQESQSERLQAAGADSAGPKTVPSHVFSELWDPSEAWMQANYDLLSAFEAMTSQANPEAL 300

Query: 301 SAPTLQEEAAFPGRRVNAKMPVYSGSRPACQLQVPTLRQQCLRVPRNNPDALGDVEGVPY 360
           SAP LQEEAAFPGRRVNAKMPVYSGSRPACQLQVPTLRQQCLRVPRNNPDALGDVEGVPY
Sbjct: 301 SAPALQEEAAFPGRRVNAKMPVYSGSRPACQLQVPTLRQQCLRVPRNNPDALGDVEGVPY 360

Query: 361 SVLEPVLEGWTPDQPYRTEKDNAALARETDELWRIHCLQDFKEEKPQEHESWRELYLRLR 420
           SVLEPVLEGWTPDQ YRTEKDNAALARETDELWRIHCLQDFKEEKPQEHESWRELYLRLR
Sbjct: 361 SVLEPVLEGWTPDQLYRTEKDNAALARETDELWRIHCLQDFKEEKPQEHESWRELYLRLR 420

Query: 421 DAREQRLRVVTTKIRSARENKPSGRQTKMICFNSVAKTPYDASRRQEKSAGAADPGNGEM 480
           DAREQRLRVVTTKIRSARENKPSGRQTKMICFNSVAKTPYDASRRQEKSAGAADPGNGEM
Sbjct: 421 DAREQRLRVVTTKIRSARENKPSGRQTKMICFNSVAKTPYDASRRQEKSAGAADPGNGEM 480

Query: 481 EPAPKPAGSSQAPSGLGDGDGGSVSGGGSSNRHAAPADKTRKQAAKKVAPLMAKAIRDYK 540
           EPAPKPAGSSQAPSGLGDGDGGSVSGGGSSNRHAAPADKTRKQAAKKVAPLMAKAIRDYK
Sbjct: 481 EPAPKPAGSSQAPSGLGDGDGGSVSGGGSSNRHAAPADKTRKQAAKKVAPLMAKAIRDYK 540

Query: 541 GRFSRR 546
           GRFSRR
Sbjct: 541 GRFSRR 546


>gi|45439357 elongin A2 [Homo sapiens]
          Length = 753

 Score =  485 bits (1249), Expect = e-137
 Identities = 276/460 (60%), Positives = 304/460 (66%), Gaps = 27/460 (5%)

Query: 113 PENATAPRSPSHSPEHRRTARRTPPGQQRP-----HPRSPSREPRAERKRPRMAPADSGP 167
           P    AP S    P+H  + ++ P    R      H  SP  + +    R          
Sbjct: 295 PALEEAPDSHQKRPQHSHSNKKRPSLDGRDPGNGTHGLSPEEKEQLSNDRETQEGKPPTA 354

Query: 168 HRDPPTRTAPLPMPEGPEPAVPGEQPGRGHAHAAQGGPLLGQGCQ-GQPQGEAVGSHSKG 226
           H D  T  + L   E  + A   EQP            L  Q  + G+    A+G   + 
Sbjct: 355 HLDR-TSVSSLSEVEEVDMAEEFEQPTLSCEKYLTYDQLRKQKKKTGKSATTALGDKQRK 413

Query: 227 HKSSRGA-----SAQKSPPVQESQSERLQAAGADSAGPKTVPSHVFSELWDPSEAWMQAN 281
              S+G      SA+K PPVQESQSERLQAAGADSAGPKTVPSHVFSELWD SEAWMQAN
Sbjct: 414 ANESKGTRESWDSAKKLPPVQESQSERLQAAGADSAGPKTVPSHVFSELWDLSEAWMQAN 473

Query: 282 YDLLSAFEAMTSQANPEALSAPTLQEEAAFPGRRVNAKMPVYSGSRPACQLQVPTLRQQC 341
           YD LS  ++MTSQA PEALS+P  +EEAAFPGRRVNAKMPVYSGSRPACQLQVPTLRQQC
Sbjct: 474 YDPLSDSDSMTSQAKPEALSSPKFREEAAFPGRRVNAKMPVYSGSRPACQLQVPTLRQQC 533

Query: 342 LRVPRNNPDALGDVEGVPYSVLEPVLEGWTPDQPYRTEKDNAALARETDELWRIHCLQDF 401
            +V RNNPDAL DV  VPY VLEPVLEGW PDQ YR +KDN AL RETDEL R HC QDF
Sbjct: 534 AQVLRNNPDALSDVGEVPYWVLEPVLEGWRPDQLYRRKKDNHALVRETDELRRNHCFQDF 593

Query: 402 KEEKPQEHESWRELYLRLRDAREQRLRVVTTKIRSARENKPSGRQTKMICFNSVAKTPYD 461
           KEEKPQE+++WRE YLRL DA EQRLRV+TT IRSAR N P+GR+ KMICF SVAKTPYD
Sbjct: 594 KEEKPQENKTWREQYLRLPDAPEQRLRVMTTNIRSARGNNPNGREAKMICFKSVAKTPYD 653

Query: 462 ASRRQEKSAGAADPGNGEMEPAPKPAGSSQAPSGLGDGDGGSVSGG-------------- 507
            SRRQEKSAG ADP NGE++PA KPAGSS  PS      GG  S                
Sbjct: 654 TSRRQEKSAGDADPENGEIKPASKPAGSSHTPSSQSSSGGGRDSSSSILRWLPEKRANPC 713

Query: 508 -GSSNRHAAPADKTRKQAAKKVAPLMAKAIRDYKGRFSRR 546
             SSN HAAPA KTRKQAAKKVAPLMAKAIRDYK RFSRR
Sbjct: 714 LSSSNEHAAPAAKTRKQAAKKVAPLMAKAIRDYKRRFSRR 753



 Score =  426 bits (1094), Expect = e-119
 Identities = 210/231 (90%), Positives = 216/231 (93%)

Query: 1   MAAGSTTLRAVGKLQVRLATKTEPKKLEKYLQKLSALPMTADILAETGIRKTVKRLRKHQ 60
           MAAGSTTL AV KLQVRLATKTEPKKLEKYLQKLSALPMTADILAETGIRKTVKRLRKHQ
Sbjct: 1   MAAGSTTLHAVEKLQVRLATKTEPKKLEKYLQKLSALPMTADILAETGIRKTVKRLRKHQ 60

Query: 61  HVGDFARDLAARWKKLVLVDRNTGPDPQDPEESASRQRFGEALQEREKAWGFPENATAPR 120
           HVGDFARDLAARWKKLVLVDRNT P PQDPEESASRQRFGEALQ++EKAWGFPENATAPR
Sbjct: 61  HVGDFARDLAARWKKLVLVDRNTRPGPQDPEESASRQRFGEALQDQEKAWGFPENATAPR 120

Query: 121 SPSHSPEHRRTARRTPPGQQRPHPRSPSREPRAERKRPRMAPADSGPHRDPPTRTAPLPM 180
           SPSHSPEHRRTARRTPPGQQRPHPRS SREPRAERK PR+APADSG +R  PTRTAPL M
Sbjct: 121 SPSHSPEHRRTARRTPPGQQRPHPRSHSREPRAERKCPRIAPADSGRYRASPTRTAPLRM 180

Query: 181 PEGPEPAVPGEQPGRGHAHAAQGGPLLGQGCQGQPQGEAVGSHSKGHKSSR 231
           PEGPEPA PG+QPGRGH HAAQGGPLL  GCQGQPQG+AV SHSKGHKSSR
Sbjct: 181 PEGPEPAAPGKQPGRGHTHAAQGGPLLCPGCQGQPQGKAVVSHSKGHKSSR 231


>gi|208022641 elongin A [Homo sapiens]
          Length = 798

 Score =  280 bits (716), Expect = 2e-75
 Identities = 164/326 (50%), Positives = 212/326 (65%), Gaps = 16/326 (4%)

Query: 234 SAQKSPPVQESQSERLQAAGADSAGPKTVPSHVFSELWDPSEAWMQANYDLLSAFEAMTS 293
           S QK P V +++SE+   AGAD A  + VP  V   L D     +QANY  L + E ++S
Sbjct: 476 SVQKLPKVNKTKSEK--PAGADLAKLRKVPD-VLPVLPDLPLPAIQANYRPLPSLELISS 532

Query: 294 -QANPEALSAPTLQEEAAFPGRRVNAKMPVYSGSRPACQLQVPTLRQQCLRVPRNNPDAL 352
            Q   +A S+P  +EEA F GRR+N+KM VYSGS+ A   ++ TL QQC+RV +NN D++
Sbjct: 533 FQPKRKAFSSPQEEEEAGFTGRRMNSKMQVYSGSKCAYLPKMMTLHQQCIRVLKNNIDSI 592

Query: 353 GDVEGVPYSVLEPVLEGWTPDQPYRTEKDNAALARETDELWRIHCLQDFKEEKPQEHESW 412
            +V GVPYSVLEPVLE  TPDQ YR E+ N  L  ETD+LW++HC +DFKEE+P+E+ESW
Sbjct: 593 FEVGGVPYSVLEPVLERCTPDQLYRIEEYNHVLIEETDQLWKVHCHRDFKEERPEEYESW 652

Query: 413 RELYLRLRDAREQRLRVVTTKIRSARENKPSGRQTKMICFNSVAKTPYDASRRQEK--SA 470
           RE+YLRL+DAREQRLRV+T  I+ A  NKP GRQ KM   NSVAK P D  RRQEK  + 
Sbjct: 653 REMYLRLQDAREQRLRVLTKNIQFAHANKPKGRQAKMAFVNSVAKPPRDVRRRQEKFGTG 712

Query: 471 GAADPGNGEMEPAPKPAGSSQAPSGL----GDGDGGSVSGGGSSNRHAAPADKT------ 520
           GAA P   +++PAP P GSS A +         +  +  G  +S+ H AP   +      
Sbjct: 713 GAAVPEKIKIKPAPYPMGSSHASASSISFNPSPEEPAYDGPSTSSAHLAPVVSSTVSYDP 772

Query: 521 RKQAAKKVAPLMAKAIRDYKGRFSRR 546
           RK   KK+AP+MAK I+ +K RFSRR
Sbjct: 773 RKPTVKKIAPMMAKTIKAFKNRFSRR 798



 Score =  188 bits (478), Expect = 1e-47
 Identities = 121/276 (43%), Positives = 158/276 (57%), Gaps = 27/276 (9%)

Query: 3   AGSTTLRAVGKLQVRLATKTEPKKLEKYLQKLSALPMTADILAETGIRKTVKRLRKHQHV 62
           A  + L+ V KLQ RLA   +PKKL KYL+KLS LP+T DILAETG+ KTV  LRKH+HV
Sbjct: 28  AAESALQVVEKLQARLAANPDPKKLLKYLKKLSTLPITVDILAETGVGKTVNSLRKHEHV 87

Query: 63  GDFARDLAARWKKLVLVDRNTGPDPQDPEESASRQRFGEALQEREKAWG-FPENATAPRS 121
           G FARDL A+WKKLV V+RN  PD QD E+S SR+R  +ALQ+ E+  G + E   A  S
Sbjct: 88  GSFARDLVAQWKKLVPVERNAEPDEQDFEKSNSRKRPRDALQKEEEMEGDYQETWKATGS 147

Query: 122 PSHSPEHRRTARRTPPGQQRPHPRSPSREPRAERKR-PRMAP--------ADSGPHRDPP 172
            S+SP+HR+   R     +RPH  S   E R ERKR  RM+P        +D G  + PP
Sbjct: 148 RSYSPDHRQKKHRKLSELERPHKVSHGHERRDERKRCHRMSPTYSSDPESSDYGHVQSPP 207

Query: 173 TRTAPLPM--------PEGPEPAVPGEQPGRGHAHAAQGGPLLGQGCQ---GQPQGEAVG 221
           + T+P  M         E  EP V  ++PG+GH++A Q    LG   +   G+P G+ V 
Sbjct: 208 SCTSPHQMYVDHYRSLEEDQEPIVSHQKPGKGHSNAFQ--DRLGASQERHLGEPHGKGVV 265

Query: 222 SHSKGHKSSRGASAQKSPPVQESQSERLQAAGADSA 257
           S +K HKSS     +   PV     E+      + +
Sbjct: 266 SQNKEHKSSH----KDKRPVDAKSDEKASVVSREKS 297


>gi|239757016 PREDICTED: similar to RNA polymerase II transcription
           factor SIII subunit A3, partial [Homo sapiens]
          Length = 78

 Score =  156 bits (395), Expect = 4e-38
 Identities = 77/78 (98%), Positives = 77/78 (98%)

Query: 469 SAGAADPGNGEMEPAPKPAGSSQAPSGLGDGDGGSVSGGGSSNRHAAPADKTRKQAAKKV 528
           SAGAADPGNGEMEPAPKPAGSSQAPSGLGDGDGGS SGGGSSNRHAAPADKTRKQAAKKV
Sbjct: 1   SAGAADPGNGEMEPAPKPAGSSQAPSGLGDGDGGSGSGGGSSNRHAAPADKTRKQAAKKV 60

Query: 529 APLMAKAIRDYKGRFSRR 546
           APLMAKAIRDYKGRFSRR
Sbjct: 61  APLMAKAIRDYKGRFSRR 78


>gi|7662302 TBK1 binding protein 1 [Homo sapiens]
          Length = 615

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 44/155 (28%), Positives = 62/155 (40%), Gaps = 16/155 (10%)

Query: 113 PENATAPRSPSHSP--EHRRTARRTPPGQQRPHPRSPSREPRAERKRPRMAPADSGP--- 167
           P  A  P  P  SP  + R      P  QQR  P SPS      ++R  + P+   P   
Sbjct: 353 PARAAPPCPPCQSPVPQRRSPVPPCPSPQQRRSPASPSCPSPVPQRRSPVPPSCQSPSPQ 412

Query: 168 HRDPPTRTAPLPMPEGPEPAVPGEQPGRGHAHAAQGGPLLGQGCQGQPQGEAVGSHSKGH 227
            R P   + P P P  P P  PGE+     A+A      +  G QG+         S   
Sbjct: 413 RRSPVPPSCPAPQPRPPPPPPPGERTLAERAYAKPPSHHVKAGFQGR--------RSYSE 464

Query: 228 KSSRGASAQKSPPVQESQSERL---QAAGADSAGP 259
            +   A A  SPP  ++++  L   +A G++  GP
Sbjct: 465 LAEGAAYAGASPPWLQAEAATLPKPRAYGSELYGP 499


>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
           preproprotein [Homo sapiens]
          Length = 331

 Score = 50.1 bits (118), Expect = 5e-06
 Identities = 42/166 (25%), Positives = 61/166 (36%), Gaps = 15/166 (9%)

Query: 114 ENATAPRSPSHSPEHRRTARRTPPGQQRPHPRSPSREPRAERKRPRMAPADSGPHRDPP- 172
           + + +PRSP   P+         P    P P  P   P    K+P+  P    P   PP 
Sbjct: 146 DKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGKKPQGPPPPGKPQGPPPQ 205

Query: 173 -----TRTAPLPMPEGP------EPAVPGEQPGRGHAHAAQGG-PLLGQGCQGQPQGEAV 220
                +  +P   P+GP      +P  P   PG+      QGG    G    G+PQG   
Sbjct: 206 GDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPA 265

Query: 221 GSHSKGHKSSRGASAQKSPPVQESQSER--LQAAGADSAGPKTVPS 264
              SK   +       + PP QE  + +     AG +   P+  P+
Sbjct: 266 QGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPA 311



 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 41/151 (27%), Positives = 57/151 (37%), Gaps = 18/151 (11%)

Query: 114 ENATAPRSPSHSPEHRRTARRTPPGQQRPHPRSPSREPRAERKRPRMAPADSG--PHRDP 171
           + + +PRSP   P+        PP Q    P+ P   P     +P+  P   G  P   P
Sbjct: 85  DKSRSPRSPPGKPQ-------GPPPQGGNQPQGPPPPP----GKPQGPPPQGGNRPQGPP 133

Query: 172 PTRTAPLPMPEGPEPAVPGEQPGRGHAHAAQGGPLLGQGCQGQPQGEAVGSHSKGHKSSR 231
           P      P P+G +   P   PG+      QGG    QG    P G+  G   +G K  +
Sbjct: 134 PPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGN-QPQG-PPPPPGKPQGPPPQGGKKPQ 191

Query: 232 G---ASAQKSPPVQESQSERLQAAGADSAGP 259
           G       + PP Q  +S   Q+      GP
Sbjct: 192 GPPPPGKPQGPPPQGDKSRSSQSPPGKPQGP 222



 Score = 33.5 bits (75), Expect = 0.51
 Identities = 39/153 (25%), Positives = 51/153 (33%), Gaps = 17/153 (11%)

Query: 114 ENATAPRSPSHSPEHRRTARRTPPGQQRPHPRSPSREPRAERKRPRMAPADSG--PHRDP 171
           +N     S   SP       + P  Q    P+ P   P     +P+  P   G  P   P
Sbjct: 17  QNLNEDVSQEESPSLIAGNPQGPSPQGGNKPQGPPPPPG----KPQGPPPQGGNKPQGPP 72

Query: 172 PTRTAPLPMPEGPEPAVPGEQPGRGHAHAAQGGPLLGQGCQGQPQG-EAVGSHSKGHKSS 230
           P      P P+G +   P   PG+      QGG         QPQG        +G    
Sbjct: 73  PPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGG--------NQPQGPPPPPGKPQGPPPQ 124

Query: 231 RGASAQKSPPVQESQSERLQAAGADSAGPKTVP 263
            G   Q  PP  + Q    Q  G  S  P++ P
Sbjct: 125 GGNRPQGPPPPGKPQGPPPQ--GDKSRSPRSPP 155



 Score = 33.5 bits (75), Expect = 0.51
 Identities = 33/134 (24%), Positives = 49/134 (36%), Gaps = 10/134 (7%)

Query: 84  GPDPQDPEESASRQRFGEALQEREKAWGFPENATAPRSPSHSPEHRRTARRTPPGQQRPH 143
           GP PQ  +  +S+   G+      +    P+    P      P  +   +   P    P 
Sbjct: 201 GPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGP----PP 256

Query: 144 PRSPSREPRAERKRPRMAPADSGPHRDPPTRTAPLPMPEGPEPAVPG--EQPGRGHAHAA 201
           P  P   P     + + A +  G  + PP +      P+GP P   G  +QP    A   
Sbjct: 257 PGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEG--NNPQGPPPPAGGNPQQPQAPPAGQP 314

Query: 202 QGGPLLGQGCQGQP 215
           QG P   QG  G+P
Sbjct: 315 QGPPRPPQG--GRP 326


>gi|113416996 PREDICTED: ankyrin repeat domain 33B [Homo sapiens]
          Length = 1006

 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 94/397 (23%), Positives = 133/397 (33%), Gaps = 47/397 (11%)

Query: 81  RNTGPD--PQDPEESASRQRFGEALQEREKAWGFPENATAPRSPSHSPEHRRTARRTPPG 138
           RNT P     D   S  R RF E            ++   P   + +P  + TA    P 
Sbjct: 280 RNTPPPIPGSDQPSSHGRPRFRET----------GDSEDCPPFRAGTPPQQPTA----PS 325

Query: 139 QQRPHP-RSPSREPRAERKRPRMAPADSGPHRDPPTRTAPLPMPEGPEPAVP--GEQPGR 195
            + P P RSP   PR     PR AP  +    D P    P P    PE   P  GE P  
Sbjct: 326 SEWPGPQRSPGTGPRWTAPLPRPAPLPAKRPGDSPASKRPRPGGVSPEARDPPKGENPLC 385

Query: 196 GHAHAAQGGPLLGQGCQGQPQGEAVGSHSKGHKSSRGASAQKSPPVQESQSERLQAAGAD 255
               A + GP   +G      G   G   +G     G S + +PP            G  
Sbjct: 386 SSEAAGETGPTQVRGPDALGGGRLQGKGREGKAPGEGVSPRPAPPRLGKPPRSRPPQGL- 444

Query: 256 SAGPKTVPSHVFSELWDPSEAWMQANYDLLSAFEAMTSQANPEALSAPTLQEEAAFPGRR 315
            A P        S L   S    +A +      EA +        S  +L    A P ++
Sbjct: 445 -AQPPETFFFERSRLVPVSAELERAGHGFSGDAEARSGDLGARPASRSSLPSAPAPPAQQ 503

Query: 316 VNAKMPVYSG-----SRPACQLQVPTLRQQCLRVPRNNPDALGDVEGVP--YSVLEPVLE 368
             A     +G          QL  PT +        + P     VE  P  Y   E +LE
Sbjct: 504 PQAARHGAAGRDQGRRAAGAQLHDPTTQP-------SPPTGAQQVEEDPADYEEFEDILE 556

Query: 369 GWTPDQPYRTEKDNAALARETDELWRIHCLQDFKEEKPQEHESWRELYLRLRDAREQRLR 428
             +   P  +  D++    E +E   +   +   E  P   ES  E    LR A    + 
Sbjct: 557 --SARHPQASHSDDSFYPFEDEEEHGVESAESVPEGVP---ESVPETATLLRAACANNVG 611

Query: 429 VVTTKIR------SARENKPSGRQTKMI-CFNSVAKT 458
           ++ T +R       A+E   +GR   ++ C++    T
Sbjct: 612 LLRTLVRRGVSVEEAQETDRNGRTGLIVACYHGFVDT 648


>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
          Length = 416

 Score = 47.8 bits (112), Expect = 3e-05
 Identities = 50/211 (23%), Positives = 75/211 (35%), Gaps = 32/211 (15%)

Query: 84  GPDPQDPEESASRQRFGEALQEREKAWGFPENATAPRSPSHSPEHRRTARRTPPGQQR-- 141
           G  PQ P     + + G   Q   K  G P     P+ P    +++  + R+PPG+ +  
Sbjct: 188 GNQPQGPPPPPGKPQ-GPPPQGGNKPQG-PPPPGKPQGPPPQGDNKSQSARSPPGKPQGP 245

Query: 142 ------------PHPRSPSREPRAERKRPRMAPADSGPHRDPP-------TRTAPLPMPE 182
                       P P  P   P     +P+  P    P   PP       +  +P   P+
Sbjct: 246 PPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQ 305

Query: 183 GP------EPAVPGEQPGRGHAHAAQGG-PLLGQGCQGQPQGEAVGSHSKGHKSSRGASA 235
           GP      +P  P   PG+      QGG    G    G+PQG      SK   +      
Sbjct: 306 GPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPPGK 365

Query: 236 QKSPPVQESQSER--LQAAGADSAGPKTVPS 264
            + PP QE  + +     AG +   P+  P+
Sbjct: 366 PQGPPQQEGNNPQGPPPPAGGNPQQPQAPPA 396



 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 46/187 (24%), Positives = 65/187 (34%), Gaps = 30/187 (16%)

Query: 84  GPDPQDPEESASRQRFGEALQEREKAWGFPENATAPRSPSHSPEHRRTARRTPPGQQR-- 141
           G  PQ P     + + G   Q   K  G P     P+ P    +++  + R+PPG+ +  
Sbjct: 126 GNQPQGPPPPPGKPQ-GPPPQGGNKPQG-PPPPGKPQGPPPQGDNKSRSSRSPPGKPQGP 183

Query: 142 ------------PHPRSPSREPRAERKRPRMAPADSGPHRDPP-------TRTAPLPMPE 182
                       P P  P   P     +P+  P    P   PP       +  +P   P+
Sbjct: 184 PPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQ 243

Query: 183 GP------EPAVPGEQPGRGHAHAAQGG-PLLGQGCQGQPQGEAVGSHSKGHKSSRGASA 235
           GP      +P  P   PG+      QGG    G    G+PQG      SK   S      
Sbjct: 244 GPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGK 303

Query: 236 QKSPPVQ 242
            + PP Q
Sbjct: 304 PQGPPPQ 310



 Score = 42.7 bits (99), Expect = 8e-04
 Identities = 35/143 (24%), Positives = 50/143 (34%), Gaps = 14/143 (9%)

Query: 114 ENATAPRSPSHSPEHRRTARRTPPGQQRPHPRSPSREPRAERKRPRMAPADSGPHRDPP- 172
           + + +PRSP   P+         P    P P  P   P     +P+  P    P   PP 
Sbjct: 106 DKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQ 165

Query: 173 ------TRTAPLPMPEGP------EPAVPGEQPGRGHAHAAQGG-PLLGQGCQGQPQGEA 219
                 +  +P   P+GP      +P  P   PG+      QGG    G    G+PQG  
Sbjct: 166 GDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPP 225

Query: 220 VGSHSKGHKSSRGASAQKSPPVQ 242
               +K   +       + PP Q
Sbjct: 226 PQGDNKSQSARSPPGKPQGPPPQ 248



 Score = 38.5 bits (88), Expect = 0.016
 Identities = 44/182 (24%), Positives = 68/182 (37%), Gaps = 23/182 (12%)

Query: 84  GPDPQDPEESASRQRFGEALQEREKAWGFPENATAPRSPSHSPEHRRTARRTPPGQQRPH 143
           G  PQ P     + + G   Q   K  G P     P+ P      +  + R+PPG+    
Sbjct: 250 GNQPQGPPPPPGKPQ-GPPPQGGNKPQG-PPPPGKPQGPPPQGGSKSRSSRSPPGK---- 303

Query: 144 PRSPSREPRAERKRPRMAPADSGPHRDPPTRTAPLPMPEGPEPAVPGEQPGRGHAHAAQG 203
              P   P     +P+  P   G  + PP +      P+GP P      PG+      QG
Sbjct: 304 ---PQGPPPQGGNQPQGPPPPPGKPQGPPPQGG--NKPQGPPP------PGKPQGPPPQG 352

Query: 204 G--PLLGQGCQGQPQG--EAVGSHSKGHKSSRGASAQ--KSPPVQESQSERLQAAGADSA 257
           G      +   G+PQG  +  G++ +G     G + Q  ++PP  + Q       G   +
Sbjct: 353 GSKSRSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPPQGGRPS 412

Query: 258 GP 259
            P
Sbjct: 413 RP 414



 Score = 35.8 bits (81), Expect = 0.10
 Identities = 37/154 (24%), Positives = 53/154 (34%), Gaps = 18/154 (11%)

Query: 113 PENATAPRSPSHSPEHRRTARRTPPGQQRPHPRSPSREPRAERKRPRMAPADSGPHRDPP 172
           P+    P+ P   P   +     PP Q    P+ P   P     +P+  P   G   + P
Sbjct: 41  PQGGNKPQGPPSPPGKPQG----PPPQGGNQPQGPPPPPG----KPQGPPPQGG---NKP 89

Query: 173 TRTAPLPMPEGPEP-----AVPGEQPGRGHAHAAQGG--PLLGQGCQGQPQGEAVGSHSK 225
               P   P+GP P       P   PG+      QGG  P       G+PQG      +K
Sbjct: 90  QGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNK 149

Query: 226 GHKSSRGASAQKSPPVQESQSERLQAAGADSAGP 259
                     Q  PP  +++S   ++      GP
Sbjct: 150 PQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGP 183



 Score = 31.6 bits (70), Expect = 2.0
 Identities = 27/102 (26%), Positives = 41/102 (40%), Gaps = 6/102 (5%)

Query: 146 SPSREPRAERKRPRMAPADSGPHRDPPTRTAPLPMPEGPEPAVPGEQPGRGHAHAAQGGP 205
           +P   P     +P+  P+  G  + PP +    P    P P  P   P +G  +  QG P
Sbjct: 35  NPQGAPPQGGNKPQGPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQG-GNKPQGPP 93

Query: 206 LLGQGCQGQPQGEAVGSHSKGHKSSRGASAQKSPPVQESQSE 247
             G+     PQG+     S+  +S  G   Q  PP   +Q +
Sbjct: 94  PPGKPQGPPPQGD----KSRSPRSPPG-KPQGPPPQGGNQPQ 130


>gi|21704281 junctophilin 2 isoform 1 [Homo sapiens]
          Length = 696

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 67/252 (26%), Positives = 87/252 (34%), Gaps = 30/252 (11%)

Query: 88  QDPEESASRQRFGEALQEREKAWGFPENATAPRSPSHSPEHRRTARRTPPGQQRPHPRSP 147
           Q  E +ASR    +A     KA    + A A    S+    R  AR   P   +P P   
Sbjct: 382 QKAEIAASRTSHAKA-----KAEAAEQAALAANQESNIA--RTLARELAPDFYQPGPEYQ 434

Query: 148 SR---EPRAERKRPRMAPADSG---------PHRDPPTRTAPLPMPEG--PEPAVPGEQP 193
            R   +   E     + P D G         P   P       P PEG  P PA    QP
Sbjct: 435 KRRLLQEILENSESLLEPPDRGAGAAGLPQPPRESPQLHERETPRPEGGSPSPAGTPPQP 494

Query: 194 GRGHAHAAQGGPLLGQGCQGQPQGEAVGSHSKGHKSSRGASAQKSPPVQESQSERLQAAG 253
            R     ++ G L      G+P GE  GS S       G  +   P  +    E LQA  
Sbjct: 495 KRPRPGVSKDGLLSPGAWNGEPSGE--GSRSVTPSEGAGRRSPARPATERMAIEALQAPP 552

Query: 254 ADSAGPKTV---PSHVFSELWDPSE--AWMQANYDLLSAFEAMTSQANPEALSAPTLQEE 308
           A S  P+       H ++    P E   +       +S  E+  S      L APTL+  
Sbjct: 553 APSREPEVALYQGYHSYAVRTTPPEPPPFEDQPEPEVSGSESAPSSPATAPLQAPTLR-- 610

Query: 309 AAFPGRRVNAKM 320
              P R   AK+
Sbjct: 611 GPEPARETPAKL 622



 Score = 29.3 bits (64), Expect = 9.7
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 5/46 (10%)

Query: 117 TAPRSPSHSPEHRRTAR-----RTPPGQQRPHPRSPSREPRAERKR 157
           +AP SP+ +P    T R     R  P +  P P  P  EPRA+ ++
Sbjct: 594 SAPSSPATAPLQAPTLRGPEPARETPAKLEPKPIIPKAEPRAKARK 639


>gi|237757310 synaptojanin 1 isoform a [Homo sapiens]
          Length = 1612

 Score = 46.6 bits (109), Expect = 6e-05
 Identities = 97/390 (24%), Positives = 143/390 (36%), Gaps = 70/390 (17%)

Query: 121  SPSHSPEHRRTARRTPPGQQRPHPRSPSREPRAERKRPRMAPADSGPHRDPPTRTAPLPM 180
            SPS SP  R +  ++P   + P P  P R  RA  + P    A S P    P    PLP 
Sbjct: 1080 SPSSSP--RTSPCQSPTISEGPVPSLPIRPSRAPSRTPGPPSAQSSPIDAQP--ATPLPQ 1135

Query: 181  PEGPEPAVPGE-QPGRGHAHAAQGGPLLGQGCQGQPQGEAVGSHSKGHKSSRGASAQKSP 239
             +  +P  P    P R  A   +  P      Q  P      S +   K   G  A  SP
Sbjct: 1136 KDPAQPLEPKRPPPPRPVAPPTRPAP-----PQRPPPPSGARSPAPTRKEFGGIGAPPSP 1190

Query: 240  PVQESQSERLQAAG---------------ADSAGP---------KTVPSHVFSELWDPSE 275
             V   + E  ++ G               A  AGP          T+P          S 
Sbjct: 1191 GVARREMEAPKSPGTTRKDNIGRSQPSPQAGLAGPGPAGYSTARPTIPPRAGVISAPQSH 1250

Query: 276  AWMQANYDLLSAFEAMTSQANPEALSAP-TLQEEAAFPGRRVNAKMPVYSGSRPACQLQV 334
            A   A   L    ++ TS+ +  +   P  L+ +AAFP        P  S   PA +LQ 
Sbjct: 1251 ARASAG-RLTPESQSKTSETSKGSTFLPEPLKPQAAFP--------PQSSLPPPAQRLQE 1301

Query: 335  PTLRQQCLRVPRNNPDALGDVEGVPYSVLEPVLEGWTPDQPYRTEKDNAALARETDELWR 394
            P        VP   P        +P S  +P LE  TP QP    + + +L  E     +
Sbjct: 1302 PL-------VPVAAP--------MPQSGPQPNLE--TPPQPPPRSRSSHSLPSEASSQPQ 1344

Query: 395  I--HCLQDFKEEKPQEHESWRELYLRLRDAREQRLRVVTTKIRSARENK----PSGRQTK 448
            +  + + D K E P + + + +L   L    + +L V T+ + +    +    PS  Q+ 
Sbjct: 1345 VKTNGISDGKRESPLKIDPFEDLSFNLLAVSKAQLSVQTSPVPTPDPKRLIQLPSATQSN 1404

Query: 449  MICFNSVAKT--PYDA-SRRQEKSAGAADP 475
            ++   S   T  P  A S+ QE    + +P
Sbjct: 1405 VLSSVSCMPTMPPIPARSQSQENMRSSPNP 1434


>gi|62362414 c-abl oncogene 1, receptor tyrosine kinase isoform a
           [Homo sapiens]
          Length = 1130

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 38/134 (28%), Positives = 54/134 (40%), Gaps = 15/134 (11%)

Query: 139 QQRPHPRSPSREPRAERKRPRMAPADSGPHRDPPTRTAPLPMPEGPEPAVPGEQPGRGHA 198
           +  P    P+  P+  R++  +APA   PH++   + + L  P   EP  P  + G G  
Sbjct: 803 ESSPGSSPPNLTPKPLRRQVTVAPASGLPHKEEAGKGSALGTPAAAEPVTPTSKAGSG-- 860

Query: 199 HAAQGGPLLGQGCQGQPQGEAVGSHSKGH---KSSRGASAQKSPPV--------QESQSE 247
             A GG   G   + + +     S S G    K SR   A   PP         + SQS 
Sbjct: 861 --APGGTSKGPAEESRVRRHKHSSESPGRDKGKLSRLKPAPPPPPAASAGKAGGKPSQSP 918

Query: 248 RLQAAGADSAGPKT 261
             +AAG    G KT
Sbjct: 919 SQEAAGEAVLGAKT 932


>gi|62362412 c-abl oncogene 1, receptor tyrosine kinase isoform b
           [Homo sapiens]
          Length = 1149

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 38/134 (28%), Positives = 54/134 (40%), Gaps = 15/134 (11%)

Query: 139 QQRPHPRSPSREPRAERKRPRMAPADSGPHRDPPTRTAPLPMPEGPEPAVPGEQPGRGHA 198
           +  P    P+  P+  R++  +APA   PH++   + + L  P   EP  P  + G G  
Sbjct: 822 ESSPGSSPPNLTPKPLRRQVTVAPASGLPHKEEAGKGSALGTPAAAEPVTPTSKAGSG-- 879

Query: 199 HAAQGGPLLGQGCQGQPQGEAVGSHSKGH---KSSRGASAQKSPPV--------QESQSE 247
             A GG   G   + + +     S S G    K SR   A   PP         + SQS 
Sbjct: 880 --APGGTSKGPAEESRVRRHKHSSESPGRDKGKLSRLKPAPPPPPAASAGKAGGKPSQSP 937

Query: 248 RLQAAGADSAGPKT 261
             +AAG    G KT
Sbjct: 938 SQEAAGEAVLGAKT 951


>gi|38788274 bromodomain PHD finger transcription factor isoform 1
            [Homo sapiens]
          Length = 2920

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 82/379 (21%), Positives = 143/379 (37%), Gaps = 71/379 (18%)

Query: 138  GQQRPHPRSPSREPRAERKRP-----RMAPADSGPH-RDPPTRTAPLPMPEGP------- 184
            G+QR    SP  +   ++  P      + PA++ P    P  +  P   P+ P       
Sbjct: 2236 GEQRQSKLSPQMQVHQDKTLPPAQSSSVGPAEAQPQTAQPSAQPQPQTQPQSPAQPEVQT 2295

Query: 185  EPAVPGEQPGRGH-------AHAAQGGPLLGQGCQGQPQGEAVGSHSKGHKSSRGASAQK 237
            +P V  +     H        HA    P +    Q QPQ    G      +S      + 
Sbjct: 2296 QPEVQTQTTVSSHVPSEAQPTHAQSSKPQV--AAQSQPQSNVQGQSPVRVQSPSQTRIRP 2353

Query: 238  SPPVQESQSERLQAAGADSAGPKTVPSHVFSELWDPSEAWMQANYDLLSAFEAMTSQANP 297
            S P Q S  ++ Q     S   + +P    + L  PS+   Q+   + S+ + ++S    
Sbjct: 2354 STPSQLSPGQQSQVQTTTS---QPIPIQPHTSLQIPSQGQPQSQPQVQSSTQTLSS---- 2406

Query: 298  EALSAPTLQEEAAFPGRRVNAKMPVYSGSRPACQLQ--------VPTLRQQCLRVPRNNP 349
                           G+ +N ++ V S SRP  Q+Q        VP L+QQ   + +   
Sbjct: 2407 ---------------GQTLN-QVTVSSPSRPQLQIQQPQPQVIAVPQLQQQVQVLSQIQS 2450

Query: 350  DALGDVE----GVPYSV---LEPVLEGWTPDQPYRTEKDNAALARETDE-LWRIHCLQDF 401
              +  ++    GVP  +   L   ++  +  Q ++ +      A    E L R+  L+D 
Sbjct: 2451 QVVAQIQAQQSGVPQQIKLQLPIQIQQSSAVQTHQIQNVVTVQAASVQEQLQRVQQLRDQ 2510

Query: 402  KEEKPQEH-ESWRELYLRLRDARE-------QRLRVVTTKIRSARENKPSGRQ--TKMIC 451
            +++K Q+  E  RE  L+  +  E        +   V   ++  +   P+ R+   +MI 
Sbjct: 2511 QQKKKQQQIEIKREHTLQASNQSEIIQKQVVMKHNAVIEHLKQKKSMTPAEREENQRMIV 2570

Query: 452  FNSVAKTPYDASRRQEKSA 470
             N V K   D   ++EK A
Sbjct: 2571 CNQVMKYILDKIDKEEKQA 2589



 Score = 32.3 bits (72), Expect = 1.1
 Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 1/48 (2%)

Query: 482 PAPKPAG-SSQAPSGLGDGDGGSVSGGGSSNRHAAPADKTRKQAAKKV 528
           P P PA  S+ AP   G G GG  +GGG    H A     R+   K V
Sbjct: 78  PPPPPAPPSTSAPGRGGRGGGGGRTGGGGGGGHLARTTAARRAVNKVV 125


>gi|182507165 thymus expressed gene 3-like [Homo sapiens]
          Length = 629

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 48/190 (25%), Positives = 74/190 (38%), Gaps = 10/190 (5%)

Query: 81  RNTGPDPQDPEESASRQR----FGEALQEREKAWGFPENATAPRSPSHSPEHRRTARRTP 136
           R  G  P D  ++    R    +  AL  R +  G  +  T+P      P  + + R+ P
Sbjct: 230 RPCGRPPTDSPDAGGAGRPLDGYISALLRRRRRRGAGQPRTSPGGADGGPRRQNSVRQRP 289

Query: 137 P-GQQRPHPRSPSREPRAERKRPR-MAPADSGPHRDPPTRTAPLPMPEGPEPA-VPGEQP 193
           P     P    P+REP  ER      +PA           +   P P  P  A  P + P
Sbjct: 290 PDASPSPGSARPAREPSLERVGGHPTSPAALSRAWASSWESEAAPEPAAPPAAPSPPDSP 349

Query: 194 GRGHAHAAQGGPLLGQGCQGQPQGEAVGSHSKGHKSSRGASAQKSPPVQESQSERLQAAG 253
             G    AQ  P      +G P G A  +  K    +RG S ++SPP +  ++   +   
Sbjct: 350 AEGRLVKAQYIPGAQAATRGLP-GRA--ARRKPPPLTRGRSVEQSPPRERPRAAGRRGRM 406

Query: 254 ADSAGPKTVP 263
           A+++G +  P
Sbjct: 407 AEASGRRGSP 416



 Score = 30.8 bits (68), Expect = 3.3
 Identities = 49/195 (25%), Positives = 67/195 (34%), Gaps = 38/195 (19%)

Query: 85  PDPQDPEESASRQRFGEALQEREKAWGFPENATAPRSPSHSPEHRRTARRTPPGQQRPHP 144
           P  + P  +  R R  EA   R    G P    A RS S +         +  G+    P
Sbjct: 392 PPRERPRAAGRRGRMAEASGRR----GSPRARKASRSQSET---------SLLGRASAVP 438

Query: 145 RSPSREPRAERKRPRMAPADSGPHRDPPT-------------RTAPLPMPEG--PEPAVP 189
             P + P AER+ PR      GP    PT              TA +   +G    P  P
Sbjct: 439 SGPPKYPTAEREEPRPPRPRRGP---APTLAAQAAGSCRRWRSTAEIDAADGRRVRPRAP 495

Query: 190 GEQ-PGRGHAHAAQGGPLLGQGCQGQPQGEAVGSHSK-GHKSSR----GASAQKSPPVQE 243
             + PG G + +A    LL  GC G     + G     G +       G   +      E
Sbjct: 496 AARVPGPGPSPSAPQRRLL-YGCAGSDSECSAGRLGPLGRRGPAGGVGGGYGESESSASE 554

Query: 244 SQSERLQAAGADSAG 258
            +S    +A +DS G
Sbjct: 555 GESPAFSSASSDSDG 569


>gi|169215850 PREDICTED: transmembrane protein 46-like [Homo
           sapiens]
          Length = 547

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 77/322 (23%), Positives = 109/322 (33%), Gaps = 51/322 (15%)

Query: 85  PDPQDPEESASRQRFGEALQEREKAW---GFPENATAPRSPSHSPEHRRTARRTPPGQ-- 139
           P PQ+P         G  +Q +       G P N+  PR+P       R AR +PPG+  
Sbjct: 186 PGPQEPLPPTLGPPLGGCVQVQMGDGLPRGSPHNSAGPRTP-------RLARASPPGEPF 238

Query: 140 QRPHPRSPSREPRAERKRPRMAPADSGPHRDPPTRTAPLPMPEGPEPAVPGEQPGRGHAH 199
            R  P   +    A    P   P   G   D   R    P PE   P       GRG   
Sbjct: 239 MRVAPPGLAAAAAARDSEPGPVPGAGGCGED---RLGSQPRPENGPPGSHRTASGRGLRR 295

Query: 200 A-AQGGPLLGQG-------------CQGQPQGEAVGSHSKGHKSSRGASAQKSPPVQESQ 245
             ++GG   G G                 P+G A     +G +   G S    P   +  
Sbjct: 296 GDSEGGVNRGIGPSRVSLLAPDKKRLNNAPRGSAAPGPPRGPRLQGGGSLTLQPDYAKYA 355

Query: 246 SERLQAAGADSAGPKTVPSHVFSELWDPSEAWMQANYDLLSAFEAMTSQANPEALSAPTL 305
           +   +AA   +A P+   S   + L  PS    +          A +   +P     P L
Sbjct: 356 T--FKAAALKAAVPRARRSA--NRLPRPSGPRPRPA-------PARSPSQSPAGTPCPVL 404

Query: 306 QEEAAFPGRRVNAKMPVYSGSRPACQ---LQVPTLRQQCLRVPRNNPDALGDVEGVPYS- 361
              A   G  +   +P  +  R  CQ      P+ RQ   R PR +PD    ++  P++ 
Sbjct: 405 SLGAR-RGVTLPCPVPAEAAPRDFCQRFPALEPSPRQPPARAPRPSPDLPAPLDACPWAP 463

Query: 362 --VLEPVLEG----WTPDQPYR 377
                P   G    WT  +P R
Sbjct: 464 PVYAPPAAPGPYAAWTSSRPAR 485


>gi|116268127 kinase non-catalytic C-lobe domain (KIND) containing 1
           isoform a [Homo sapiens]
          Length = 1749

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 65/262 (24%), Positives = 89/262 (33%), Gaps = 45/262 (17%)

Query: 70  AARWKKLVL-----VDRNTGPDPQDPEESASRQRFGEALQER--EKAWGFPENAT----- 117
           A  +K +VL     V R+     Q+  E    QR GE  ++   E   G P   T     
Sbjct: 674 ATHFKPIVLAQNASVARDQPALAQEESEERGGQREGEGEEKLSLEAHAGSPSLKTPDGPV 733

Query: 118 ---APRSPSHSPEHRRTARRTPPGQQRPHPRSPSREPRAERKRPRMAPADSGPHRDPPTR 174
               P+  +  P      R +  G+  P P++P+ +P         + A   P   PPT+
Sbjct: 734 PGPGPQGAAPEPLGASVQRDSAQGRPCPPPQAPANQPEGAS-----SAAPGSPVPAPPTK 788

Query: 175 TAPLPMPEGP-EPAVPGEQPGRGHAHAAQGGPLLGQGCQGQPQGEAVGSHSKGHKSSRGA 233
            + LP+ +GP EP  PG   G               G +    G     H   H      
Sbjct: 789 ASALPVEQGPAEPIPPGVASG---------------GLRPDALGPTTAHHGPRHPPKPPR 833

Query: 234 SAQKSPPVQESQSERLQAAG-ADSAGPKTVPSHVFSELWDPSEAWMQANYDLLSAFEAMT 292
           S     P QE +      AG  D   P +VP         P  A  +     + A     
Sbjct: 834 SKATERPGQEPEGPGATPAGERDDQSPDSVPER-------PRPADRRLCLPCVDASPLPG 886

Query: 293 SQANPEALSAPTL-QEEAAFPG 313
             A P    A  L QEE AF G
Sbjct: 887 RTACPSLQEATRLIQEEFAFDG 908



 Score = 33.5 bits (75), Expect = 0.51
 Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 3/32 (9%)

Query: 157 RPRMAPADSGPHR---DPPTRTAPLPMPEGPE 185
           R R AP ++GP R   DP T    LP PEGPE
Sbjct: 216 RERPAPGNAGPRRPPGDPSTDPEVLPTPEGPE 247


>gi|116256363 transmembrane protease, serine 13 [Homo sapiens]
          Length = 567

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 39/128 (30%), Positives = 50/128 (39%), Gaps = 22/128 (17%)

Query: 115 NATAPRSPSH--SPEHRRTARRTPPGQQRPHPRSPSREPRAERKRPRMAPADSGPHRDPP 172
           NA+  R+PS   SP     A  TPPG+  P   SP++   A     R +PA + P   PP
Sbjct: 8   NASPARTPSAGASPAQASPAG-TPPGRASPAQASPAQASPAGTPPGRASPAQASPAGTPP 66

Query: 173 TRTAPLPMPEGPEPAVPGEQPGRGHAHAAQGGPLLGQGCQGQPQGEAVGSHSKGHKSS-R 231
            R +P                  G A  AQ  P      +  P   ++   S G  SS R
Sbjct: 67  GRASP------------------GRASPAQASPAQASPARASPALASLSRSSSGRSSSAR 108

Query: 232 GASAQKSP 239
            AS   SP
Sbjct: 109 SASVTTSP 116


>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
          Length = 653

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 58/218 (26%), Positives = 74/218 (33%), Gaps = 71/218 (32%)

Query: 85  PDPQDPEESASRQRFGEALQEREKAWGFPENATAPRSPSHSPEHR-----RTARRTPP-- 137
           P P       S QR G + Q      G P +A +P     SP  R       A  TPP  
Sbjct: 300 PSPSGGSGWGSPQRNGGSGQRSGAHGGRPGSAHSPPDKPSSPSPRVRDKAAAAAPTPPAR 359

Query: 138 GQQRPHPRS-PS-------------REPRAERKRPRMAPADSGPHRDPPTRTAPLPMPEG 183
           G++ P PRS PS             R  R  R+R R   + S P R    R  P P P G
Sbjct: 360 GKESPSPRSAPSSQGRGGRAAGGAGRRRRRRRRRRRSRSSASAPRRRGRRRPRPAP-PRG 418

Query: 184 PEPAV-----------------PGEQPG--RGH------------------------AHA 200
              ++                 PG +PG  RGH                        AH 
Sbjct: 419 SSRSLSRARSSSDSGSGRGAPGPGPEPGSERGHGGHGKRAKERPPRARPASTSPSPGAHG 478

Query: 201 AQGGPLLGQGCQGQPQGEAVGSHSKGHKSSRGASAQKS 238
            +GGP      +G+    + G H +   SSR  S  +S
Sbjct: 479 RRGGP------EGKSSSRSPGPHPRSWSSSRSPSKSRS 510



 Score = 39.3 bits (90), Expect = 0.009
 Identities = 37/139 (26%), Positives = 51/139 (36%), Gaps = 20/139 (14%)

Query: 139 QQRPHPRSPSREPRAERKRPRMAPADSGPHRD--PPTRTAPLPMPEGPEPAVPGEQPGRG 196
           ++RPH  SP R           +P+ S  + D   P+R +P    EG +    G Q   G
Sbjct: 240 KKRPHTESPGRRSHRHSSGSSHSPSLSSHYSDSRSPSRLSPKHRDEGRK---TGSQRSSG 296

Query: 197 HAHAAQGGPLLGQGCQGQPQGEAVGSHSKGHKSSRGASAQKSPPVQESQSERLQ------ 250
               +  G   G G  G PQ         G    R  SA   P    S S R++      
Sbjct: 297 SRSPSPSG---GSG-WGSPQRNGGSGQRSGAHGGRPGSAHSPPDKPSSPSPRVRDKAAAA 352

Query: 251 -----AAGADSAGPKTVPS 264
                A G +S  P++ PS
Sbjct: 353 APTPPARGKESPSPRSAPS 371



 Score = 38.1 bits (87), Expect = 0.021
 Identities = 39/205 (19%), Positives = 68/205 (33%), Gaps = 14/205 (6%)

Query: 49  IRKTVKRLRKHQHVGDFA--------RDLAARWKKLVLVDRNTGPDPQDPEESASRQRFG 100
           +RK  K ++KH+     +        R  +++ K+         P  + P   + R   G
Sbjct: 199 LRKKKKSVKKHRRDRSDSGSRRKRRHRSRSSKCKRKEKNKEKKRPHTESPGRRSHRHSSG 258

Query: 101 EALQEREKAWGFPENATAPRSPSHSPEHRRTARRTPPGQQRPHPR------SPSREPRAE 154
            +      +      + +  SP H  E R+T  +   G + P P       SP R   + 
Sbjct: 259 SSHSPSLSSHYSDSRSPSRLSPKHRDEGRKTGSQRSSGSRSPSPSGGSGWGSPQRNGGSG 318

Query: 155 RKRPRMAPADSGPHRDPPTRTAPLPMPEGPEPAVPGEQPGRGHAHAAQGGPLLGQGCQGQ 214
           ++           H  P   ++P P       A     P RG    +       QG  G+
Sbjct: 319 QRSGAHGGRPGSAHSPPDKPSSPSPRVRDKAAAAAPTPPARGKESPSPRSAPSSQGRGGR 378

Query: 215 PQGEAVGSHSKGHKSSRGASAQKSP 239
             G A     +  +  R  S+  +P
Sbjct: 379 AAGGAGRRRRRRRRRRRSRSSASAP 403



 Score = 30.8 bits (68), Expect = 3.3
 Identities = 39/178 (21%), Positives = 60/178 (33%), Gaps = 54/178 (30%)

Query: 111 GFPENATAPRSPSHSPEHRRTAR-----RTPPGQQRPHPRSPSREPRAE----------- 154
           G PE  ++ RSP   P    ++R     R+   ++RPH  SPSR P  +           
Sbjct: 481 GGPEGKSSSRSPGPHPRSWSSSRSPSKSRSRSAEKRPH--SPSRSPSPKKPLSRDKDGEG 538

Query: 155 ----------------------RKRPRMAPADSGPHRDPPTRTAPL----PMPEGPEPAV 188
                                 RKR R +P+   P R    R  P+    P P      +
Sbjct: 539 RARHSEAEATRARRRSRSYSPIRKRRRDSPSFMEPRRITSARKRPIPYYRPSPSSSSSCL 598

Query: 189 PGEQPGRGHAHAAQGGPLLGQGCQGQPQGEAVGSHSKGHKSSRGASAQKSPPVQESQS 246
             +   R H+ +   G   G          +  S S G +S   + ++   P   S+S
Sbjct: 599 SSDYSTRSHSRSPSPGHSHG----------SYSSRSHGTRSRTRSPSRTPSPSYHSRS 646



 Score = 30.4 bits (67), Expect = 4.3
 Identities = 35/121 (28%), Positives = 51/121 (42%), Gaps = 27/121 (22%)

Query: 90  PEESASRQRFGEALQEREKAWGFPENATAPRSPSHSPEHRR------TARRTPPGQQRPH 143
           PE  + R   G   + +E+    P    A  SPS     RR      ++ R+P     PH
Sbjct: 443 PEPGSERGHGGHGKRAKERP---PRARPASTSPSPGAHGRRGGPEGKSSSRSP----GPH 495

Query: 144 PR--SPSREPRAERKRPRMAPADSGPHRDPPTRTAPLPMPEGPEPAVPGEQPGRGHAHAA 201
           PR  S SR P   R R     A+  PH   P+R+   P P+ P   +  ++ G G A  +
Sbjct: 496 PRSWSSSRSPSKSRSR----SAEKRPH--SPSRS---PSPKKP---LSRDKDGEGRARHS 543

Query: 202 Q 202
           +
Sbjct: 544 E 544



 Score = 30.0 bits (66), Expect = 5.7
 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 9/51 (17%)

Query: 464 RRQEKSAGAAD--PGNGEMEPAPKPAGSSQAPSGLGDGDGGSVSGGGSSNR 512
           R ++K+A AA   P  G+  P+P+ A SSQ       G GG  +GG    R
Sbjct: 344 RVRDKAAAAAPTPPARGKESPSPRSAPSSQ-------GRGGRAAGGAGRRR 387


>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
          Length = 904

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 50/187 (26%), Positives = 71/187 (37%), Gaps = 23/187 (12%)

Query: 81  RNTGPDPQDPEESASRQRFGEALQEREKAWGFPENATAPRSPSHSPEHRRTARRTPPGQQ 140
           R+  P P+  ++  S +        R +    P      RSPS +P  RR    TPP ++
Sbjct: 527 RSASPSPRKRQKETSPRG-------RRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRR 579

Query: 141 R-PHPRSPSREPRAERKRP----RMAPADSGPHRDPPTRTAPLPMPEGPEPAVPGEQPGR 195
           R P P    R P   R  P    R +P+       PP R    P P     A P   P R
Sbjct: 580 RTPSPPPRRRSPSPRRYSPPIQRRYSPS------PPPKRRTASPPPPPKRRASPSPPPKR 633

Query: 196 GHAHAAQGGPLLGQGCQGQPQGEAVGS-HSKGHKSSRGASAQKSPP--VQESQSERLQAA 252
             +H+    P        + +  ++ S H KG   SR     +SP    + S S R +A 
Sbjct: 634 RVSHSPP--PKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAP 691

Query: 253 GADSAGP 259
              S+ P
Sbjct: 692 QTSSSPP 698



 Score = 42.0 bits (97), Expect = 0.001
 Identities = 44/177 (24%), Positives = 69/177 (38%), Gaps = 38/177 (21%)

Query: 85  PDPQDP--EESASRQRFGEALQEREKAWGFPENATAPRSPSHSPEHRRTARRTPPGQQRP 142
           P+P++P  E+++ +++  E  + R ++     + +  R+ S SP H R  RR    + R 
Sbjct: 254 PEPKEPSPEKNSKKEKEKEKTRPRSRS----RSKSRSRTRSRSPSHTRPRRR---HRSRS 306

Query: 143 HPRSPSREPRAERKRPRMAPADSGPHRDPPTRTAPLPMPEGPEPAVPGEQPGRGHAHAAQ 202
              SP R P + R+RP            P  RT P  MP  P              H   
Sbjct: 307 RSYSPRRRP-SPRRRP-----------SPRRRTPPRRMPPPPR-------------HRRS 341

Query: 203 GGPLLGQGCQGQPQGEAVGSHSKGHKSSRGASAQKSPPVQESQSERLQAAGADSAGP 259
             P+     + +    ++   S    SSR  S  K PP + S   R     + SA P
Sbjct: 342 RSPVR----RRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASP 394



 Score = 40.8 bits (94), Expect = 0.003
 Identities = 37/185 (20%), Positives = 66/185 (35%), Gaps = 29/185 (15%)

Query: 86  DPQDPEESASRQRFGEALQEREKAWGFPENATAP------RSPSHSPEHRRTARRTPPGQ 139
           D ++ E S  ++    + + R+     P   ++P      RS S SP HR  +R   P  
Sbjct: 155 DKEEKESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAP 214

Query: 140 QRPHPRSPSREPRAERKRPRMAPADSGPHRDPPTRTAPLPMPEGPEPAVPGEQPGRGHAH 199
           ++        EP  + K P +  A S        +  P+P P+ P P             
Sbjct: 215 EKKEKTPELPEPSVKVKEPSVQEATSTSDILKVPKPEPIPEPKEPSPE------------ 262

Query: 200 AAQGGPLLGQGCQGQPQGEAVGSHSKGHKSSRGASAQKSPPVQESQSERLQAAGADSAGP 259
                    +  + + + E     S+    SR  +  +SP    ++  R   + + S  P
Sbjct: 263 ---------KNSKKEKEKEKTRPRSRSRSKSRSRTRSRSP--SHTRPRRRHRSRSRSYSP 311

Query: 260 KTVPS 264
           +  PS
Sbjct: 312 RRRPS 316



 Score = 39.3 bits (90), Expect = 0.009
 Identities = 42/174 (24%), Positives = 67/174 (38%), Gaps = 10/174 (5%)

Query: 93  SASRQRFGEALQEREKAWGFPENATAPRSPSHSPEHRRTARRTPPGQQRP---HPRSPSR 149
           S+S  R     ++  K    P   T   SPS SP  RR  R +PP    P   H  +P +
Sbjct: 361 SSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRH-RPSPPATPPPKTRHSPTPQQ 419

Query: 150 EPRAERKRPRMAPADSG----PHRDPPTRTAPLPMPEGPEPAVPGEQPGRGHAHAAQGGP 205
             R  + R  ++P  +      H+    R +P P P+  +  +   +  +G   AA    
Sbjct: 420 SNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADS- 478

Query: 206 LLGQGCQGQPQGEAVGSHSKGHKSSRGASAQKSPPVQESQSERLQAAGADSAGP 259
            + Q  Q + Q +   S S    SS     ++S         R + + + SA P
Sbjct: 479 -VQQRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASP 531



 Score = 35.8 bits (81), Expect = 0.10
 Identities = 33/113 (29%), Positives = 44/113 (38%), Gaps = 20/113 (17%)

Query: 80  DRNTGPDPQDPEESASRQRFGEALQEREKAWGFPENATAPRSPSHSPEHRRTARRTPPGQ 139
           D  +    +D     S  + GE  + R  +          RS S SP  +R    +P G+
Sbjct: 495 DSGSSSSSEDERPKRSHVKNGEVGRRRRHS--------PSRSASPSPR-KRQKETSPRGR 545

Query: 140 QRPHPRSPSREPRAERKRPRMAPADSGPHR-----DPPTRTAPLPMPEGPEPA 187
           +R   RSPS  P   R+ P  AP    P R      PP R  P P P    P+
Sbjct: 546 RR---RSPSPPPTRRRRSPSPAPP---PRRRRTPTPPPRRRTPSPPPRRRSPS 592



 Score = 35.4 bits (80), Expect = 0.14
 Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 14/109 (12%)

Query: 81  RNTGPDPQDPEESAS-----RQRFGEALQEREKAWGFPENATAPRSPSHSPEHRR--TAR 133
           R T   P  P+  AS     ++R   +   ++++       T  RSPS S +HR+  +  
Sbjct: 612 RRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRS----SPVTKRRSPSLSSKHRKGSSPS 667

Query: 134 RTPPGQQRPHPR---SPSREPRAERKRPRMAPADSGPHRDPPTRTAPLP 179
           R+    + P P    SPS  PRA +      P   G    P  R +P P
Sbjct: 668 RSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSP 716



 Score = 33.1 bits (74), Expect = 0.67
 Identities = 45/179 (25%), Positives = 63/179 (35%), Gaps = 28/179 (15%)

Query: 81  RNTGPDPQDPEESASRQRFGEALQEREKAWGFPENATAPRSPSHSPEHRRTARRTPPGQQ 140
           R T P    P     R R     + R  A     ++++  S S SP  ++  +RT    +
Sbjct: 325 RRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPP-KKPPKRTSSPPR 383

Query: 141 RPHPRSPSREPRAERKRPRMAPADSGPHRDPPTRTAPLPMPEGPEPAVPGEQPGRGHAHA 200
           +    SPS  P   R RP        P   PP +T   P P         +Q  R     
Sbjct: 384 KTRRLSPSASPPRRRHRP-------SPPATPPPKTRHSPTP---------QQSNRTRKSR 427

Query: 201 AQGGPLLGQGCQGQPQGEAVGSHSKGHKSSRGASAQKSPPVQESQSERLQA---AGADS 256
               P       G+  G+ V  H    K    + A K   V+ S+SE  +    A ADS
Sbjct: 428 VSVSP-------GRTSGK-VTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADS 478


>gi|236459851 ubinuclein 2 [Homo sapiens]
          Length = 1347

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 8/101 (7%)

Query: 103 LQEREKAWGFPENATA-PRSPSH-SPE-HRRTARRTPPGQQRPHPRSPSREPRAERKRPR 159
           ++ RE  +  PE     PR P    P+ +R  AR  PP  + P PRS ++ P  E+  P+
Sbjct: 15  VRRREAEYPGPEREPEYPREPPRLEPQPYREPARAEPPAPREPAPRSDAQPPSREKPLPQ 74

Query: 160 MAPADSGP----HRDPPTRTAPLPMPEGP-EPAVPGEQPGR 195
              + + P     R+PP    P P P  P +P  P E   R
Sbjct: 75  REVSRAEPPMSLQREPPRPEPPPPFPPLPLQPPPPRESASR 115



 Score = 38.5 bits (88), Expect = 0.016
 Identities = 26/66 (39%), Positives = 33/66 (50%), Gaps = 6/66 (9%)

Query: 123 SHSPEHRRTARRTPPGQQRPHPRSPSR-EPRAERKRPRM---APADSGPHRD--PPTRTA 176
           S SP  RR A    P ++  +PR P R EP+  R+  R    AP +  P  D  PP+R  
Sbjct: 11  SLSPVRRREAEYPGPEREPEYPREPPRLEPQPYREPARAEPPAPREPAPRSDAQPPSREK 70

Query: 177 PLPMPE 182
           PLP  E
Sbjct: 71  PLPQRE 76



 Score = 33.9 bits (76), Expect = 0.39
 Identities = 34/114 (29%), Positives = 47/114 (41%), Gaps = 18/114 (15%)

Query: 84  GPDPQDPEESASRQRFGEALQEREKAWGFPENATAPRSPSHSPEHRRTARRTPPGQQRPH 143
           GP+ ++PE      R  E    RE A   P    APR P+   + +      PP +++P 
Sbjct: 24  GPE-REPEYPREPPRL-EPQPYREPARAEPP---APREPAPRSDAQ------PPSREKPL 72

Query: 144 PRSPSREPRAERKRPRMAPADSGPHRDPPTRTAPLPMPEGP--EPAVPGEQPGR 195
           P     +    R  P M+     P  +PP    PLP+   P  E A   EQP R
Sbjct: 73  P-----QREVSRAEPPMSLQREPPRPEPPPPFPPLPLQPPPPRESASRAEQPPR 121


>gi|9945318 MAX binding protein [Homo sapiens]
          Length = 582

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 35/153 (22%), Positives = 55/153 (35%), Gaps = 6/153 (3%)

Query: 54  KRLRKHQHVGDFARDLAARWKKLVLVDRNTGPDPQDPEESASRQRFGEALQEREKAWGFP 113
           +++   Q + +   +L+ +W  ++ +DR      Q  ++ AS     E     ++     
Sbjct: 288 EKIATQQRLAELKHELS-QWMDVLEIDRVLRQTGQPEDDQASTSTASEGEDNIDEDMEED 346

Query: 114 ENATAPRSPSHSPEHRRTARRTPPGQQRPHPRSPSREPRAERKRPRMAPADSGPHRDPPT 173
                P   SH P+        PP    P P  P   P        + PA     +  P 
Sbjct: 347 RAGLGPPKLSHRPQPELLKSTLPPPSTTPAPLPP--HPHPHPHSVALPPAHLPVQQQQPQ 404

Query: 174 RTAPLPMPEGPEPAVPGEQ--PGRGHAHAAQGG 204
           +  PLP P  P PA P +   P   H  A  GG
Sbjct: 405 QKTPLPAPP-PPPAAPAQTLVPAPAHLVATAGG 436


>gi|157671951 solute carrier family 4, anion exchanger, member 3
           isoform 1 [Homo sapiens]
          Length = 1232

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 83/365 (22%), Positives = 129/365 (35%), Gaps = 72/365 (19%)

Query: 85  PDPQDPEESASR----QRFGEALQEREKAWGFPENATAP---------RSPSHSPEHRRT 131
           PD ++ ++   +     RFG+ +  +  AW  PE  +           R  SH   H  +
Sbjct: 29  PDVEEEDDDLGKTLAVSRFGDLIS-KPPAWD-PEKPSRSYSERDFEFHRHTSHHTHHPLS 86

Query: 132 ARRTPPGQQRPHPRSPSREPRAERKRPRMAPADSGPHRDPPTRTAPLPMPEG-----PEP 186
           AR  PP + R  P + +R  R +RK+ + +         PP+   P    EG      E 
Sbjct: 87  ARLPPPHKLRRLPPTSARHTRRKRKKEKTSA--------PPSEGTPPIQEEGGAGVDEEE 138

Query: 187 AVPGEQPGRGHAHAAQGGPLLGQGCQGQPQGE--AVGSHSKGHKSSRGASAQKSP----- 239
               E+ G   A   +  P       G PQ    ++GS         G +A   P     
Sbjct: 139 EEEEEEEGESEAEPVEPPP------SGTPQKAKFSIGSDEDDSPGLPGRAAVTKPLPSVG 192

Query: 240 ------PVQESQSERLQAAGADSAGPKTVPSHVFSELWDPSEAWMQANYDL---LSAFEA 290
                 P   S S   +A  +  AG K+ P       W PS     A+YDL   L    A
Sbjct: 193 PHTDKSPQHSSSSPSPRARASRLAGEKSRP-------WSPS-----ASYDLRERLCPGSA 240

Query: 291 MTSQANPEALSAPTLQEEAAFPGRRVNAKMPVYSGSRPACQLQVPTLRQQCLRVPRNNPD 350
           + +   PE    PT + EA   G   +A +      R       P +R+  ++ P     
Sbjct: 241 LGNPGGPEQ-QVPTDEAEAQMLG---SADLDDMKSHRLE---DNPGVRRHLVKKPSRTQG 293

Query: 351 ALGDVEGVPYSVLEPVLEGWTPDQPYR--TEKDNAALARETDELWRIHCLQ-DFKEEKPQ 407
             G   G+   +     +     +P+    E +   L R  +  WR       F+E+  +
Sbjct: 294 GRGSPSGLAPILRRKKKKKKLDRRPHEVFVELNELMLDRSQEPHWRETARWIKFEEDVEE 353

Query: 408 EHESW 412
           E E W
Sbjct: 354 ETERW 358


>gi|169163728 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 237

 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 50/162 (30%), Positives = 63/162 (38%), Gaps = 22/162 (13%)

Query: 116 ATAPRSPSHSPEHRRTAR-RTPPGQQRPHPRSPSREPRAERKRPRMAPADSGPHRDPPTR 174
           A A R P   P   +T       G++R  PR P R P A R RPR AP      R     
Sbjct: 82  ARAARGPPKRPAGGQTGGVEAASGEERSQPRRPRRPPPAPR-RPRPAPG----RRKSLYE 136

Query: 175 TAPLPMPE-GPEPAVPGEQPGRG--HAHAAQGGPLLGQG--------CQGQPQGEAVGSH 223
            APL   E G      G++ G G  H H A+ G   G G          G  +G   G  
Sbjct: 137 AAPLLTREKGGRSGRRGDRGGSGWSHGHTARVG---GTGDSSAGLTTFPGSSRGGFSGRE 193

Query: 224 SKGHKSSRGASAQKSPPVQESQSERL--QAAGADSAGPKTVP 263
            +  +  R  S Q+S P   + S R   +   A  AGP+  P
Sbjct: 194 EEPRRERRQPSLQRSTPPAPTYSPRSDPRDPAAPRAGPEAPP 235



 Score = 33.9 bits (76), Expect = 0.39
 Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 5/58 (8%)

Query: 135 TPPGQQRPHPRSPSREPRAERKRPRMA----PADS-GPHRDPPTRTAPLPMPEGPEPA 187
           T PG  R        EPR ER++P +     PA +  P  DP    AP   PE P PA
Sbjct: 180 TFPGSSRGGFSGREEEPRRERRQPSLQRSTPPAPTYSPRSDPRDPAAPRAGPEAPPPA 237



 Score = 33.5 bits (75), Expect = 0.51
 Identities = 44/163 (26%), Positives = 55/163 (33%), Gaps = 34/163 (20%)

Query: 119 PRSPSHSPEHRRTARRTPPGQQRPHPR----SPSREPRAERKRPRMAPADSGPHRDP--- 171
           P SP      R T  R   G + P P     + +R PR  RKR   A A  GP + P   
Sbjct: 36  PPSPVGRARRRGTWLRVLRGPRAPSPAPALPARARPPRENRKRAVPARAARGPPKRPAGG 95

Query: 172 ----------PTRTAP-LPMPEGPEPAVPGEQPGRGHAHAAQGGPLLGQGCQGQPQGEAV 220
                       R+ P  P    P P  P   PGR      +  PLL +   G+      
Sbjct: 96  QTGGVEAASGEERSQPRRPRRPPPAPRRPRPAPGR-RKSLYEAAPLLTREKGGR------ 148

Query: 221 GSHSKGHKSSRGASAQKSPPVQESQSERLQAAGADSAGPKTVP 263
                G +  RG S           + R+   G  SAG  T P
Sbjct: 149 ----SGRRGDRGGSGW-----SHGHTARVGGTGDSSAGLTTFP 182


>gi|169163708 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 237

 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 50/162 (30%), Positives = 63/162 (38%), Gaps = 22/162 (13%)

Query: 116 ATAPRSPSHSPEHRRTAR-RTPPGQQRPHPRSPSREPRAERKRPRMAPADSGPHRDPPTR 174
           A A R P   P   +T       G++R  PR P R P A R RPR AP      R     
Sbjct: 82  ARAARGPPKRPAGGQTGGVEAASGEERSQPRRPRRPPPAPR-RPRPAPG----RRKSLYE 136

Query: 175 TAPLPMPE-GPEPAVPGEQPGRG--HAHAAQGGPLLGQG--------CQGQPQGEAVGSH 223
            APL   E G      G++ G G  H H A+ G   G G          G  +G   G  
Sbjct: 137 AAPLLTREKGGRSGRRGDRGGSGWSHGHTARVG---GTGDSSAGLTTFPGSSRGGFSGRE 193

Query: 224 SKGHKSSRGASAQKSPPVQESQSERL--QAAGADSAGPKTVP 263
            +  +  R  S Q+S P   + S R   +   A  AGP+  P
Sbjct: 194 EEPRRERRQPSLQRSTPPAPTYSPRSDPRDPAAPRAGPEAPP 235



 Score = 33.9 bits (76), Expect = 0.39
 Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 5/58 (8%)

Query: 135 TPPGQQRPHPRSPSREPRAERKRPRMA----PADS-GPHRDPPTRTAPLPMPEGPEPA 187
           T PG  R        EPR ER++P +     PA +  P  DP    AP   PE P PA
Sbjct: 180 TFPGSSRGGFSGREEEPRRERRQPSLQRSTPPAPTYSPRSDPRDPAAPRAGPEAPPPA 237



 Score = 33.5 bits (75), Expect = 0.51
 Identities = 44/163 (26%), Positives = 55/163 (33%), Gaps = 34/163 (20%)

Query: 119 PRSPSHSPEHRRTARRTPPGQQRPHPR----SPSREPRAERKRPRMAPADSGPHRDP--- 171
           P SP      R T  R   G + P P     + +R PR  RKR   A A  GP + P   
Sbjct: 36  PPSPVGRARRRGTWLRVLRGPRAPSPAPALPARARPPRENRKRAVPARAARGPPKRPAGG 95

Query: 172 ----------PTRTAP-LPMPEGPEPAVPGEQPGRGHAHAAQGGPLLGQGCQGQPQGEAV 220
                       R+ P  P    P P  P   PGR      +  PLL +   G+      
Sbjct: 96  QTGGVEAASGEERSQPRRPRRPPPAPRRPRPAPGR-RKSLYEAAPLLTREKGGR------ 148

Query: 221 GSHSKGHKSSRGASAQKSPPVQESQSERLQAAGADSAGPKTVP 263
                G +  RG S           + R+   G  SAG  T P
Sbjct: 149 ----SGRRGDRGGSGW-----SHGHTARVGGTGDSSAGLTTFP 182


>gi|145580582 uromodulin-like 1 isoform 2 precursor [Homo sapiens]
          Length = 1446

 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 41/197 (20%), Positives = 69/197 (35%), Gaps = 18/197 (9%)

Query: 137 PGQQRPHPRSPSREPRAERKRPRMAPADSGPHRDPPTRTAPLPMPEGPEPAVPGEQPGRG 196
           P Q  P   SPS+    +    + +P+     +  P++  P              Q    
Sbjct: 648 PSQVNPSQGSPSQGSLRQESTSQASPSQRSTSQGSPSQVNP-------------SQRSTS 694

Query: 197 HAHAAQGGPLLGQGCQGQPQGEAVGSHSKGHKSSRGASAQKSPPVQESQSERLQAAGADS 256
           HA+++QG P  G   Q  P   +    S  H+++ G     S P     +        D 
Sbjct: 695 HANSSQGSPSQGSPSQESPSQGSTSQASPSHRNTIGVIGTTSSPKATGSTHSFPPGATD- 753

Query: 257 AGPKTVPSHVFSELWDPSEAWMQANYDLLSAFEAMTSQANPEALSAPT-LQEEAAFPGRR 315
            GP  +P  +         +W     D    F    +++  E L  PT L+ E + P   
Sbjct: 754 -GPLALPGQLQGNSIMEPPSWPSPTEDPTGHFLWHATRSTRETLLNPTWLRNEDSGPSGS 812

Query: 316 VNAKM--PVYSGSRPAC 330
           V+  +   + +   PAC
Sbjct: 813 VDLPLTSTLTALKTPAC 829



 Score = 31.6 bits (70), Expect = 2.0
 Identities = 27/113 (23%), Positives = 44/113 (38%), Gaps = 4/113 (3%)

Query: 85  PDPQDPEESASRQRFGEALQ--EREKAWGFPENAT-APRSPSHSPEHRRTARRTPPGQQR 141
           P    P + + RQ         +R  + G P     + RS SH+   + +  +  P Q+ 
Sbjct: 653 PSQGSPSQGSLRQESTSQASPSQRSTSQGSPSQVNPSQRSTSHANSSQGSPSQGSPSQES 712

Query: 142 PHPRSPSREPRAERKRPRMAPADSGPHRDPPTRTAPLPMPEGPEPAVPGEQPG 194
           P   S S+   + R    +    S P     T + P    +GP  A+PG+  G
Sbjct: 713 PSQGSTSQASPSHRNTIGVIGTTSSPKATGSTHSFPPGATDGP-LALPGQLQG 764



 Score = 30.4 bits (67), Expect = 4.3
 Identities = 32/116 (27%), Positives = 41/116 (35%), Gaps = 20/116 (17%)

Query: 182 EGPEPAVPGEQPGRGHAHAAQGGPLLGQGCQGQPQGEAVGSHSKGHKSSRGASAQKSPPV 241
           +G E  VP   PG G     QG P      QG P   ++   S    S    S  +  P 
Sbjct: 628 KGVEQEVPSTAPGLG---MDQGSPSQVNPSQGSPSQGSLRQESTSQASPSQRSTSQGSPS 684

Query: 242 QESQSERLQAAGADSAGPKTVPSHVFSELWDPSEAWMQANYDLLSAFEAMTSQANP 297
           Q + S+R               SH  S    PS    Q +    S  +  TSQA+P
Sbjct: 685 QVNPSQR-------------STSHANSSQGSPS----QGSPSQESPSQGSTSQASP 723


>gi|28559071 DNA cytosine methyltransferase 3 alpha isoform c [Homo
           sapiens]
          Length = 166

 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 51/169 (30%), Positives = 66/169 (39%), Gaps = 30/169 (17%)

Query: 105 EREKAWGFPENATAPRSPSHSPEHRRTARRTP-PGQQRPHPRSPS----REPRAERKRPR 159
           ERE+     E    PR      E   TAR+   PG++R HP   S    ++P    K P 
Sbjct: 18  EREEDRKDGEEQEEPRGKEERQEPSTTARKVGRPGRKRKHPPVESGDTPKDPAVISKSPS 77

Query: 160 MAPADSG-----PHRDPPTRTAPLPMPEGPEPAVPGEQPGRGHAHAAQGGPLLGQGCQGQ 214
           MA  DSG     P+ D   R+ P P    P     G  P  G   AA+  P         
Sbjct: 78  MAQ-DSGASELLPNGDLEKRSEPQPEEGSPAGGQKGGAPAEGEG-AAETLP--------- 126

Query: 215 PQGEAVGSHSKGHKSSRGASAQKSPPVQESQSERLQAAGADSAGPKTVP 263
               AV +     K  RGA      P +  +S    A GA S+GP ++P
Sbjct: 127 EASRAVENGCCTPKEGRGA------PAEAGESS---APGAASSGPTSIP 166


>gi|219804203 rabphilin 3A homolog isoform 1 [Homo sapiens]
          Length = 694

 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 51/225 (22%), Positives = 80/225 (35%), Gaps = 26/225 (11%)

Query: 81  RNTGPDPQD---------PEESASRQRFGEALQEREKAWGFPENA-TAPRSPS--HSPEH 128
           + TGPDP           P   AS  R   + ++ E +W     A  + RSP+       
Sbjct: 214 QKTGPDPASAPGRGNYGPPVRRASEARMSSSSRDSE-SWDHSGGAGDSSRSPAGLRRANS 272

Query: 129 RRTARRTPPGQQRPHPRSPSREPRAERKRPRMAPADSGPHRDPPTRTAPLPMPEGPEPAV 188
            + +R  P   Q P P  P +       RP   PA   P + P         P  P    
Sbjct: 273 VQASRPAPGSVQSPAPPQPGQPGTPGGSRPGPGPAGRFPDQKPEV------APSDPGTTA 326

Query: 189 PGEQPGRGHAHAAQGGPLLGQGCQGQPQGEAVGSHSKGHKSSRGASAQKSPPVQESQSER 248
           P  +   G      G P +  G +        G +S+   ++   +A + PP  E + E 
Sbjct: 327 PPREERTG---GVGGYPAV--GAREDRMSHPSGPYSQASAAAPQPAAARQPPPPEEEEEE 381

Query: 249 LQAAGADSAGPKTVPSHVFSELWDPSEAWMQANYDLLSAFEAMTS 293
             +  +D A   T+ +  FS L+D   + +Q         + M S
Sbjct: 382 ANSYDSDEA--TTLGALEFSLLYDQDNSSLQCTIIKAKGLKPMDS 424



 Score = 37.7 bits (86), Expect = 0.027
 Identities = 36/146 (24%), Positives = 57/146 (39%), Gaps = 28/146 (19%)

Query: 105 EREKAW---GFPENATAPRSPSHSPEHRR-TARRTPPGQQRPHPRSPSREPRAERKRPRM 160
           +R  AW   GFP+       P    + ++  +    P Q  P P+ P+R P         
Sbjct: 151 KRSGAWFFKGFPKQVLPQPMPIKKTKPQQPVSEPAAPEQPAPEPKHPARAP--------- 201

Query: 161 APADSGPHRDPPTRTAPLPMPEGPEPAVPGEQPGRGHAHAAQGGPLLGQGCQGQPQGEAV 220
           A  DS   R P  +T       GP+PA     PGRG+      GP + +  + +    + 
Sbjct: 202 ARGDSEDRRGPGQKT-------GPDPA---SAPGRGNY-----GPPVRRASEARMSSSSR 246

Query: 221 GSHSKGHKSSRGASAQKSPPVQESQS 246
            S S  H    G S++    ++ + S
Sbjct: 247 DSESWDHSGGAGDSSRSPAGLRRANS 272


>gi|45267837 rabphilin 3A homolog isoform 2 [Homo sapiens]
          Length = 690

 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 51/225 (22%), Positives = 80/225 (35%), Gaps = 26/225 (11%)

Query: 81  RNTGPDPQD---------PEESASRQRFGEALQEREKAWGFPENA-TAPRSPS--HSPEH 128
           + TGPDP           P   AS  R   + ++ E +W     A  + RSP+       
Sbjct: 210 QKTGPDPASAPGRGNYGPPVRRASEARMSSSSRDSE-SWDHSGGAGDSSRSPAGLRRANS 268

Query: 129 RRTARRTPPGQQRPHPRSPSREPRAERKRPRMAPADSGPHRDPPTRTAPLPMPEGPEPAV 188
            + +R  P   Q P P  P +       RP   PA   P + P         P  P    
Sbjct: 269 VQASRPAPGSVQSPAPPQPGQPGTPGGSRPGPGPAGRFPDQKPEV------APSDPGTTA 322

Query: 189 PGEQPGRGHAHAAQGGPLLGQGCQGQPQGEAVGSHSKGHKSSRGASAQKSPPVQESQSER 248
           P  +   G      G P +  G +        G +S+   ++   +A + PP  E + E 
Sbjct: 323 PPREERTG---GVGGYPAV--GAREDRMSHPSGPYSQASAAAPQPAAARQPPPPEEEEEE 377

Query: 249 LQAAGADSAGPKTVPSHVFSELWDPSEAWMQANYDLLSAFEAMTS 293
             +  +D A   T+ +  FS L+D   + +Q         + M S
Sbjct: 378 ANSYDSDEA--TTLGALEFSLLYDQDNSSLQCTIIKAKGLKPMDS 420



 Score = 37.7 bits (86), Expect = 0.027
 Identities = 36/146 (24%), Positives = 57/146 (39%), Gaps = 28/146 (19%)

Query: 105 EREKAW---GFPENATAPRSPSHSPEHRR-TARRTPPGQQRPHPRSPSREPRAERKRPRM 160
           +R  AW   GFP+       P    + ++  +    P Q  P P+ P+R P         
Sbjct: 147 KRSGAWFFKGFPKQVLPQPMPIKKTKPQQPVSEPAAPEQPAPEPKHPARAP--------- 197

Query: 161 APADSGPHRDPPTRTAPLPMPEGPEPAVPGEQPGRGHAHAAQGGPLLGQGCQGQPQGEAV 220
           A  DS   R P  +T       GP+PA     PGRG+      GP + +  + +    + 
Sbjct: 198 ARGDSEDRRGPGQKT-------GPDPA---SAPGRGNY-----GPPVRRASEARMSSSSR 242

Query: 221 GSHSKGHKSSRGASAQKSPPVQESQS 246
            S S  H    G S++    ++ + S
Sbjct: 243 DSESWDHSGGAGDSSRSPAGLRRANS 268


>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
           subunit [Homo sapiens]
          Length = 551

 Score = 42.7 bits (99), Expect = 8e-04
 Identities = 34/96 (35%), Positives = 38/96 (39%), Gaps = 10/96 (10%)

Query: 112 FPENATAPRSPSHSPEHRRTARRTPPGQQRPHPRS--PSREPRAERKRPRMAPADSGPHR 169
           FP   T PR P   P         PPGQ  P P +  P+R  R     P + P    P  
Sbjct: 230 FPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPP--PVLFPGQ--PFG 285

Query: 170 DPPTRTAPLPMPEGPEPAVPGEQPGRGHAHAAQGGP 205
            PP      P+P GP P VPG  P  G     QG P
Sbjct: 286 QPPLG----PLPPGPPPPVPGYGPPPGPPPPQQGPP 317


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.311    0.128    0.382 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,924,136
Number of Sequences: 37866
Number of extensions: 1621889
Number of successful extensions: 14679
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 214
Number of HSP's successfully gapped in prelim test: 1190
Number of HSP's that attempted gapping in prelim test: 10479
Number of HSP's gapped (non-prelim): 4502
length of query: 546
length of database: 18,247,518
effective HSP length: 107
effective length of query: 439
effective length of database: 14,195,856
effective search space: 6231980784
effective search space used: 6231980784
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.