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Search of human proteins with 154350236
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|154350236 hypothetical protein LOC56204 [Homo sapiens]
(1076 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|154350236 hypothetical protein LOC56204 [Homo sapiens] 2179 0.0
gi|33636717 hypothetical protein LOC80256 [Homo sapiens] 250 4e-66
gi|62243484 sarcoma antigen NY-SAR-41 [Homo sapiens] 53 2e-06
gi|34878904 synaptonemal complex protein 1 [Homo sapiens] 52 2e-06
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens] 47 1e-04
gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens] 45 3e-04
gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1... 43 0.001
gi|38045898 RAB6-interacting protein 2 isoform epsilon [Homo sap... 40 0.009
gi|38045896 RAB6-interacting protein 2 isoform delta [Homo sapiens] 40 0.009
gi|41152076 steroid-sensitive protein 1 [Homo sapiens] 40 0.012
gi|41152074 steroid-sensitive protein 1 [Homo sapiens] 40 0.012
gi|116174736 sentrin/SUMO-specific protease 7 isoform 2 [Homo sa... 40 0.015
gi|134948605 ankyrin repeat domain 12 isoform 2 [Homo sapiens] 39 0.026
gi|134948558 ankyrin repeat domain 12 isoform 1 [Homo sapiens] 39 0.026
gi|20270337 Leo1, Paf1/RNA polymerase II complex component, homo... 39 0.034
gi|57232746 nuclear receptor interacting protein 1 [Homo sapiens] 38 0.059
gi|183396804 Regulation of nuclear pre-mRNA domain containing 2 ... 37 0.077
gi|116174746 sentrin/SUMO-specific protease 7 isoform 1 [Homo sa... 37 0.10
gi|237858621 polyamine modulated factor 1 binding protein 1 isof... 37 0.10
gi|237858619 polyamine modulated factor 1 binding protein 1 isof... 37 0.10
gi|158534055 round spermatid basic protein 1-like [Homo sapiens] 37 0.10
gi|146133848 golgi autoantigen, golgin subfamily a, 6 [Homo sapi... 37 0.10
gi|38044112 restin isoform b [Homo sapiens] 37 0.13
gi|4506751 restin isoform a [Homo sapiens] 37 0.13
gi|27436910 partner and localizer of BRCA2 [Homo sapiens] 36 0.17
gi|68508961 centromere protein C 1 [Homo sapiens] 36 0.17
gi|42560244 peptidylprolyl isomerase G [Homo sapiens] 36 0.17
gi|130484567 HFM1 protein [Homo sapiens] 36 0.17
gi|38788333 remodeling and spacing factor 1 [Homo sapiens] 36 0.22
gi|55770834 centromere protein F [Homo sapiens] 36 0.22
>gi|154350236 hypothetical protein LOC56204 [Homo sapiens]
Length = 1076
Score = 2179 bits (5647), Expect = 0.0
Identities = 1076/1076 (100%), Positives = 1076/1076 (100%)
Query: 1 MKPDRDTLDEYFEYDAEEFLVSLALLITEGRTPECSVKGRTESFHCPPAQSCYPVTTKHE 60
MKPDRDTLDEYFEYDAEEFLVSLALLITEGRTPECSVKGRTESFHCPPAQSCYPVTTKHE
Sbjct: 1 MKPDRDTLDEYFEYDAEEFLVSLALLITEGRTPECSVKGRTESFHCPPAQSCYPVTTKHE 60
Query: 61 CSDKLAQCRQARRTRSEVTLLWKNNLPIMVEMMLLPDCCYSDDGPTTEGIDLNDPAIKQD 120
CSDKLAQCRQARRTRSEVTLLWKNNLPIMVEMMLLPDCCYSDDGPTTEGIDLNDPAIKQD
Sbjct: 61 CSDKLAQCRQARRTRSEVTLLWKNNLPIMVEMMLLPDCCYSDDGPTTEGIDLNDPAIKQD 120
Query: 121 ALLLERWILEPVPRQNGDRFIEEKTLLLAVRSFVFFSQLSAWLSVSHGAIPRNILYRISA 180
ALLLERWILEPVPRQNGDRFIEEKTLLLAVRSFVFFSQLSAWLSVSHGAIPRNILYRISA
Sbjct: 121 ALLLERWILEPVPRQNGDRFIEEKTLLLAVRSFVFFSQLSAWLSVSHGAIPRNILYRISA 180
Query: 181 ADVDLQWNFSQTPIEHVFPVPNVSHNVALKVSVQSLPRQSNYPVLTCSIHTNIGLYEKRI 240
ADVDLQWNFSQTPIEHVFPVPNVSHNVALKVSVQSLPRQSNYPVLTCSIHTNIGLYEKRI
Sbjct: 181 ADVDLQWNFSQTPIEHVFPVPNVSHNVALKVSVQSLPRQSNYPVLTCSIHTNIGLYEKRI 240
Query: 241 QQHKLKTHQHHNPNEAEQCGTNSSQRLCSKQTWTMAPESVLHAKSGPSPEYTAAVKNIKL 300
QQHKLKTHQHHNPNEAEQCGTNSSQRLCSKQTWTMAPESVLHAKSGPSPEYTAAVKNIKL
Sbjct: 241 QQHKLKTHQHHNPNEAEQCGTNSSQRLCSKQTWTMAPESVLHAKSGPSPEYTAAVKNIKL 300
Query: 301 YPGTGSKSDHGTSQANILGFSGIGDIKSQETSVRTLKSFSMVDSSISNRQSFWQSAGETN 360
YPGTGSKSDHGTSQANILGFSGIGDIKSQETSVRTLKSFSMVDSSISNRQSFWQSAGETN
Sbjct: 301 YPGTGSKSDHGTSQANILGFSGIGDIKSQETSVRTLKSFSMVDSSISNRQSFWQSAGETN 360
Query: 361 PLIGSLIQERQEIIARIAQHLIHCDPSTSHVSGRPFNTQESSSLHSKLFRVSQENENVGK 420
PLIGSLIQERQEIIARIAQHLIHCDPSTSHVSGRPFNTQESSSLHSKLFRVSQENENVGK
Sbjct: 361 PLIGSLIQERQEIIARIAQHLIHCDPSTSHVSGRPFNTQESSSLHSKLFRVSQENENVGK 420
Query: 421 GKEAFSMTFGSPEFSSPEDTNEGKIRLKPETPRSETCISNDFYSHMPVGETNPLIGSLLQ 480
GKEAFSMTFGSPEFSSPEDTNEGKIRLKPETPRSETCISNDFYSHMPVGETNPLIGSLLQ
Sbjct: 421 GKEAFSMTFGSPEFSSPEDTNEGKIRLKPETPRSETCISNDFYSHMPVGETNPLIGSLLQ 480
Query: 481 ERQDVIARIAQHLEHIDPTASHIPRQSFNMHDSSSVASKVFRSSYEDKNLLKKNKDESSV 540
ERQDVIARIAQHLEHIDPTASHIPRQSFNMHDSSSVASKVFRSSYEDKNLLKKNKDESSV
Sbjct: 481 ERQDVIARIAQHLEHIDPTASHIPRQSFNMHDSSSVASKVFRSSYEDKNLLKKNKDESSV 540
Query: 541 SISHTKCSLLGDISDGKNLVPNKCFTSFKNNSKEKCSLKHQTRNQCQNNPSEIIQSTYQE 600
SISHTKCSLLGDISDGKNLVPNKCFTSFKNNSKEKCSLKHQTRNQCQNNPSEIIQSTYQE
Sbjct: 541 SISHTKCSLLGDISDGKNLVPNKCFTSFKNNSKEKCSLKHQTRNQCQNNPSEIIQSTYQE 600
Query: 601 TQNKSSSLSTSSILSQHKENNLDLTSRFKEQEMSNGIDKQYSNCTTIDKQICTNKYKEKI 660
TQNKSSSLSTSSILSQHKENNLDLTSRFKEQEMSNGIDKQYSNCTTIDKQICTNKYKEKI
Sbjct: 601 TQNKSSSLSTSSILSQHKENNLDLTSRFKEQEMSNGIDKQYSNCTTIDKQICTNKYKEKI 660
Query: 661 INENYNPKFFGNLQSDDSKKNDSKIKVTVLEMSEYLNKYESMSSNKDSKRPKTCEQNTQL 720
INENYNPKFFGNLQSDDSKKNDSKIKVTVLEMSEYLNKYESMSSNKDSKRPKTCEQNTQL
Sbjct: 661 INENYNPKFFGNLQSDDSKKNDSKIKVTVLEMSEYLNKYESMSSNKDSKRPKTCEQNTQL 720
Query: 721 NSIENYLNKDNEGFKCKKSDQLKNEQDKQEDPTNEKSQNYSQRRSIKDCLSTCEQPKNTE 780
NSIENYLNKDNEGFKCKKSDQLKNEQDKQEDPTNEKSQNYSQRRSIKDCLSTCEQPKNTE
Sbjct: 721 NSIENYLNKDNEGFKCKKSDQLKNEQDKQEDPTNEKSQNYSQRRSIKDCLSTCEQPKNTE 780
Query: 781 VLRTTLKHSNVWRKHNFHSLDGTSTRAFHPQTGLPLLSSPVPQRKTQSGCFDLDSSLLHL 840
VLRTTLKHSNVWRKHNFHSLDGTSTRAFHPQTGLPLLSSPVPQRKTQSGCFDLDSSLLHL
Sbjct: 781 VLRTTLKHSNVWRKHNFHSLDGTSTRAFHPQTGLPLLSSPVPQRKTQSGCFDLDSSLLHL 840
Query: 841 KSFSSRSPRPCLNIEDDPDIHEKPFLSSSAPPITSLSLLGNFEESVLNYRFDPLGIVDGF 900
KSFSSRSPRPCLNIEDDPDIHEKPFLSSSAPPITSLSLLGNFEESVLNYRFDPLGIVDGF
Sbjct: 841 KSFSSRSPRPCLNIEDDPDIHEKPFLSSSAPPITSLSLLGNFEESVLNYRFDPLGIVDGF 900
Query: 901 TAEVGASGAFCPTHLTLPVEVSFYSVSDDNAPSPYMGVITLESLGKRGYRVPPSGTIQVT 960
TAEVGASGAFCPTHLTLPVEVSFYSVSDDNAPSPYMGVITLESLGKRGYRVPPSGTIQVT
Sbjct: 901 TAEVGASGAFCPTHLTLPVEVSFYSVSDDNAPSPYMGVITLESLGKRGYRVPPSGTIQVT 960
Query: 961 LFNPNKTVVKMFVVIYDLRDMPANHQTFLRQRTFSVPVKQEVKRSVNKENIRHTEERLLR 1020
LFNPNKTVVKMFVVIYDLRDMPANHQTFLRQRTFSVPVKQEVKRSVNKENIRHTEERLLR
Sbjct: 961 LFNPNKTVVKMFVVIYDLRDMPANHQTFLRQRTFSVPVKQEVKRSVNKENIRHTEERLLR 1020
Query: 1021 YLIHLRFQSSKSGKIYLHRDVRLLFSRKSMEVDSGAAYELKSYTESPTNPQFSPRC 1076
YLIHLRFQSSKSGKIYLHRDVRLLFSRKSMEVDSGAAYELKSYTESPTNPQFSPRC
Sbjct: 1021 YLIHLRFQSSKSGKIYLHRDVRLLFSRKSMEVDSGAAYELKSYTESPTNPQFSPRC 1076
>gi|33636717 hypothetical protein LOC80256 [Homo sapiens]
Length = 538
Score = 250 bits (639), Expect = 4e-66
Identities = 122/225 (54%), Positives = 163/225 (72%), Gaps = 8/225 (3%)
Query: 850 PCLNIEDDPDIHEKPFLSSSAPPITSLSLLGNFEESVLNYRFDPLGIVDGFTAEVGASGA 909
P ++ P + P S P S +LLGNFEES+L RF P G ++GFTAE+GASG+
Sbjct: 320 PLRSLRKGPGLLSPPSASPVPTPAVSRTLLGNFEESLLRGRFAPSGHIEGFTAEIGASGS 379
Query: 910 FCPTHLTLPVEVSFYSVSDDNAPSPYMGVITLESLGKRGYRVPPSGTIQVTLFNPNKTVV 969
+CP H+TLPV V+F+ VS+ NAP+P++G++ L LG++GY VP GT+QVTLFNPN+TVV
Sbjct: 380 YCPQHVTLPVTVTFFDVSEQNAPAPFLGIVDLNPLGRKGYSVPKVGTVQVTLFNPNQTVV 439
Query: 970 KMFVVIYDLRDMPANHQTFLRQRTFSVPVKQEVKRSVNKENIRHTEERLLRYLIHLRFQS 1029
KMF+V +D DMPA H TFLR R F VPV +E N H RLL YL+HLRF+S
Sbjct: 440 KMFLVTFDFSDMPAAHMTFLRHRLFLVPVGEE-----GNANPTH---RLLCYLLHLRFRS 491
Query: 1030 SKSGKIYLHRDVRLLFSRKSMEVDSGAAYELKSYTESPTNPQFSP 1074
S+SG++ LH D+RLLFSR+S+E+D+G YEL++ TE+P NP++SP
Sbjct: 492 SRSGRLSLHGDIRLLFSRRSLELDTGLPYELQAVTEAPHNPRYSP 536
>gi|62243484 sarcoma antigen NY-SAR-41 [Homo sapiens]
Length = 1417
Score = 52.8 bits (125), Expect = 2e-06
Identities = 88/470 (18%), Positives = 184/470 (39%), Gaps = 67/470 (14%)
Query: 367 IQERQEIIARIAQHLIHCDPSTSHVSGR-PFNTQESSSLHSKLFRVSQENENVGKGKEAF 425
+Q +EI+ R +L +C+ + R E L KL ++ +EN N GK K
Sbjct: 384 VQAEEEILER---NLTNCEKENKRLQERCGLYKSELEILKEKLRQLKEENNN-GKEKLRI 439
Query: 426 SMTFGSPEFSSPEDTNEGKIRLKPETPRSETCISNDFYSHMPVGETNPLIGSLLQERQDV 485
S + ++ + ++L+ E + + + F SL+ E +++
Sbjct: 440 MAVKNSEVMAQLTESRQSILKLESELENKDEILRDKF--------------SLMNENREL 485
Query: 486 IARIAQHLEHIDPTASHIPRQSFNMHDSSSVASKV--FRSSYEDKNLLKK-------NKD 536
R+A E +D I + + S++ R + K+ L K NK+
Sbjct: 486 KVRVAAQNERLDLCQQEIESSRVELRSLEKIISQLPLKRELFGFKSYLSKYQMSSFSNKE 545
Query: 537 ESSVSISHTKCSLLGD------ISDGK------NLVPNKCFTSFK--NNSKEKCSLKHQT 582
+ + ++ + I + + NL N+ S N+S+E L
Sbjct: 546 DRCIGCCEANKLVISELRIKLAIKEAEIQKLHANLTANQLSQSLITCNDSQESSKLSSLE 605
Query: 583 RNQCQ---NNPSEIIQSTYQETQNKSSSLSTSSILSQHKENNLDLTSRFKEQEMSNGIDK 639
+ + +E ++ Q T NK +++ +E L ++ + E N K
Sbjct: 606 TEPVKLGGHQVAESVKDQNQHTMNKQYEKERQRLVTGIEE----LRTKLIQIEAENSDLK 661
Query: 640 QYSNCTTIDKQICTNKYKEKIINENYNPKFFGNLQSDDSKKNDSKIKVTVLEMSEYLNKY 699
T Q+ + EK N + L+S+ +KK S++ ++ E + Y
Sbjct: 662 VNMAHRTSQFQLIQEELLEKASNSS-------KLESEMTKKC-SQLLTLEKQLEEKIVAY 713
Query: 700 ESMSSNKDSKRPKTCEQNTQLNSIENYLNKDNEG--FKCKKSDQLKNEQDKQEDPTNEKS 757
S+++ + E+N ++ S+E +N ++E +K+ ++ EQ K+ + E+
Sbjct: 714 SSIAAKNAELEQELMEKNEKIRSLETNINTEHEKICLAFEKAKKIHLEQHKEMEKQIERL 773
Query: 758 QNYSQRRSIKDCLSTCEQPKNTEVLRTTLKHSNVWRKHNFHSLDGTSTRA 807
+ +++ +Q K E + L+ + ++H+ SLD T +
Sbjct: 774 EAQLEKKD--------QQFKEQEKTMSMLQQDIICKQHHLESLDRLLTES 815
>gi|34878904 synaptonemal complex protein 1 [Homo sapiens]
Length = 976
Score = 52.4 bits (124), Expect = 2e-06
Identities = 54/219 (24%), Positives = 98/219 (44%), Gaps = 26/219 (11%)
Query: 576 CSLKHQTRNQCQN--NPSEIIQSTYQETQNKSSSLSTSSILSQHKENNLDLTSRFKEQEM 633
CSL+ R + Q + ++ E Q KSS L + L+ +KE L+ + ++
Sbjct: 385 CSLEELLRTEQQRLEKNEDQLKILTMELQKKSSELEEMTKLTNNKEVELEELKKVLGEK- 443
Query: 634 SNGIDKQYSNCTTIDKQICTNKYKEKIINE--NYNPKFFGNLQSDDSKKNDSKIKVTVLE 691
+ + NK EKI E + G LQ+ + + +D +I++T +
Sbjct: 444 --------------ETLLYENKQFEKIAEELKGTEQELIGLLQAREKEVHDLEIQLTAIT 489
Query: 692 MSE--YLNKYESMSSNKDSKRPKTCEQNTQLNSIENYLNKDNEGFKCKKSDQLKNEQDKQ 749
SE Y + + + + ++++ K NT+L S N L+ +N+ + SD +++Q
Sbjct: 490 TSEQYYSKEVKDLKTELENEKLK----NTELTSHCNKLSLENKELTQETSDMTLELKNQQ 545
Query: 750 EDPTNEKSQNYSQRRSIKDCLSTCEQPKN-TEVLRTTLK 787
ED N K Q + I++ T Q +N E +R LK
Sbjct: 546 EDINNNKKQEERMLKQIENLQETETQLRNELEYVREELK 584
Score = 36.6 bits (83), Expect = 0.13
Identities = 40/183 (21%), Positives = 71/183 (38%), Gaps = 12/183 (6%)
Query: 562 NKCFTSFKNNSKEKCSLKHQTRNQCQNNPSEIIQSTYQETQNKSSSLSTSSILSQHKENN 621
NK K ++E + + +NQ E I + ++ + + N
Sbjct: 521 NKLSLENKELTQETSDMTLELKNQ-----QEDINNNKKQEERMLKQIENLQETETQLRNE 575
Query: 622 LDLTS---RFKEQEMSNGIDKQYSNCTTIDKQICT-NKYKEKIINENYNPKFFGNLQSDD 677
L+ + K E+ +DK NC + KQ+ NKY E++ EN K G +S
Sbjct: 576 LEYVREELKQKRDEVKCKLDKSEENCNNLRKQVENKNKYIEELQQENKALKKKGTAESKQ 635
Query: 678 SKKNDSKIKVTVLEMSEYLNKYESMSS--NKDSKRPKTCEQNTQLNSIENYLNKDNEGFK 735
+ K+ LE+ K+ ++ K+ + K E+N L +E +E K
Sbjct: 636 LNVYEIKVNKLELELESAKQKFGEITDTYQKEIEDKKISEENL-LEEVEKAKVIADEAVK 694
Query: 736 CKK 738
+K
Sbjct: 695 LQK 697
>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
Length = 2230
Score = 46.6 bits (109), Expect = 1e-04
Identities = 78/398 (19%), Positives = 155/398 (38%), Gaps = 26/398 (6%)
Query: 402 SSLHSKLFRVSQENENVGKGKEAFSMTFGSPEFSSPEDTNEGKIRLKPETPRSETCISND 461
S L SKL +E +++ E + + + + E I+L ++E +
Sbjct: 1172 SELTSKLKTTDEEFQSLKSSHEKSNKSLEDKSLEFKKLSEELAIQLDICCKKTEALLE-- 1229
Query: 462 FYSHMPVGETNPLIGSLLQERQDVIARIAQHLEHIDPTASHIPRQSFNMHDSSSVASKVF 521
+TN LI + +++RI+ H +H + + + S
Sbjct: 1230 -------AKTNELINISSSKTNAILSRIS-HCQH---RTTKVKEALLIKTCTVSELEAQL 1278
Query: 522 RSSYEDKNLLKKNKDESSVSISHTKCSLLGDISDGKNLVPNK-CFTSFKNNSKEKCSLKH 580
R E++N L + +++ + + + +D ++LV K N ++ S K
Sbjct: 1279 RQLTEEQNTLNISFQQATHQLEEKENQIKSMKADIESLVTEKEALQKEGGNQQQAASEKE 1338
Query: 581 QTRNQCQNNPSEIIQS-TYQETQNKSSSLSTSSILSQHKENNLDLTSRFKEQEMSNGID- 638
Q + SE I + T + + K + SS+ Q + N+ L + E I
Sbjct: 1339 SCITQLKKELSENINAVTLMKEELKEKKVEISSLSKQLTDLNVQLQNSISLSEKEAAISS 1398
Query: 639 --KQYSN--CTTIDKQICTNKYKEKIINENYNPKFFGNLQSDD-SKKNDSKIKVTVLEMS 693
KQY C +D Q+ +K +++ K Q DD S K K +
Sbjct: 1399 LRKQYDEEKCELLD-QVQDLSFKVDTLSKE---KISALEQVDDWSNKFSEWKKKAQSRFT 1454
Query: 694 EYLNKYESMSSNKDSKRPKTCEQNTQLNSIENYLNKDNEGFKCKKSDQLKNEQDKQEDPT 753
++ N + + + K + E++ Q+N ++ L++ N+ F C K + ++ ++ +
Sbjct: 1455 QHQNTVKELQIQLELKSKEAYEKDEQINLLKEELDQQNKRFDCLKGEMEDDKSKMEKKES 1514
Query: 754 NEKSQNYSQRRSIKDCLSTCEQPK-NTEVLRTTLKHSN 790
N +++ SQ I + Q E L LK+ N
Sbjct: 1515 NLETELKSQTARIMELEDHITQKTIEIESLNEVLKNYN 1552
Score = 35.4 bits (80), Expect = 0.29
Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 9/162 (5%)
Query: 569 KNNSKEKCSLKHQTRNQCQNNPSEIIQSTYQETQNKSSSLSTSSILSQHKENNLDLTSRF 628
K+NS K L + Q E+ + T +ET NK+ + + S +E N L
Sbjct: 1989 KHNSTLK-QLMREFNTQLAQKEQEL-EMTIKETINKAQEVEAELLESHQEETNQLLKKIA 2046
Query: 629 KEQEMSNGIDKQYSNCTTIDKQICTNKYKE-KIINENYNPKFFGNLQSDDSKKNDSKIKV 687
++ + K+Y ++ T K ++ + E K+ L+ +++ ND+ V
Sbjct: 2047 EKDDDLKRTAKRYEEILDAREEEMTAKVRDLQTQLEELQKKYQQKLEQEENPGNDN---V 2103
Query: 688 TVLEMSEYLNKYESMSSNKDSKRPKTCEQNTQLNSIENYLNK 729
T++E+ L + ++ S DSK K E Q++++E+ L K
Sbjct: 2104 TIMELQTQLAQKTTLIS--DSKL-KEQEFREQIHNLEDRLKK 2142
>gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]
Length = 1301
Score = 45.4 bits (106), Expect = 3e-04
Identities = 71/401 (17%), Positives = 150/401 (37%), Gaps = 8/401 (1%)
Query: 385 DPSTSHVSGRPFNTQESSSLHSKLFRVSQENENVGKGKEAFSMTFGSPEFSSPEDTNEGK 444
D S S+ S N+ S S +S S ++ + + + S S + +N +
Sbjct: 641 DSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNSSDSSDSSDSSNSSE 700
Query: 445 IRLKPETPRSETCISNDFY-SHMPVGETNPLIGSLLQERQDVIARIAQHLEHIDPTASHI 503
++ S++ S+D S+ +++ S + + D + S
Sbjct: 701 SSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDSSDSSNSSDSSDSSD 760
Query: 504 PRQSFNMHDSSSVASKVFRSSYEDKNLLKKNKDESSVSISHTKCSLLGDISDGKNLVPNK 563
S + DSS + S+ D N N +SS S + + S D SD + +
Sbjct: 761 SSNSSDSSDSSDSSDSSDSSNSSDSND-SSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSD 819
Query: 564 CFTSFKNNSKEKCSLKHQTRNQCQNNPSEIIQSTYQETQNKS-SSLSTSSILSQHKENNL 622
+S ++S + + ++ S+ + ++ N+S SS S+ S S N+
Sbjct: 820 --SSNSSDSSNSSDSSDSSNSSDSSDSSDSSDGSDSDSSNRSDSSNSSDSSDSSDSSNSS 877
Query: 623 DLTSRFKEQEMSNGIDKQYSNCTTIDKQICTNKYKEKIINENYNPKFFGNLQSDDSKKND 682
D + E SN D S+ ++ ++ + + N + + SD+S +D
Sbjct: 878 DSSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNSSD 937
Query: 683 SKIKVTVLEMSEYLNKYESMSSNKDSKRPKTCEQNTQLNSIENY---LNKDNEGFKCKKS 739
S + S+ N +S +S+ S + + N+ +S + + ++ S
Sbjct: 938 SSNSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSNSSDSSDSSNSSDSSDSSDSSDSSDS 997
Query: 740 DQLKNEQDKQEDPTNEKSQNYSQRRSIKDCLSTCEQPKNTE 780
N D + + S N S + D ++ + +++
Sbjct: 998 SDSSNSSDSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSSD 1038
Score = 38.5 bits (88), Expect = 0.034
Identities = 49/255 (19%), Positives = 89/255 (34%), Gaps = 8/255 (3%)
Query: 512 DSSSVASKVFRSSYEDKNLLKKNKDESSVSISHTKCSLLGDISDGKNLVPNKCFTSFKNN 571
DSS ++ S D + + D S +K SD K+ + + +N
Sbjct: 594 DSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDN 653
Query: 572 SKEKCSLKHQTRNQCQNNPSEIIQSTYQETQNKSSS-----LSTSSILSQHKENNLDLTS 626
S S + ++ S+ ++ N S S S SS S +++ +S
Sbjct: 654 SDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDSS 713
Query: 627 RFKEQEMSNGIDKQYSNCTTIDKQICTNKYKEKIINENYNPKFFGNLQSDDSKKNDSKIK 686
+ SN D SN + D +N +++ N + SD S +DS
Sbjct: 714 DSSDSSNSNSSDSDSSNSS--DSSDSSNSSDSSDSSDSSNSSDSSD-SSDSSNSSDSSDS 770
Query: 687 VTVLEMSEYLNKYESMSSNKDSKRPKTCEQNTQLNSIENYLNKDNEGFKCKKSDQLKNEQ 746
+ S+ N +S S+ S + + NS ++ + D+ S N
Sbjct: 771 SDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSS 830
Query: 747 DKQEDPTNEKSQNYS 761
D + + S + S
Sbjct: 831 DSSDSSNSSDSSDSS 845
Score = 33.1 bits (74), Expect = 1.4
Identities = 71/385 (18%), Positives = 141/385 (36%), Gaps = 12/385 (3%)
Query: 385 DPSTSHVSGRPFNTQESS-SLHSKLFRVSQENENVGKGKEAFSMTFGSPEFSSPEDTNEG 443
D S S S N+ +SS S +S S ++ N ++ + S +S + +N
Sbjct: 907 DSSNSSDSSDSSNSSDSSESSNSSDNSNSSDSSNSSDSSDSSDSSNSSDSSNSSDSSNSS 966
Query: 444 KIRLKPETPRSETCISNDFYSHMPVGETNPLIGSLLQERQDVIARIAQHLEHIDPTASHI 503
+ S++ S+D +++ S + + D + S
Sbjct: 967 DSSDSNSSDSSDSSNSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSNSSDSSNSSD 1026
Query: 504 PRQSFNMHDSSSVASKVFRSSYEDKNLLKKNKDESSVSISHTKCSLLGDISDGKNLVPNK 563
S + DSS + S D + N +SS S + S D SD + +
Sbjct: 1027 SSNSSDSSDSSDSSDSSDSSDSSDSSD-SSNSSDSSDSSDSSDSSDSSDSSDSSDSSESS 1085
Query: 564 CFTSFKNNSKEKCSLKHQTRNQCQNNPSEIIQSTYQETQNKSSSLSTSSILSQHKENNLD 623
+S +NS + + + ++ S+ S+ + SS S SS S N+ D
Sbjct: 1086 D-SSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSD-SSDSSNSSD 1143
Query: 624 LTSRFKEQEMSNGIDKQYSNCTT-----IDKQICTNKYKEKIINENYNPKFFGNLQ--SD 676
+ + + S+ D S+ ++ D +N +++ + + SD
Sbjct: 1144 SSDSSESSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSD 1203
Query: 677 DSKKNDSKIKVTVLEMSEYLNKYESMSSNKDSKRPKTCEQNTQLNSIENYLNKDNEGFKC 736
S +DS + S+ + +S SN+ S + + + NS ++ + D+
Sbjct: 1204 SSDSSDSSDSSDSSDSSDSSDSSDSSDSNESSDSSDSSDSSDSSNSSDSSDSSDSSDSTS 1263
Query: 737 KKSDQLKNEQDKQEDPTNEKSQNYS 761
+D+ + Q K + N S + S
Sbjct: 1264 DSNDE-SDSQSKSGNGNNNGSDSDS 1287
>gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1
[Homo sapiens]
Length = 651
Score = 43.1 bits (100), Expect = 0.001
Identities = 51/250 (20%), Positives = 107/250 (42%), Gaps = 26/250 (10%)
Query: 554 SDGKNLVPNKCFTSFKNNSKEKCSLKHQ--TRNQCQNNPSEIIQSTYQETQN--KSSSLS 609
SD +++ + ++ N+ + SLK+ T+ + N + + +++++ K S
Sbjct: 254 SDDESINFDAWLRNYSQNNSKNYSLKYTKYTKKDTKKNAKKSSDAESEDSKDAKKDSKKV 313
Query: 610 TSSILSQHKENNLDLTSRFKEQEMSNGID------KQYSNCTTIDKQICTNKYKEKIINE 663
++ K+ ++ + + E + D K DK+ T KY E E
Sbjct: 314 KKNVKKDDKKKDVKKDTESTDAESGDSKDERKDTKKDKKKLKKDDKKKDTKKYPESTDTE 373
Query: 664 NYNPKFFGN-------LQSDDSKKNDSKIKVTVLEMSEYLNKYESMSSNKDSKRPKTCEQ 716
+ + K N +D KK D+K K+T SE ++ ES S KD K+ K +
Sbjct: 374 SGDAKDARNDSRNLKKASKNDDKKKDAK-KITFSTDSE--SELESKESQKDEKKDKKDSK 430
Query: 717 NTQLNSIEN---YLNKDNE---GFKCKKSDQLKNEQDKQEDPTNEKSQNYSQRRSIKDCL 770
S++N + D+E K K D+ K ++D ++D + ++ ++ ++ L
Sbjct: 431 TDNKKSVKNDEESTDADSEPKGDSKKGKKDEKKGKKDSKKDDKKKDAKKNAESTEMESDL 490
Query: 771 STCEQPKNTE 780
+ K+++
Sbjct: 491 ELKKDKKHSK 500
Score = 33.1 bits (74), Expect = 1.4
Identities = 61/290 (21%), Positives = 102/290 (35%), Gaps = 35/290 (12%)
Query: 509 NMHDSSSVASKVFRSSYEDKNLLKKNKDESSVSISHTKCSLLGDISDGKNLVPNKCFTSF 568
N V K R + DK LK + + S + + + K + N S
Sbjct: 141 NPESKQIVEEKTKRQNEADKTPLKSSHENEQSKKSKSSSETNPESQNSKTVSKN---CSQ 197
Query: 569 KNNSKEKCSLKHQTRN-QCQNNPSEIIQSTYQETQNKSSSLSTSSI---------LSQHK 618
K+ K S K T +NNP + ++ + S S +S+ S +
Sbjct: 198 KDKKDSKNSKKTNTEFLHTKNNPKKDLKRSKTSNDPISEICSENSLNVDFLMLVGQSDDE 257
Query: 619 ENNLDLTSRFKEQEMSNGIDKQYSNCTTIDKQICTNKYKEKIINENYNPKFFG-----NL 673
N D R Q S +Y+ T D + K + ++ + K N+
Sbjct: 258 SINFDAWLRNYSQNNSKNYSLKYTKYTKKDTKKNAKKSSDAESEDSKDAKKDSKKVKKNV 317
Query: 674 QSDDSKKNDSK-IKVTVLEMSEYLNKYESMSSNKDSKRPKTCEQ-----------NTQLN 721
+ DD KK+ K + T E + +K E + KD K+ K ++ +T+
Sbjct: 318 KKDDKKKDVKKDTESTDAESGD--SKDERKDTKKDKKKLKKDDKKKDTKKYPESTDTESG 375
Query: 722 SIENYLNKDNEGFKCKKSDQLKNEQDK---QEDPTNEKSQNYSQRRSIKD 768
++ N K K+D K + K D +E SQ+ KD
Sbjct: 376 DAKDARNDSRNLKKASKNDDKKKDAKKITFSTDSESELESKESQKDEKKD 425
>gi|38045898 RAB6-interacting protein 2 isoform epsilon [Homo
sapiens]
Length = 1116
Score = 40.4 bits (93), Expect = 0.009
Identities = 41/173 (23%), Positives = 72/173 (41%), Gaps = 10/173 (5%)
Query: 601 TQNKSSSLSTSSILSQHKENNLDLTSRFKEQEMSNGIDKQYSNCTTIDKQICTNKYKEKI 660
++ ++S L S + L SR K E++ ++++ C ++ Q+ K E
Sbjct: 669 SEKEASLLDLKEHASSLASSGLKKDSRLKTLEIA--LEQKKEECLKMESQL--KKAHEAA 724
Query: 661 INENYNPKFFGNLQSDDS-----KKNDSKIKVTVLEMSEYLNKYESMSSNKDSKRPKTCE 715
+ +P+ +Q + K SK + V + E L + E+ ++KD K +
Sbjct: 725 LEARASPEMSDRIQHLEREITRYKDESSKAQAEVDRLLEILKEVENEKNDKDKKIAELER 784
Query: 716 QNTQLNSIENYLNKDNEGFKCKKSDQLKNEQDKQEDPTNEKSQNYSQRRSIKD 768
Q N L K E + KKS Q+ E ++ED N+ SQ KD
Sbjct: 785 QVKDQNKKVANL-KHKEQVEKKKSAQMLEEARRREDNLNDSSQQLQDSLRKKD 836
>gi|38045896 RAB6-interacting protein 2 isoform delta [Homo sapiens]
Length = 1088
Score = 40.4 bits (93), Expect = 0.009
Identities = 41/173 (23%), Positives = 72/173 (41%), Gaps = 10/173 (5%)
Query: 601 TQNKSSSLSTSSILSQHKENNLDLTSRFKEQEMSNGIDKQYSNCTTIDKQICTNKYKEKI 660
++ ++S L S + L SR K E++ ++++ C ++ Q+ K E
Sbjct: 641 SEKEASLLDLKEHASSLASSGLKKDSRLKTLEIA--LEQKKEECLKMESQL--KKAHEAA 696
Query: 661 INENYNPKFFGNLQSDDS-----KKNDSKIKVTVLEMSEYLNKYESMSSNKDSKRPKTCE 715
+ +P+ +Q + K SK + V + E L + E+ ++KD K +
Sbjct: 697 LEARASPEMSDRIQHLEREITRYKDESSKAQAEVDRLLEILKEVENEKNDKDKKIAELER 756
Query: 716 QNTQLNSIENYLNKDNEGFKCKKSDQLKNEQDKQEDPTNEKSQNYSQRRSIKD 768
Q N L K E + KKS Q+ E ++ED N+ SQ KD
Sbjct: 757 QVKDQNKKVANL-KHKEQVEKKKSAQMLEEARRREDNLNDSSQQLQDSLRKKD 808
>gi|41152076 steroid-sensitive protein 1 [Homo sapiens]
Length = 950
Score = 40.0 bits (92), Expect = 0.012
Identities = 32/144 (22%), Positives = 65/144 (45%), Gaps = 7/144 (4%)
Query: 655 KYKEKIINENYNPKFFGNLQSDDSKKNDSKIKVTVLEMSEYLNKYESMSSNKDSKRPKTC 714
K ++KI++ Y K+ + + +++ ++ L+ ++ K+E + + K+ K
Sbjct: 496 KAQDKILSNEYEEKYDLSRPTASQLEDELQVGNVPLKKAKESKKHEKLEKPEKEKKKKMK 555
Query: 715 EQNT-QLNSIENYLNKDN-----EGFKCKKSDQLKNEQDKQEDPTNEKSQNYSQRRSIKD 768
+N +L E + K E K KK K EQD + PTN K S ++S+ D
Sbjct: 556 NENADKLLKSEKQMKKSEKKSKQEKEKSKKKKGGKTEQDGYQKPTN-KHFTQSPKKSVAD 614
Query: 769 CLSTCEQPKNTEVLRTTLKHSNVW 792
L + E + ++ +N++
Sbjct: 615 LLGSFEGKRRLLLITAPKAENNMY 638
>gi|41152074 steroid-sensitive protein 1 [Homo sapiens]
Length = 950
Score = 40.0 bits (92), Expect = 0.012
Identities = 32/144 (22%), Positives = 65/144 (45%), Gaps = 7/144 (4%)
Query: 655 KYKEKIINENYNPKFFGNLQSDDSKKNDSKIKVTVLEMSEYLNKYESMSSNKDSKRPKTC 714
K ++KI++ Y K+ + + +++ ++ L+ ++ K+E + + K+ K
Sbjct: 496 KAQDKILSNEYEEKYDLSRPTASQLEDELQVGNVPLKKAKESKKHEKLEKPEKEKKKKMK 555
Query: 715 EQNT-QLNSIENYLNKDN-----EGFKCKKSDQLKNEQDKQEDPTNEKSQNYSQRRSIKD 768
+N +L E + K E K KK K EQD + PTN K S ++S+ D
Sbjct: 556 NENADKLLKSEKQMKKSEKKSKQEKEKSKKKKGGKTEQDGYQKPTN-KHFTQSPKKSVAD 614
Query: 769 CLSTCEQPKNTEVLRTTLKHSNVW 792
L + E + ++ +N++
Sbjct: 615 LLGSFEGKRRLLLITAPKAENNMY 638
>gi|116174736 sentrin/SUMO-specific protease 7 isoform 2 [Homo
sapiens]
Length = 985
Score = 39.7 bits (91), Expect = 0.015
Identities = 70/321 (21%), Positives = 125/321 (38%), Gaps = 62/321 (19%)
Query: 503 IPRQSFNMHDSSSVASKVFRS----SYEDKNLLKKNKDESSVSISHTKCSLLGDISDGKN 558
+PR N+ D++ V S S S E L+ + ++S ++ S D + K
Sbjct: 117 LPRNDANLCDANKVQSDSLPSTSVDSLETCQKLEPLRQSLNLSERGSQRSKTVDDNSAKQ 176
Query: 559 LVPNKCFTSFKNNSKEKCSLK-HQTRNQCQNNPSEIIQSTYQETQNKSSSLSTSSILSQH 617
NK K + SL T+ + N+ S QE++NK S S +
Sbjct: 177 TAHNK----EKRRKDDGISLLISDTQPEDLNSGSRGCDHLEQESRNKDVKYSDSKV---- 228
Query: 618 KENNLDLTSRFKEQEMSNGI-DKQYSNCTTIDKQICTNKYKE---------KIINENYN- 666
L L SR ++ + N + D QY CT++DK K +E + +ENY+
Sbjct: 229 ---ELTLISRKTKRRLRNNLPDSQY--CTSLDKSTEQTKKQEDDSTISTEFEKPSENYHQ 283
Query: 667 -PKFFGNLQSDDSKKNDSKIKVTVLEMSEYLNKYESMSSNKDSKRPKTC----------- 714
PK + + +K + +K+ + N +S S+ ++ +
Sbjct: 284 DPKLPEEITTKPTKSDFTKLSSLNSQELTLSNATKSASAGSTTETVENSNSIDIVGISSL 343
Query: 715 --EQNTQLNSIEN-------------------YLNKDNEGFKCKKSDQLKNEQDKQEDPT 753
+ +LN+IE ++ D EG KS ++ Q KQ+ T
Sbjct: 344 VEKDENELNTIEKPILRGHNEGNQSLISAEPIVVSSDEEGPVEHKSSEILKLQSKQDRET 403
Query: 754 NEKSQNYSQRRSIKDCLSTCE 774
++++ S+ ++ L TCE
Sbjct: 404 TNENESTSESALLELPLITCE 424
>gi|134948605 ankyrin repeat domain 12 isoform 2 [Homo sapiens]
Length = 2039
Score = 38.9 bits (89), Expect = 0.026
Identities = 64/289 (22%), Positives = 112/289 (38%), Gaps = 32/289 (11%)
Query: 492 HLEHIDPTASHIPRQSFNMHDSSSVASKVFRSSYEDKNLLKKNKDESSVSISHTKCSLLG 551
++EH T + N+ D S K K K K ES S K +
Sbjct: 689 NMEHESLTLEKKSKLEKNIKDDKSTKEKHVSKERNFKEERDKIKKESEKSFREEK---IK 745
Query: 552 DISDGKNLVP---NKCFTSFKNNSKEKCSLKHQTRNQCQNNPSEIIQSTYQETQNKSSSL 608
D+ + + +P + FTS ++ E+ H + I QE K S
Sbjct: 746 DLKEERENIPTDKDSEFTSLGMSAIEESIGLHLVEKE--------IDIEKQEKHIKESKE 797
Query: 609 STSSILSQHKENNLDLTSRFKEQEMSNGIDKQYSNCTTIDKQICTNKYKEKIINENYNPK 668
SQ KE +++ R ++ + S +D C +K KEK ++ Y+
Sbjct: 798 KPEK-RSQIKEKDIEKMERKTFEKEKKIKHEHKSEKDKLDLSECVDKIKEK--DKLYSHH 854
Query: 669 FFGNLQSDDSKKNDSKIKVTVLEMSEYLNKYESMSSNKDSKRPKTCEQNTQLNSIENYL- 727
+ + KN + IK T + E M D ++P+ ++ S E +L
Sbjct: 855 TEKCHKEGEKSKNTAAIKKT----DDREKSREKMDRKHDKEKPE--KERHLAESKEKHLM 908
Query: 728 ---NKDNEGFKCKKSDQLKN-----EQDKQEDPTNEKSQNYSQRRSIKD 768
NK ++ + KS++ KN E DK+E +++S N + + I++
Sbjct: 909 EKKNKQSDNSEYSKSEKGKNKEKDRELDKKEKSRDKESINITNSKHIQE 957
Score = 37.4 bits (85), Expect = 0.077
Identities = 57/273 (20%), Positives = 113/273 (41%), Gaps = 21/273 (7%)
Query: 511 HDSSSVASKVFRSSYEDKNLLKKNKDESSVSISHTKCSLLGDISDGKNLVPNKCFTSFKN 570
H S K F + +K+ K ++ S + ++ C+L +GK L +K +
Sbjct: 579 HKEKSKHQKDFHLEFGEKSNAKIKDEDHSPTFENSDCTLKKMDKEGKTLKKHKLKHKERE 638
Query: 571 NSKEKCSL-----KHQTRNQCQ--NNPSEIIQSTYQETQNKSSSLSTSSILSQHKENNLD 623
K K + K++T++ + E + ++E KS + +H+ L+
Sbjct: 639 KEKHKKEIEGEKEKYKTKDSAKELQRSVEFDREFWKENFFKSDETEDLFLNMEHESLTLE 698
Query: 624 LTSRFKEQEMSNGIDKQYSNCTTIDKQICTNKYKEKIINENYNPKFFGNLQSDDSKKNDS 683
S+ ++ N D + + + K+ + ++KI E + K F + D K+
Sbjct: 699 KKSKLEK----NIKDDKSTKEKHVSKERNFKEERDKIKKE--SEKSFREEKIKDLKEERE 752
Query: 684 KIKVTVLEMSEYLNKYESMSSNKDSKRPKTCEQNTQLNSIENYLNKDNEGFKCKKSDQLK 743
I + SE+ + MS+ ++S E+ + E ++ + E K +K Q+K
Sbjct: 753 NIPTD--KDSEFTSL--GMSAIEESIGLHLVEKEIDIEKQEKHIKESKE--KPEKRSQIK 806
Query: 744 NEQ-DKQEDPTNEKSQNYS-QRRSIKDCLSTCE 774
+ +K E T EK + + +S KD L E
Sbjct: 807 EKDIEKMERKTFEKEKKIKHEHKSEKDKLDLSE 839
Score = 33.1 bits (74), Expect = 1.4
Identities = 49/247 (19%), Positives = 90/247 (36%), Gaps = 50/247 (20%)
Query: 589 NPSEIIQSTYQETQNKSSSLSTSSILSQHKENNLDLTSRFKEQEMSNGIDKQYSNCTTID 648
NPS + ++ ET+ S + IL + L S E E + D++ +
Sbjct: 300 NPSSVDENIDSETEKDSLICESKQILP----SKTPLPSALDEYEFKDDDDEEIN------ 349
Query: 649 KQICTNKYKEKIINENYNPKFFGNLQSDDSKKNDSKIKVTVLEMSEYLNKYESMSSNKDS 708
K+I++ + L+ + K+N+ + + T L + Y +K
Sbjct: 350 ----------KMIDDRHI------LRKEQRKENEPEAEKTHLFAKQEKAFYPKSFKSKKQ 393
Query: 709 KRPKTCEQNTQLNSIENYLNK------------DNEGFKCKKSDQLKNEQDKQEDPTNEK 756
K + +T+ + E NK N + KK + E KQ+ K
Sbjct: 394 KPSRVLYSSTESSDEEALQNKKISTSCSVIPETSNSDMQTKKEYVVSGEH-KQKGKVKRK 452
Query: 757 SQNYSQRRSIKDCLSTCEQPKNTEVLRTTL----------KHSNVWRKHNFHSLDGTSTR 806
+N ++ + ++ E +NT + T+ + +RK +F D TS
Sbjct: 453 LKNQNKNKENQELKQEKEGKENTRITNLTVNTGLDCSEKTREEGNFRK-SFSPKDDTSLH 511
Query: 807 AFHPQTG 813
FH TG
Sbjct: 512 LFHISTG 518
>gi|134948558 ankyrin repeat domain 12 isoform 1 [Homo sapiens]
Length = 2062
Score = 38.9 bits (89), Expect = 0.026
Identities = 64/289 (22%), Positives = 112/289 (38%), Gaps = 32/289 (11%)
Query: 492 HLEHIDPTASHIPRQSFNMHDSSSVASKVFRSSYEDKNLLKKNKDESSVSISHTKCSLLG 551
++EH T + N+ D S K K K K ES S K +
Sbjct: 712 NMEHESLTLEKKSKLEKNIKDDKSTKEKHVSKERNFKEERDKIKKESEKSFREEK---IK 768
Query: 552 DISDGKNLVP---NKCFTSFKNNSKEKCSLKHQTRNQCQNNPSEIIQSTYQETQNKSSSL 608
D+ + + +P + FTS ++ E+ H + I QE K S
Sbjct: 769 DLKEERENIPTDKDSEFTSLGMSAIEESIGLHLVEKE--------IDIEKQEKHIKESKE 820
Query: 609 STSSILSQHKENNLDLTSRFKEQEMSNGIDKQYSNCTTIDKQICTNKYKEKIINENYNPK 668
SQ KE +++ R ++ + S +D C +K KEK ++ Y+
Sbjct: 821 KPEK-RSQIKEKDIEKMERKTFEKEKKIKHEHKSEKDKLDLSECVDKIKEK--DKLYSHH 877
Query: 669 FFGNLQSDDSKKNDSKIKVTVLEMSEYLNKYESMSSNKDSKRPKTCEQNTQLNSIENYL- 727
+ + KN + IK T + E M D ++P+ ++ S E +L
Sbjct: 878 TEKCHKEGEKSKNTAAIKKT----DDREKSREKMDRKHDKEKPE--KERHLAESKEKHLM 931
Query: 728 ---NKDNEGFKCKKSDQLKN-----EQDKQEDPTNEKSQNYSQRRSIKD 768
NK ++ + KS++ KN E DK+E +++S N + + I++
Sbjct: 932 EKKNKQSDNSEYSKSEKGKNKEKDRELDKKEKSRDKESINITNSKHIQE 980
Score = 37.4 bits (85), Expect = 0.077
Identities = 57/273 (20%), Positives = 113/273 (41%), Gaps = 21/273 (7%)
Query: 511 HDSSSVASKVFRSSYEDKNLLKKNKDESSVSISHTKCSLLGDISDGKNLVPNKCFTSFKN 570
H S K F + +K+ K ++ S + ++ C+L +GK L +K +
Sbjct: 602 HKEKSKHQKDFHLEFGEKSNAKIKDEDHSPTFENSDCTLKKMDKEGKTLKKHKLKHKERE 661
Query: 571 NSKEKCSL-----KHQTRNQCQ--NNPSEIIQSTYQETQNKSSSLSTSSILSQHKENNLD 623
K K + K++T++ + E + ++E KS + +H+ L+
Sbjct: 662 KEKHKKEIEGEKEKYKTKDSAKELQRSVEFDREFWKENFFKSDETEDLFLNMEHESLTLE 721
Query: 624 LTSRFKEQEMSNGIDKQYSNCTTIDKQICTNKYKEKIINENYNPKFFGNLQSDDSKKNDS 683
S+ ++ N D + + + K+ + ++KI E + K F + D K+
Sbjct: 722 KKSKLEK----NIKDDKSTKEKHVSKERNFKEERDKIKKE--SEKSFREEKIKDLKEERE 775
Query: 684 KIKVTVLEMSEYLNKYESMSSNKDSKRPKTCEQNTQLNSIENYLNKDNEGFKCKKSDQLK 743
I + SE+ + MS+ ++S E+ + E ++ + E K +K Q+K
Sbjct: 776 NIPTD--KDSEFTSL--GMSAIEESIGLHLVEKEIDIEKQEKHIKESKE--KPEKRSQIK 829
Query: 744 NEQ-DKQEDPTNEKSQNYS-QRRSIKDCLSTCE 774
+ +K E T EK + + +S KD L E
Sbjct: 830 EKDIEKMERKTFEKEKKIKHEHKSEKDKLDLSE 862
Score = 33.1 bits (74), Expect = 1.4
Identities = 49/247 (19%), Positives = 90/247 (36%), Gaps = 50/247 (20%)
Query: 589 NPSEIIQSTYQETQNKSSSLSTSSILSQHKENNLDLTSRFKEQEMSNGIDKQYSNCTTID 648
NPS + ++ ET+ S + IL + L S E E + D++ +
Sbjct: 323 NPSSVDENIDSETEKDSLICESKQILP----SKTPLPSALDEYEFKDDDDEEIN------ 372
Query: 649 KQICTNKYKEKIINENYNPKFFGNLQSDDSKKNDSKIKVTVLEMSEYLNKYESMSSNKDS 708
K+I++ + L+ + K+N+ + + T L + Y +K
Sbjct: 373 ----------KMIDDRHI------LRKEQRKENEPEAEKTHLFAKQEKAFYPKSFKSKKQ 416
Query: 709 KRPKTCEQNTQLNSIENYLNK------------DNEGFKCKKSDQLKNEQDKQEDPTNEK 756
K + +T+ + E NK N + KK + E KQ+ K
Sbjct: 417 KPSRVLYSSTESSDEEALQNKKISTSCSVIPETSNSDMQTKKEYVVSGEH-KQKGKVKRK 475
Query: 757 SQNYSQRRSIKDCLSTCEQPKNTEVLRTTL----------KHSNVWRKHNFHSLDGTSTR 806
+N ++ + ++ E +NT + T+ + +RK +F D TS
Sbjct: 476 LKNQNKNKENQELKQEKEGKENTRITNLTVNTGLDCSEKTREEGNFRK-SFSPKDDTSLH 534
Query: 807 AFHPQTG 813
FH TG
Sbjct: 535 LFHISTG 541
>gi|20270337 Leo1, Paf1/RNA polymerase II complex component, homolog
[Homo sapiens]
Length = 666
Score = 38.5 bits (88), Expect = 0.034
Identities = 49/236 (20%), Positives = 87/236 (36%), Gaps = 32/236 (13%)
Query: 532 KKNKDESSVSISHTKCSLLGDISDGKNLVPNKCFTSFKNNSKEKCSLKHQTRNQCQNNPS 591
+ ++DE S + L GD S+ + + + S + ++ ++ N+PS
Sbjct: 44 ESDQDERGDSGQPSNKELFGDDSEDEGASHHSGSDNHSERSDNRSEASERSDHE-DNDPS 102
Query: 592 EIIQSTYQETQNKSSSLSTSSILSQHKENNLDLTSRFKEQEMSNGIDKQYSNCTTIDKQI 651
++ Q + E N H+ + S + E ++ D+++ D+
Sbjct: 103 DVDQHSGSEAPNDDED-------EGHRSDGGSHHSEAEGSEKAHSDDEKWGREDKSDQSD 155
Query: 652 CTNKYKEKIINENYNPKFFGNLQSDDSKKNDSKIKVTVLEMSEYLNKYESMSSNKDSKRP 711
EKI N + + G SD+ K +S + E M + D +RP
Sbjct: 156 -----DEKIQNSDDEERAQG---SDEDKLQNS-------------DDDEKMQNTDDEERP 194
Query: 712 KTCEQNTQLNSIENYLNKDNEGFKCKKSDQLKNEQDKQEDP---TNEKSQNYSQRR 764
+ + Q S E N D+E +D K D +E P EK QN R
Sbjct: 195 QLSDDERQQLSEEEKANSDDERPVASDNDDEKQNSDDEEQPQLSDEEKMQNSDDER 250
>gi|57232746 nuclear receptor interacting protein 1 [Homo sapiens]
Length = 1158
Score = 37.7 bits (86), Expect = 0.059
Identities = 48/243 (19%), Positives = 99/243 (40%), Gaps = 47/243 (19%)
Query: 559 LVPNKCFTSFKNNSKEKCSLKHQTRN-------QCQNNPSEIIQSTYQETQNKSSSLSTS 611
++P+ + NS E+ ++K N + Q P + ++ E + ST
Sbjct: 352 IIPSSPKNAGYKNSLERNNIKQAANNSLLLHLLKSQTIPKPMNGHSHSERGSIFEESSTP 411
Query: 612 SILSQHKENNLDLTSRFKEQEMSNGIDKQYSNCTTIDKQICTNKYKEKIINENYNPKFFG 671
+ + ++ +NN T + S+G + YSNC ID C ++
Sbjct: 412 TTIDEYSDNNPSFT------DDSSGDESSYSNCVPIDLS-CKHR---------------- 448
Query: 672 NLQSDDSKKNDSKIKVTVLEMSE-YLNKYESMSSNKDSKRPKTCEQNTQLNS------IE 724
++K++S V++ ++ LN ++ + D K + +N++LNS ++
Sbjct: 449 ------TEKSESDQPVSLDNFTQSLLNTWDPKVPDVDIKEDQDTSKNSKLNSHQKVTLLQ 502
Query: 725 NYLNKDNEGFKCKKSDQLKNEQDKQEDPTNEKSQNYSQRRSIKDCLSTCEQPKNTEVLRT 784
L NE + ++ + Q D + +QNY++ I+ + P +T L T
Sbjct: 503 LLLGHKNE----ENVEKNTSPQGVHNDVSKFNTQNYARTSVIESPSTNRTTPVSTPPLLT 558
Query: 785 TLK 787
+ K
Sbjct: 559 SSK 561
>gi|183396804 Regulation of nuclear pre-mRNA domain containing 2
[Homo sapiens]
Length = 1461
Score = 37.4 bits (85), Expect = 0.077
Identities = 89/432 (20%), Positives = 163/432 (37%), Gaps = 72/432 (16%)
Query: 514 SSVASKVFRSSYEDKNLLKKNKDESSVSISHTKCSLLGDISDGKNLVPNKCFTSFKNNSK 573
S ++F+ +ED+N+ + + T + + N PNK + + ++
Sbjct: 117 SKSVERIFKI-WEDRNVYPEEMIVALREALSTTFKTQKQLKENLNKQPNKQWKKSQTSTN 175
Query: 574 EKCSLKHQT----RNQCQNNPSEIIQSTYQETQNKSSSLSTSSI---------LSQHKEN 620
K +LK + R+Q + + + + + K LST + + K
Sbjct: 176 PKAALKSKIVAEFRSQALIEELLLYKRSEDQIELKEKQLSTMRVDVCSTETLKCLKDKTG 235
Query: 621 NLDLTSRFKE-----QEMSNGIDKQYSNCTTIDKQI------CTNKYKE-KIINENYNPK 668
+ F+E +E NG+DKQ N ++ + + +YKE K++ Y K
Sbjct: 236 GKKFSKEFEEASSKLEEFVNGLDKQVKNGPSLTEALENAGIFYEAQYKEVKVVANAY--K 293
Query: 669 FFGNLQSDDSKKNDSKIKVTVLEMSEY---------------------LNKYESMSSNKD 707
F N ++ KK D ++K T+ + E + ES S +
Sbjct: 294 TFANRVNNLKKKLD-QLKSTLPDPEESPVPSPSMDAPSPTGSESPFQGMGGEESQSPTME 352
Query: 708 SKRPKTCEQNTQLNSIENYLNKD--NEGFKCKKSDQLKNEQDKQEDPTN---EKSQNYSQ 762
S++ T E T +E+ D ++G K D+ + +K T+ + ++N S+
Sbjct: 353 SEKSATPEPVTDNRDVEDMELSDVEDDGSKIIVEDRKEKPAEKSAVSTSVPTKPTENISK 412
Query: 763 RRSIKDC-LSTCEQPKNTEVLRTTLKHSNVWRKHNFHSLD-------GTSTRAFHPQTGL 814
S ++ P + + T+L S N ++D +S + TG+
Sbjct: 413 ASSCTPVPVTMTATPPLPKPVNTSLSPSPALALPNLANVDLAKISSILSSLTSVMKNTGV 472
Query: 815 PLLSSPVPQRKTQSGCFDLDSSLLHLKSFSSRSPRPCLNIEDDPDIHEKPFLSS------ 868
S P P T +L S L ++ S P NI +I + LS+
Sbjct: 473 SPASRPSPGTPTSPS--NLTSGLKTPAPATTTSHNPLANILSKVEITPESILSALSKTQT 530
Query: 869 -SAPPITSLSLL 879
SAP + LS L
Sbjct: 531 QSAPALQGLSSL 542
>gi|116174746 sentrin/SUMO-specific protease 7 isoform 1 [Homo
sapiens]
Length = 1050
Score = 37.0 bits (84), Expect = 0.10
Identities = 61/300 (20%), Positives = 114/300 (38%), Gaps = 63/300 (21%)
Query: 536 DESSVSISHTKCSLLGDISDGKNLVPNK-CFTSFKNNSKEKC----SLKHQTRNQCQNNP 590
D ++ S G + +NL P+K C+ S + + + K S K N+ +
Sbjct: 192 DTDNLQSEQLSSSSDGSLESYQNLNPHKSCYLSERGSQRSKTVDDNSAKQTAHNKEKRRK 251
Query: 591 SEIIQSTYQETQNKSSSLSTSSI--LSQHKENN----------LDLTSRFKEQEMSNGI- 637
+ I +TQ + + + L Q N L L SR ++ + N +
Sbjct: 252 DDGISLLISDTQPEDLNSGSRGCDHLEQESRNKDVKYSDSKVELTLISRKTKRRLRNNLP 311
Query: 638 DKQYSNCTTIDKQICTNKYKE---------KIINENYN--PKFFGNLQSDDSKKNDSKIK 686
D QY CT++DK K +E + +ENY+ PK + + +K + +K+
Sbjct: 312 DSQY--CTSLDKSTEQTKKQEDDSTISTEFEKPSENYHQDPKLPEEITTKPTKSDFTKLS 369
Query: 687 VTVLEMSEYLNKYESMSSNKDSKRPKTC-------------EQNTQLNSIEN-------- 725
+ N +S S+ ++ + + +LN+IE
Sbjct: 370 SLNSQELTLSNATKSASAGSTTETVENSNSIDIVGISSLVEKDENELNTIEKPILRGHNE 429
Query: 726 -----------YLNKDNEGFKCKKSDQLKNEQDKQEDPTNEKSQNYSQRRSIKDCLSTCE 774
++ D EG KS ++ Q KQ+ T ++++ S+ ++ L TCE
Sbjct: 430 GNQSLISAEPIVVSSDEEGPVEHKSSEILKLQSKQDRETTNENESTSESALLELPLITCE 489
>gi|237858621 polyamine modulated factor 1 binding protein 1 isoform
b [Homo sapiens]
Length = 882
Score = 37.0 bits (84), Expect = 0.10
Identities = 68/389 (17%), Positives = 153/389 (39%), Gaps = 42/389 (10%)
Query: 432 PEFSSPEDTNEGKIRLKPETPRSETCISNDFYSHMPVGETNPLIGSLLQERQDVIA---R 488
P SS E + KI + + C+ + Y ++ V + + ++ +++++++ +
Sbjct: 149 PPSSSEECEDIKKILKHLQEQKDSQCLHVEEYQNL-VKDLRVELEAVSEQKRNIMKDMMK 207
Query: 489 IAQHLEHI-DPTASHIPRQSFNMHDSSSVASKVFRSSYEDKNL-LKKNKDESSVSISHTK 546
+ L + + T++HI R+ ++ ++ E + L LKK+K K
Sbjct: 208 LELDLHGLREETSAHIERKDKDITILQCRLQELQLEFTETQKLTLKKDK------FLQEK 261
Query: 547 CSLLGDISDGKNLVPNKCFTSFKNNSKEKC-------SLKHQTRNQCQNNPSEIIQSTYQ 599
+L ++ V N K K++C ++K +++ + + +Q+ Q
Sbjct: 262 DEMLQELEKKLTQVQNSLLKKEKELEKQQCMATELEMTVKEAKQDKSKEAECKALQAEVQ 321
Query: 600 ETQNKSSSLSTSSILSQHKENNLDLTSRFKEQEMSNGIDKQYSNCTTIDKQICTNKYKEK 659
+ +N L+ + ++ KE+ G + + + K + +K K
Sbjct: 322 KLKNSLEEAKQQERLAAQQ------AAQCKEEAALAGCHLEDTQ-RKLQKGLLLDKQKAD 374
Query: 660 IINENYNPKFFGNLQSDDSKK----NDSKIKVTVLEMSEYLNKYESMSSNKDSKRPKTCE 715
I E +S ++K N +++ LE+SE L K E+ K + E
Sbjct: 375 TIQELQRELQMLQKESSMAEKEQTSNRKRVEELSLELSEALRKLENSDKEKRQLQKTVAE 434
Query: 716 QNTQLNSIEN---YLNKDNEGFKCKKSDQLKNEQDKQEDPTNEKSQNYSQRRSIKDCLST 772
Q+ ++N + + + +++ KCK + L+ ED + ++ + ++ L
Sbjct: 435 QDMKMNDMLDRIKHQHREQGSIKCKLEEDLQEATKLLEDKREQLKKSKEHEKLMEGEL-- 492
Query: 773 CEQPKNTEVLRTTLKHSNVWRKHNFHSLD 801
E LR K + K N L+
Sbjct: 493 -------EALRQEFKKKDKTLKENSRKLE 514
>gi|237858619 polyamine modulated factor 1 binding protein 1 isoform
a [Homo sapiens]
Length = 1007
Score = 37.0 bits (84), Expect = 0.10
Identities = 68/389 (17%), Positives = 153/389 (39%), Gaps = 42/389 (10%)
Query: 432 PEFSSPEDTNEGKIRLKPETPRSETCISNDFYSHMPVGETNPLIGSLLQERQDVIA---R 488
P SS E + KI + + C+ + Y ++ V + + ++ +++++++ +
Sbjct: 294 PPSSSEECEDIKKILKHLQEQKDSQCLHVEEYQNL-VKDLRVELEAVSEQKRNIMKDMMK 352
Query: 489 IAQHLEHI-DPTASHIPRQSFNMHDSSSVASKVFRSSYEDKNL-LKKNKDESSVSISHTK 546
+ L + + T++HI R+ ++ ++ E + L LKK+K K
Sbjct: 353 LELDLHGLREETSAHIERKDKDITILQCRLQELQLEFTETQKLTLKKDK------FLQEK 406
Query: 547 CSLLGDISDGKNLVPNKCFTSFKNNSKEKC-------SLKHQTRNQCQNNPSEIIQSTYQ 599
+L ++ V N K K++C ++K +++ + + +Q+ Q
Sbjct: 407 DEMLQELEKKLTQVQNSLLKKEKELEKQQCMATELEMTVKEAKQDKSKEAECKALQAEVQ 466
Query: 600 ETQNKSSSLSTSSILSQHKENNLDLTSRFKEQEMSNGIDKQYSNCTTIDKQICTNKYKEK 659
+ +N L+ + ++ KE+ G + + + K + +K K
Sbjct: 467 KLKNSLEEAKQQERLAAQQ------AAQCKEEAALAGCHLEDTQ-RKLQKGLLLDKQKAD 519
Query: 660 IINENYNPKFFGNLQSDDSKK----NDSKIKVTVLEMSEYLNKYESMSSNKDSKRPKTCE 715
I E +S ++K N +++ LE+SE L K E+ K + E
Sbjct: 520 TIQELQRELQMLQKESSMAEKEQTSNRKRVEELSLELSEALRKLENSDKEKRQLQKTVAE 579
Query: 716 QNTQLNSIEN---YLNKDNEGFKCKKSDQLKNEQDKQEDPTNEKSQNYSQRRSIKDCLST 772
Q+ ++N + + + +++ KCK + L+ ED + ++ + ++ L
Sbjct: 580 QDMKMNDMLDRIKHQHREQGSIKCKLEEDLQEATKLLEDKREQLKKSKEHEKLMEGEL-- 637
Query: 773 CEQPKNTEVLRTTLKHSNVWRKHNFHSLD 801
E LR K + K N L+
Sbjct: 638 -------EALRQEFKKKDKTLKENSRKLE 659
>gi|158534055 round spermatid basic protein 1-like [Homo sapiens]
Length = 846
Score = 37.0 bits (84), Expect = 0.10
Identities = 43/164 (26%), Positives = 73/164 (44%), Gaps = 9/164 (5%)
Query: 560 VPNKCFTSFKNNSKEKCSLKHQTRNQCQNNPSEIIQSTYQETQNKSSSLSTSSILSQHKE 619
+P FK S CSL R + ++ + Q+T SS STSS+L H +
Sbjct: 667 IPRNVVHQFKTVSAV-CSLAWHIRLKLYHSEEDTSQNTATHETGTSSD-STSSVLGPHTD 724
Query: 620 NNLDLTSRFK-EQEMSNGIDKQYSNCTTIDKQICTNKYKEKIINENYNPKFFGNLQSDDS 678
N + S+ + S+ + +Y + I + + KE+ +N N P+ L + D
Sbjct: 725 NMICAVSKASLDSVFSDKLHSKYELQQIKHEPIASVRIKEEPVNVNI-PEKTTALNNMDG 783
Query: 679 KKNDSKIKVTVLEMSEYLNKYESM--SSNKDSKRPKTCEQNTQL 720
K + K K+ ++ +E+ +S +SNKD K + C N L
Sbjct: 784 K--NVKAKLDHVQFAEFKIDMDSKFENSNKDLKE-ELCPGNLSL 824
>gi|146133848 golgi autoantigen, golgin subfamily a, 6 [Homo
sapiens]
Length = 693
Score = 37.0 bits (84), Expect = 0.10
Identities = 64/372 (17%), Positives = 128/372 (34%), Gaps = 48/372 (12%)
Query: 431 SPEFSSPEDTNEGKIRLKPETPRSETCISNDFYSHMPVGETNPLIGSLLQERQDVIARIA 490
SP + T + K PET S C H P + L+ I+++
Sbjct: 37 SPGIPAGAKTKKKKTDSSPETTTSGGC-------HSPGDSQYQELAVALESSSVTISQLN 89
Query: 491 QHLEHIDPTASHIPRQSFNMHDSSSVASKVFRSSYEDKNLLKKNKDESSVSISHTKCSLL 550
+++E + + Q +++ K E N+L K + ++ HTK
Sbjct: 90 ENIESLKQQKKQVEHQLEEAKKTNNEIHKAQMERLETINILTLEKADLKTTLYHTK---- 145
Query: 551 GDISDGKNLVPNKCFTSFKNNSKEKCSLKHQTRNQCQNNPSEIIQSTYQETQNKSSSLST 610
+ F+ SK+ + + Q + + Q+ + SS
Sbjct: 146 ------------RAARHFEEESKDLAGRLQYSLQRIQELERALCAVSTQQQEEDRSSSCR 193
Query: 611 SSILSQHKENNLDLTSRFKEQEMSNGIDKQYSNCTTIDKQICTNKYKEKIINEN------ 664
++L + L KE+ + N Q + + Q+ ++Y + I E
Sbjct: 194 EAVLQRW------LQQTIKERALLNAHVTQVTE-SLKQVQLERDEYAKHIKGERARWQER 246
Query: 665 -YNPKFFGNLQSDDSKKNDSKIKVTVLEMSEYLNKYESMSSNKDSKRPKTCEQNTQLNSI 723
+ ++ K++ +I+ +SE N+ M+ P QL
Sbjct: 247 MWKMSVEARTLKEEKKRDIHRIQELERSLSELKNQ---MAEPPSLAPPAVTSVVEQLQDE 303
Query: 724 ENYLNKDNEGFKCKKSDQLKNEQ--------DKQEDPTNEKSQNYSQRRSIKDCLSTCEQ 775
+L ++ EG + K Q++N Q KQ E+ + + +++ CEQ
Sbjct: 304 AKHLRQEVEGLEGKLQSQVENNQALSLLSKEQKQRLQEQEEMLREQEAQRVREQERLCEQ 363
Query: 776 PKNTEVLRTTLK 787
+ + TL+
Sbjct: 364 NERLREQQKTLQ 375
>gi|38044112 restin isoform b [Homo sapiens]
Length = 1392
Score = 36.6 bits (83), Expect = 0.13
Identities = 75/378 (19%), Positives = 146/378 (38%), Gaps = 53/378 (14%)
Query: 392 SGRPFNTQESSSLHSKLFRVSQENENVGKGKEAFSMTFGSPEFSSPEDT----NEGKIRL 447
S R + +E +L +KL +V +E EN + + EDT E +I++
Sbjct: 637 SERAAHAKEMEALRAKLMKVIKEKENSLEAIRSKLDKAEDQHLVEMEDTLNKLQEAEIKV 696
Query: 448 KPETPRSETC-----ISNDFYSHMPVGETNPLIGSLLQ----ERQDVIARIAQHLEHIDP 498
K C + ++F S + E L L+ E + + ++ Q LE +
Sbjct: 697 KELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDALRKASSEGKSEMKKLRQQLEAAEK 756
Query: 499 TASHIPRQSFNMHDSSSVASKVFRSSYEDKNLLKKNKDESSVSISHTKCSLLGDISDGKN 558
H+ + SS AS + R + + L N E+ +S K +L ++ K
Sbjct: 757 QIKHL---EIEKNAESSKASSITRE-LQGRELKLTNLQENLSEVSQVKETLEKELQILKE 812
Query: 559 LVPNKCFTSFKNNSKEKCSLKHQTRNQCQNNPSEIIQSTYQETQNKSSSLSTSSILSQHK 618
F S+E S+ Q + E + +Q+ + + SS L + +
Sbjct: 813 --------KFAEASEEAVSV--------QRSMQETVNKLHQKEEQFNM---LSSDLEKLR 853
Query: 619 ENNLDLTSRFKEQEMSNGIDKQYSNCTTIDKQICTNKYKEKIINENYN-PKFFGNLQSDD 677
EN D+ ++F+E++ +++ K KEK+ N+ K G+ S
Sbjct: 854 ENLADMEAKFREKD---------------EREEQLIKAKEKLENDIAEIMKMSGDNSSQL 898
Query: 678 SKKNDSKIKVTVLEMSEYLNKYESMSSNKDSKRPKTCEQNTQLNSIENYLNKDNEGFKCK 737
+K ND ++++ ++ E K + N + + + + K +E K +
Sbjct: 899 TKMND-ELRLKERDVEELQLKLTKANENASFLQKSIEDMTVKAEQSQQEAAKKHEEEKKE 957
Query: 738 KSDQLKNEQDKQEDPTNE 755
+L + + K E N+
Sbjct: 958 LERKLSDLEKKMETSHNQ 975
>gi|4506751 restin isoform a [Homo sapiens]
Length = 1427
Score = 36.6 bits (83), Expect = 0.13
Identities = 75/378 (19%), Positives = 146/378 (38%), Gaps = 53/378 (14%)
Query: 392 SGRPFNTQESSSLHSKLFRVSQENENVGKGKEAFSMTFGSPEFSSPEDT----NEGKIRL 447
S R + +E +L +KL +V +E EN + + EDT E +I++
Sbjct: 672 SERAAHAKEMEALRAKLMKVIKEKENSLEAIRSKLDKAEDQHLVEMEDTLNKLQEAEIKV 731
Query: 448 KPETPRSETC-----ISNDFYSHMPVGETNPLIGSLLQ----ERQDVIARIAQHLEHIDP 498
K C + ++F S + E L L+ E + + ++ Q LE +
Sbjct: 732 KELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDALRKASSEGKSEMKKLRQQLEAAEK 791
Query: 499 TASHIPRQSFNMHDSSSVASKVFRSSYEDKNLLKKNKDESSVSISHTKCSLLGDISDGKN 558
H+ + SS AS + R + + L N E+ +S K +L ++ K
Sbjct: 792 QIKHL---EIEKNAESSKASSITRE-LQGRELKLTNLQENLSEVSQVKETLEKELQILKE 847
Query: 559 LVPNKCFTSFKNNSKEKCSLKHQTRNQCQNNPSEIIQSTYQETQNKSSSLSTSSILSQHK 618
F S+E S+ Q + E + +Q+ + + SS L + +
Sbjct: 848 --------KFAEASEEAVSV--------QRSMQETVNKLHQKEEQFNM---LSSDLEKLR 888
Query: 619 ENNLDLTSRFKEQEMSNGIDKQYSNCTTIDKQICTNKYKEKIINENYN-PKFFGNLQSDD 677
EN D+ ++F+E++ +++ K KEK+ N+ K G+ S
Sbjct: 889 ENLADMEAKFREKD---------------EREEQLIKAKEKLENDIAEIMKMSGDNSSQL 933
Query: 678 SKKNDSKIKVTVLEMSEYLNKYESMSSNKDSKRPKTCEQNTQLNSIENYLNKDNEGFKCK 737
+K ND ++++ ++ E K + N + + + + K +E K +
Sbjct: 934 TKMND-ELRLKERDVEELQLKLTKANENASFLQKSIEDMTVKAEQSQQEAAKKHEEEKKE 992
Query: 738 KSDQLKNEQDKQEDPTNE 755
+L + + K E N+
Sbjct: 993 LERKLSDLEKKMETSHNQ 1010
>gi|27436910 partner and localizer of BRCA2 [Homo sapiens]
Length = 1186
Score = 36.2 bits (82), Expect = 0.17
Identities = 49/209 (23%), Positives = 75/209 (35%), Gaps = 37/209 (17%)
Query: 490 AQHLEHIDPTASHIPRQSFNMHDSSSVASKVFRSSYEDKNLLKKNKDESSVSISHTKCSL 549
+QHLEHI P S HD ++ F S + KK + + + S
Sbjct: 259 SQHLEHIPPKGS----SELTTHDLKNIR---FTSPVSLEAQGKKMTVSTDNLLVNKAISK 311
Query: 550 LGDISDGKNLVPNKCFTSFKNNSKEKCSLKHQTRNQC----------QNNPSEIIQSTYQ 599
G + NL N CSL T N QN + ++S
Sbjct: 312 SGQLPTSSNLEANI-----------SCSLNELTYNNLPANENQNLKEQNQTEKSLKSPSD 360
Query: 600 ETQNKSSSLSTSSILSQHKENNLDLTSRFKEQEMSNGIDK------QYSNCTTIDKQICT 653
++ +L S ILSQ K +L+ TS ++ S + + +Y TT C
Sbjct: 361 TLDGRNENLQESEILSQPKSLSLEATSPLSAEKHSCTVPEGLLFPAEYYVRTTRSMSNCQ 420
Query: 654 NKYKEKIINENY---NPKFFGNLQSDDSK 679
K + + +++ K F N D SK
Sbjct: 421 RKVAVEAVIQSHLDVKKKGFKNKNKDASK 449
>gi|68508961 centromere protein C 1 [Homo sapiens]
Length = 943
Score = 36.2 bits (82), Expect = 0.17
Identities = 83/395 (21%), Positives = 152/395 (38%), Gaps = 67/395 (16%)
Query: 449 PETPRSETCISNDFYS------HMPVGETNPLIGSLLQERQDVIARIAQHLEHIDPTASH 502
P++ + + ND +S ++ VG + L+ + Q+VI AQ E ++
Sbjct: 131 PDSKKISSRNINDHHSEADEEFYLSVGSPSVLLDAKTSVSQNVIPSSAQKRE------TY 184
Query: 503 IPRQSFNMHDSS---SVASKVFRSSYEDKNLLKKNKDESSVSISHTKC----------SL 549
S NM SS SV +K R +++DK +LKK + ++ VS K S
Sbjct: 185 TFENSVNMLPSSTEVSVKTKK-RLNFDDKVMLKKIEIDNKVSDEEDKTSEGQERKPSGSS 243
Query: 550 LGDISDGKNLVPNKCFTSF--------KNNSKEKCSLKHQTR---NQCQNNPSEIIQSTY 598
I D + + + SF K S+ ++H + C + +++I+ +
Sbjct: 244 QNRIRDSEYEIQRQAKKSFSTLFLETVKRKSESSPIVRHAATAPPHSCPPDDTKLIEDEF 303
Query: 599 QETQNKSSSLSTSSILSQHKENNLD--LTSRFKEQEMSNGIDKQYSNCTTIDKQICTNKY 656
++ S S S I K +L S + + G + + + K + +K+
Sbjct: 304 IIDESDQSFASRSWITIPRKAGSLKQRTISPAESTALLQGRKSREKHHNILPKTLANDKH 363
Query: 657 KEKIINENYNPKFFGNLQSDDSKKNDSKIKVTVLEMSEYLN-KYESMSSNKDSKRPKTCE 715
K P Q D D+ + ++ Y + KYE S K++++P +
Sbjct: 364 SHK-------PHPVETSQPSDKTVLDTSYALIGETVNNYRSTKYEMYS--KNAEKPSRSK 414
Query: 716 QNTQLNSIENYLNKDNEGFKCKKSDQLKNEQDKQED-PTNEKSQNYSQRRSIK------- 767
+ + ++ K E +QL Q K E+ T+ +Q+ QR S +
Sbjct: 415 RTIKQKQRRKFMAKPAE-------EQLDVGQSKDENIHTSHITQDEFQRNSDRNMEEHEE 467
Query: 768 ---DCLSTCEQPKNTEVLRTTLKHSNVWRKHNFHS 799
DC+S + P +T K +K F S
Sbjct: 468 MGNDCVSKKQMPPVGSKKSSTRKDKEESKKKRFSS 502
>gi|42560244 peptidylprolyl isomerase G [Homo sapiens]
Length = 754
Score = 36.2 bits (82), Expect = 0.17
Identities = 30/130 (23%), Positives = 57/130 (43%), Gaps = 9/130 (6%)
Query: 654 NKYKEKIINENYNPK---FFGNLQSDDSKKNDSKIKVTVLEMSEYLNKYESMSSNKDSKR 710
N+ ++K+ + N K N + DD KN K+K S +K +S S +DSK
Sbjct: 420 NEKEKKVKDHKSNSKERDIRRNSEKDDKYKN--KVKKRAKSKSRSKSKEKSKSKERDSKH 477
Query: 711 PKTCEQNTQLNSIENYLNKDNEGFKCKKSDQLKNEQDKQEDPTNEKSQNYSQRRSIKDCL 770
+ E+ + S +D+E K K+ +D++ + EKS+ + + D
Sbjct: 478 NRNEEKRMRSRS----KGRDHENVKEKEKQSDSKGKDQERSRSKEKSKQLESKSNEHDHS 533
Query: 771 STCEQPKNTE 780
+ E+ + +
Sbjct: 534 KSKEKDRRAQ 543
Score = 30.4 bits (67), Expect = 9.4
Identities = 64/303 (21%), Positives = 119/303 (39%), Gaps = 56/303 (18%)
Query: 511 HDSSSVASKVFRSSYED---KNLLKKNKDESSVSISHTKCSLLGDIS------------- 554
H S+S + R+S +D KN +KK S S S K S
Sbjct: 429 HKSNSKERDIRRNSEKDDKYKNKVKKRAKSKSRSKSKEKSKSKERDSKHNRNEEKRMRSR 488
Query: 555 ----DGKNLVPNKCFTSFKNNSKEKCSLKHQTRNQCQNNPSEIIQSTYQETQNKSSSLST 610
D +N+ + + K +E+ K +++ Q ++ +E S +E ++ S S
Sbjct: 489 SKGRDHENVKEKEKQSDSKGKDQERSRSKEKSK-QLESKSNEHDHSKSKEKDRRAQSRSR 547
Query: 611 SSILSQHKENNLDLTSRFKEQEMSNGIDKQYSNCTTIDKQICTNKYKEKIINENYNPKFF 670
+++ K + SR +E+ S ++ + T D+ +K + + Y +
Sbjct: 548 ECDITKGKHS---YNSRTRERSRSRDRSRRVRS-RTHDRDRSRSKEYHRYREQEYRRRGR 603
Query: 671 ----------GNLQSDDSKKN--DSKIKVTVLEMSEYLNKYESMSS-------NKDSKR- 710
G +S D ++ DS+ S +KY + S N +S++
Sbjct: 604 SRSRERRTPPGRSRSKDRRRRRRDSRSSEREESQSRNKDKYRNQESKSSHRKENSESEKR 663
Query: 711 --PKTCEQNTQLNSIENYLNKDNEGF-KCKKSDQ--------LKNEQDKQEDPTNEKSQN 759
K+ + N+ NS E ++D F K K+S Q LKN++D++ + EK
Sbjct: 664 MYSKSRDHNSSNNSREKKADRDQSPFSKIKQSSQDNELKSSMLKNKEDEKIRSSVEKENQ 723
Query: 760 YSQ 762
S+
Sbjct: 724 KSK 726
>gi|130484567 HFM1 protein [Homo sapiens]
Length = 1435
Score = 36.2 bits (82), Expect = 0.17
Identities = 47/250 (18%), Positives = 105/250 (42%), Gaps = 23/250 (9%)
Query: 537 ESSVSISHTKCSLLGDISDGKNLVPNKCFTSFKNNSKEKCSLKHQTRNQCQNNPSEIIQS 596
+S ISH+K S + I+ PNK T+ K +C+ ++++ C ++ +I +
Sbjct: 1109 KSETQISHSKHSDISTIAG-----PNKGTTASKKPGNRECNHLCKSKHTCGHDCCKIGVA 1163
Query: 597 TYQETQNKSSSLSTSSILSQHKENNLDLTSRFK-EQEMSNGID-KQYS-----NCTTIDK 649
E + + S S + +++ +++ R K + S +D K++ + +I +
Sbjct: 1164 QKSEIKESTISSYLSDLRNRNAVSSVPPVKRLKIQMNKSQSVDLKEFGFTPKPSLPSISR 1223
Query: 650 QICTNKYKEKIINENYNPKFFGNLQSDDSKKNDSKIKVTVLEM-SEYLNKYESMSSNKDS 708
N + I+ + P+ +G ++ + S+ D ++ E+ +E + ++ N +
Sbjct: 1224 SEYLNISELPIMEQWDQPEIYGKVRQEPSEYQDKEVLNVNFELGNEVWDDFD--DENLEV 1281
Query: 709 KRPKTCEQNTQLNSIENYLNKDNEGFKCKKSDQLKNEQDKQEDPTNEKSQNYSQRRSIKD 768
T + T+++ N L+ G K Q+ + E S ++ + D
Sbjct: 1282 TSFSTDTEKTKISGFGNTLSSSTRGSKLPL-------QESKSKFQREMSNSFVSSHEMSD 1334
Query: 769 -CLSTCEQPK 777
LS PK
Sbjct: 1335 ISLSNSAMPK 1344
>gi|38788333 remodeling and spacing factor 1 [Homo sapiens]
Length = 1441
Score = 35.8 bits (81), Expect = 0.22
Identities = 42/177 (23%), Positives = 74/177 (41%), Gaps = 20/177 (11%)
Query: 570 NNSKEKCSLKHQTRNQCQNNPSEIIQSTYQETQNKSSSLSTSSILSQHKENNLDLTSRFK 629
N+S+E SL+ + + + P Q +E++ S + ++ N L+ T+ K
Sbjct: 222 NSSRESPSLEDEETKKEEETPK---QEEQKESEKMKSEEQPMDLENRSTANVLEETTVKK 278
Query: 630 EQEMSNGIDKQYSNCTTIDKQICTNKYKEKIINENYNPKFFGNLQSDDSKKNDSKIKVTV 689
E+E + K ++K + N+ K KII E +SD K+N IKV V
Sbjct: 279 EKEDEKELVK-LPVIVKLEKPLPENEEK-KIIKE----------ESDSFKENVKPIKVEV 326
Query: 690 LEMSEYLNKYESMSSNKDSKRPKTCEQNTQLNSIENYLNKDNEGFKCKKSDQLKNEQ 746
E +S ++ P+ E + S K E ++++LKN+Q
Sbjct: 327 KECRADPKDTKSSMEKPVAQEPERIEFGGNIKSSHEITEKSTE-----ETEKLKNDQ 378
>gi|55770834 centromere protein F [Homo sapiens]
Length = 3114
Score = 35.8 bits (81), Expect = 0.22
Identities = 38/207 (18%), Positives = 79/207 (38%), Gaps = 17/207 (8%)
Query: 581 QTRNQCQNNPSEIIQSTYQETQNKSSSLSTSSILSQHKENNLDLTSRFKEQEMSNGIDKQ 640
Q++N + E++QS+Y+ +N+ + K N + ++EM K
Sbjct: 2573 QSKNASLQDTLEVLQSSYKNLENELELTKMDKMSFVEKVNKMTAKETELQREMHEMAQK- 2631
Query: 641 YSNCTTIDKQICTNKYKEKIINENYNPKFFGNLQ--SDDSKKNDSKIKVTVLEMSEYLNK 698
T + +E++ E + G LQ ++ K + ++K LE SE
Sbjct: 2632 ------------TAELQEELSGE--KNRLAGELQLLLEEIKSSKDQLKELTLENSELKKS 2677
Query: 699 YESMSSNKDSKRPKTCEQNTQLNSIENYLNKDNEGFKCKKSDQLKNEQDKQEDPTNEKSQ 758
+ M ++ K K E+ + + K ++ + Q + E + K +
Sbjct: 2678 LDCMHKDQVEKEGKVREEIAEYQLRLHEAEKKHQALLLDTNKQYEVEIQTYREKLTSKEE 2737
Query: 759 NYSQRRSIKDCLSTCEQPKNTEVLRTT 785
S ++ D L + ++ N + TT
Sbjct: 2738 CLSSQKLEIDLLKSSKEELNNSLKATT 2764
Score = 33.9 bits (76), Expect = 0.85
Identities = 49/248 (19%), Positives = 97/248 (39%), Gaps = 21/248 (8%)
Query: 536 DESSVSISHTKCSLLGDISDGKNLVPNKCFTSFKNNSKEKCSLKHQTRNQCQNNPSEIIQ 595
++ S+ ++C L D S + + S + + + + + + QC+ I+
Sbjct: 803 EQGSMPSERSECRLEADQSPKNSAILQNRVDSLEFSLESQKQMNSDLQKQCEELVQ--IK 860
Query: 596 STYQETQNKSSSLSTSSILSQHKENNLDLTSRFKEQEMSNGIDKQYSNCTTIDKQICTNK 655
+E K+ + S + + S+ +E + + N NK
Sbjct: 861 GEIEENLMKAEQMHQSFVAETSQR-----ISKLQEDTSA------HQNVVAETLSALENK 909
Query: 656 YKE-KIINENYNPKF--FGNLQSDDSKKNDSKIKVTVLEMSEYLNKYESMSSNKDSKRP- 711
KE +++N+ + L+ + DS ++ +L + L K E S +KR
Sbjct: 910 EKELQLLNDKVETEQAEIQELKKSNHLLEDSLKELQLLSETLSLEKKEMSSIISLNKREI 969
Query: 712 -KTCEQNTQLNSIENYLNKDNEGFKCKKSDQLKNEQDKQEDPTNEKSQNYSQRRSIKDCL 770
+ ++N L I LN++ +KS+ N D++E +E S Y Q + I L
Sbjct: 970 EELTQENGTLKEINASLNQEKMNL-IQKSESFANYIDEREKSISELSDQYKQEKLI--LL 1026
Query: 771 STCEQPKN 778
CE+ N
Sbjct: 1027 QRCEETGN 1034
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.129 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,733,629
Number of Sequences: 37866
Number of extensions: 2014357
Number of successful extensions: 5231
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 117
Number of HSP's that attempted gapping in prelim test: 5090
Number of HSP's gapped (non-prelim): 269
length of query: 1076
length of database: 18,247,518
effective HSP length: 113
effective length of query: 963
effective length of database: 13,968,660
effective search space: 13451819580
effective search space used: 13451819580
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.