Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ZNF207 Sequence: fasta or formatted (494aa) NCBI GI: 148612835
Description:

zinc finger protein 207 isoform c

Referenced in:

Zinc Finger Proteins

Other entries for this name:
alt prot [478aa] zinc finger protein 207 isoform a
alt prot [463aa] zinc finger protein 207 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         34           2
 C cysteine            1.2          6           1
 D aspartate           3.4         17           4
 E glutamate           3.2         16           2
 F phenylalanine       1.6          8           1
 G glycine             9.7         48           2
 H histidine           2.4         12           2
 I isoleucine          4.3         21           1
 K lysine              5.3         26           4
 L leucine             4.7         23           2
 M methionine          6.3         31           2
 N asparagine          1.8          9           1
 P proline            19.2         95           3
 Q glutamine           7.5         37           3
 R arginine            3.4         17           3
 S serine              6.1         30           3
 T threonine           6.7         33           3
 V valine              3.2         16           1
 W tryptophan          0.4          2           1
 Y tyrosine            2.6         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 207 isoform c 
ZNF207                0.955   zinc finger protein 207 isoform a 
ZNF207                0.931   zinc finger protein 207 isoform b 
PRB2                  0.068   proline-rich protein BstNI subfamily 2 
NACA                  0.064   nascent polypeptide-associated complex alpha subuni...
WBP11                 0.063   WW domain binding protein 11 
FMN2                  0.060   formin 2 
TCERG1                0.058   transcription elongation regulator 1 isoform 2 [Homo...
ATN1                  0.053   atrophin-1 
ATN1                  0.053   atrophin-1 
CPSF6                 0.052   cleavage and polyadenylation specific factor 6, 68 ...
SF3A2                 0.052   splicing factor 3a, subunit 2 
RAPH1                 0.051   Ras association and pleckstrin homology domains 1 is...
BAT2                  0.051   HLA-B associated transcript-2 
SFRS15                0.050   splicing factor, arginine/serine-rich 15 isoform 2 ...
SFRS15                0.050   splicing factor, arginine/serine-rich 15 isoform 1 [...
TCERG1                0.050   transcription elongation regulator 1 isoform 1 [Homo...
SFRS15                0.049   splicing factor, arginine/serine-rich 15 isoform 3 ...
PRB1                  0.049   proline-rich protein BstNI subfamily 1 isoform 1 pre...
YLPM1                 0.049   YLP motif containing 1 
MUC2                  0.049   mucin 2 precursor 
COL4A5                0.048   type IV collagen alpha 5 isoform 2 precursor 
COL4A5                0.048   type IV collagen alpha 5 isoform 1 precursor 
COL4A5                0.048   type IV collagen alpha 5 isoform 3 precursor 
MBD6                  0.048   methyl-CpG binding domain protein 6 
WNK2                  0.047   WNK lysine deficient protein kinase 2 
RERE                  0.045   atrophin-1 like protein isoform b 
RERE                  0.045   atrophin-1 like protein isoform a 
RERE                  0.045   atrophin-1 like protein isoform a 
FLJ22184              0.044   PREDICTED: hypothetical protein FLJ22184 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press