Guide to the Human Genome
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Name: SENP7 Sequence: fasta or formatted (1050aa) NCBI GI: 116174746
Description:

sentrin/SUMO-specific protease 7 isoform 1

Referenced in:

Ubiquitin and Related Protein Modifications

Other entries for this name:
alt prot [985aa] sentrin/SUMO-specific protease 7 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.5         26           2
 C cysteine            1.8         19           1
 D aspartate           5.4         57           2
 E glutamate           8.6         90           2
 F phenylalanine       3.0         31           2
 G glycine             3.0         31           2
 H histidine           2.3         24           1
 I isoleucine          5.4         57           2
 K lysine              8.2         86           2
 L leucine            10.5        110           2
 M methionine          1.2         13           1
 N asparagine          5.3         56           2
 P proline             4.7         49           4
 Q glutamine           5.0         53           3
 R arginine            4.8         50           2
 S serine             13.1        138           4
 T threonine           6.3         66           2
 V valine              5.4         57           2
 W tryptophan          1.1         12           1
 Y tyrosine            2.4         25           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sentrin/SUMO-specific protease 7 isoform 1 
SENP7                 0.849   sentrin/SUMO-specific protease 7 isoform 2 
SENP6                 0.089   SUMO1/sentrin specific peptidase 6 isoform 1 
SENP6                 0.089   SUMO1/sentrin specific peptidase 6 isoform 2 
SENP1                 0.020   sentrin/SUMO-specific protease 1 
SENP2                 0.018   SUMO1/sentrin/SMT3 specific protease 2 
SENP5                 0.016   SUMO1/sentrin specific peptidase 5 
SENP3                 0.013   SUMO1/sentrin/SMT3 specific protease 3 
DSPP                  0.012   dentin sialophosphoprotein preproprotein 
RIF1                  0.012   RAP1 interacting factor 1 
CYLC1                 0.012   cylicin, basic protein of sperm head cytoskeleton 1...
ATRX                  0.012   transcriptional regulator ATRX isoform 2 
ATRX                  0.012   transcriptional regulator ATRX isoform 1 
GOLGA4                0.011   golgi autoantigen, golgin subfamily a, 4 
LOC729792             0.009   PREDICTED: hypothetical protein 
LOC729792             0.009   PREDICTED: hypothetical protein 
LOC729792             0.009   PREDICTED: hypothetical protein 
LOC100294501          0.009   PREDICTED: hypothetical protein 
LOC100294238          0.009   PREDICTED: hypothetical protein 
LOC100294204          0.009   PREDICTED: hypothetical protein 
LOC100294136          0.009   PREDICTED: hypothetical protein 
LOC100294091          0.009   PREDICTED: hypothetical protein 
LOC730401             0.009   PREDICTED: hypothetical protein 
LOC100294249          0.009   PREDICTED: hypothetical protein XP_002344067 
THOC2                 0.009   THO complex 2 
RAI14                 0.009   retinoic acid induced 14 isoform d 
RAI14                 0.009   retinoic acid induced 14 isoform c 
RAI14                 0.009   retinoic acid induced 14 isoform b 
RAI14                 0.009   retinoic acid induced 14 isoform a 
RAI14                 0.009   retinoic acid induced 14 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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