CLIP1 26733

Name: CLIP1	Sequence: fasta or formatted (1392aa)		NCBI GI: 38044112
Description: restin isoform b		Referenced in: Cytoskeleton Dynein and Dynactin mTOR Pathway
Other entries for this name: alt prot [1427aa] restin isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.1 113 3 C cysteine 0.9 13 1 D aspartate 4.9 68 2 E glutamate 13.9 193 3 F phenylalanine 2.0 28 1 G glycine 3.5 49 2 H histidine 1.8 25 2 I isoleucine 3.3 46 1 K lysine 10.6 148 3 L leucine 10.8 150 2 M methionine 2.4 33 2 N asparagine 4.1 57 2 P proline 2.4 34 2 Q glutamine 6.2 87 2 R arginine 4.6 64 3 S serine 8.7 121 4 T threonine 6.0 84 2 V valine 4.7 65 2 W tryptophan 0.4 5 1 Y tyrosine 0.6 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 restin isoform b CLIP1 0.993 restin isoform a CLIP2 0.288 CAP-GLY domain containing linker protein 2 isoform 2... CLIP2 0.281 CAP-GLY domain containing linker protein 2 isoform ... MYH10 0.064 myosin, heavy polypeptide 10, non-muscle CENPE 0.059 centromere protein E MYH1 0.057 myosin, heavy chain 1, skeletal muscle, adult [Homo... MYH13 0.056 myosin, heavy polypeptide 13, skeletal muscle [Homo... EEA1 0.056 early endosome antigen 1, 162kD CLIP3 0.056 CAP-GLY domain containing linker protein 3 CLIP4 0.056 CAP-GLY domain containing linker protein family, mem... MYH4 0.056 myosin, heavy polypeptide 4, skeletal muscle GOLGB1 0.056 golgi autoantigen, golgin subfamily b, macrogolgin ... DSP 0.055 desmoplakin isoform I CCDC88A 0.055 coiled-coil domain containing 88A isoform 2 PLEC1 0.055 plectin 1 isoform 11 PLEC1 0.055 plectin 1 isoform 10 PLEC1 0.055 plectin 1 isoform 8 PLEC1 0.055 plectin 1 isoform 7 PLEC1 0.055 plectin 1 isoform 6 PLEC1 0.055 plectin 1 isoform 3 PLEC1 0.055 plectin 1 isoform 2 PLEC1 0.055 plectin 1 isoform 1 MYH7B 0.055 myosin, heavy polypeptide 7B, cardiac muscle, beta ... MYH7 0.055 myosin, heavy chain 7, cardiac muscle, beta MYH11 0.055 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.055 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.055 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.055 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... MYH3 0.055 myosin, heavy chain 3, skeletal muscle, embryonic [H... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.